Rh4BG188100

Encoded by

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
Physical Location & Seq
Reverse (-)
32800894 .. 32803622
2729 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG188100.1

Sequence Viewer

Length: 222 bp
ATGTTTGATAATTGGGAATGGGCTGTCCAGATTCGTGATATTCAAAGCTTGTTCCAGCGATTGGCCGATTTTGATTCGCATGCAAGAGCAAAACTGGGGCAAGTTGAGGGGGAAACACGTGTCGGTGTGTTTGCTGCAAGATCAATAGAAGTCGGAGAGCCATTAACATATGATTATAGATACTTAGGTAGCAGGGTTGTGAAAAGAGTGCCCGAGTGTTAA

Protein Analysis

73

Amino Acids

8.48

Weight (kDa)

5.73

Isoelectric Point (pI)

39.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 61
AcoI YGGCCR 1 cut(s) 63
AcvI CACGTG 1 cut(s) 119
AfiI CCNNNNNNNGG 1 cut(s) 61
AflIII ACRYGT 2 cut(s) 116, 118
AgsI TTSAA 1 cut(s) 44
AluBI AGCT 1 cut(s) 48
AluI AGCT 1 cut(s) 48
Ama87I CYCGRG 1 cut(s) 212
AoxI GGCC 1 cut(s) 63
ApeKI GCWGC 1 cut(s) 134
AvaI CYCGRG 1 cut(s) 212
BaeGI GKGCMC 1 cut(s) 213
BaeI ACNNNNGTAYC 2 cut(s) 172, 205
BbrPI CACGTG 1 cut(s) 119
BbvI GCAGC 1 cut(s) 121
BisI GCNGC 1 cut(s) 135
BlsI GCNGC 1 cut(s) 136
BmeT110I CYCGRG 1 cut(s) 212
BmrI ACTGGG 1 cut(s) 104
BmuI ACTGGG 1 cut(s) 104
BsaAI YACGTR 1 cut(s) 119
Bsc4I CCNNNNNNNGG 1 cut(s) 61
Bse1I ACTGG 1 cut(s) 99
BseLI CCNNNNNNNGG 1 cut(s) 61
BseNI ACTGG 1 cut(s) 99
BseSI GKGCMC 1 cut(s) 213
BseXI GCAGC 1 cut(s) 121
BshFI GGCC 1 cut(s) 65
BsiHKCI CYCGRG 1 cut(s) 212
BslI CCNNNNNNNGG 1 cut(s) 61
BsnI GGCC 1 cut(s) 65
BsoBI CYCGRG 1 cut(s) 212
Bsp1286I GDGCHC 1 cut(s) 213
Bsp143I GATC 1 cut(s) 140
BspANI GGCC 1 cut(s) 65
BsrI ACTGG 1 cut(s) 99
BssMI GATC 1 cut(s) 140
BstBAI YACGTR 1 cut(s) 119
BstC8I GCNNGC 1 cut(s) 81
BstDEI CTNAG 1 cut(s) 184
BstKTI GATC 1 cut(s) 143
BstMBI GATC 1 cut(s) 140
BstNSI RCATGY 1 cut(s) 83
BstSLI GKGCMC 1 cut(s) 213
BstV1I GCAGC 1 cut(s) 121
BsuRI GGCC 1 cut(s) 65
Cac8I GCNNGC 1 cut(s) 81
CviAII CATG 1 cut(s) 80
CviJI RGCY 4 cut(s) 23, 48, 65, 160
CviKI_1 RGCY 4 cut(s) 23, 48, 65, 160
DdeI CTNAG 1 cut(s) 184
DpnI GATC 1 cut(s) 142
DpnII GATC 1 cut(s) 140
EaeI YGGCCR 1 cut(s) 63
Eco72I CACGTG 1 cut(s) 119
Eco88I CYCGRG 1 cut(s) 212
FaeI CATG 1 cut(s) 83
FaiI YATR 4 cut(s) 81, 169, 171, 177
FatI CATG 1 cut(s) 79
FauNDI CATATG 1 cut(s) 169
Fnu4HI GCNGC 1 cut(s) 135
Fsp4HI GCNGC 1 cut(s) 135
GluI GCNGC 1 cut(s) 135
HaeIII GGCC 1 cut(s) 65
Hin1II CATG 1 cut(s) 83
HindIII AAGCTT 1 cut(s) 46
HinfI GANTC 2 cut(s) 31, 74
Hpy188I TCNGA 1 cut(s) 155
Hpy188III TCNNGA 2 cut(s) 28, 35
HpyCH4IV ACGT 1 cut(s) 118
HpyCH4V TGCA 2 cut(s) 83, 137
HpyF3I CTNAG 1 cut(s) 184
HpySE526I ACGT 1 cut(s) 118
Hsp92II CATG 1 cut(s) 83
Kzo9I GATC 1 cut(s) 140
LpnPI CCDG 4 cut(s) 41, 68, 80, 178
Lsp1109I GCAGC 1 cut(s) 121
MaeII ACGT 1 cut(s) 118
MalI GATC 1 cut(s) 142
MboI GATC 1 cut(s) 140
MhlI GDGCHC 1 cut(s) 213
MluCI AATT 1 cut(s) 10
MmeI TCCRAC 1 cut(s) 133
MnlI CCTC 1 cut(s) 100
MseI TTAA 2 cut(s) 164, 220
NdeI CATATG 1 cut(s) 169
NdeII GATC 1 cut(s) 140
NlaIII CATG 1 cut(s) 83
NspI RCATGY 1 cut(s) 83
PaeI GCATGC 1 cut(s) 83
PfeI GAWTC 2 cut(s) 31, 74
PflMI CCANNNNNTGG 1 cut(s) 61
PkrI GCNGC 1 cut(s) 136
PmaCI CACGTG 1 cut(s) 119
PmlI CACGTG 1 cut(s) 119
Ppu21I YACGTR 1 cut(s) 119
PspCI CACGTG 1 cut(s) 119
SaqAI TTAA 2 cut(s) 164, 220
SatI GCNGC 1 cut(s) 135
Sau3AI GATC 1 cut(s) 140
SduI GDGCHC 1 cut(s) 213
SetI ASST 3 cut(s) 50, 121, 190
SphI GCATGC 1 cut(s) 83
Sse9I AATT 1 cut(s) 10
TaiI ACGT 1 cut(s) 121
TasI AATT 1 cut(s) 10
TfiI GAWTC 2 cut(s) 31, 74
Tru1I TTAA 2 cut(s) 164, 220
Tru9I TTAA 2 cut(s) 164, 220
TseI GCWGC 1 cut(s) 134
Van91I CCANNNNNTGG 1 cut(s) 61
XceI RCATGY 1 cut(s) 83
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.