Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0002434

Physical Location & Seq

Genomic Coordinates Forward (+)

68736773 .. 68744964

Gene Structure 8192 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G042390.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2145 bp

ATGCAACATAATTCGGGTGCTAGTGATCTGTTCTCAATTCTGACAGGCTATGTTGTGAGCGCTGTTGTGATTGGCGCTGTTGTGCCTCGCTTCCTGTCCAGTATGCCGTTCCTGGGAAAGAAAATAAAGCAAAGAGGCGTTCCTGTGGAAGTTGGTGGGGAGGAAGGTTACGCAATACGCAATGCTCAAGCATCTGAGTTAATCGAGTCTCCTCATAAAGATGTCACAACCGTCGCAGCCTTGTTTGAGCAATCTTGTAACAAGCATTCACAGAATCGATTACTTGGAACTAGGAAGTTTATTGGAAGAGAGTTTGTCAAAGCTAGTGATGGCAGCAAATTAGAGAAACTTCACTTGGGAGATTATGAATGGCAGACTTATGGACAAGTCTTTGTTCGTGCTTGCAACTTTGCATCGGGGGTTATCAAACTAGATCATGATGTGGATACCCGTGCTGCAGTTTTTGGTGACACCCGGGCGGAGTGGTTTATAGCCTTTCAGGGATGCTTCCGCCAGAATATTACTGTTGTTACTATTTATTCTTCCCTAGGTGAGGATGCCCTGATTCACTCGCTTAACGAGGCTGAAGTATCAACATTGATCTGTGATTCCAAGCAACTGACAAAGATGACTTCCATAAGCTCAAGCCTAAATACCATTAAAAATGTTATTTATTTTGAAGATGAAGGAATTTCAGGTGCTAACGAATGTCAAACTTACAGCAATTGGACAGTTACATCGTTTTCTGAAGTTGAGAAGCTTGGACAAAAAAACCCTGTTCATCCAAGATTACCTTCTAAGAATGATATTGCTGCTATCATGTATACGAGTGGCAGTACAGGTCTACCAAAGGGAGTCGTTATAACTCATGGCAATGTCGTAGCCTCTACTGCAGCTATTACGATAGTGCTTCCAAGACTGTATAGCACTGATGTATACATTGCATACTTGCCCTTAGCTCATGTTTTCGAACTGGTCGCTGAGTCTGTGGCGATGGCTGCAGGTTGTCAAATTGGTTATGGTTCAGCATTGACTTTAACGGACACTTCAAATAAAATTAAGAAAGGAACCAAGGGAGATGTTTCTGTGTTAAAACCGACTTTCATGGCAACAGTTCCTGCTATTATAGATCGTATTCGAGATGCAGTTCATAATAAGGTTGAGGAGAAAGGGGGGATAGCAAAGAATCTTTTCAACATTGGGTTTAAACGGCGACTGGCTGCTGTAGAAGGAAGCTGGTTTGGTGCTTGGGGTCTGGAAAGAATGTTTTGGGATAATATTGTCTTCAAGGACATACGTCAAGTATTCGGAGGGCGCATTCGCTACAGCATCTGTAGTGGAGCTCCTTTATCAACTGATTCACAACGATTCATGAATATCTGCATGGGTGCTCCAGTCGGCCAAGCATATGGCTTGACAGAAACATTTGCCGCAGCTACGGTGTCCGAGAAGGATGACACTACAGTGGGACGTGTTGGCCCGCCCCTGCAATCTTGCTACATTAAGCTTCTTTCTTGGAAAGATGGTGGATACTTGACATCTGACAAGCCAATGCCTCGCGGCGAGATTGTAGTTGGCGGACCCTCTGTAACTGCTGGCTACTTTAAAAATCAAGAGAAGACTGATGAGGTTTACAAGGTCGACGAAAAAGGCATGCGTTGGTTTTATACTGGTGACATTGGAAGGTTTCATCCTGATGGATGCCTTGAAATTATAGATAGGAAGAAGGATATTGTTAAACTCCAGCATGGAGAGTACATCTCCCTCGGAAAGATTGAGGCAGCATTGATAAGCAGTAATTATGTGGAAAAAATCATGGCATTTGCAGATCCCTACCACAGTTACTGCATAGCTCTAGTTGTCCCTCTGCGTCAAGAAATCGAGAAGTGGGCTCAGGAAGTTGGAATAAATTACAATGATTTTTCAGAGCTGTGTGGAAAAAATGAAGCAGTTAGTGAGGTTCAGCAATCCCTCTACAAGGTGGCAAAAGCAGAGAAATTGGACAAGTATGAAATTCCTAAAAAGATTTATTTGGCACCTGATCCATGGACACCCGAATCCGGATTGGTTACTGCTGCTCTCAAGATCAGGAGGGAACAGATCAAGTCCAAGTTCAAAAGTGAGATGGAGAAGTTGTATGCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001676 GO:0003674 GO:0003824 GO:0004467 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0006082 GO:0006629 GO:0006631 GO:0008150 GO:0008152 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0012505 GO:0015645 GO:0016405 GO:0016874 GO:0016877 GO:0016878 GO:0019752 GO:0031967 GO:0031975 GO:0032787 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0071704

KEGG Pathways

Metabolic & Signaling

ko00061 ko00071 ko01100 ko01212 ko02024 ko03320 ko04146 ko04216 ko04714 ko04920 map00061 map00071 map01100 map01212 map02024 map03320 map04146 map04216 map04714 map04920

Pfam Domains

Protein Families

AMP-binding

Protein Analysis

714

Amino Acids

78.8

Weight (kDa)

7.84

Isoelectric Point (pI)

30.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	117 - 535	1.9e-77	AMP-binding enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Orthologous Genes (Group: OG0002434)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G04350 AT2G04350
fragaria_vesca	FvH4_6g40470 FvH4_6g40470 FvH4_6g40470 FvH4_6g40470 FvH4_6g40470 FvH4_6g40470 FvH4_6g40470 FvH4_6g40470
malus_domestica	MD09G1129700.v1.1 MD17G1118500.v1.1
prunus_persica	Prupe.3G195600_v2.0.a1 Prupe.3G195600_v2.0.a1 Prupe.3G195600_v2.0.a1 Prupe.3G195600_v2.0.a1
pyrus_communis	pycom09g05270 pycom17g10890
rosa_chinensis	RchiOBHm_Chr2g0155701 RchiOBHm_Chr2g0155721
rosa_laevigata	RLG00000020855 RLG00000020857 RLG00000020858
rosa_multiflora	Rmu_co8272995.1_g000001 Rmu_co8427559.1_g000001 Rmu_sc0002712.1_g000001 Rmu_sc0011953.1_g000003 Rmu_sc0011953.1_g000015
rosa_roxburghii	Rroxscaffold_2G00093540
rosa_rugosa	Rorug02G0449500
rosa_samantha	Rh2AG515400 Rh2AG515500 Rh2BG526400 Rh2BG526500 Rh2CG500300 Rh2CG500500 Rh2DG535300 Rh2DG535500
rosa_wichuraiana	Rw2G042360 Rw2G042370 Rw2G042390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	863
Acc36I	ACCTGC	1 cut(s)	992
AccB1I	GGYRCC	1 cut(s)	2035
AccI	GTMKAC	4 cut(s)	824, 844, 936, 1641
AccII	CGCG	1 cut(s)	1560
AccIII	TCCGGA	1 cut(s)	2060
AciI	CCGC	6 cut(s)	479, 511, 1431, 1481, 1560, 1578
AclWI	GGATC	2 cut(s)	1823, 2036
AcoI	YGGCCR	1 cut(s)	1399
AcsI	RAATTY	2 cut(s)	690, 2013
AcuI	CTGAAG	2 cut(s)	606, 768
AfaI	GTAC	2 cut(s)	838, 1757
AfeI	AGCGCT	1 cut(s)	61
AfiI	CCNNNNNNNGG	4 cut(s)	113, 553, 1978, 2060
AflIII	ACRYGT	1 cut(s)	1471
AgsI	TTSAA	6 cut(s)	680, 1050, 1195, 1288, 1709, 2116
AjiI	CACGTC	1 cut(s)	1472
AjnI	CCWGG	1 cut(s)	111
AjuI	GAANNNNNNNTTGG	4 cut(s)	338, 370, 778, 810
AleI	CACNNNNGTG	1 cut(s)	1463
Alw21I	GWGCWC	2 cut(s)	1345, 1393
Alw26I	GTCTC	1 cut(s)	213
AlwI	GGATC	2 cut(s)	1823, 2036
AlwNI	CAGNNNCTG	3 cut(s)	1118, 1332, 1845
Ama87I	CYCGRG	1 cut(s)	474
Aor13HI	TCCGGA	1 cut(s)	2060
Aor51HI	AGCGCT	1 cut(s)	61
AoxI	GGCC	2 cut(s)	1399, 1477
ApoI	RAATTY	2 cut(s)	690, 2013
Asp700I	GAANNNNTTC	1 cut(s)	1190
AspA2I	CCTAGG	1 cut(s)	547
AspLEI	GCGC	3 cut(s)	62, 77, 1317
AspS9I	GGNCC	2 cut(s)	1478, 1580
AsuC2I	CCSGG	2 cut(s)	475, 476
AsuHPI	GGTGA	3 cut(s)	479, 563, 1685
AsuII	TTCGAA	1 cut(s)	969
AvaI	CYCGRG	1 cut(s)	474
AvaII	GGWCC	1 cut(s)	1580
AvrII	CCTAGG	1 cut(s)	547
BanI	GGYRCC	1 cut(s)	2035
BanII	GRGCYC	2 cut(s)	1345, 1894
BbsI	GAAGAC	2 cut(s)	1276, 1625
Bbv12I	GWGCWC	2 cut(s)	1345, 1393
BccI	CCATC	5 cut(s)	323, 988, 1517, 1691, 2119
BceAI	ACGGC	2 cut(s)	91, 1226
BciT130I	CCWGG	1 cut(s)	113
BciVI	GTATCC	2 cut(s)	439, 1523
BcnI	CCSGG	2 cut(s)	475, 476
BcoDI	GTCTC	1 cut(s)	213
BfaI	CTAG	6 cut(s)	21, 291, 324, 431, 548, 1856
BfmI	CTRYAG	7 cut(s)	456, 891, 999, 1224, 1324, 1333, 1461
BfoI	RGCGCY	2 cut(s)	63, 78
BfuAI	ACCTGC	1 cut(s)	992
BfuI	GTATCC	2 cut(s)	439, 1523
BlnI	CCTAGG	1 cut(s)	547
Bme1390I	CCNGG	3 cut(s)	113, 475, 476
Bme18I	GGWCC	1 cut(s)	1580
BmeT110I	CYCGRG	1 cut(s)	474
BmgBI	CACGTC	1 cut(s)	1472
BmgT120I	GGNCC	2 cut(s)	1478, 1580
BmiI	GGNNCC	3 cut(s)	1069, 1582, 2037
BmrFI	CCNGG	3 cut(s)	113, 475, 476
BmsI	GCATC	7 cut(s)	200, 422, 494, 547, 1132, 1338, 1691
BoxI	GACNNNNGTC	1 cut(s)	1296
BpiI	GAAGAC	2 cut(s)	1276, 1625
BplI	GAGNNNNNCTC	2 cut(s)	1745, 1777
BpmI	CTGGAG	2 cut(s)	1377, 1727
Bpu10I	CCTNAGC	2 cut(s)	955, 1893
Bpu14I	TTCGAA	1 cut(s)	969
BpuEI	CTTGAG	3 cut(s)	171, 628, 2066
BpuMI	CCSGG	2 cut(s)	475, 476
Bsa29I	ATCGAT	1 cut(s)	277
BsaJI	CCNNGG	6 cut(s)	112, 474, 547, 1071, 1765, 2045
BsaWI	WCCGGW	1 cut(s)	2060
BsaXI	ACNNNNNCTCC	1 cut(s)	2120
Bsc4I	CCNNNNNNNGG	4 cut(s)	113, 553, 1978, 2060
Bse1I	ACTGG	5 cut(s)	99, 978, 1221, 1394, 1675
Bse3DI	GCAATG	3 cut(s)	187, 880, 939
BseAI	TCCGGA	1 cut(s)	2060
BseBI	CCWGG	1 cut(s)	113
BseCI	ATCGAT	1 cut(s)	277
BseDI	CCNNGG	6 cut(s)	112, 474, 547, 1071, 1765, 2045
BseGI	GGATG	6 cut(s)	509, 562, 781, 1459, 1690, 1706
BseLI	CCNNNNNNNGG	4 cut(s)	113, 553, 1978, 2060
BseMI	GCAATG	3 cut(s)	187, 880, 939
BseMII	CTCAG	3 cut(s)	186, 972, 1907
BseNI	ACTGG	5 cut(s)	99, 978, 1221, 1394, 1675
BseRI	GAGGAG	2 cut(s)	201, 1178
Bsh1236I	CGCG	1 cut(s)	1560
BshFI	GGCC	2 cut(s)	1401, 1479
BshNI	GGYRCC	1 cut(s)	2035
BshVI	ATCGAT	1 cut(s)	277
BsiHKAI	GWGCWC	2 cut(s)	1345, 1393
BsiHKCI	CYCGRG	1 cut(s)	474
BsiSI	CCGG	2 cut(s)	475, 2061
BslFI	GGGAC	2 cut(s)	1482, 1847
BslI	CCNNNNNNNGG	4 cut(s)	113, 553, 1978, 2060
BsmAI	GTCTC	1 cut(s)	213
BsmFI	GGGAC	2 cut(s)	1482, 1847
BsmI	GAATGC	2 cut(s)	265, 1317
BsnI	GGCC	2 cut(s)	1401, 1479
BsoBI	CYCGRG	1 cut(s)	474
Bsp119I	TTCGAA	1 cut(s)	969
Bsp1286I	GDGCHC	3 cut(s)	1345, 1393, 1894
Bsp13I	TCCGGA	1 cut(s)	2060
Bsp143I	GATC	8 cut(s)	25, 433, 600, 1129, 1828, 2041, 2085, 2100
Bsp19I	CCATGG	1 cut(s)	2045
BspACI	CCGC	6 cut(s)	479, 511, 1431, 1481, 1560, 1578
BspANI	GGCC	2 cut(s)	1401, 1479
BspCNI	CTCAG	3 cut(s)	187, 973, 1906
BspDI	ATCGAT	1 cut(s)	277
BspEI	TCCGGA	1 cut(s)	2060
BspFNI	CGCG	1 cut(s)	1560
BspHI	TCATGA	2 cut(s)	436, 1371
BspLI	GGNNCC	3 cut(s)	1069, 1582, 2037
BspMAI	CTGCAG	3 cut(s)	460, 895, 1003
BspMI	ACCTGC	1 cut(s)	992
BspPI	GGATC	2 cut(s)	1823, 2036
BspT104I	TTCGAA	1 cut(s)	969
BspT107I	GGYRCC	1 cut(s)	2035
BsrDI	GCAATG	3 cut(s)	187, 880, 939
BsrI	ACTGG	5 cut(s)	99, 978, 1221, 1394, 1675
BssECI	CCNNGG	6 cut(s)	112, 474, 547, 1071, 1765, 2045
BssMI	GATC	8 cut(s)	25, 433, 600, 1129, 1828, 2041, 2085, 2100
BssNAI	GTATAC	2 cut(s)	825, 937
BssT1I	CCWWGG	3 cut(s)	547, 1071, 2045
Bst1107I	GTATAC	2 cut(s)	825, 937
Bst2UI	CCWGG	1 cut(s)	113
Bst4CI	ACNGT	8 cut(s)	232, 526, 733, 921, 1114, 1441, 1465, 1841
Bst6I	CTCTTC	1 cut(s)	301
BstBI	TTCGAA	1 cut(s)	969
BstC8I	GCNNGC	4 cut(s)	403, 1481, 1597, 1655
BstDEI	CTNAG	5 cut(s)	195, 798, 955, 981, 1893
BstDSI	CCRYGG	1 cut(s)	2045
BstENI	CCTNNNNNAGG	2 cut(s)	551, 1976
BstF5I	GGATG	6 cut(s)	509, 562, 781, 1459, 1690, 1706
BstFNI	CGCG	1 cut(s)	1560
BstH2I	RGCGCY	2 cut(s)	63, 78
BstHHI	GCGC	3 cut(s)	62, 77, 1317
BstKTI	GATC	8 cut(s)	28, 436, 603, 1132, 1831, 2044, 2088, 2103
BstMAI	GTCTC	1 cut(s)	213
BstMBI	GATC	8 cut(s)	25, 433, 600, 1129, 1828, 2041, 2085, 2100
BstMWI	GCNNNNNNNGC	2 cut(s)	890, 998
BstNI	CCWGG	1 cut(s)	113
BstNSI	RCATGY	1 cut(s)	1657
BstPAI	GACNNNNGTC	1 cut(s)	1296
BstSCI	CCNGG	3 cut(s)	111, 473, 474
BstSFI	CTRYAG	7 cut(s)	456, 891, 999, 1224, 1324, 1333, 1461
BstUI	CGCG	1 cut(s)	1560
BstV2I	GAAGAC	2 cut(s)	1276, 1625
BstX2I	RGATCY	1 cut(s)	1828
BstXI	CCANNNNNNTGG	1 cut(s)	1409
BstYI	RGATCY	1 cut(s)	1828
BstZ17I	GTATAC	2 cut(s)	825, 937
Bsu15I	ATCGAT	1 cut(s)	277
BsuI	GTATCC	2 cut(s)	439, 1523
BsuRI	GGCC	2 cut(s)	1401, 1479
BsuTUI	ATCGAT	1 cut(s)	277
BtgI	CCRYGG	1 cut(s)	2045
BtgZI	GCGATG	1 cut(s)	1007
BtrI	CACGTC	1 cut(s)	1472
BtsCI	GGATG	6 cut(s)	509, 562, 781, 1459, 1690, 1706
BtsIMutI	CAGTG	2 cut(s)	927, 1470
BveI	ACCTGC	1 cut(s)	992
Cac8I	GCNNGC	4 cut(s)	403, 1481, 1597, 1655
CaiI	CAGNNNCTG	3 cut(s)	1118, 1332, 1845
CciI	TCATGA	2 cut(s)	436, 1371
CfoI	GCGC	3 cut(s)	62, 77, 1317
Cfr13I	GGNCC	2 cut(s)	1478, 1580
Cfr9I	CCCGGG	1 cut(s)	474
ClaI	ATCGAT	1 cut(s)	277
CseI	GACGC	1 cut(s)	1859
Csp6I	GTAC	2 cut(s)	837, 1756
CviQI	GTAC	2 cut(s)	837, 1756
DdeI	CTNAG	5 cut(s)	195, 798, 955, 981, 1893
DpnI	GATC	8 cut(s)	27, 435, 602, 1131, 1830, 2043, 2087, 2102
DpnII	GATC	8 cut(s)	25, 433, 600, 1129, 1828, 2041, 2085, 2100
DraI	TTTAAA	2 cut(s)	1207, 1606
EaeI	YGGCCR	1 cut(s)	1399
Eam1104I	CTCTTC	1 cut(s)	301
EarI	CTCTTC	1 cut(s)	301
EciI	GGCGGA	3 cut(s)	494, 500, 1593
Ecl136II	GAGCTC	1 cut(s)	1343
Eco130I	CCWWGG	3 cut(s)	547, 1071, 2045
Eco24I	GRGCYC	2 cut(s)	1345, 1894
Eco47I	GGWCC	1 cut(s)	1580
Eco47III	AGCGCT	1 cut(s)	61
Eco53kI	GAGCTC	1 cut(s)	1343
Eco57I	CTGAAG	2 cut(s)	606, 768
Eco88I	CYCGRG	1 cut(s)	474
EcoICRI	GAGCTC	1 cut(s)	1343
EcoNI	CCTNNNNNAGG	2 cut(s)	551, 1976
EcoRII	CCWGG	1 cut(s)	111
EcoT14I	CCWWGG	3 cut(s)	547, 1071, 2045
EcoT38I	GRGCYC	2 cut(s)	1345, 1894
ErhI	CCWWGG	3 cut(s)	547, 1071, 2045
FalI	AAGNNNNNCTT	2 cut(s)	778, 810
FaqI	GGGAC	2 cut(s)	1482, 1847
FauI	CCCGC	1 cut(s)	1488
FauNDI	CATATG	1 cut(s)	1408
FblI	GTMKAC	4 cut(s)	824, 844, 936, 1641
FokI	GGATG	6 cut(s)	516, 569, 768, 1466, 1677, 1713
FriOI	GRGCYC	2 cut(s)	1345, 1894
FspBI	CTAG	6 cut(s)	21, 291, 324, 431, 548, 1856
GlaI	GCGC	3 cut(s)	61, 76, 1316
GsuI	CTGGAG	2 cut(s)	1377, 1727
HaeII	RGCGCY	2 cut(s)	63, 78
HaeIII	GGCC	2 cut(s)	1401, 1479
HapII	CCGG	2 cut(s)	475, 2061
HgaI	GACGC	1 cut(s)	1859
HhaI	GCGC	3 cut(s)	62, 77, 1317
Hin6I	GCGC	3 cut(s)	60, 75, 1315
HinP1I	GCGC	3 cut(s)	60, 75, 1315
HincII	GTYRAC	1 cut(s)	1642
HindII	GTYRAC	1 cut(s)	1642
HindIII	AAGCTT	2 cut(s)	758, 1505
HpaII	CCGG	2 cut(s)	475, 2061
HphI	GGTGA	3 cut(s)	479, 563, 1685
Hpy166II	GTNNAC	5 cut(s)	825, 845, 937, 1633, 1642
Hpy188I	TCNGA	8 cut(s)	42, 196, 748, 1310, 1447, 1543, 1769, 1927
Hpy8I	GTNNAC	5 cut(s)	825, 845, 937, 1633, 1642
Hpy99I	CGWCG	2 cut(s)	236, 1646
HpyAV	CCTTC	7 cut(s)	158, 680, 804, 1223, 1444, 1677, 1720
HpyCH4III	ACNGT	8 cut(s)	232, 526, 733, 921, 1114, 1441, 1465, 1841
HpyCH4IV	ACGT	2 cut(s)	1297, 1471
HpyF10VI	GCNNNNNNNGC	2 cut(s)	890, 998
HpyF3I	CTNAG	5 cut(s)	195, 798, 955, 981, 1893
HpySE526I	ACGT	2 cut(s)	1297, 1471
HspAI	GCGC	3 cut(s)	60, 75, 1315
Kpn2I	TCCGGA	1 cut(s)	2060
Kzo9I	GATC	8 cut(s)	25, 433, 600, 1129, 1828, 2041, 2085, 2100
LmnI	GCTCC	3 cut(s)	1340, 1348, 1396
LweI	GCATC	7 cut(s)	200, 422, 494, 547, 1132, 1338, 1691
MaeI	CTAG	6 cut(s)	21, 291, 324, 431, 548, 1856
MaeII	ACGT	2 cut(s)	1297, 1471
MalI	GATC	8 cut(s)	27, 435, 602, 1131, 1830, 2043, 2087, 2102
MboI	GATC	8 cut(s)	25, 433, 600, 1129, 1828, 2041, 2085, 2100
MboII	GAAGA	6 cut(s)	318, 534, 692, 1276, 1630, 1735
MfeI	CAATTG	1 cut(s)	724
MflI	RGATCY	1 cut(s)	1828
MhlI	GDGCHC	3 cut(s)	1345, 1393, 1894
MlyI	GAGTC	3 cut(s)	215, 864, 992
MmeI	TCCRAC	1 cut(s)	1882
MroI	TCCGGA	1 cut(s)	2060
MroXI	GAANNNNTTC	1 cut(s)	1190
MslI	CAYNNNNRTG	4 cut(s)	219, 873, 1463, 1695
MspI	CCGG	2 cut(s)	475, 2061
MspR9I	CCNGG	3 cut(s)	113, 475, 476
MssI	GTTTAAAC	1 cut(s)	1207
MunI	CAATTG	1 cut(s)	724
Mva1269I	GAATGC	2 cut(s)	265, 1317
MvaI	CCWGG	1 cut(s)	113
MvnI	CGCG	1 cut(s)	1560
MwoI	GCNNNNNNNGC	2 cut(s)	890, 998
NciI	CCSGG	2 cut(s)	475, 476
NcoI	CCATGG	1 cut(s)	2045
NdeI	CATATG	1 cut(s)	1408
NdeII	GATC	8 cut(s)	25, 433, 600, 1129, 1828, 2041, 2085, 2100
NlaIV	GGNNCC	3 cut(s)	1069, 1582, 2037
NmuCI	GTSAC	3 cut(s)	223, 467, 1673
NspI	RCATGY	1 cut(s)	1657
NspV	TTCGAA	1 cut(s)	969
OliI	CACNNNNGTG	1 cut(s)	1463
PaeI	GCATGC	1 cut(s)	1657
PagI	TCATGA	2 cut(s)	436, 1371
PctI	GAATGC	2 cut(s)	265, 1317
PdmI	GAANNNNTTC	1 cut(s)	1190
PfeI	GAWTC	7 cut(s)	274, 565, 608, 1186, 1358, 1368, 2057
PleI	GAGTC	3 cut(s)	214, 863, 991
PmeI	GTTTAAAC	1 cut(s)	1207
PpsI	GAGTC	3 cut(s)	214, 863, 991
PshAI	GACNNNNGTC	1 cut(s)	1296
PsiI	TTATAA	1 cut(s)	863
Psp124BI	GAGCTC	1 cut(s)	1345
Psp6I	CCWGG	1 cut(s)	111
PspGI	CCWGG	1 cut(s)	111
PspN4I	GGNNCC	3 cut(s)	1069, 1582, 2037
PspPI	GGNCC	2 cut(s)	1478, 1580
PstI	CTGCAG	3 cut(s)	460, 895, 1003
PstNI	CAGNNNCTG	3 cut(s)	1118, 1332, 1845
PsuI	RGATCY	1 cut(s)	1828
RsaI	GTAC	2 cut(s)	838, 1757
RsaNI	GTAC	2 cut(s)	837, 1756
RseI	CAYNNNNRTG	4 cut(s)	219, 873, 1463, 1695
SacI	GAGCTC	1 cut(s)	1345
SalI	GTCGAC	1 cut(s)	1640
Sau3AI	GATC	8 cut(s)	25, 433, 600, 1129, 1828, 2041, 2085, 2100
Sau96I	GGNCC	2 cut(s)	1478, 1580
SchI	GAGTC	3 cut(s)	215, 864, 992
ScrFI	CCNGG	3 cut(s)	113, 475, 476
SduI	GDGCHC	3 cut(s)	1345, 1393, 1894
SfaNI	GCATC	7 cut(s)	200, 422, 494, 547, 1132, 1338, 1691
SfcI	CTRYAG	7 cut(s)	456, 891, 999, 1224, 1324, 1333, 1461
SfuI	TTCGAA	1 cut(s)	969
SinI	GGWCC	1 cut(s)	1580
SmaI	CCCGGG	1 cut(s)	476
SmiMI	CAYNNNNRTG	4 cut(s)	219, 873, 1463, 1695
SmlI	CTYRAG	3 cut(s)	186, 643, 2081
SmoI	CTYRAG	3 cut(s)	186, 643, 2081
SphI	GCATGC	1 cut(s)	1657
SsiI	CCGC	6 cut(s)	479, 511, 1431, 1481, 1560, 1578
SspI	AATATT	2 cut(s)	520, 1279
SspMI	CTAG	6 cut(s)	21, 291, 324, 431, 548, 1856
SstI	GAGCTC	1 cut(s)	1345
StyD4I	CCNGG	3 cut(s)	111, 473, 474
StyI	CCWWGG	3 cut(s)	547, 1071, 2045
TaaI	ACNGT	8 cut(s)	232, 526, 733, 921, 1114, 1441, 1465, 1841
TaiI	ACGT	2 cut(s)	1300, 1474
TaqI	TCGA	6 cut(s)	204, 277, 969, 1138, 1641, 1881
TatI	WGTACW	2 cut(s)	836, 1755
TauI	GCSGC	2 cut(s)	1433, 1563
TfiI	GAWTC	7 cut(s)	274, 565, 608, 1186, 1358, 1368, 2057
TscAI	CASTG	2 cut(s)	934, 1470
TseFI	GTSAC	3 cut(s)	223, 467, 1673
Tsp45I	GTSAC	3 cut(s)	223, 467, 1673
TspGWI	ACGGA	1 cut(s)	1055
TspMI	CCCGGG	1 cut(s)	474
TspRI	CASTG	2 cut(s)	934, 1470
VpaK11BI	GGWCC	1 cut(s)	1580
XagI	CCTNNNNNAGG	2 cut(s)	551, 1976
XapI	RAATTY	2 cut(s)	690, 2013
XceI	RCATGY	1 cut(s)	1657
XmaI	CCCGGG	1 cut(s)	474
XmaJI	CCTAGG	1 cut(s)	547
XmiI	GTMKAC	4 cut(s)	824, 844, 936, 1641
XmnI	GAANNNNTTC	1 cut(s)	1190
XspI	CTAG	6 cut(s)	21, 291, 324, 431, 548, 1856

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.