Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0002434

Physical Location & Seq

Genomic Coordinates Forward (+)

76574454 .. 76578203

Gene Structure 3750 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG535500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1734 bp

ATGGAGGGTTTTGAGGGGCTCGTTGTGAACTCGCCAACGCAACATAAATCGGGTGCTAGAGATCTGTTCTCAATTCTGACAGGCTATGTTGTGAGCGCTGTTGTGATTGGCTTTGTTGTGCCTCGCTTCCTGTCCAGTATGCGGTTCTTGGGAAAGAAAAGCAAGCAAAGAGGAGTTCCTGTGGAAGTTGGTGGGGAGGAAGGTTACGCAATACGCAATGCTCAAGCATCTGAGTTAATCGAGTCTCCTCATAGAGACGCCACAACCGTCGCAGCCTTGTTTGAGCAATCTTGTAACAAGCATTCGCAGAATCGATTTCTTGGAACTAGGAAGTTTATTGGAAGGGAGCTTGTCAAAGCTAGTGATGGCAGCAAATTAGAGAAACTTCACTTGGGAGATTATGAATGGCAGACTTATGGACAAGTCTTTGTTCGTGCTTGCAACTTTGCATCGGGGCTTATCAAACTAGGTCATGATGTGGATACCCGTGCTGCAATTTTTGGTGACACCCGGGCGGAGTGGTTTATAGCCTTTCAGGGATGCTTCCGCCAGAATATTACTGTTGTTACTATTTATTCTTCCCTAGGTGAGGATGCCCTGATTCACTCGCTTAATGAGACTGAAGTATCAACATTGATCTGTGATTCCAAGCAGCTGACAAAGATGACTTCCATAAGCTCAAGCCTAAATACCATTAAAAATGTTATTTATTTTGAAGATGAAGGAATTTCAGATGCTAACGAATGTCGAAGTTACAGGAATTGGACAGTTACATCCTTTTCTGAAGTTGAGAAGCTTGGACAAAAAAATCCTGCTCATCCAAGATTACCTTCTAAGAATGACATTGCTGCTATCATGTATACGAGTGGCAGTACAGGTCTACCAAAGGGAGTCGTTATAACTCATGGCAATGTCGTAGCCTCTACTGCAGCTATTACGATAGTGCTTCCAAGACTGTATAGCACTGATGTATACATTGCATACTTGCCCTTAGCTCATGTTTTTGAACTGGTCGCTGAGTCTGTGTTGATGGCTGCAGGTTGTCAAATTGGTTATGGTTCAGCATTGACTTTAACGGACACTTCAAATAAAATTAAGGAAGGAACCAAGGGAGATGTTTCTGTGTTAAAACCGACTCTCATGGCAACAGTTCCTGCTATTATAGATCGTATTCGAGATGCAGTTCATAATAAGGTTGAGGAGAAAGGGGGGATAGCGAAGAATCTTTTCGACATTGGGTTTAAACGGCGACTGGCTGCTATAGAAGGAAGCTGGTTTGGTGCTTGGGGTCTGGAAAGAATGTTTTGGGATAATATTGTTTTCAAAAACATACGTCAAGTATTCGGAGGGCGCATTCGGTACAGCATCTGTAGTGGAGCTCCTTTATCAACTGATTCACAACGATTCATGAATATCTGCATGGGTGCTCCAGTCGGTCAAGCATATGGCTTGACAGAAACATTTGCCGCAGCTACGGTGTCCGAGAAGGATGACACTACAGTGGGACGTGTTGGCCCGCCCCTGCAATCTTGCTGCATTAAGCTTGTTTCTTGGAAAGATGGTGGATACTTGACATCTGACAAGCCAATGCCTCGCGGCGAGATTGTAGTTGGCGGACCCTCTGTAACTACAGGCTACTTTAAAAATCAAGAGAAGACTGATGAGGTTTACAAGGTGATGGAGTTTTCTAACAAGCCTGTAAATGTCATTTTGGTTTTCTGTGATATGTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001676 GO:0003674 GO:0003824 GO:0004467 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0006082 GO:0006629 GO:0006631 GO:0008150 GO:0008152 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0012505 GO:0015645 GO:0016405 GO:0016874 GO:0016877 GO:0016878 GO:0019752 GO:0031967 GO:0031975 GO:0032787 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0071704

KEGG Pathways

Metabolic & Signaling

ko00061 ko00071 ko01100 ko01212 ko02024 ko03320 ko04146 ko04216 ko04714 ko04920 map00061 map00071 map01100 map01212 map02024 map03320 map04146 map04216 map04714 map04920

Pfam Domains

Protein Families

AMP-binding

Protein Analysis

577

Amino Acids

63.17

Weight (kDa)

8.14

Isoelectric Point (pI)

32.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	130 - 547	2.9e-79	AMP-binding enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002434)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G04350 AT2G04350
fragaria_vesca	FvH4_6g40470 FvH4_6g40470 FvH4_6g40470 FvH4_6g40470 FvH4_6g40470 FvH4_6g40470 FvH4_6g40470 FvH4_6g40470
malus_domestica	MD09G1129700.v1.1 MD17G1118500.v1.1
prunus_persica	Prupe.3G195600_v2.0.a1 Prupe.3G195600_v2.0.a1 Prupe.3G195600_v2.0.a1 Prupe.3G195600_v2.0.a1
pyrus_communis	pycom09g05270 pycom17g10890
rosa_chinensis	RchiOBHm_Chr2g0155701 RchiOBHm_Chr2g0155721
rosa_laevigata	RLG00000020855 RLG00000020857 RLG00000020858
rosa_multiflora	Rmu_co8272995.1_g000001 Rmu_co8427559.1_g000001 Rmu_sc0002712.1_g000001 Rmu_sc0011953.1_g000003 Rmu_sc0011953.1_g000015
rosa_roxburghii	Rroxscaffold_2G00093540
rosa_rugosa	Rorug02G0449500
rosa_samantha	Rh2AG515400 Rh2AG515500 Rh2BG526400 Rh2BG526500 Rh2CG500300 Rh2CG500500 Rh2DG535300 Rh2DG535500
rosa_wichuraiana	Rw2G042360 Rw2G042370 Rw2G042390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	899
Acc36I	ACCTGC	1 cut(s)	1028
AccI	GTMKAC	3 cut(s)	860, 880, 972
AccII	CGCG	1 cut(s)	1596
AciI	CCGC	7 cut(s)	142, 515, 547, 1467, 1517, 1596, 1614
AcsI	RAATTY	1 cut(s)	726
AcuI	CTGAAG	2 cut(s)	642, 804
AcyI	GRCGYC	1 cut(s)	258
AfaI	GTAC	2 cut(s)	874, 1361
AfeI	AGCGCT	1 cut(s)	97
AfiI	CCNNNNNNNGG	2 cut(s)	141, 589
AflIII	ACRYGT	1 cut(s)	1507
AgsI	TTSAA	4 cut(s)	716, 1007, 1086, 1324
AjiI	CACGTC	1 cut(s)	1508
AjuI	GAANNNNNNNTTGG	4 cut(s)	374, 406, 814, 846
AleI	CACNNNNGTG	1 cut(s)	1499
Alw21I	GWGCWC	2 cut(s)	1381, 1429
Alw26I	GTCTC	3 cut(s)	249, 249, 611
AlwNI	CAGNNNCTG	2 cut(s)	1154, 1368
Ama87I	CYCGRG	1 cut(s)	510
Aor51HI	AGCGCT	1 cut(s)	97
AoxI	GGCC	1 cut(s)	1513
ApoI	RAATTY	1 cut(s)	726
Asp700I	GAANNNNTTC	1 cut(s)	1226
AspA2I	CCTAGG	1 cut(s)	583
AspLEI	GCGC	2 cut(s)	98, 1353
AspS9I	GGNCC	2 cut(s)	1514, 1616
AsuC2I	CCSGG	2 cut(s)	511, 512
AsuHPI	GGTGA	3 cut(s)	515, 599, 1687
AvaI	CYCGRG	1 cut(s)	510
AvaII	GGWCC	1 cut(s)	1616
AvrII	CCTAGG	1 cut(s)	583
BaeI	ACNNNNGTAYC	2 cut(s)	609, 642
BanII	GRGCYC	2 cut(s)	21, 1381
BbsI	GAAGAC	1 cut(s)	1661
Bbv12I	GWGCWC	2 cut(s)	1381, 1429
BccI	CCATC	4 cut(s)	359, 1024, 1553, 1672
BceAI	ACGGC	1 cut(s)	1262
BciVI	GTATCC	2 cut(s)	475, 1559
BcnI	CCSGG	2 cut(s)	511, 512
BcoDI	GTCTC	3 cut(s)	249, 249, 611
BfaI	CTAG	5 cut(s)	57, 327, 360, 467, 584
BfmI	CTRYAG	6 cut(s)	927, 1035, 1260, 1369, 1497, 1629
BfoI	RGCGCY	1 cut(s)	99
BfuAI	ACCTGC	1 cut(s)	1028
BfuI	GTATCC	2 cut(s)	475, 1559
BglII	AGATCT	1 cut(s)	61
BlnI	CCTAGG	1 cut(s)	583
Bme1390I	CCNGG	2 cut(s)	511, 512
Bme18I	GGWCC	1 cut(s)	1616
BmeT110I	CYCGRG	1 cut(s)	510
BmgBI	CACGTC	1 cut(s)	1508
BmgT120I	GGNCC	2 cut(s)	1514, 1616
BmiI	GGNNCC	2 cut(s)	1105, 1618
BmrFI	CCNGG	2 cut(s)	511, 512
BmsI	GCATC	7 cut(s)	236, 458, 530, 583, 724, 1168, 1374
BpiI	GAAGAC	1 cut(s)	1661
BpmI	CTGGAG	1 cut(s)	1413
Bpu10I	CCTNAGC	1 cut(s)	991
BpuEI	CTTGAG	2 cut(s)	207, 664
BpuMI	CCSGG	2 cut(s)	511, 512
Bsa29I	ATCGAT	1 cut(s)	313
BsaHI	GRCGYC	1 cut(s)	258
BsaJI	CCNNGG	3 cut(s)	510, 583, 1107
BsaXI	ACNNNNNCTCC	2 cut(s)	165, 195
Bsc4I	CCNNNNNNNGG	2 cut(s)	141, 589
Bse1I	ACTGG	4 cut(s)	135, 1014, 1257, 1430
Bse3DI	GCAATG	4 cut(s)	223, 843, 916, 975
BseCI	ATCGAT	1 cut(s)	313
BseDI	CCNNGG	3 cut(s)	510, 583, 1107
BseGI	GGATG	5 cut(s)	545, 598, 773, 817, 1495
BseLI	CCNNNNNNNGG	2 cut(s)	141, 589
BseMI	GCAATG	4 cut(s)	223, 843, 916, 975
BseMII	CTCAG	2 cut(s)	222, 1008
BseNI	ACTGG	4 cut(s)	135, 1014, 1257, 1430
BseRI	GAGGAG	3 cut(s)	186, 237, 1214
Bsh1236I	CGCG	1 cut(s)	1596
BshFI	GGCC	1 cut(s)	1515
BshVI	ATCGAT	1 cut(s)	313
BsiHKAI	GWGCWC	2 cut(s)	1381, 1429
BsiHKCI	CYCGRG	1 cut(s)	510
BsiSI	CCGG	1 cut(s)	511
BslFI	GGGAC	1 cut(s)	1518
BslI	CCNNNNNNNGG	2 cut(s)	141, 589
BsmAI	GTCTC	3 cut(s)	249, 249, 611
BsmBI	CGTCTC	1 cut(s)	249
BsmFI	GGGAC	1 cut(s)	1518
BsmI	GAATGC	2 cut(s)	301, 1353
BsnI	GGCC	1 cut(s)	1515
BsoBI	CYCGRG	1 cut(s)	510
Bsp1286I	GDGCHC	3 cut(s)	21, 1381, 1429
Bsp143I	GATC	3 cut(s)	61, 636, 1165
BspACI	CCGC	7 cut(s)	142, 515, 547, 1467, 1517, 1596, 1614
BspANI	GGCC	1 cut(s)	1515
BspCNI	CTCAG	2 cut(s)	223, 1009
BspDI	ATCGAT	1 cut(s)	313
BspFNI	CGCG	1 cut(s)	1596
BspHI	TCATGA	2 cut(s)	472, 1407
BspLI	GGNNCC	2 cut(s)	1105, 1618
BspMAI	CTGCAG	2 cut(s)	931, 1039
BspMI	ACCTGC	1 cut(s)	1028
BsrDI	GCAATG	4 cut(s)	223, 843, 916, 975
BsrI	ACTGG	4 cut(s)	135, 1014, 1257, 1430
BssECI	CCNNGG	3 cut(s)	510, 583, 1107
BssMI	GATC	3 cut(s)	61, 636, 1165
BssNAI	GTATAC	2 cut(s)	861, 973
BssNI	GRCGYC	1 cut(s)	258
BssT1I	CCWWGG	2 cut(s)	583, 1107
Bst1107I	GTATAC	2 cut(s)	861, 973
Bst4CI	ACNGT	7 cut(s)	268, 562, 769, 957, 1150, 1477, 1501
BstACI	GRCGYC	1 cut(s)	258
BstC8I	GCNNGC	3 cut(s)	164, 439, 1517
BstDEI	CTNAG	4 cut(s)	231, 834, 991, 1017
BstENI	CCTNNNNNAGG	1 cut(s)	587
BstF5I	GGATG	5 cut(s)	545, 598, 773, 817, 1495
BstFNI	CGCG	1 cut(s)	1596
BstH2I	RGCGCY	1 cut(s)	99
BstHHI	GCGC	2 cut(s)	98, 1353
BstKTI	GATC	3 cut(s)	64, 639, 1168
BstMAI	GTCTC	3 cut(s)	249, 249, 611
BstMBI	GATC	3 cut(s)	61, 636, 1165
BstMWI	GCNNNNNNNGC	1 cut(s)	926
BstSCI	CCNGG	2 cut(s)	509, 510
BstSFI	CTRYAG	6 cut(s)	927, 1035, 1260, 1369, 1497, 1629
BstUI	CGCG	1 cut(s)	1596
BstV2I	GAAGAC	1 cut(s)	1661
BstX2I	RGATCY	1 cut(s)	61
BstYI	RGATCY	1 cut(s)	61
BstZ17I	GTATAC	2 cut(s)	861, 973
Bsu15I	ATCGAT	1 cut(s)	313
BsuI	GTATCC	2 cut(s)	475, 1559
BsuRI	GGCC	1 cut(s)	1515
BsuTUI	ATCGAT	1 cut(s)	313
BtrI	CACGTC	1 cut(s)	1508
BtsCI	GGATG	5 cut(s)	545, 598, 773, 817, 1495
BtsIMutI	CAGTG	2 cut(s)	963, 1506
BveI	ACCTGC	1 cut(s)	1028
Cac8I	GCNNGC	3 cut(s)	164, 439, 1517
CaiI	CAGNNNCTG	2 cut(s)	1154, 1368
CciI	TCATGA	2 cut(s)	472, 1407
CfoI	GCGC	2 cut(s)	98, 1353
Cfr13I	GGNCC	2 cut(s)	1514, 1616
Cfr9I	CCCGGG	1 cut(s)	510
ClaI	ATCGAT	1 cut(s)	313
CseI	GACGC	1 cut(s)	266
Csp6I	GTAC	2 cut(s)	873, 1360
CviAII	CATG	7 cut(s)	473, 856, 905, 998, 1141, 1408, 1420
CviQI	GTAC	2 cut(s)	873, 1360
DdeI	CTNAG	4 cut(s)	231, 834, 991, 1017
DpnI	GATC	3 cut(s)	63, 638, 1167
DpnII	GATC	3 cut(s)	61, 636, 1165
DraI	TTTAAA	2 cut(s)	1243, 1642
EciI	GGCGGA	3 cut(s)	530, 536, 1629
Ecl136II	GAGCTC	1 cut(s)	1379
Eco130I	CCWWGG	2 cut(s)	583, 1107
Eco24I	GRGCYC	2 cut(s)	21, 1381
Eco47I	GGWCC	1 cut(s)	1616
Eco47III	AGCGCT	1 cut(s)	97
Eco53kI	GAGCTC	1 cut(s)	1379
Eco57I	CTGAAG	2 cut(s)	642, 804
Eco88I	CYCGRG	1 cut(s)	510
EcoICRI	GAGCTC	1 cut(s)	1379
EcoNI	CCTNNNNNAGG	1 cut(s)	587
EcoT14I	CCWWGG	2 cut(s)	583, 1107
EcoT38I	GRGCYC	2 cut(s)	21, 1381
ErhI	CCWWGG	2 cut(s)	583, 1107
Esp3I	CGTCTC	1 cut(s)	249
FaeI	CATG	7 cut(s)	476, 859, 908, 1001, 1144, 1411, 1423
FalI	AAGNNNNNCTT	2 cut(s)	814, 846
FaqI	GGGAC	1 cut(s)	1518
FatI	CATG	7 cut(s)	472, 855, 904, 997, 1140, 1407, 1419
FauI	CCCGC	1 cut(s)	1524
FauNDI	CATATG	1 cut(s)	1444
FblI	GTMKAC	3 cut(s)	860, 880, 972
FokI	GGATG	5 cut(s)	552, 605, 760, 804, 1502
FriOI	GRGCYC	2 cut(s)	21, 1381
FspBI	CTAG	5 cut(s)	57, 327, 360, 467, 584
GlaI	GCGC	2 cut(s)	97, 1352
GsuI	CTGGAG	1 cut(s)	1413
HaeII	RGCGCY	1 cut(s)	99
HaeIII	GGCC	1 cut(s)	1515
HapII	CCGG	1 cut(s)	511
HgaI	GACGC	1 cut(s)	266
HhaI	GCGC	2 cut(s)	98, 1353
Hin1I	GRCGYC	1 cut(s)	258
Hin1II	CATG	7 cut(s)	476, 859, 908, 1001, 1144, 1411, 1423
Hin6I	GCGC	2 cut(s)	96, 1351
HinP1I	GCGC	2 cut(s)	96, 1351
HindIII	AAGCTT	2 cut(s)	794, 1541
HpaII	CCGG	1 cut(s)	511
HphI	GGTGA	3 cut(s)	515, 599, 1687
Hpy166II	GTNNAC	5 cut(s)	28, 861, 881, 973, 1669
Hpy188I	TCNGA	7 cut(s)	78, 232, 733, 784, 1346, 1483, 1579
Hpy188III	TCNNGA	5 cut(s)	473, 1175, 1292, 1408, 1649
Hpy8I	GTNNAC	5 cut(s)	28, 861, 881, 973, 1669
Hpy99I	CGWCG	1 cut(s)	272
HpyAV	CCTTC	7 cut(s)	194, 336, 716, 840, 1094, 1259, 1480
HpyCH4III	ACNGT	7 cut(s)	268, 562, 769, 957, 1150, 1477, 1501
HpyCH4IV	ACGT	2 cut(s)	1333, 1507
HpyF10VI	GCNNNNNNNGC	1 cut(s)	926
HpyF3I	CTNAG	4 cut(s)	231, 834, 991, 1017
HpySE526I	ACGT	2 cut(s)	1333, 1507
Hsp92I	GRCGYC	1 cut(s)	258
Hsp92II	CATG	7 cut(s)	476, 859, 908, 1001, 1144, 1411, 1423
HspAI	GCGC	2 cut(s)	96, 1351
Kzo9I	GATC	3 cut(s)	61, 636, 1165
LmnI	GCTCC	4 cut(s)	346, 1376, 1384, 1432
LweI	GCATC	7 cut(s)	236, 458, 530, 583, 724, 1168, 1374
MaeI	CTAG	5 cut(s)	57, 327, 360, 467, 584
MaeII	ACGT	2 cut(s)	1333, 1507
MaeIII	GTNAC	7 cut(s)	203, 293, 503, 565, 752, 769, 1624
MalI	GATC	3 cut(s)	63, 638, 1167
MboI	GATC	3 cut(s)	61, 636, 1165
MboII	GAAGA	4 cut(s)	570, 728, 1231, 1666
MflI	RGATCY	1 cut(s)	61
MhlI	GDGCHC	3 cut(s)	21, 1381, 1429
MluCI	AATT	7 cut(s)	72, 374, 495, 726, 760, 1047, 1092
MlyI	GAGTC	4 cut(s)	251, 900, 1028, 1129
MroXI	GAANNNNTTC	1 cut(s)	1226
MseI	TTAA	9 cut(s)	236, 612, 696, 1073, 1095, 1127, 1242, 1539, 1641
MslI	CAYNNNNRTG	2 cut(s)	909, 1499
MspA1I	CMGCKG	1 cut(s)	655
MspI	CCGG	1 cut(s)	511
MspR9I	CCNGG	2 cut(s)	511, 512
MssI	GTTTAAAC	1 cut(s)	1243
Mva1269I	GAATGC	2 cut(s)	301, 1353
MvnI	CGCG	1 cut(s)	1596
MwoI	GCNNNNNNNGC	1 cut(s)	926
NciI	CCSGG	2 cut(s)	511, 512
NdeI	CATATG	1 cut(s)	1444
NdeII	GATC	3 cut(s)	61, 636, 1165
NlaIII	CATG	7 cut(s)	476, 859, 908, 1001, 1144, 1411, 1423
NlaIV	GGNNCC	2 cut(s)	1105, 1618
NmuCI	GTSAC	1 cut(s)	503
OliI	CACNNNNGTG	1 cut(s)	1499
PagI	TCATGA	2 cut(s)	472, 1407
PcsI	WCGNNNNNNNCGW	1 cut(s)	264
PctI	GAATGC	2 cut(s)	301, 1353
PdmI	GAANNNNTTC	1 cut(s)	1226
PfeI	GAWTC	6 cut(s)	310, 601, 644, 1222, 1394, 1404
PleI	GAGTC	4 cut(s)	250, 899, 1027, 1129
PmeI	GTTTAAAC	1 cut(s)	1243
PpsI	GAGTC	4 cut(s)	250, 899, 1027, 1129
PsiI	TTATAA	1 cut(s)	899
Psp124BI	GAGCTC	1 cut(s)	1381
PspN4I	GGNNCC	2 cut(s)	1105, 1618
PspPI	GGNCC	2 cut(s)	1514, 1616
PstI	CTGCAG	2 cut(s)	931, 1039
PstNI	CAGNNNCTG	2 cut(s)	1154, 1368
PsuI	RGATCY	1 cut(s)	61
PvuII	CAGCTG	1 cut(s)	655
RsaI	GTAC	2 cut(s)	874, 1361
RsaNI	GTAC	2 cut(s)	873, 1360
RseI	CAYNNNNRTG	2 cut(s)	909, 1499
SacI	GAGCTC	1 cut(s)	1381
SaqAI	TTAA	9 cut(s)	236, 612, 696, 1073, 1095, 1127, 1242, 1539, 1641
Sau3AI	GATC	3 cut(s)	61, 636, 1165
Sau96I	GGNCC	2 cut(s)	1514, 1616
SchI	GAGTC	4 cut(s)	251, 900, 1028, 1129
ScrFI	CCNGG	2 cut(s)	511, 512
SduI	GDGCHC	3 cut(s)	21, 1381, 1429
SfaNI	GCATC	7 cut(s)	236, 458, 530, 583, 724, 1168, 1374
SfcI	CTRYAG	6 cut(s)	927, 1035, 1260, 1369, 1497, 1629
SinI	GGWCC	1 cut(s)	1616
SmaI	CCCGGG	1 cut(s)	512
SmiMI	CAYNNNNRTG	2 cut(s)	909, 1499
SmlI	CTYRAG	2 cut(s)	222, 679
SmoI	CTYRAG	2 cut(s)	222, 679
Sse9I	AATT	7 cut(s)	72, 374, 495, 726, 760, 1047, 1092
SsiI	CCGC	7 cut(s)	142, 515, 547, 1467, 1517, 1596, 1614
SspI	AATATT	2 cut(s)	556, 1315
SspMI	CTAG	5 cut(s)	57, 327, 360, 467, 584
SstI	GAGCTC	1 cut(s)	1381
StyD4I	CCNGG	2 cut(s)	509, 510
StyI	CCWWGG	2 cut(s)	583, 1107
TaaI	ACNGT	7 cut(s)	268, 562, 769, 957, 1150, 1477, 1501
TaiI	ACGT	2 cut(s)	1336, 1510
TaqI	TCGA	5 cut(s)	240, 313, 748, 1174, 1230
TaqII	GACCGA	1 cut(s)	1424
TasI	AATT	7 cut(s)	72, 374, 495, 726, 760, 1047, 1092
TatI	WGTACW	1 cut(s)	872
TauI	GCSGC	2 cut(s)	1469, 1599
TfiI	GAWTC	6 cut(s)	310, 601, 644, 1222, 1394, 1404
Tru1I	TTAA	9 cut(s)	236, 612, 696, 1073, 1095, 1127, 1242, 1539, 1641
Tru9I	TTAA	9 cut(s)	236, 612, 696, 1073, 1095, 1127, 1242, 1539, 1641
TscAI	CASTG	2 cut(s)	970, 1506
TseFI	GTSAC	1 cut(s)	503
Tsp45I	GTSAC	1 cut(s)	503
TspDTI	ATGAA	5 cut(s)	417, 735, 1175, 1396, 1424
TspGWI	ACGGA	1 cut(s)	1091
TspMI	CCCGGG	1 cut(s)	510
TspRI	CASTG	2 cut(s)	970, 1506
VpaK11BI	GGWCC	1 cut(s)	1616
XagI	CCTNNNNNAGG	1 cut(s)	587
XapI	RAATTY	1 cut(s)	726
XmaI	CCCGGG	1 cut(s)	510
XmaJI	CCTAGG	1 cut(s)	583
XmiI	GTMKAC	3 cut(s)	860, 880, 972
XmnI	GAANNNNTTC	1 cut(s)	1226
XspI	CTAG	5 cut(s)	57, 327, 360, 467, 584

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.