Rroxscaffold_3G00263710

Sterol 3-beta-glucosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
Physical Location & Seq
Forward (+)
57568019 .. 57573202
5184 bp
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UTR
Exon/CDS
Intron
Rroxscaffold_3G00263710.1

Sequence Viewer

Length: 195 bp
ATGGTTAAAAATAAAGGCTTCTTGCCGTCAGGTCCTTCGGAGATTCCTATTCAGCGTAACCAAATAAAGGAAATTATATATTCCTTACTTCCAGCTTGCAAAGAGCCTGATGTAGATTCTGGTATTCCCTTTAAAGAGGATGCAATTATTGCAAACCCCCCAGCATATGGGAGCAGGATGGCTCCAGAAGAATAA

Protein Analysis

64

Amino Acids

7.01

Weight (kDa)

4.99

Isoelectric Point (pI)

66.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 167
AfiI CCNNNNNNNGG 2 cut(s) 67, 167
AluBI AGCT 1 cut(s) 95
AluI AGCT 1 cut(s) 95
AspS9I GGNCC 1 cut(s) 32
AvaII GGWCC 1 cut(s) 32
BccI CCATC 1 cut(s) 172
BceAI ACGGC 1 cut(s) 10
Bme18I GGWCC 1 cut(s) 32
BmgT120I GGNCC 1 cut(s) 32
BmiI GGNNCC 1 cut(s) 183
BmsI GCATC 1 cut(s) 130
BpmI CTGGAG 1 cut(s) 168
Bsc4I CCNNNNNNNGG 2 cut(s) 67, 167
BseGI GGATG 2 cut(s) 145, 183
BseLI CCNNNNNNNGG 2 cut(s) 67, 167
BseYI CCCAGC 1 cut(s) 160
BslI CCNNNNNNNGG 2 cut(s) 67, 167
BspLI GGNNCC 1 cut(s) 183
BstAPI GCANNNNNTGC 1 cut(s) 149
BstC8I GCNNGC 1 cut(s) 97
BstF5I GGATG 2 cut(s) 145, 183
BstMWI GCNNNNNNNGC 1 cut(s) 149
BtsCI GGATG 2 cut(s) 145, 183
Cac8I GCNNGC 1 cut(s) 97
Cfr13I GGNCC 1 cut(s) 32
CviJI RGCY 4 cut(s) 18, 95, 106, 182
CviKI_1 RGCY 4 cut(s) 18, 95, 106, 182
DraI TTTAAA 1 cut(s) 133
Eco47I GGWCC 1 cut(s) 32
EcoO109I RGGNCCY 1 cut(s) 32
FaiI YATR 4 cut(s) 77, 79, 166, 168
FauNDI CATATG 1 cut(s) 166
FokI GGATG 2 cut(s) 152, 190
GsaI CCCAGC 1 cut(s) 164
GsuI CTGGAG 1 cut(s) 168
HinfI GANTC 2 cut(s) 43, 116
Hpy188I TCNGA 1 cut(s) 40
Hpy188III TCNNGA 1 cut(s) 185
HpyAV CCTTC 1 cut(s) 45
HpyCH4V TGCA 3 cut(s) 99, 143, 152
HpyF10VI GCNNNNNNNGC 1 cut(s) 149
LmnI GCTCC 2 cut(s) 171, 187
LpnPI CCDG 6 cut(s) 15, 105, 105, 120, 160, 174
LweI GCATC 1 cut(s) 130
MaeIII GTNAC 1 cut(s) 56
MluCI AATT 2 cut(s) 72, 144
MnlI CCTC 1 cut(s) 130
MseI TTAA 2 cut(s) 6, 132
MwoI GCNNNNNNNGC 1 cut(s) 149
NdeI CATATG 1 cut(s) 166
NlaIV GGNNCC 1 cut(s) 183
PfeI GAWTC 2 cut(s) 43, 116
PflMI CCANNNNNTGG 1 cut(s) 167
PpuMI RGGWCCY 1 cut(s) 32
Psp5II RGGWCCY 1 cut(s) 32
PspFI CCCAGC 1 cut(s) 160
PspN4I GGNNCC 1 cut(s) 183
PspPI GGNCC 1 cut(s) 32
PspPPI RGGWCCY 1 cut(s) 32
SaqAI TTAA 2 cut(s) 6, 132
Sau96I GGNCC 1 cut(s) 32
SetI ASST 2 cut(s) 34, 97
SfaNI GCATC 1 cut(s) 130
SgeI CNNG 8 cut(s) 34, 42, 104, 108, 119, 132, 173, 187
SinI GGWCC 1 cut(s) 32
Sse9I AATT 2 cut(s) 72, 144
TasI AATT 2 cut(s) 72, 144
TfiI GAWTC 2 cut(s) 43, 116
Tru1I TTAA 2 cut(s) 6, 132
Tru9I TTAA 2 cut(s) 6, 132
Van91I CCANNNNNTGG 1 cut(s) 167
VpaK11BI GGWCC 1 cut(s) 32
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.