Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0006517

Physical Location & Seq

Genomic Coordinates Reverse (-)

81956539 .. 81959716

Gene Structure 3178 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00144040.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1788 bp

ATGAAGATGAAGCAAATTGAGCAGGAAAGTGGAAAGTGCTGTGTCGAGAGAAAACAAGTGATTTCATCACCATCGCCACCACCACCGCCTCCGCCACCACCATTCCCAAGGTTCTTGGCTAATCAGAGTGTTGTTGGGAGTGTGACAAAGCGAGAAATCGCCAGGTTCTGGACGCAGAAGCGCTTTAATGAGGAGGAGCACCTCCTCGCAGCGATCAAGGCTGCAGCACGCATTAGAGCCCGCAAACTCTCGGAGGAAGACTACAGATCTTTTGAGGAGTCCTTGAATGATGAAGACAACGATGGCAAGGATAGTGACGGCGCAGTCAAAATGAATGAGAACAATGATGAAATTCGTGTTGGAATAAAGGACTGGTTAGGTGGGGAATTTAGAATGCTACATCTGGTGAGACCATATCTTCGGTATCTGCCCCAAGCCGAATGTATACACGGCAGAAAGATCACCTTCAAAGAGAAATTCGTATTTACTGCAGCTTCACTGTTCATCTTTCGGGTTTGCAGTCAGTTTCCCCTCTATGGGATAGATTATTCTACGTTTAACAGATTTGATACATTTTACTGGATGCGTGCTATTCTGGCGACAAGTCCTACTGGCACTGTAATGGGGCTCGGTATAAGCCCCATTGTGACATCTGGAATGATCATGAGTTTCTTAGCCAGTTCAAAACTTATTCAAGTGAACAACAGAATCCGCGAGGATCTTGAACTGTTCAATGGGACACAGAAGTTGTTGGGATTCCTGATTGCTGTTGGTCAAGCTGTTACTTATGTGCTATCAGGAATGTACGGCAATGTAGGTTTTGTTAATGCCCTTCTCATCATAACTCAGCTTTCCTTAGCTGGAGTCATAGTGATGTGCTTAGATGAGCTTTTCCAAAAGGGATATGGTCTTATGTCATCTGCGAGCTCCCTTTTCGTCACTGCCAACATCTGCGAAAACATCATTTGGAAGGCTTTTAGCCCTGCAACTGTAAACAGCAGCCGAGGGGGAGCTCATGAGTTTAAAGGTGCACTCGTTGCTTTGTTCCATCTCATAATATCCAGGACAGACAAGACCAGTGCTATTCGAGAGGCTTTCTTTCGAGAACACCTACCAAACGTGACAAACGTACTTGCCACTGTCTTCATCTTTCTAATTGTTGTCTACTTGCAACGCTTTCATGTGGCTTTGAAAGTGAGATCAAAGGGAGCAGCGTCATCATATCCTATTAAGCTCTTCTATACTTCTAACATGCCCATCAATCTCCAATCCGCTCTTGTCTCGAATCTTTGTTTTGTATCTCATTTTCTTTACAAGAGGTACAAAGGGAATAATTTCTTGGTGAATCTCATGGGGAAGTGGAAGGAATCTGGCCAGCTCAATATTCTCATTGGTGGTCTAGCTTACTATGTCACTGCACCAGCAAGCTTGGCAGATATGGCAGCCGATCCCATCCACGCAATGTTTTATCTAGTCTTTATGCTTGCAACATGTGCATTGCTATCGAAAACTTGGATCCGATTCTCTGGTTCTTCTGCGAGTGACTTAGCAAAGCAACTCAAGGAACAAAACATGGGGATTCATGGACATAAAGACTCGAGCCTAGAGAAGAAACTTAATAGCAATGTACCTATTGCGGCTGCGCTTGGAGGAATGTGCATTGGTGCCTTGACTTTTGTGGCAGATCTCATGGGAGCAATGGGATCAGGAGCTGGGATTTTGCTTGCTGTTACAGTCATATATCAGTGTTGCGAGACATATGAGGTCAAAGAGTGCTACGGCAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006605 GO:0006612 GO:0006620 GO:0006810 GO:0006886 GO:0008104 GO:0008150 GO:0008320 GO:0008565 GO:0012505 GO:0015031 GO:0015399 GO:0015405 GO:0015450 GO:0015833 GO:0022804 GO:0022857 GO:0022884 GO:0031204 GO:0033036 GO:0033365 GO:0034613 GO:0042886 GO:0042887 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045047 GO:0045184 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0065002 GO:0070727 GO:0070972 GO:0071702 GO:0071705 GO:0071806 GO:0072594 GO:0072599 GO:0072657 GO:0090150 GO:1904680

KEGG Pathways

Metabolic & Signaling

ko03060 ko04141 ko04145 ko05110 map03060 map04141 map04145 map05110

Pfam Domains

Protein Families

Plug_translocon SecY

Protein Analysis

595

Amino Acids

66.01

Weight (kDa)

9.11

Isoelectric Point (pI)

38.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Plug_translocon	PF10559	168 - 200	3.2e-09	Plug domain of Sec61p
SecY	PF00344	206 - 583	1.5e-59	SecY

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006517)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78720 AT1G78720 AT1G78720
fragaria_vesca	FvH4_1g11090
malus_domestica	MD10G1274900.v1.1
prunus_persica	Prupe.4G067500_v2.0.a1
pyrus_communis	pycom10g22950
rosa_chinensis	RchiOBHm_Chr2g0098361 RchiOBHm_Chr5g0011881
rosa_laevigata	RLG00000016794 RLG00000031865
rosa_multiflora	Rmu_co8311821.1_g000001 Rmu_sc0001475.1_g000010 Rmu_sc0042416.1_g000001
rosa_roxburghii	Rroxscaffold_1G00064720 Rroxscaffold_2G00144040
rosa_rugosa	Rorug02G0072500 Rorug04G0459500
rosa_samantha	Rh2AG119600 Rh2BG122700 Rh2CG124300 Rh2DG124400 Rh5AG091000 Rh5DG087200
rosa_wichuraiana	Rw2G009370 Rw5G007950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	323
AccB1I	GGYRCC	1 cut(s)	1664
AccB7I	CCANNNNNTGG	1 cut(s)	168
AccBSI	CCGCTC	1 cut(s)	1274
AccI	GTMKAC	2 cut(s)	445, 1164
AccII	CGCG	1 cut(s)	714
AciI	CCGC	6 cut(s)	86, 92, 241, 712, 1272, 1637
AclWI	GGATC	5 cut(s)	726, 1442, 1510, 1523, 1711
AcoI	YGGCCR	1 cut(s)	1372
AcsI	RAATTY	3 cut(s)	351, 386, 476
AfaI	GTAC	4 cut(s)	806, 1131, 1322, 1629
AfeI	AGCGCT	1 cut(s)	182
AfiI	CCNNNNNNNGG	3 cut(s)	168, 536, 537
AflIII	ACRYGT	1 cut(s)	1490
AgsI	TTSAA	7 cut(s)	286, 469, 684, 695, 725, 733, 1192
AjnI	CCWGG	2 cut(s)	161, 1061
AjuI	GAANNNNNNNTTGG	4 cut(s)	342, 374, 1322, 1354
Alw21I	GWGCWC	4 cut(s)	201, 929, 1015, 1033
Alw26I	GTCTC	3 cut(s)	403, 1285, 1748
Alw44I	GTGCAC	1 cut(s)	1029
AlwI	GGATC	5 cut(s)	726, 1442, 1510, 1523, 1711
AlwNI	CAGNNNCTG	2 cut(s)	168, 1712
Ama87I	CYCGRG	1 cut(s)	1597
Aor51HI	AGCGCT	1 cut(s)	182
AoxI	GGCC	1 cut(s)	1372
ApaLI	GTGCAC	1 cut(s)	1029
ApeKI	GCWGC	8 cut(s)	209, 221, 224, 491, 999, 1211, 1442, 1640
ApoI	RAATTY	3 cut(s)	351, 386, 476
ArsI	GACNNNNNNTTYG	2 cut(s)	402, 434
Asp700I	GAANNNNTTC	1 cut(s)	1334
AspLEI	GCGC	3 cut(s)	183, 323, 1645
AsuHPI	GGTGA	4 cut(s)	60, 418, 454, 1354
AvaI	CYCGRG	1 cut(s)	1597
BaeGI	GKGCMC	1 cut(s)	1033
BalI	TGGCCA	1 cut(s)	1374
BamHI	GGATCC	1 cut(s)	1515
BanI	GGYRCC	1 cut(s)	1664
BanII	GRGCYC	4 cut(s)	241, 630, 929, 1015
BbsI	GAAGAC	3 cut(s)	264, 300, 1135
Bbv12I	GWGCWC	4 cut(s)	201, 929, 1015, 1033
BbvI	GCAGC	8 cut(s)	208, 221, 236, 503, 1011, 1223, 1454, 1627
BccI	CCATC	5 cut(s)	79, 296, 1056, 1265, 1460
BceAI	ACGGC	3 cut(s)	334, 466, 823
BcgI	CGANNNNNNTGC	2 cut(s)	1485, 1519
BciT130I	CCWGG	2 cut(s)	163, 1063
BclI	TGATCA	1 cut(s)	660
BcoDI	GTCTC	3 cut(s)	403, 1285, 1748
BfaI	CTAG	3 cut(s)	1400, 1472, 1604
BfmI	CTRYAG	3 cut(s)	222, 262, 489
BfoI	RGCGCY	1 cut(s)	184
BglII	AGATCT	2 cut(s)	266, 1684
BisI	GCNGC	9 cut(s)	210, 222, 225, 492, 1000, 1212, 1443, 1638, 1641
BlsI	GCNGC	9 cut(s)	211, 223, 226, 493, 1001, 1213, 1444, 1639, 1642
Bme1390I	CCNGG	2 cut(s)	163, 1063
BmeT110I	CYCGRG	1 cut(s)	1597
BmiI	GGNNCC	2 cut(s)	1517, 1666
BmrFI	CCNGG	2 cut(s)	163, 1063
BmsI	GCATC	1 cut(s)	573
BpiI	GAAGAC	3 cut(s)	264, 300, 1135
BpmI	CTGGAG	1 cut(s)	882
Bpu10I	CCTNAGC	1 cut(s)	856
BpuEI	CTTGAG	1 cut(s)	1544
BsaI	GGTCTC	1 cut(s)	403
BsaJI	CCNNGG	2 cut(s)	107, 1003
BsaXI	ACNNNNNCTCC	2 cut(s)	855, 885
Bsc4I	CCNNNNNNNGG	3 cut(s)	168, 536, 537
Bse1I	ACTGG	5 cut(s)	377, 584, 616, 678, 1077
Bse3DI	GCAATG	5 cut(s)	817, 1467, 1496, 1630, 1704
BseBI	CCWGG	2 cut(s)	163, 1063
BseDI	CCNNGG	2 cut(s)	107, 1003
BseGI	GGATG	2 cut(s)	588, 1452
BseLI	CCNNNNNNNGG	3 cut(s)	168, 536, 537
BseMI	GCAATG	5 cut(s)	817, 1467, 1496, 1630, 1704
BseMII	CTCAG	1 cut(s)	860
BseNI	ACTGG	5 cut(s)	377, 584, 616, 678, 1077
BseRI	GAGGAG	4 cut(s)	194, 206, 209, 290
BseSI	GKGCMC	1 cut(s)	1033
BseXI	GCAGC	8 cut(s)	208, 221, 236, 503, 1011, 1223, 1454, 1627
BseYI	CCCAGC	1 cut(s)	1712
BsgI	GTGCAG	1 cut(s)	1401
Bsh1236I	CGCG	1 cut(s)	714
BshFI	GGCC	1 cut(s)	1374
BshNI	GGYRCC	1 cut(s)	1664
BsiHKAI	GWGCWC	4 cut(s)	201, 929, 1015, 1033
BsiHKCI	CYCGRG	1 cut(s)	1597
BslFI	GGGAC	1 cut(s)	751
BslI	CCNNNNNNNGG	3 cut(s)	168, 536, 537
BsmAI	GTCTC	3 cut(s)	403, 1285, 1748
BsmFI	GGGAC	1 cut(s)	751
BsmI	GAATGC	1 cut(s)	399
BsnI	GGCC	1 cut(s)	1374
Bso31I	GGTCTC	1 cut(s)	403
BsoBI	CYCGRG	1 cut(s)	1597
Bsp1286I	GDGCHC	6 cut(s)	201, 241, 630, 929, 1015, 1033
BspACI	CCGC	6 cut(s)	86, 92, 241, 712, 1272, 1637
BspANI	GGCC	1 cut(s)	1374
BspCNI	CTCAG	1 cut(s)	859
BspFNI	CGCG	1 cut(s)	714
BspHI	TCATGA	2 cut(s)	663, 1015
BspLI	GGNNCC	2 cut(s)	1517, 1666
BspMAI	CTGCAG	2 cut(s)	226, 493
BspPI	GGATC	5 cut(s)	726, 1442, 1510, 1523, 1711
BspQI	GCTCTTC	1 cut(s)	1241
BspT107I	GGYRCC	1 cut(s)	1664
BspTNI	GGTCTC	1 cut(s)	403
BsrBI	CCGCTC	1 cut(s)	1274
BsrDI	GCAATG	5 cut(s)	817, 1467, 1496, 1630, 1704
BsrI	ACTGG	5 cut(s)	377, 584, 616, 678, 1077
BssECI	CCNNGG	2 cut(s)	107, 1003
BssNAI	GTATAC	1 cut(s)	446
BssT1I	CCWWGG	1 cut(s)	107
Bst1107I	GTATAC	1 cut(s)	446
Bst2UI	CCWGG	2 cut(s)	163, 1063
Bst4CI	ACNGT	6 cut(s)	501, 619, 729, 991, 1141, 1735
Bst6I	CTCTTC	1 cut(s)	1241
BstAPI	GCANNNNNTGC	2 cut(s)	1037, 1493
BstC8I	GCNNGC	8 cut(s)	229, 241, 588, 925, 1376, 1426, 1485, 1725
BstDEI	CTNAG	5 cut(s)	673, 846, 856, 880, 1546
BstF5I	GGATG	2 cut(s)	588, 1452
BstFNI	CGCG	1 cut(s)	714
BstH2I	RGCGCY	1 cut(s)	184
BstHHI	GCGC	3 cut(s)	183, 323, 1645
BstMAI	GTCTC	3 cut(s)	403, 1285, 1748
BstMWI	GCNNNNNNNGC	7 cut(s)	19, 218, 596, 1037, 1430, 1439, 1493
BstNI	CCWGG	2 cut(s)	163, 1063
BstNSI	RCATGY	2 cut(s)	1255, 1494
BstSCI	CCNGG	2 cut(s)	161, 1061
BstSFI	CTRYAG	3 cut(s)	222, 262, 489
BstSLI	GKGCMC	1 cut(s)	1033
BstUI	CGCG	1 cut(s)	714
BstV1I	GCAGC	8 cut(s)	208, 221, 236, 503, 1011, 1223, 1454, 1627
BstV2I	GAAGAC	3 cut(s)	264, 300, 1135
BstX2I	RGATCY	4 cut(s)	266, 718, 1515, 1684
BstYI	RGATCY	4 cut(s)	266, 718, 1515, 1684
BstZ17I	GTATAC	1 cut(s)	446
BsuRI	GGCC	1 cut(s)	1374
BtgZI	GCGATG	1 cut(s)	57
BtsCI	GGATG	2 cut(s)	588, 1452
BtsI	GCAGTG	2 cut(s)	939, 1413
BtsIMutI	CAGTG	7 cut(s)	497, 615, 939, 1084, 1137, 1413, 1751
Cac8I	GCNNGC	8 cut(s)	229, 241, 588, 925, 1376, 1426, 1485, 1725
CaiI	CAGNNNCTG	2 cut(s)	168, 1712
CciI	TCATGA	2 cut(s)	663, 1015
CfoI	GCGC	3 cut(s)	183, 323, 1645
CseI	GACGC	2 cut(s)	181, 1203
Csp6I	GTAC	4 cut(s)	805, 1130, 1321, 1628
CviAII	CATG	9 cut(s)	664, 1016, 1181, 1252, 1351, 1491, 1573, 1583, 1690
CviQI	GTAC	4 cut(s)	805, 1130, 1321, 1628
DdeI	CTNAG	5 cut(s)	673, 846, 856, 880, 1546
DraI	TTTAAA	1 cut(s)	1024
DrdI	GACNNNNNNGTC	1 cut(s)	323
DseDI	GACNNNNNNGTC	1 cut(s)	323
EaeI	YGGCCR	1 cut(s)	1372
Eam1104I	CTCTTC	1 cut(s)	1241
EarI	CTCTTC	1 cut(s)	1241
EciI	GGCGGA	1 cut(s)	81
Ecl136II	GAGCTC	2 cut(s)	927, 1013
Eco130I	CCWWGG	1 cut(s)	107
Eco24I	GRGCYC	4 cut(s)	241, 630, 929, 1015
Eco31I	GGTCTC	1 cut(s)	403
Eco47III	AGCGCT	1 cut(s)	182
Eco53kI	GAGCTC	2 cut(s)	927, 1013
Eco88I	CYCGRG	1 cut(s)	1597
EcoICRI	GAGCTC	2 cut(s)	927, 1013
EcoRII	CCWGG	2 cut(s)	161, 1061
EcoT14I	CCWWGG	1 cut(s)	107
EcoT38I	GRGCYC	4 cut(s)	241, 630, 929, 1015
ErhI	CCWWGG	1 cut(s)	107
FaeI	CATG	9 cut(s)	667, 1019, 1184, 1255, 1354, 1494, 1576, 1586, 1693
FalI	AAGNNNNNCTT	2 cut(s)	449, 481
FaqI	GGGAC	1 cut(s)	751
FatI	CATG	9 cut(s)	663, 1015, 1180, 1251, 1350, 1490, 1572, 1582, 1689
FauI	CCCGC	1 cut(s)	248
FauNDI	CATATG	1 cut(s)	1759
FbaI	TGATCA	1 cut(s)	660
FblI	GTMKAC	2 cut(s)	445, 1164
Fnu4HI	GCNGC	9 cut(s)	210, 222, 225, 492, 1000, 1212, 1443, 1638, 1641
FokI	GGATG	2 cut(s)	595, 1439
FriOI	GRGCYC	4 cut(s)	241, 630, 929, 1015
Fsp4HI	GCNGC	9 cut(s)	210, 222, 225, 492, 1000, 1212, 1443, 1638, 1641
FspBI	CTAG	3 cut(s)	1400, 1472, 1604
GlaI	GCGC	3 cut(s)	182, 322, 1644
GluI	GCNGC	9 cut(s)	210, 222, 225, 492, 1000, 1212, 1443, 1638, 1641
GsaI	CCCAGC	1 cut(s)	1716
GsuI	CTGGAG	1 cut(s)	882
HaeII	RGCGCY	1 cut(s)	184
HaeIII	GGCC	1 cut(s)	1374
HgaI	GACGC	2 cut(s)	181, 1203
HhaI	GCGC	3 cut(s)	183, 323, 1645
Hin1II	CATG	9 cut(s)	667, 1019, 1184, 1255, 1354, 1494, 1576, 1586, 1693
Hin6I	GCGC	3 cut(s)	181, 321, 1643
HinP1I	GCGC	3 cut(s)	181, 321, 1643
HindIII	AAGCTT	1 cut(s)	1426
HphI	GGTGA	4 cut(s)	60, 418, 454, 1354
Hpy166II	GTNNAC	5 cut(s)	446, 700, 994, 1031, 1165
Hpy188I	TCNGA	3 cut(s)	126, 253, 1520
Hpy8I	GTNNAC	5 cut(s)	446, 700, 994, 1031, 1165
HpyAV	CCTTC	4 cut(s)	475, 842, 964, 1357
HpyCH4III	ACNGT	6 cut(s)	501, 619, 729, 991, 1141, 1735
HpyCH4IV	ACGT	3 cut(s)	554, 1119, 1128
HpyF10VI	GCNNNNNNNGC	7 cut(s)	19, 218, 596, 1037, 1430, 1439, 1493
HpyF3I	CTNAG	5 cut(s)	673, 846, 856, 880, 1546
HpySE526I	ACGT	3 cut(s)	554, 1119, 1128
Hsp92II	CATG	9 cut(s)	667, 1019, 1184, 1255, 1354, 1494, 1576, 1586, 1693
HspAI	GCGC	3 cut(s)	181, 321, 1643
Ksp22I	TGATCA	1 cut(s)	660
LguI	GCTCTTC	1 cut(s)	1241
LmnI	GCTCC	6 cut(s)	196, 932, 1010, 1208, 1694, 1709
Lsp1109I	GCAGC	8 cut(s)	208, 221, 236, 503, 1011, 1223, 1454, 1627
LweI	GCATC	1 cut(s)	573
MaeI	CTAG	3 cut(s)	1400, 1472, 1604
MaeII	ACGT	3 cut(s)	554, 1119, 1128
MaeIII	GTNAC	9 cut(s)	142, 314, 646, 781, 937, 1120, 1411, 1541, 1729
MbiI	CCGCTC	1 cut(s)	1274
MboII	GAAGA	8 cut(s)	16, 269, 305, 410, 1135, 1228, 1524, 1621
MflI	RGATCY	4 cut(s)	266, 718, 1515, 1684
MhlI	GDGCHC	6 cut(s)	201, 241, 630, 929, 1015, 1033
MlsI	TGGCCA	1 cut(s)	1374
MluCI	AATT	6 cut(s)	15, 351, 386, 476, 1155, 1333
MluNI	TGGCCA	1 cut(s)	1374
MlyI	GAGTC	3 cut(s)	287, 873, 1589
MmeI	TCCRAC	1 cut(s)	340
Mox20I	TGGCCA	1 cut(s)	1374
MroXI	GAANNNNTTC	1 cut(s)	1334
MscI	TGGCCA	1 cut(s)	1374
MseI	TTAA	6 cut(s)	186, 558, 825, 1023, 1230, 1617
MslI	CAYNNNNRTG	2 cut(s)	620, 872
Msp20I	TGGCCA	1 cut(s)	1374
MspR9I	CCNGG	2 cut(s)	163, 1063
Mva1269I	GAATGC	1 cut(s)	399
MvaI	CCWGG	2 cut(s)	163, 1063
MvnI	CGCG	1 cut(s)	714
MwoI	GCNNNNNNNGC	7 cut(s)	19, 218, 596, 1037, 1430, 1439, 1493
NdeI	CATATG	1 cut(s)	1759
NlaIII	CATG	9 cut(s)	667, 1019, 1184, 1255, 1354, 1494, 1576, 1586, 1693
NlaIV	GGNNCC	2 cut(s)	1517, 1666
NmeAIII	GCCGAG	1 cut(s)	1028
NmuCI	GTSAC	7 cut(s)	142, 314, 646, 937, 1120, 1411, 1541
NspI	RCATGY	2 cut(s)	1255, 1494
PaeR7I	CTCGAG	1 cut(s)	1597
PagI	TCATGA	2 cut(s)	663, 1015
PciI	ACATGT	1 cut(s)	1490
PciSI	GCTCTTC	1 cut(s)	1241
PcsI	WCGNNNNNNNCGW	1 cut(s)	1125
PctI	GAATGC	1 cut(s)	399
PdmI	GAANNNNTTC	1 cut(s)	1334
PfeI	GAWTC	7 cut(s)	708, 756, 1285, 1345, 1367, 1521, 1579
PflMI	CCANNNNNTGG	1 cut(s)	168
PfoI	TCCNGGA	1 cut(s)	1061
PkrI	GCNGC	9 cut(s)	211, 223, 226, 493, 1001, 1213, 1444, 1639, 1642
PleI	GAGTC	3 cut(s)	286, 872, 1589
PpsI	GAGTC	3 cut(s)	286, 872, 1589
PscI	ACATGT	1 cut(s)	1490
Psp124BI	GAGCTC	2 cut(s)	929, 1015
Psp6I	CCWGG	2 cut(s)	161, 1061
PspFI	CCCAGC	1 cut(s)	1712
PspGI	CCWGG	2 cut(s)	161, 1061
PspN4I	GGNNCC	2 cut(s)	1517, 1666
PspXI	VCTCGAGB	1 cut(s)	1597
PstI	CTGCAG	2 cut(s)	226, 493
PstNI	CAGNNNCTG	2 cut(s)	168, 1712
PsuI	RGATCY	4 cut(s)	266, 718, 1515, 1684
RsaI	GTAC	4 cut(s)	806, 1131, 1322, 1629
RsaNI	GTAC	4 cut(s)	805, 1130, 1321, 1628
RseI	CAYNNNNRTG	2 cut(s)	620, 872
SacI	GAGCTC	2 cut(s)	929, 1015
SapI	GCTCTTC	1 cut(s)	1241
SaqAI	TTAA	6 cut(s)	186, 558, 825, 1023, 1230, 1617
SatI	GCNGC	9 cut(s)	210, 222, 225, 492, 1000, 1212, 1443, 1638, 1641
SchI	GAGTC	3 cut(s)	287, 873, 1589
ScrFI	CCNGG	2 cut(s)	163, 1063
SduI	GDGCHC	6 cut(s)	201, 241, 630, 929, 1015, 1033
SfaNI	GCATC	1 cut(s)	573
SfcI	CTRYAG	3 cut(s)	222, 262, 489
Sfr274I	CTCGAG	1 cut(s)	1597
SlaI	CTCGAG	1 cut(s)	1597
SmiMI	CAYNNNNRTG	2 cut(s)	620, 872
SmlI	CTYRAG	2 cut(s)	1559, 1597
SmoI	CTYRAG	2 cut(s)	1559, 1597
Sse9I	AATT	6 cut(s)	15, 351, 386, 476, 1155, 1333
SsiI	CCGC	6 cut(s)	86, 92, 241, 712, 1272, 1637
SspI	AATATT	1 cut(s)	1384
SspMI	CTAG	3 cut(s)	1400, 1472, 1604
SstI	GAGCTC	2 cut(s)	929, 1015
StyD4I	CCNGG	2 cut(s)	161, 1061
StyI	CCWWGG	1 cut(s)	107
TaaI	ACNGT	6 cut(s)	501, 619, 729, 991, 1141, 1735
TaiI	ACGT	3 cut(s)	557, 1122, 1131
TaqI	TCGA	6 cut(s)	45, 1087, 1102, 1283, 1505, 1598
TasI	AATT	6 cut(s)	15, 351, 386, 476, 1155, 1333
TauI	GCSGC	1 cut(s)	1640
TfiI	GAWTC	7 cut(s)	708, 756, 1285, 1345, 1367, 1521, 1579
Tru1I	TTAA	6 cut(s)	186, 558, 825, 1023, 1230, 1617
Tru9I	TTAA	6 cut(s)	186, 558, 825, 1023, 1230, 1617
TscAI	CASTG	7 cut(s)	504, 622, 946, 1084, 1144, 1420, 1751
TseFI	GTSAC	7 cut(s)	142, 314, 646, 937, 1120, 1411, 1541
TseI	GCWGC	8 cut(s)	209, 221, 224, 491, 999, 1211, 1442, 1640
Tsp45I	GTSAC	7 cut(s)	142, 314, 646, 937, 1120, 1411, 1541
TspRI	CASTG	7 cut(s)	504, 622, 946, 1084, 1144, 1420, 1751
Van91I	CCANNNNNTGG	1 cut(s)	168
VneI	GTGCAC	1 cut(s)	1029
XapI	RAATTY	3 cut(s)	351, 386, 476
XceI	RCATGY	2 cut(s)	1255, 1494
XcmI	CCANNNNNNNNNTGG	1 cut(s)	902
XhoI	CTCGAG	1 cut(s)	1597
XmiI	GTMKAC	2 cut(s)	445, 1164
XmnI	GAANNNNTTC	1 cut(s)	1334
XspI	CTAG	3 cut(s)	1400, 1472, 1604

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.