Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0002434

Physical Location & Seq

Genomic Coordinates Forward (+)

68664115 .. 68667662

Gene Structure 3548 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G042360.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2190 bp

ATGGAGGATTCTGAAGGGAGCGTCTTGAACTCACCGGTTGAAGAAAACTTGGGTGCTAGTGATCACTTGTCAATTCTGAAAGGCTATGGAGCATTTGGGATATTGGGTGCTGTTATTATTGCCCTACTTGTACCTTTGTTGCTGTCAACTGTGTTCCTGGGAAAGAAAAGGAAGCAACGAGGAGTTCCCGTGCAAGTTGGTGGTGAGGAAGGTTATGCAATGCGCAACATTCGTGTTACTGACTTGATTGAAACTCCTCATAAAGAGGCGACAACTGTGCCAGCCTTGTTTGAGCAATCTTGTGAAAAGTACGCACAGAATCAGTTTCTTGGAACCAGGAAGTTGATTGGAAGGGAAGTTGTCACAGCTAGCAATGGCAAGAAGTTTGAGAAACTTCACTTAGGAGATTATGAATGGCAAACTTACAGACAAGTCTTTGATCGTGCTTGCAACTTTGCATCTGGCCTTATTAAGTTAGGTCATAATGTGGATACCCGTGCTGCAATTTTTGCTGACACCTGCGCAGAGTGGTTTATAACCTTTCAGGGGTGCTTCCGGCAGAATATTACTGTTGTTACGATCTATTCTTCCCTAGGTGAGGATGCCCTAATCCACTCGCTTAATGAGACTCAAGTTTCAACATTGATCTGTGATTCAAAGCAGTTGAAAAAGCTGGCTTCCATAAGCTCAAGGCTAAATAGCATAAAAAATGTAATTTATTTTGAAGACGAGGGAAGTTCAGATGCTAAAGAATTTGAAAGTACTACCAATTGGACGGTCAGATCCATTTCTGAAGTTGAGAAACTTGGACAAGAAAATTCTGTTCATCCACGTTTACCTTCTAAGAATGACATCGCTGTTATCATGTATACGAGCGGCAGTACAGGTCTACCAAAGGGGGTCATGATAACTCATGGCAATATTGTAGCCACTACGGCAGCTGTTACGACACTGATTCCAAGTCTGGGTGGCACTGATGCATACTTAGCATACTTGCCCTTAGCTCATGTTTTTGAATTGGCCGCGGAGTCTGTGATGATGGCTTCAGGTGTTAAAGTTGGTTATGGTTCAGCATTGACTTTAACAGACACTTCAAATAAAATTAAGAAAGGAACCAAGGGAGATGTTTCTATGTTAAAGCCGACTCTCATGACTACAGTTCCTGCTATTATAGATCGTATTCGTGATGCAGTTTTTAAAAAGGTTGAGGAGAAAGGGGGGACAGCGAAGAACCTTTTTGACATTGGATTTAAACGGCGACTGGCTGCTGTTGAAGGAAGCTGGTTTGGTGCTTGGGGTCTGGAAAAATTGTTTTGGGATAATTTTGTCTTTAAAGTTATACGTCTAGGGCTGGGAGGGCGCATTCGCTTTATGATCTGTGGTGGAGCTCCTTTATCTGCTGATTCACAACGATTCATCAATATCTGCATGGGTGCTCCAATCGGGCAAGCATATGGCTTGACAGAAACATTTGCTGGAGCTACGTTTTCTGAGTGGGATGACACAGCAGTGGGCCGTGTTGGCCCACCATTGCCTAGTTGCTACATTAAGCTTGTTTCTTGGAAAGAAGGTGGATACTTGGCATCTGACAAGCCAATGCCTCGTGGGGAGATTGTTATTGGGGGACCCTGTGTAACTGCTGGGTACTTTAAGAATCAAGAAAAGACTGACGAGGTCTACAAGGTTGATGAGAATGGCATGCGCTGGTTTTATACTGGTGACATTGGAATGTTTCATCCTGATGGATGCCTTGAAATTATAGATAGGAAGAAGGATATCGTTAAACTCCAGCATGGAGAATACATCTCCCTCGGAAAGGTTGAGGCAGCATTGATAAACAGTAATTATGTGGACAATATCATGGTATTTGCAGACCCCTTCCACAACTACTGCGTAGCTGTAGTTGCCCCTGTGCGTCAAGCCCTGGAGCAGTGGGCTCAGGGAGCTGGAATCAAGTACAATGATTTTTCTGAGCTGTGTGGAAAAGCTGAAGCAGTTAGTGAGGTCCAGCAATCCCTCTCCAAGGTAGCAAAAGAAGCAAAATTGGACAAGTTTGAACTTCCTGGAAAGATTTATTTGGCGCCTGATCCATGGACACCTGAATCCGGATTGGTTACTGCTGCTCTCAAGATCAAGAGGGAACAGATCAAGTCCAAGTTCAAAAGTGAGATTGAGAAGTTGTATGGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001676 GO:0003674 GO:0003824 GO:0004467 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0006082 GO:0006629 GO:0006631 GO:0008150 GO:0008152 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0012505 GO:0015645 GO:0016405 GO:0016874 GO:0016877 GO:0016878 GO:0019752 GO:0031967 GO:0031975 GO:0032787 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0071704

KEGG Pathways

Metabolic & Signaling

ko00061 ko00071 ko01100 ko01212 ko02024 ko03320 ko04146 ko04216 ko04714 ko04920 map00061 map00071 map01100 map01212 map02024 map03320 map04146 map04216 map04714 map04920

Pfam Domains

Protein Families

AMP-binding

Protein Analysis

729

Amino Acids

79.93

Weight (kDa)

6.85

Isoelectric Point (pI)

26.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	130 - 550	4.3e-86	AMP-binding enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002434)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G04350 AT2G04350
fragaria_vesca	FvH4_6g40470 FvH4_6g40470 FvH4_6g40470 FvH4_6g40470 FvH4_6g40470 FvH4_6g40470 FvH4_6g40470 FvH4_6g40470
malus_domestica	MD09G1129700.v1.1 MD17G1118500.v1.1
prunus_persica	Prupe.3G195600_v2.0.a1 Prupe.3G195600_v2.0.a1 Prupe.3G195600_v2.0.a1 Prupe.3G195600_v2.0.a1
pyrus_communis	pycom09g05270 pycom17g10890
rosa_chinensis	RchiOBHm_Chr2g0155701 RchiOBHm_Chr2g0155721
rosa_laevigata	RLG00000020855 RLG00000020857 RLG00000020858
rosa_multiflora	Rmu_co8272995.1_g000001 Rmu_co8427559.1_g000001 Rmu_sc0002712.1_g000001 Rmu_sc0011953.1_g000003 Rmu_sc0011953.1_g000015
rosa_roxburghii	Rroxscaffold_2G00093540
rosa_rugosa	Rorug02G0449500
rosa_samantha	Rh2AG515400 Rh2AG515500 Rh2BG526400 Rh2BG526500 Rh2CG500300 Rh2CG500500 Rh2DG535300 Rh2DG535500
rosa_wichuraiana	Rw2G042360 Rw2G042370 Rw2G042390

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	536
AarI	CACCTGC	1 cut(s)	527
Acc16I	TGCGCA	2 cut(s)	224, 523
Acc36I	ACCTGC	1 cut(s)	527
AccB1I	GGYRCC	1 cut(s)	2080
AccBSI	CCGCTC	1 cut(s)	876
AccI	GTMKAC	3 cut(s)	869, 889, 1677
AccII	CGCG	1 cut(s)	1025
AccIII	TCCGGA	1 cut(s)	2105
AciI	CCGC	3 cut(s)	876, 1023, 1025
AclWI	GGATC	2 cut(s)	777, 2081
AcoI	YGGCCR	1 cut(s)	1020
AcsI	RAATTY	2 cut(s)	752, 817
AcuI	CTGAAG	4 cut(s)	33, 813, 1029, 2010
AcyI	GRCGYC	1 cut(s)	2081
AfaI	GTAC	6 cut(s)	132, 311, 763, 883, 1646, 1958
AfiI	CCNNNNNNNGG	6 cut(s)	546, 598, 965, 1816, 2023, 2105
AgeI	ACCGGT	1 cut(s)	34
AjnI	CCWGG	4 cut(s)	156, 335, 1923, 2062
AleI	CACNNNNGTG	1 cut(s)	1508
Alw21I	GWGCWC	2 cut(s)	1390, 1438
Alw26I	GTCTC	1 cut(s)	620
AlwI	GGATC	2 cut(s)	777, 2081
AlwNI	CAGNNNCTG	1 cut(s)	1163
Aor13HI	TCCGGA	1 cut(s)	2105
AoxI	GGCC	4 cut(s)	463, 1020, 1513, 1522
ApeKI	GCWGC	5 cut(s)	500, 938, 1265, 1826, 2120
ApoI	RAATTY	2 cut(s)	752, 817
AsiGI	ACCGGT	1 cut(s)	34
AspA2I	CCTAGG	1 cut(s)	592
AspLEI	GCGC	5 cut(s)	225, 524, 1362, 1704, 2083
AspS9I	GGNCC	4 cut(s)	1513, 1523, 1625, 2005
AsuHPI	GGTGA	4 cut(s)	24, 215, 608, 1730
AsuNHI	GCTAGC	1 cut(s)	368
AvaII	GGWCC	2 cut(s)	1625, 2005
AvrII	CCTAGG	1 cut(s)	592
BanI	GGYRCC	1 cut(s)	2080
BanII	GRGCYC	2 cut(s)	1390, 1939
BauI	CACGAG	1 cut(s)	1602
BbsI	GAAGAC	1 cut(s)	732
Bbv12I	GWGCWC	2 cut(s)	1390, 1438
BbvI	GCAGC	5 cut(s)	487, 950, 1252, 1838, 2107
BccI	CCATC	2 cut(s)	1033, 1736
BceAI	ACGGC	3 cut(s)	951, 1271, 1500
BcgI	CGANNNNNNTGC	2 cut(s)	259, 293
BciT130I	CCWGG	4 cut(s)	158, 337, 1925, 2064
BciVI	GTATCC	2 cut(s)	484, 1568
BclI	TGATCA	1 cut(s)	61
BcoDI	GTCTC	1 cut(s)	620
BfaI	CTAG	5 cut(s)	57, 369, 593, 1346, 1536
BfmI	CTRYAG	2 cut(s)	1155, 1899
BfoI	RGCGCY	1 cut(s)	2084
BfuAI	ACCTGC	1 cut(s)	527
BfuI	GTATCC	2 cut(s)	484, 1568
BglI	GCCNNNNNGGC	2 cut(s)	935, 1521
BisI	GCNGC	7 cut(s)	501, 877, 939, 1023, 1266, 1827, 2121
BlnI	CCTAGG	1 cut(s)	592
BlsI	GCNGC	7 cut(s)	502, 878, 940, 1024, 1267, 1828, 2122
BmcAI	AGTACT	1 cut(s)	763
Bme1390I	CCNGG	4 cut(s)	158, 337, 1925, 2064
Bme18I	GGWCC	2 cut(s)	1625, 2005
BmgT120I	GGNCC	4 cut(s)	1513, 1523, 1625, 2005
BmiI	GGNNCC	5 cut(s)	334, 1114, 1626, 1627, 2082
BmrFI	CCNGG	4 cut(s)	158, 337, 1925, 2064
BmsI	GCATC	7 cut(s)	467, 592, 733, 967, 1177, 1592, 1736
BmtI	GCTAGC	1 cut(s)	372
BpiI	GAAGAC	1 cut(s)	732
BpmI	CTGGAG	3 cut(s)	1497, 1772, 1946
Bpu10I	CCTNAGC	2 cut(s)	1000, 1938
BpuEI	CTTGAG	3 cut(s)	615, 673, 2111
BsaHI	GRCGYC	1 cut(s)	2081
BsaJI	CCNNGG	8 cut(s)	157, 592, 1023, 1116, 1810, 1923, 2022, 2090
BsaWI	WCCGGW	2 cut(s)	34, 2105
BsaXI	ACNNNNNCTCC	2 cut(s)	174, 204
Bsc4I	CCNNNNNNNGG	6 cut(s)	546, 598, 965, 1816, 2023, 2105
Bse118I	RCCGGY	1 cut(s)	34
Bse1I	ACTGG	2 cut(s)	1266, 1720
Bse3DI	GCAATG	3 cut(s)	225, 379, 1529
BseAI	TCCGGA	1 cut(s)	2105
BseBI	CCWGG	4 cut(s)	158, 337, 1925, 2064
BseDI	CCNNGG	8 cut(s)	157, 592, 1023, 1116, 1810, 1923, 2022, 2090
BseGI	GGATG	5 cut(s)	607, 826, 1504, 1735, 1751
BseLI	CCNNNNNNNGG	6 cut(s)	546, 598, 965, 1816, 2023, 2105
BseMI	GCAATG	3 cut(s)	225, 379, 1529
BseMII	CTCAG	3 cut(s)	1482, 1952, 1962
BseNI	ACTGG	2 cut(s)	1266, 1720
BseRI	GAGGAG	3 cut(s)	195, 246, 1223
BseXI	GCAGC	5 cut(s)	487, 950, 1252, 1838, 2107
BseYI	CCCAGC	2 cut(s)	1351, 1640
Bsh1236I	CGCG	1 cut(s)	1025
BshFI	GGCC	4 cut(s)	465, 1022, 1515, 1524
BshNI	GGYRCC	1 cut(s)	2080
BshTI	ACCGGT	1 cut(s)	34
BsiHKAI	GWGCWC	2 cut(s)	1390, 1438
BsiSI	CCGG	3 cut(s)	35, 556, 2106
BslFI	GGGAC	2 cut(s)	1234, 1638
BslI	CCNNNNNNNGG	6 cut(s)	546, 598, 965, 1816, 2023, 2105
BsmAI	GTCTC	1 cut(s)	620
BsmFI	GGGAC	2 cut(s)	1234, 1638
BsmI	GAATGC	1 cut(s)	1362
BsnI	GGCC	4 cut(s)	465, 1022, 1515, 1524
Bsp1286I	GDGCHC	3 cut(s)	1390, 1438, 1939
Bsp13I	TCCGGA	1 cut(s)	2105
Bsp19I	CCATGG	1 cut(s)	2090
BspACI	CCGC	3 cut(s)	876, 1023, 1025
BspANI	GGCC	4 cut(s)	465, 1022, 1515, 1524
BspCNI	CTCAG	3 cut(s)	1483, 1951, 1963
BspEI	TCCGGA	1 cut(s)	2105
BspFNI	CGCG	1 cut(s)	1025
BspHI	TCATGA	2 cut(s)	903, 1149
BspLI	GGNNCC	5 cut(s)	334, 1114, 1626, 1627, 2082
BspMI	ACCTGC	1 cut(s)	527
BspOI	GCTAGC	1 cut(s)	372
BspPI	GGATC	2 cut(s)	777, 2081
BspT107I	GGYRCC	1 cut(s)	2080
BsrBI	CCGCTC	1 cut(s)	876
BsrDI	GCAATG	3 cut(s)	225, 379, 1529
BsrFI	RCCGGY	1 cut(s)	34
BsrI	ACTGG	2 cut(s)	1266, 1720
BssAI	RCCGGY	1 cut(s)	34
BssECI	CCNNGG	8 cut(s)	157, 592, 1023, 1116, 1810, 1923, 2022, 2090
BssNAI	GTATAC	1 cut(s)	870
BssNI	GRCGYC	1 cut(s)	2081
BssSI	CACGAG	1 cut(s)	1602
BssT1I	CCWWGG	4 cut(s)	592, 1116, 2022, 2090
Bst1107I	GTATAC	1 cut(s)	870
Bst2BI	CACGAG	1 cut(s)	1602
Bst2UI	CCWGG	4 cut(s)	158, 337, 1925, 2064
Bst4CI	ACNGT	6 cut(s)	151, 277, 571, 778, 1159, 1841
BstACI	GRCGYC	1 cut(s)	2081
BstAPI	GCANNNNNTGC	1 cut(s)	509
BstC8I	GCNNGC	6 cut(s)	282, 370, 448, 675, 1449, 1700
BstDEI	CTNAG	7 cut(s)	400, 843, 985, 1000, 1491, 1938, 1971
BstDSI	CCRYGG	2 cut(s)	1023, 2090
BstENI	CCTNNNNNAGG	3 cut(s)	596, 1814, 2021
BstF5I	GGATG	5 cut(s)	607, 826, 1504, 1735, 1751
BstFNI	CGCG	1 cut(s)	1025
BstH2I	RGCGCY	1 cut(s)	2084
BstHHI	GCGC	5 cut(s)	225, 524, 1362, 1704, 2083
BstMAI	GTCTC	1 cut(s)	620
BstMWI	GCNNNNNNNGC	8 cut(s)	509, 935, 986, 1357, 1521, 1904, 1943, 2036
BstNI	CCWGG	4 cut(s)	158, 337, 1925, 2064
BstNSI	RCATGY	1 cut(s)	1702
BstSCI	CCNGG	4 cut(s)	156, 335, 1923, 2062
BstSFI	CTRYAG	2 cut(s)	1155, 1899
BstUI	CGCG	1 cut(s)	1025
BstV1I	GCAGC	5 cut(s)	487, 950, 1252, 1838, 2107
BstV2I	GAAGAC	1 cut(s)	732
BstX2I	RGATCY	1 cut(s)	782
BstYI	RGATCY	1 cut(s)	782
BstZ17I	GTATAC	1 cut(s)	870
BsuI	GTATCC	2 cut(s)	484, 1568
BsuRI	GGCC	4 cut(s)	465, 1022, 1515, 1524
BtgI	CCRYGG	2 cut(s)	1023, 2090
BtgZI	GCGATG	1 cut(s)	838
BtsCI	GGATG	5 cut(s)	607, 826, 1504, 1735, 1751
BtsI	GCAGTG	2 cut(s)	1515, 1937
BtsIMutI	CAGTG	4 cut(s)	950, 972, 1515, 1937
BveI	ACCTGC	1 cut(s)	527
Cac8I	GCNNGC	6 cut(s)	282, 370, 448, 675, 1449, 1700
CaiI	CAGNNNCTG	1 cut(s)	1163
CciI	TCATGA	2 cut(s)	903, 1149
CfoI	GCGC	5 cut(s)	225, 524, 1362, 1704, 2083
Cfr10I	RCCGGY	1 cut(s)	34
Cfr13I	GGNCC	4 cut(s)	1513, 1523, 1625, 2005
Cfr42I	CCGCGG	1 cut(s)	1026
CseI	GACGC	2 cut(s)	10, 1904
Csp6I	GTAC	6 cut(s)	131, 310, 762, 882, 1645, 1957
CspAI	ACCGGT	1 cut(s)	34
CviQI	GTAC	6 cut(s)	131, 310, 762, 882, 1645, 1957
DdeI	CTNAG	7 cut(s)	400, 843, 985, 1000, 1491, 1938, 1971
DinI	GGCGCC	1 cut(s)	2082
DraI	TTTAAA	3 cut(s)	1198, 1252, 1333
EaeI	YGGCCR	1 cut(s)	1020
Ecl136II	GAGCTC	1 cut(s)	1388
Eco130I	CCWWGG	4 cut(s)	592, 1116, 2022, 2090
Eco24I	GRGCYC	2 cut(s)	1390, 1939
Eco32I	GATATC	1 cut(s)	1777
Eco47I	GGWCC	2 cut(s)	1625, 2005
Eco53kI	GAGCTC	1 cut(s)	1388
Eco57I	CTGAAG	4 cut(s)	33, 813, 1029, 2010
EcoICRI	GAGCTC	1 cut(s)	1388
EcoNI	CCTNNNNNAGG	3 cut(s)	596, 1814, 2021
EcoO109I	RGGNCCY	1 cut(s)	1625
EcoRII	CCWGG	4 cut(s)	156, 335, 1923, 2062
EcoRV	GATATC	1 cut(s)	1777
EcoT14I	CCWWGG	4 cut(s)	592, 1116, 2022, 2090
EcoT22I	ATGCAT	1 cut(s)	982
EcoT38I	GRGCYC	2 cut(s)	1390, 1939
EgeI	GGCGCC	1 cut(s)	2082
EheI	GGCGCC	1 cut(s)	2082
ErhI	CCWWGG	4 cut(s)	592, 1116, 2022, 2090
FaqI	GGGAC	2 cut(s)	1234, 1638
FauNDI	CATATG	1 cut(s)	1453
FbaI	TGATCA	1 cut(s)	61
FblI	GTMKAC	3 cut(s)	869, 889, 1677
Fnu4HI	GCNGC	7 cut(s)	501, 877, 939, 1023, 1266, 1827, 2121
FokI	GGATG	5 cut(s)	614, 813, 1511, 1722, 1758
FriOI	GRGCYC	2 cut(s)	1390, 1939
Fsp4HI	GCNGC	7 cut(s)	501, 877, 939, 1023, 1266, 1827, 2121
FspBI	CTAG	5 cut(s)	57, 369, 593, 1346, 1536
FspI	TGCGCA	2 cut(s)	224, 523
GlaI	GCGC	5 cut(s)	224, 523, 1361, 1703, 2082
GluI	GCNGC	7 cut(s)	501, 877, 939, 1023, 1266, 1827, 2121
GsaI	CCCAGC	2 cut(s)	1355, 1644
GsuI	CTGGAG	3 cut(s)	1497, 1772, 1946
HaeII	RGCGCY	1 cut(s)	2084
HaeIII	GGCC	4 cut(s)	465, 1022, 1515, 1524
HapII	CCGG	3 cut(s)	35, 556, 2106
HgaI	GACGC	2 cut(s)	10, 1904
HhaI	GCGC	5 cut(s)	225, 524, 1362, 1704, 2083
Hin1I	GRCGYC	1 cut(s)	2081
Hin6I	GCGC	5 cut(s)	223, 522, 1360, 1702, 2081
HinP1I	GCGC	5 cut(s)	223, 522, 1360, 1702, 2081
HincII	GTYRAC	1 cut(s)	147
HindII	GTYRAC	1 cut(s)	147
HindIII	AAGCTT	1 cut(s)	1550
HpaII	CCGG	3 cut(s)	35, 556, 2106
HphI	GGTGA	4 cut(s)	24, 215, 608, 1730
Hpy166II	GTNNAC	6 cut(s)	147, 836, 870, 890, 1678, 1852
Hpy188I	TCNGA	9 cut(s)	13, 78, 742, 782, 793, 1492, 1588, 1814, 1972
Hpy8I	GTNNAC	6 cut(s)	147, 836, 870, 890, 1678, 1852
HpyAV	CCTTC	8 cut(s)	8, 203, 345, 849, 1268, 1562, 1765, 1888
HpyCH4III	ACNGT	6 cut(s)	151, 277, 571, 778, 1159, 1841
HpyCH4IV	ACGT	3 cut(s)	832, 1342, 1484
HpyCH4V	TGCA	9 cut(s)	193, 218, 450, 458, 503, 980, 1190, 1428, 1871
HpyF10VI	GCNNNNNNNGC	8 cut(s)	509, 935, 986, 1357, 1521, 1904, 1943, 2036
HpyF3I	CTNAG	7 cut(s)	400, 843, 985, 1000, 1491, 1938, 1971
HpySE526I	ACGT	3 cut(s)	832, 1342, 1484
Hsp92I	GRCGYC	1 cut(s)	2081
HspAI	GCGC	5 cut(s)	223, 522, 1360, 1702, 2081
KasI	GGCGCC	1 cut(s)	2080
KflI	GGGWCCC	1 cut(s)	1625
Kpn2I	TCCGGA	1 cut(s)	2105
Ksp22I	TGATCA	1 cut(s)	61
KspI	CCGCGG	1 cut(s)	1026
LmnI	GCTCC	8 cut(s)	18, 89, 1385, 1393, 1441, 1478, 1927, 1943
Lsp1109I	GCAGC	5 cut(s)	487, 950, 1252, 1838, 2107
LweI	GCATC	7 cut(s)	467, 592, 733, 967, 1177, 1592, 1736
MaeI	CTAG	5 cut(s)	57, 369, 593, 1346, 1536
MaeII	ACGT	3 cut(s)	832, 1342, 1484
MaeIII	GTNAC	7 cut(s)	235, 361, 574, 943, 1633, 1718, 2113
MbiI	CCGCTC	1 cut(s)	876
MboII	GAAGA	5 cut(s)	53, 579, 737, 1240, 1780
MfeI	CAATTG	1 cut(s)	769
MflI	RGATCY	1 cut(s)	782
MhlI	GDGCHC	3 cut(s)	1390, 1438, 1939
Mly113I	GGCGCC	1 cut(s)	2081
MlyI	GAGTC	3 cut(s)	622, 1037, 1138
Mph1103I	ATGCAT	1 cut(s)	982
MroI	TCCGGA	1 cut(s)	2105
MslI	CAYNNNNRTG	3 cut(s)	1508, 1727, 1740
MspA1I	CMGCKG	2 cut(s)	941, 1025
MspI	CCGG	3 cut(s)	35, 556, 2106
MspR9I	CCNGG	4 cut(s)	158, 337, 1925, 2064
MunI	CAATTG	1 cut(s)	769
Mva1269I	GAATGC	1 cut(s)	1362
MvaI	CCWGG	4 cut(s)	158, 337, 1925, 2064
MvnI	CGCG	1 cut(s)	1025
MwoI	GCNNNNNNNGC	8 cut(s)	509, 935, 986, 1357, 1521, 1904, 1943, 2036
NarI	GGCGCC	1 cut(s)	2081
NcoI	CCATGG	1 cut(s)	2090
NdeI	CATATG	1 cut(s)	1453
NheI	GCTAGC	1 cut(s)	368
NlaIV	GGNNCC	5 cut(s)	334, 1114, 1626, 1627, 2082
NmuCI	GTSAC	2 cut(s)	361, 1718
NsbI	TGCGCA	2 cut(s)	224, 523
NsiI	ATGCAT	1 cut(s)	982
NspI	RCATGY	1 cut(s)	1702
OliI	CACNNNNGTG	1 cut(s)	1508
PaeI	GCATGC	1 cut(s)	1702
PagI	TCATGA	2 cut(s)	903, 1149
PaqCI	CACCTGC	1 cut(s)	527
PctI	GAATGC	1 cut(s)	1362
PfeI	GAWTC	9 cut(s)	8, 319, 653, 955, 1403, 1413, 1654, 1950, 2102
PflFI	GACNNNGTC	1 cut(s)	1673
PfoI	TCCNGGA	1 cut(s)	2062
PinAI	ACCGGT	1 cut(s)	34
PkrI	GCNGC	7 cut(s)	502, 878, 940, 1024, 1267, 1828, 2122
PleI	GAGTC	3 cut(s)	622, 1036, 1138
PluTI	GGCGCC	1 cut(s)	2084
PpsI	GAGTC	3 cut(s)	622, 1036, 1138
PpuMI	RGGWCCY	1 cut(s)	1625
PsiI	TTATAA	1 cut(s)	536
Psp124BI	GAGCTC	1 cut(s)	1390
Psp5II	RGGWCCY	1 cut(s)	1625
Psp6I	CCWGG	4 cut(s)	156, 335, 1923, 2062
PspFI	CCCAGC	2 cut(s)	1351, 1640
PspGI	CCWGG	4 cut(s)	156, 335, 1923, 2062
PspN4I	GGNNCC	5 cut(s)	334, 1114, 1626, 1627, 2082
PspPI	GGNCC	4 cut(s)	1513, 1523, 1625, 2005
PspPPI	RGGWCCY	1 cut(s)	1625
PstNI	CAGNNNCTG	1 cut(s)	1163
PsuI	RGATCY	1 cut(s)	782
PsyI	GACNNNGTC	1 cut(s)	1673
PvuII	CAGCTG	1 cut(s)	941
RsaI	GTAC	6 cut(s)	132, 311, 763, 883, 1646, 1958
RsaNI	GTAC	6 cut(s)	131, 310, 762, 882, 1645, 1957
RseI	CAYNNNNRTG	3 cut(s)	1508, 1727, 1740
SacI	GAGCTC	1 cut(s)	1390
SacII	CCGCGG	1 cut(s)	1026
SatI	GCNGC	7 cut(s)	501, 877, 939, 1023, 1266, 1827, 2121
Sau96I	GGNCC	4 cut(s)	1513, 1523, 1625, 2005
ScaI	AGTACT	1 cut(s)	763
SchI	GAGTC	3 cut(s)	622, 1037, 1138
ScrFI	CCNGG	4 cut(s)	158, 337, 1925, 2064
SduI	GDGCHC	3 cut(s)	1390, 1438, 1939
SfaNI	GCATC	7 cut(s)	467, 592, 733, 967, 1177, 1592, 1736
SfcI	CTRYAG	2 cut(s)	1155, 1899
SfiI	GGCCNNNNNGGCC	1 cut(s)	1521
SfoI	GGCGCC	1 cut(s)	2082
Sfr303I	CCGCGG	1 cut(s)	1026
SgrBI	CCGCGG	1 cut(s)	1026
SinI	GGWCC	2 cut(s)	1625, 2005
SmiMI	CAYNNNNRTG	3 cut(s)	1508, 1727, 1740
SmlI	CTYRAG	3 cut(s)	630, 688, 2126
SmoI	CTYRAG	3 cut(s)	630, 688, 2126
SphI	GCATGC	1 cut(s)	1702
SsiI	CCGC	3 cut(s)	876, 1023, 1025
SspDI	GGCGCC	1 cut(s)	2080
SspI	AATATT	2 cut(s)	565, 922
SspMI	CTAG	5 cut(s)	57, 369, 593, 1346, 1536
SstI	GAGCTC	1 cut(s)	1390
StyD4I	CCNGG	4 cut(s)	156, 335, 1923, 2062
StyI	CCWWGG	4 cut(s)	592, 1116, 2022, 2090
TaaI	ACNGT	6 cut(s)	151, 277, 571, 778, 1159, 1841
TaiI	ACGT	3 cut(s)	835, 1345, 1487
TatI	WGTACW	3 cut(s)	761, 881, 1956
TauI	GCSGC	2 cut(s)	879, 1025
TfiI	GAWTC	9 cut(s)	8, 319, 653, 955, 1403, 1413, 1654, 1950, 2102
TscAI	CASTG	4 cut(s)	957, 979, 1515, 1937
TseFI	GTSAC	2 cut(s)	361, 1718
TseI	GCWGC	5 cut(s)	500, 938, 1265, 1826, 2120
Tsp45I	GTSAC	2 cut(s)	361, 1718
TspDTI	ATGAA	4 cut(s)	426, 815, 1405, 1724
TspRI	CASTG	4 cut(s)	957, 979, 1515, 1937
Tth111I	GACNNNGTC	1 cut(s)	1673
VpaK11BI	GGWCC	2 cut(s)	1625, 2005
XagI	CCTNNNNNAGG	3 cut(s)	596, 1814, 2021
XapI	RAATTY	2 cut(s)	752, 817
XceI	RCATGY	1 cut(s)	1702
XmaJI	CCTAGG	1 cut(s)	592
XmiI	GTMKAC	3 cut(s)	869, 889, 1677
XspI	CTAG	5 cut(s)	57, 369, 593, 1346, 1536
ZrmI	AGTACT	1 cut(s)	763
Zsp2I	ATGCAT	1 cut(s)	982

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.