Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0002434

Physical Location & Seq

Genomic Coordinates Forward (+)

74294401 .. 74298135

Gene Structure 3735 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG515500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2181 bp

ATGGAGGGTTTTGAGGGGCTCGTTGTGAACTCGCCAACGCAACATAAATCGGGTGCTAGAGATCTGTTCTCAATTCTGACAGGCTATGTTGTGAGCGCTGTTGTGATTGGCTTTGTTGTGCCTCGCTTCCTGTCCAGTATGCCGTTCTTGGGAAAGAAAAGCAAGCAAAGAGGAGTTCCTGTGGAAGTTGGTGGGGAGGAAGGTTACGCAATACGCAATGCTCAAGCATCTGAGTTAATCGAGTCTCCTCATAGAGATGCCACAACCGTCGCAGCCTTGTTTGAGCAAACTTGTAACAAGCATTCGCAGAATCGATTTCTTGGAACTAGGAAGTTTATTGGAAGGGAGTTTGTCAAAGCTGGTGATGGCAGCAAATTAGAGAAACTTCACTTGGGAGATTATGAATGGCAGACTTATGGACAAGTCTTTGTTCGTGCTTGCAACTTTGCATCGGGGCTTATCAAACTAGGTCATGAGGTGGATACCCGTGCTGCAATTTTTGGTGACACCCGGGCGGAGTGGTTTATAGCCTTTCAGGGATGCTTCCGCCAGAATATTACTGTTGTTACTATTTATTCTTCCCTAGGTGAGGATGCCCTGATTCACTCGCTTAATGAGACTGAAGTATCAACATTGATCTGTGATTCCAAGCAGCTGACAAAGATGACTTCCATAAGCTCAAGCCTAAATACCATTAAAAATGTTATTTATTTTGAAGATGAAGGAATTTCAGATGCTAATGAATGTGGAAGTTACAGCAATTGGACAGTTACATCCTTTTCTGAAGTTGAGAAGCTTGGACAAAAAAACCCTGCTCATCCAAGATTACCTTCTAAGAATGACATTGCTGCTATCATGTATACGAGTGGCAGTACAGGTCTACCAAAGGGAGTCGTTATAACTCATGGCAATGTCGTAGCCTCTACTGCAGCTATTACGATAGTGCTTCCAAGACTGTACAGCACTGATGTATACATTGCATACTTGCCCTTAGCTCATGTTTTCGAACTGGTCGCTGAGTCTGTGGTGATGGCTGCAGGTTGTCAAATTGGTTATGGTTCAGCATTGACTTTAACAGACACTTCAAGTAAAATTAAGAAAGGAACCAAGGGAGATGTTTCTGTGTTAAAACCGACTCTCATGGCAACAGTTCCTGCTATTATAGATCGTATTCGAGATGCAGTTCATAATAAGGTTGAGGAGAAAGGGGGCATAGCAAAGAATCTTTTCAACATTGGGTTTAAACGGCGACTGGCTGCTGTAGAAGGAAGCTGGTTTGGTGCTTGGGGTCTGGAAAGAATGTTTTGGGATAATATTGTTTTCAAAAACATACGTCAAGTATTCGGAGGGCGCATTCGGTACAGCATCTGTAGTGGAGCTCCTCTATCAACTGATTCACAACGATTCATCAATATCTGCATGGGTGCTCCAGTCGGCCAAGCATATGGCATTACAGAAACATTTGCTGCAGTTACAGTGTCCGAGAAAGATGACACTACAGTGGGACGTGTTGGCCCGCCCCTGCAATCTTGCTACATTAAGCTTGTTTCTTGGAAAGATGGTGGATACTTGACATCTGACAAGCCCATGCCTCGGGGCGAGATTGTAGTTGGCGGACCCTCTGTAACTGCTGGCTACTTTAAAAATCAAGAGAAGACTGATGAGGTTTACAAGGTAGACGAAAAAGGCATGCGTTGGTTTTATACTGGTGACATTGGAAGGTTTCATCCTGATGGATGCCTTGAAATTATAGATAGGAAGAAGGATATTGTTAAACTCCAGCATGGAGAGTACATCTCCCTCGGAAAGATCGAGGCAGCATTGATAAGCAGTAACTATGTGGAAAAAGTTATGGCATTTGCAGATCCCTACCACAGTTACTGCATAGCTCTAGTTGTCCCTGTGCGTCAAGAACTCGAGAAGTGGGCTCAGGAAGCTGGAATAAATTACAATGATTTTTCAGAGCTGTGTGGAAAAAATGAAGCAGTTAGTGAGGTTCAGCAATCCCTCTACAAGGTGGCGAAAGCAGTAAAATTGGACAAGTACGAAATTCCTAGAAAGATTTATTTGGCACCTGATCCATGGACACCCGAATCCGGATTGGTTACCGCTGCTCTCAAGATCAGGAGGGAACAGATCAAGTCCAAGTTCAAAAGTGAGATCGAGAAGTTGTATGCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001676 GO:0003674 GO:0003824 GO:0004467 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0006082 GO:0006629 GO:0006631 GO:0008150 GO:0008152 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0012505 GO:0015645 GO:0016405 GO:0016874 GO:0016877 GO:0016878 GO:0019752 GO:0031967 GO:0031975 GO:0032787 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0071704

KEGG Pathways

Metabolic & Signaling

ko00061 ko00071 ko01100 ko01212 ko02024 ko03320 ko04146 ko04216 ko04714 ko04920 map00061 map00071 map01100 map01212 map02024 map03320 map04146 map04216 map04714 map04920

Pfam Domains

Protein Families

AMP-binding

Protein Analysis

726

Amino Acids

80.03

Weight (kDa)

8.24

Isoelectric Point (pI)

30.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	130 - 547	2e-79	AMP-binding enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002434)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G04350 AT2G04350
fragaria_vesca	FvH4_6g40470 FvH4_6g40470 FvH4_6g40470 FvH4_6g40470 FvH4_6g40470 FvH4_6g40470 FvH4_6g40470 FvH4_6g40470
malus_domestica	MD09G1129700.v1.1 MD17G1118500.v1.1
prunus_persica	Prupe.3G195600_v2.0.a1 Prupe.3G195600_v2.0.a1 Prupe.3G195600_v2.0.a1 Prupe.3G195600_v2.0.a1
pyrus_communis	pycom09g05270 pycom17g10890
rosa_chinensis	RchiOBHm_Chr2g0155701 RchiOBHm_Chr2g0155721
rosa_laevigata	RLG00000020855 RLG00000020857 RLG00000020858
rosa_multiflora	Rmu_co8272995.1_g000001 Rmu_co8427559.1_g000001 Rmu_sc0002712.1_g000001 Rmu_sc0011953.1_g000003 Rmu_sc0011953.1_g000015
rosa_roxburghii	Rroxscaffold_2G00093540
rosa_rugosa	Rorug02G0449500
rosa_samantha	Rh2AG515400 Rh2AG515500 Rh2BG526400 Rh2BG526500 Rh2CG500300 Rh2CG500500 Rh2DG535300 Rh2DG535500
rosa_wichuraiana	Rw2G042360 Rw2G042370 Rw2G042390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	899
Acc36I	ACCTGC	1 cut(s)	1028
AccB1I	GGYRCC	1 cut(s)	2071
AccI	GTMKAC	4 cut(s)	860, 880, 972, 1677
AccIII	TCCGGA	1 cut(s)	2096
AciI	CCGC	5 cut(s)	515, 547, 1517, 1614, 2109
AclWI	GGATC	2 cut(s)	1859, 2072
AcoI	YGGCCR	1 cut(s)	1435
AcsI	RAATTY	2 cut(s)	726, 2049
AcuI	CTGAAG	2 cut(s)	642, 804
AfaI	GTAC	5 cut(s)	874, 959, 1361, 1793, 2045
AfeI	AGCGCT	1 cut(s)	97
AfiI	CCNNNNNNNGG	5 cut(s)	149, 589, 1593, 2014, 2096
AflIII	ACRYGT	1 cut(s)	1507
AgsI	TTSAA	6 cut(s)	716, 1086, 1231, 1324, 1745, 2152
AjiI	CACGTC	1 cut(s)	1508
AjuI	GAANNNNNNNTTGG	4 cut(s)	374, 406, 814, 846
AleI	CACNNNNGTG	1 cut(s)	1499
Alw21I	GWGCWC	2 cut(s)	1381, 1429
Alw26I	GTCTC	2 cut(s)	249, 611
AlwI	GGATC	2 cut(s)	1859, 2072
AlwNI	CAGNNNCTG	3 cut(s)	1154, 1368, 1881
Ama87I	CYCGRG	3 cut(s)	510, 1593, 1916
Aor13HI	TCCGGA	1 cut(s)	2096
Aor51HI	AGCGCT	1 cut(s)	97
AoxI	GGCC	2 cut(s)	1435, 1513
ApoI	RAATTY	2 cut(s)	726, 2049
Asp700I	GAANNNNTTC	1 cut(s)	1226
AspA2I	CCTAGG	1 cut(s)	583
AspLEI	GCGC	2 cut(s)	98, 1353
AspS9I	GGNCC	2 cut(s)	1514, 1616
AsuC2I	CCSGG	2 cut(s)	511, 512
AsuHPI	GGTGA	5 cut(s)	374, 515, 599, 1039, 1721
AsuII	TTCGAA	1 cut(s)	1005
AvaI	CYCGRG	3 cut(s)	510, 1593, 1916
AvaII	GGWCC	1 cut(s)	1616
AvrII	CCTAGG	1 cut(s)	583
BaeI	ACNNNNGTAYC	2 cut(s)	609, 642
BanI	GGYRCC	1 cut(s)	2071
BanII	GRGCYC	3 cut(s)	21, 1381, 1930
BbsI	GAAGAC	1 cut(s)	1661
Bbv12I	GWGCWC	2 cut(s)	1381, 1429
BccI	CCATC	4 cut(s)	359, 1024, 1553, 1727
BceAI	ACGGC	2 cut(s)	127, 1262
BciVI	GTATCC	2 cut(s)	475, 1559
BcnI	CCSGG	2 cut(s)	511, 512
BcoDI	GTCTC	2 cut(s)	249, 611
BfaI	CTAG	6 cut(s)	57, 327, 467, 584, 1892, 2055
BfmI	CTRYAG	6 cut(s)	927, 1035, 1260, 1369, 1467, 1497
BfoI	RGCGCY	1 cut(s)	99
BfuAI	ACCTGC	1 cut(s)	1028
BfuI	GTATCC	2 cut(s)	475, 1559
BglII	AGATCT	1 cut(s)	61
BlnI	CCTAGG	1 cut(s)	583
Bme1390I	CCNGG	2 cut(s)	511, 512
Bme18I	GGWCC	1 cut(s)	1616
BmeT110I	CYCGRG	3 cut(s)	510, 1593, 1916
BmgBI	CACGTC	1 cut(s)	1508
BmgT120I	GGNCC	2 cut(s)	1514, 1616
BmiI	GGNNCC	3 cut(s)	1105, 1618, 2073
BmrFI	CCNGG	2 cut(s)	511, 512
BmsI	GCATC	9 cut(s)	236, 247, 458, 530, 583, 724, 1168, 1374, 1727
BpiI	GAAGAC	1 cut(s)	1661
BplI	GAGNNNNNCTC	2 cut(s)	1781, 1813
BpmI	CTGGAG	2 cut(s)	1413, 1763
Bpu10I	CCTNAGC	2 cut(s)	991, 1929
Bpu14I	TTCGAA	1 cut(s)	1005
BpuEI	CTTGAG	3 cut(s)	207, 664, 2102
BpuMI	CCSGG	2 cut(s)	511, 512
Bsa29I	ATCGAT	1 cut(s)	313
BsaJI	CCNNGG	6 cut(s)	510, 583, 1107, 1592, 1801, 2081
BsaWI	WCCGGW	1 cut(s)	2096
BsaXI	ACNNNNNCTCC	2 cut(s)	165, 195
Bsc4I	CCNNNNNNNGG	5 cut(s)	149, 589, 1593, 2014, 2096
Bse1I	ACTGG	5 cut(s)	135, 1014, 1257, 1430, 1711
Bse3DI	GCAATG	4 cut(s)	223, 843, 916, 975
BseAI	TCCGGA	1 cut(s)	2096
BseCI	ATCGAT	1 cut(s)	313
BseDI	CCNNGG	6 cut(s)	510, 583, 1107, 1592, 1801, 2081
BseGI	GGATG	6 cut(s)	545, 598, 773, 817, 1726, 1742
BseLI	CCNNNNNNNGG	5 cut(s)	149, 589, 1593, 2014, 2096
BseMI	GCAATG	4 cut(s)	223, 843, 916, 975
BseMII	CTCAG	3 cut(s)	222, 1008, 1943
BseNI	ACTGG	5 cut(s)	135, 1014, 1257, 1430, 1711
BseRI	GAGGAG	4 cut(s)	186, 237, 1214, 1371
BshFI	GGCC	2 cut(s)	1437, 1515
BshNI	GGYRCC	1 cut(s)	2071
BshVI	ATCGAT	1 cut(s)	313
BsiHKAI	GWGCWC	2 cut(s)	1381, 1429
BsiHKCI	CYCGRG	3 cut(s)	510, 1593, 1916
BsiSI	CCGG	2 cut(s)	511, 2097
BslFI	GGGAC	2 cut(s)	1518, 1883
BslI	CCNNNNNNNGG	5 cut(s)	149, 589, 1593, 2014, 2096
BsmAI	GTCTC	2 cut(s)	249, 611
BsmFI	GGGAC	2 cut(s)	1518, 1883
BsmI	GAATGC	2 cut(s)	301, 1353
BsnI	GGCC	2 cut(s)	1437, 1515
BsoBI	CYCGRG	3 cut(s)	510, 1593, 1916
Bsp119I	TTCGAA	1 cut(s)	1005
Bsp1286I	GDGCHC	4 cut(s)	21, 1381, 1429, 1930
Bsp13I	TCCGGA	1 cut(s)	2096
Bsp1407I	TGTACA	1 cut(s)	957
Bsp143I	GATC	9 cut(s)	61, 636, 1165, 1809, 1864, 2077, 2121, 2136, 2160
Bsp19I	CCATGG	1 cut(s)	2081
BspACI	CCGC	5 cut(s)	515, 547, 1517, 1614, 2109
BspANI	GGCC	2 cut(s)	1437, 1515
BspCNI	CTCAG	3 cut(s)	223, 1009, 1942
BspDI	ATCGAT	1 cut(s)	313
BspEI	TCCGGA	1 cut(s)	2096
BspHI	TCATGA	1 cut(s)	472
BspLI	GGNNCC	3 cut(s)	1105, 1618, 2073
BspMAI	CTGCAG	3 cut(s)	931, 1039, 1471
BspMI	ACCTGC	1 cut(s)	1028
BspPI	GGATC	2 cut(s)	1859, 2072
BspT104I	TTCGAA	1 cut(s)	1005
BspT107I	GGYRCC	1 cut(s)	2071
BsrDI	GCAATG	4 cut(s)	223, 843, 916, 975
BsrGI	TGTACA	1 cut(s)	957
BsrI	ACTGG	5 cut(s)	135, 1014, 1257, 1430, 1711
BssECI	CCNNGG	6 cut(s)	510, 583, 1107, 1592, 1801, 2081
BssMI	GATC	9 cut(s)	61, 636, 1165, 1809, 1864, 2077, 2121, 2136, 2160
BssNAI	GTATAC	2 cut(s)	861, 973
BssT1I	CCWWGG	3 cut(s)	583, 1107, 2081
Bst1107I	GTATAC	2 cut(s)	861, 973
Bst4CI	ACNGT	8 cut(s)	268, 562, 769, 957, 1150, 1477, 1501, 1877
BstAUI	TGTACA	1 cut(s)	957
BstBI	TTCGAA	1 cut(s)	1005
BstC8I	GCNNGC	5 cut(s)	164, 439, 1517, 1633, 1691
BstDEI	CTNAG	5 cut(s)	231, 834, 991, 1017, 1929
BstDSI	CCRYGG	1 cut(s)	2081
BstEII	GGTNACC	1 cut(s)	2104
BstENI	CCTNNNNNAGG	2 cut(s)	587, 2012
BstF5I	GGATG	6 cut(s)	545, 598, 773, 817, 1726, 1742
BstH2I	RGCGCY	1 cut(s)	99
BstHHI	GCGC	2 cut(s)	98, 1353
BstKTI	GATC	9 cut(s)	64, 639, 1168, 1812, 1867, 2080, 2124, 2139, 2163
BstMAI	GTCTC	2 cut(s)	249, 611
BstMBI	GATC	9 cut(s)	61, 636, 1165, 1809, 1864, 2077, 2121, 2136, 2160
BstMWI	GCNNNNNNNGC	2 cut(s)	926, 1934
BstNSI	RCATGY	1 cut(s)	1693
BstPI	GGTNACC	1 cut(s)	2104
BstSCI	CCNGG	2 cut(s)	509, 510
BstSFI	CTRYAG	6 cut(s)	927, 1035, 1260, 1369, 1467, 1497
BstV2I	GAAGAC	1 cut(s)	1661
BstX2I	RGATCY	2 cut(s)	61, 1864
BstXI	CCANNNNNNTGG	1 cut(s)	1445
BstYI	RGATCY	2 cut(s)	61, 1864
BstZ17I	GTATAC	2 cut(s)	861, 973
Bsu15I	ATCGAT	1 cut(s)	313
BsuI	GTATCC	2 cut(s)	475, 1559
BsuRI	GGCC	2 cut(s)	1437, 1515
BsuTUI	ATCGAT	1 cut(s)	313
BtgI	CCRYGG	1 cut(s)	2081
BtrI	CACGTC	1 cut(s)	1508
BtsCI	GGATG	6 cut(s)	545, 598, 773, 817, 1726, 1742
BtsIMutI	CAGTG	3 cut(s)	963, 1482, 1506
BveI	ACCTGC	1 cut(s)	1028
Cac8I	GCNNGC	5 cut(s)	164, 439, 1517, 1633, 1691
CaiI	CAGNNNCTG	3 cut(s)	1154, 1368, 1881
CciI	TCATGA	1 cut(s)	472
CfoI	GCGC	2 cut(s)	98, 1353
Cfr13I	GGNCC	2 cut(s)	1514, 1616
Cfr9I	CCCGGG	1 cut(s)	510
ClaI	ATCGAT	1 cut(s)	313
CseI	GACGC	1 cut(s)	1895
Csp6I	GTAC	5 cut(s)	873, 958, 1360, 1792, 2044
CviQI	GTAC	5 cut(s)	873, 958, 1360, 1792, 2044
DdeI	CTNAG	5 cut(s)	231, 834, 991, 1017, 1929
DpnI	GATC	9 cut(s)	63, 638, 1167, 1811, 1866, 2079, 2123, 2138, 2162
DpnII	GATC	9 cut(s)	61, 636, 1165, 1809, 1864, 2077, 2121, 2136, 2160
DraI	TTTAAA	2 cut(s)	1243, 1642
EaeI	YGGCCR	1 cut(s)	1435
EciI	GGCGGA	3 cut(s)	530, 536, 1629
Ecl136II	GAGCTC	1 cut(s)	1379
Eco130I	CCWWGG	3 cut(s)	583, 1107, 2081
Eco24I	GRGCYC	3 cut(s)	21, 1381, 1930
Eco47I	GGWCC	1 cut(s)	1616
Eco47III	AGCGCT	1 cut(s)	97
Eco53kI	GAGCTC	1 cut(s)	1379
Eco57I	CTGAAG	2 cut(s)	642, 804
Eco88I	CYCGRG	3 cut(s)	510, 1593, 1916
Eco91I	GGTNACC	1 cut(s)	2104
EcoICRI	GAGCTC	1 cut(s)	1379
EcoNI	CCTNNNNNAGG	2 cut(s)	587, 2012
EcoO65I	GGTNACC	1 cut(s)	2104
EcoT14I	CCWWGG	3 cut(s)	583, 1107, 2081
EcoT38I	GRGCYC	3 cut(s)	21, 1381, 1930
ErhI	CCWWGG	3 cut(s)	583, 1107, 2081
FalI	AAGNNNNNCTT	2 cut(s)	814, 846
FaqI	GGGAC	2 cut(s)	1518, 1883
FauI	CCCGC	1 cut(s)	1524
FauNDI	CATATG	1 cut(s)	1444
FblI	GTMKAC	4 cut(s)	860, 880, 972, 1677
FokI	GGATG	6 cut(s)	552, 605, 760, 804, 1713, 1749
FriOI	GRGCYC	3 cut(s)	21, 1381, 1930
FspBI	CTAG	6 cut(s)	57, 327, 467, 584, 1892, 2055
GlaI	GCGC	2 cut(s)	97, 1352
GsuI	CTGGAG	2 cut(s)	1413, 1763
HaeII	RGCGCY	1 cut(s)	99
HaeIII	GGCC	2 cut(s)	1437, 1515
HapII	CCGG	2 cut(s)	511, 2097
HgaI	GACGC	1 cut(s)	1895
HhaI	GCGC	2 cut(s)	98, 1353
Hin6I	GCGC	2 cut(s)	96, 1351
HinP1I	GCGC	2 cut(s)	96, 1351
HindIII	AAGCTT	2 cut(s)	794, 1541
HpaII	CCGG	2 cut(s)	511, 2097
HphI	GGTGA	5 cut(s)	374, 515, 599, 1039, 1721
Hpy166II	GTNNAC	6 cut(s)	28, 861, 881, 973, 1669, 1678
Hpy188I	TCNGA	9 cut(s)	78, 232, 733, 784, 1346, 1483, 1579, 1805, 1963
Hpy8I	GTNNAC	6 cut(s)	28, 861, 881, 973, 1669, 1678
Hpy99I	CGWCG	1 cut(s)	272
HpyAV	CCTTC	7 cut(s)	194, 336, 716, 840, 1259, 1713, 1756
HpyCH4III	ACNGT	8 cut(s)	268, 562, 769, 957, 1150, 1477, 1501, 1877
HpyCH4IV	ACGT	2 cut(s)	1333, 1507
HpyF10VI	GCNNNNNNNGC	2 cut(s)	926, 1934
HpyF3I	CTNAG	5 cut(s)	231, 834, 991, 1017, 1929
HpySE526I	ACGT	2 cut(s)	1333, 1507
HspAI	GCGC	2 cut(s)	96, 1351
Kpn2I	TCCGGA	1 cut(s)	2096
Kzo9I	GATC	9 cut(s)	61, 636, 1165, 1809, 1864, 2077, 2121, 2136, 2160
LmnI	GCTCC	3 cut(s)	1376, 1384, 1432
LweI	GCATC	9 cut(s)	236, 247, 458, 530, 583, 724, 1168, 1374, 1727
MaeI	CTAG	6 cut(s)	57, 327, 467, 584, 1892, 2055
MaeII	ACGT	2 cut(s)	1333, 1507
MalI	GATC	9 cut(s)	63, 638, 1167, 1811, 1866, 2079, 2123, 2138, 2162
MboI	GATC	9 cut(s)	61, 636, 1165, 1809, 1864, 2077, 2121, 2136, 2160
MboII	GAAGA	4 cut(s)	570, 728, 1666, 1771
MfeI	CAATTG	1 cut(s)	760
MflI	RGATCY	2 cut(s)	61, 1864
MhlI	GDGCHC	4 cut(s)	21, 1381, 1429, 1930
MlyI	GAGTC	4 cut(s)	251, 900, 1028, 1129
MroI	TCCGGA	1 cut(s)	2096
MroXI	GAANNNNTTC	1 cut(s)	1226
MslI	CAYNNNNRTG	4 cut(s)	255, 909, 1499, 1731
MspA1I	CMGCKG	2 cut(s)	655, 2111
MspI	CCGG	2 cut(s)	511, 2097
MspR9I	CCNGG	2 cut(s)	511, 512
MssI	GTTTAAAC	1 cut(s)	1243
MunI	CAATTG	1 cut(s)	760
Mva1269I	GAATGC	2 cut(s)	301, 1353
MwoI	GCNNNNNNNGC	2 cut(s)	926, 1934
NciI	CCSGG	2 cut(s)	511, 512
NcoI	CCATGG	1 cut(s)	2081
NdeI	CATATG	1 cut(s)	1444
NdeII	GATC	9 cut(s)	61, 636, 1165, 1809, 1864, 2077, 2121, 2136, 2160
NlaIV	GGNNCC	3 cut(s)	1105, 1618, 2073
NmuCI	GTSAC	2 cut(s)	503, 1709
NspI	RCATGY	1 cut(s)	1693
NspV	TTCGAA	1 cut(s)	1005
OliI	CACNNNNGTG	1 cut(s)	1499
PaeI	GCATGC	1 cut(s)	1693
PaeR7I	CTCGAG	1 cut(s)	1916
PagI	TCATGA	1 cut(s)	472
PcsI	WCGNNNNNNNCGW	1 cut(s)	1809
PctI	GAATGC	2 cut(s)	301, 1353
PdmI	GAANNNNTTC	1 cut(s)	1226
PfeI	GAWTC	7 cut(s)	310, 601, 644, 1222, 1394, 1404, 2093
PleI	GAGTC	4 cut(s)	250, 899, 1027, 1129
PmeI	GTTTAAAC	1 cut(s)	1243
PpsI	GAGTC	4 cut(s)	250, 899, 1027, 1129
PsiI	TTATAA	1 cut(s)	899
Psp124BI	GAGCTC	1 cut(s)	1381
PspEI	GGTNACC	1 cut(s)	2104
PspN4I	GGNNCC	3 cut(s)	1105, 1618, 2073
PspPI	GGNCC	2 cut(s)	1514, 1616
PstI	CTGCAG	3 cut(s)	931, 1039, 1471
PstNI	CAGNNNCTG	3 cut(s)	1154, 1368, 1881
PsuI	RGATCY	2 cut(s)	61, 1864
PvuII	CAGCTG	1 cut(s)	655
RsaI	GTAC	5 cut(s)	874, 959, 1361, 1793, 2045
RsaNI	GTAC	5 cut(s)	873, 958, 1360, 1792, 2044
RseI	CAYNNNNRTG	4 cut(s)	255, 909, 1499, 1731
SacI	GAGCTC	1 cut(s)	1381
Sau3AI	GATC	9 cut(s)	61, 636, 1165, 1809, 1864, 2077, 2121, 2136, 2160
Sau96I	GGNCC	2 cut(s)	1514, 1616
SchI	GAGTC	4 cut(s)	251, 900, 1028, 1129
ScrFI	CCNGG	2 cut(s)	511, 512
SduI	GDGCHC	4 cut(s)	21, 1381, 1429, 1930
SfaNI	GCATC	9 cut(s)	236, 247, 458, 530, 583, 724, 1168, 1374, 1727
SfcI	CTRYAG	6 cut(s)	927, 1035, 1260, 1369, 1467, 1497
Sfr274I	CTCGAG	1 cut(s)	1916
SfuI	TTCGAA	1 cut(s)	1005
SinI	GGWCC	1 cut(s)	1616
SlaI	CTCGAG	1 cut(s)	1916
SmaI	CCCGGG	1 cut(s)	512
SmiMI	CAYNNNNRTG	4 cut(s)	255, 909, 1499, 1731
SmlI	CTYRAG	4 cut(s)	222, 679, 1916, 2117
SmoI	CTYRAG	4 cut(s)	222, 679, 1916, 2117
SphI	GCATGC	1 cut(s)	1693
SsiI	CCGC	5 cut(s)	515, 547, 1517, 1614, 2109
SspI	AATATT	2 cut(s)	556, 1315
SspMI	CTAG	6 cut(s)	57, 327, 467, 584, 1892, 2055
SstI	GAGCTC	1 cut(s)	1381
StyD4I	CCNGG	2 cut(s)	509, 510
StyI	CCWWGG	3 cut(s)	583, 1107, 2081
TaaI	ACNGT	8 cut(s)	268, 562, 769, 957, 1150, 1477, 1501, 1877
TaiI	ACGT	2 cut(s)	1336, 1510
TaqI	TCGA	7 cut(s)	240, 313, 1005, 1174, 1812, 1917, 2163
TatI	WGTACW	3 cut(s)	872, 957, 1791
TfiI	GAWTC	7 cut(s)	310, 601, 644, 1222, 1394, 1404, 2093
TscAI	CASTG	3 cut(s)	970, 1482, 1506
TseFI	GTSAC	2 cut(s)	503, 1709
Tsp45I	GTSAC	2 cut(s)	503, 1709
TspDTI	ATGAA	7 cut(s)	417, 735, 756, 1175, 1396, 1715, 1995
TspMI	CCCGGG	1 cut(s)	510
TspRI	CASTG	3 cut(s)	970, 1482, 1506
VpaK11BI	GGWCC	1 cut(s)	1616
XagI	CCTNNNNNAGG	2 cut(s)	587, 2012
XapI	RAATTY	2 cut(s)	726, 2049
XceI	RCATGY	1 cut(s)	1693
XhoI	CTCGAG	1 cut(s)	1916
XmaI	CCCGGG	1 cut(s)	510
XmaJI	CCTAGG	1 cut(s)	583
XmiI	GTMKAC	4 cut(s)	860, 880, 972, 1677
XmnI	GAANNNNTTC	1 cut(s)	1226
XspI	CTAG	6 cut(s)	57, 327, 467, 584, 1892, 2055

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.