Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0015111

Physical Location & Seq

Genomic Coordinates Forward (+)

316511 .. 317920

Gene Structure 1410 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00276860.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1410 bp

ATGATCAAGCTCTGTAGAATCCAACTACCCAAAGCCACCACCAGAATTTCAGACCTTCTCAACCGAAGGCGAAGCTGCTTGACTACAACGACAGCTGCTGGAAATTTGGATGTACAATCTCCTCCAAGTATCCCGGACCCGGAAACACTAGCAACCCAGTTGTCAAATTGCACTAGTTTTAGGCTATCTGAACTGAACCAAATCTATGCCCACGTTATCAGAACCCAATTCCTACATCTCCACCCAGCCCCATTTCACTGGAACAATATCATAAGGTCATACACCAGACGCGATGCTCCTACCAAGTCGCTCTTTGTTTACGTTTCTATGTCACGCGCCGGTGTTTTACCCGACTGCTACACCATCCCCATTGTTTTGAAAACACTGTGTCAGCTTTTTGCTGTGGAGATCGGCAGGCAGCTTCATTCTGTGGCTGTGAGGATTGGGCTCGACTCAAATGAGTACTGTGAGAGTGGGTTTATTAACTTGTATTCCAAGGCGGGAGAGTTTGAGAATGCACGGAACGTGTTCGATCAAAACCCTGACAGAAAGCTGGGTTCTTGGAATGCCGTCATTGCGGGGCTTTCGCAAGGCGGGCGTGCTAGGGAAGCTGTAGAGATGTTTATAGAGCTTAGGAAATGCGGGTTACTGCCGGATGATGTGACCATGGTTAGTGTCACGTCAGCCTGTGGTGCTCTGGGTGACTTGGGGTTGGCTCTTCAGTTGCATAAGTGTGTTTATCAAGCTGAAATCGTTGCGGAGAAATCGGATGTGCTGATGTTGAATTCGCTTGTTGATATGTATGGGAAATGTGGGAGGATGGACTTGGCTTCCAGGGTGTTTTCGAGGATGGAGCAACAGAATGTGTCGTCGTGGACCTCGATGATTGTGGGGTATGGGATGCACGGGCATGTGGATGAGGCGCTGGAATGCTTTCGGTGCATGAGAGAGGCGGGAGTGAGGCCGAACCATGTGACCTTTGTTGGCGTGCTCAGTGCATGTGTTCATGGGGGGACGGTGCAAGAGGGGAGATATTACTTTGAAATGATGAAGAAGGATTATGGGATAAACCCTCGCTTGCAGCATTATGGATGCATGGTGGATCTTCTTGGCAGAGCGGGGTTGCTTGAGGAGGCCAGGAAAATGGTGGAAGACATGCCGATGAAAGCAAGTTCGGCAGTCTGGGGCTGCCTGATGGGAGCCTGTGAGAAATATGGGAATGTGAAGATGGGGGAGTGGGTGGCTAAGCATTTGCAAGAACTAGAGCCATGGAATGATGGGGCTTTTGTGGTTTTATCTAATATCTATGCCAGTAGAGGTTTATGGAAAGAGGTTGAGAGGGTAAGACGGATTATGCACCAGAGAAAGCTTGCTAAGGTTCCTGGTTATAGCTTGGCAGGTGCAGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

469

Amino Acids

52.43

Weight (kDa)

8.51

Isoelectric Point (pI)

43.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	187 - 228	2.3e-06	PPR repeat family
PPR_2	PF13041	288 - 335	2.2e-10	PPR repeat family
PPR	PF01535	291 - 320	3.3e-08	PPR repeat
E_motif	PF20431	405 - 464	4.3e-16	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015111)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77170
fragaria_vesca	FvH4_7g33970
malus_domestica	MD01G1235900.v1.1
prunus_persica	Prupe.2G326000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0384201
rosa_laevigata	RLG00000026060
rosa_multiflora	Rmu_co8317187.1_g000001 Rmu_sc0005139.1_g000005 Rmu_sc0014578.1_g000005
rosa_roxburghii	Rroxscaffold_4G00276860
rosa_rugosa	Rorug01G0445700
rosa_samantha	Rh1AG471200 Rh1BG429000 Rh1CG441600 Rh1DG461700
rosa_wichuraiana	Rw1G040130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1388
Acc36I	ACCTGC	1 cut(s)	1388
AccBSI	CCGCTC	1 cut(s)	1118
AccII	CGCG	2 cut(s)	291, 336
AciI	CCGC	7 cut(s)	500, 578, 594, 642, 758, 953, 1118
AclWI	GGATC	1 cut(s)	1110
AcsI	RAATTY	3 cut(s)	45, 103, 784
AcuI	CTGAAG	1 cut(s)	704
AfaI	GTAC	2 cut(s)	114, 464
AfiI	CCNNNNNNNGG	1 cut(s)	139
AflIII	ACRYGT	1 cut(s)	525
AgsI	TTSAA	3 cut(s)	379, 784, 1043
AhlI	ACTAGT	1 cut(s)	173
AjiI	CACGTC	1 cut(s)	681
AjnI	CCWGG	3 cut(s)	833, 1136, 1381
Alw21I	GWGCWC	2 cut(s)	697, 993
AlwI	GGATC	1 cut(s)	1110
AlwNI	CAGNNNCTG	1 cut(s)	98
AoxI	GGCC	2 cut(s)	962, 1134
ApeKI	GCWGC	5 cut(s)	75, 95, 418, 1081, 1188
ApoI	RAATTY	3 cut(s)	45, 103, 784
Asp700I	GAANNNNTTC	2 cut(s)	527, 933
AspLEI	GCGC	2 cut(s)	338, 925
AspS9I	GGNCC	2 cut(s)	136, 876
AsuC2I	CCSGG	2 cut(s)	134, 140
AsuHPI	GGTGA	1 cut(s)	713
AvaII	GGWCC	2 cut(s)	136, 876
BanII	GRGCYC	1 cut(s)	450
BbsI	GAAGAC	1 cut(s)	1158
Bbv12I	GWGCWC	2 cut(s)	697, 993
BbvI	GCAGC	5 cut(s)	62, 82, 430, 1093, 1175
BccI	CCATC	6 cut(s)	371, 814, 844, 1189, 1222, 1271
BceAI	ACGGC	1 cut(s)	554
BciT130I	CCWGG	3 cut(s)	835, 1138, 1383
BciVI	GTATCC	1 cut(s)	140
BclI	TGATCA	1 cut(s)	3
BcnI	CCSGG	2 cut(s)	134, 140
BcuI	ACTAGT	1 cut(s)	173
BfaI	CTAG	4 cut(s)	149, 174, 603, 1262
BfmI	CTRYAG	2 cut(s)	13, 612
BfoI	RGCGCY	1 cut(s)	926
BfuAI	ACCTGC	1 cut(s)	1388
BfuI	GTATCC	1 cut(s)	140
BisI	GCNGC	5 cut(s)	76, 96, 419, 1082, 1189
BlpI	GCTNAGC	1 cut(s)	1245
BlsI	GCNGC	5 cut(s)	77, 97, 420, 1083, 1190
BmcAI	AGTACT	1 cut(s)	464
Bme1390I	CCNGG	5 cut(s)	134, 140, 835, 1138, 1383
Bme18I	GGWCC	2 cut(s)	136, 876
BmgBI	CACGTC	1 cut(s)	681
BmgT120I	GGNCC	2 cut(s)	136, 876
BmiI	GGNNCC	3 cut(s)	138, 1201, 1380
BmrFI	CCNGG	5 cut(s)	134, 140, 835, 1138, 1383
BmrI	ACTGGG	1 cut(s)	151
BmsI	GCATC	3 cut(s)	283, 891, 1082
BmuI	ACTGGG	1 cut(s)	151
BpiI	GAAGAC	1 cut(s)	1158
Bpu10I	CCTNAGC	2 cut(s)	632, 1374
Bpu1102I	GCTNAGC	1 cut(s)	1245
BpuEI	CTTGAG	1 cut(s)	1148
BpuMI	CCSGG	2 cut(s)	134, 140
BsaJI	CCNNGG	4 cut(s)	495, 666, 834, 1268
Bsc4I	CCNNNNNNNGG	1 cut(s)	139
Bse118I	RCCGGY	1 cut(s)	338
Bse1I	ACTGG	3 cut(s)	157, 263, 1311
Bse3DI	GCAATG	1 cut(s)	573
BseBI	CCWGG	3 cut(s)	835, 1138, 1383
BseDI	CCNNGG	4 cut(s)	495, 666, 834, 1268
BseGI	GGATG	9 cut(s)	115, 363, 661, 775, 825, 855, 906, 922, 1097
BseLI	CCNNNNNNNGG	1 cut(s)	139
BseMI	GCAATG	1 cut(s)	573
BseMII	CTCAG	1 cut(s)	1006
BseNI	ACTGG	3 cut(s)	157, 263, 1311
BseRI	GAGGAG	2 cut(s)	111, 1145
BseXI	GCAGC	5 cut(s)	62, 82, 430, 1093, 1175
BseYI	CCCAGC	2 cut(s)	244, 553
Bsh1236I	CGCG	2 cut(s)	291, 336
BshFI	GGCC	2 cut(s)	964, 1136
BsiHKAI	GWGCWC	2 cut(s)	697, 993
BsiSI	CCGG	4 cut(s)	134, 140, 339, 653
BslFI	GGGAC	1 cut(s)	1027
BslI	CCNNNNNNNGG	1 cut(s)	139
BsmFI	GGGAC	1 cut(s)	1027
BsmI	GAATGC	3 cut(s)	520, 571, 935
BsnI	GGCC	2 cut(s)	964, 1136
Bsp1286I	GDGCHC	3 cut(s)	450, 697, 993
Bsp1407I	TGTACA	1 cut(s)	112
Bsp143I	GATC	4 cut(s)	3, 408, 532, 1102
Bsp1720I	GCTNAGC	1 cut(s)	1245
Bsp19I	CCATGG	2 cut(s)	666, 1268
BspACI	CCGC	7 cut(s)	500, 578, 594, 642, 758, 953, 1118
BspANI	GGCC	2 cut(s)	964, 1136
BspCNI	CTCAG	1 cut(s)	1005
BspFNI	CGCG	2 cut(s)	291, 336
BspLI	GGNNCC	3 cut(s)	138, 1201, 1380
BspMI	ACCTGC	1 cut(s)	1388
BspPI	GGATC	1 cut(s)	1110
BspQI	GCTCTTC	1 cut(s)	723
BsrBI	CCGCTC	1 cut(s)	1118
BsrDI	GCAATG	1 cut(s)	573
BsrFI	RCCGGY	1 cut(s)	338
BsrGI	TGTACA	1 cut(s)	112
BsrI	ACTGG	3 cut(s)	157, 263, 1311
BssAI	RCCGGY	1 cut(s)	338
BssECI	CCNNGG	4 cut(s)	495, 666, 834, 1268
BssMI	GATC	4 cut(s)	3, 408, 532, 1102
BssT1I	CCWWGG	3 cut(s)	495, 666, 1268
Bst2UI	CCWGG	3 cut(s)	835, 1138, 1383
Bst4CI	ACNGT	3 cut(s)	387, 467, 1018
Bst6I	CTCTTC	1 cut(s)	723
BstAUI	TGTACA	1 cut(s)	112
BstC8I	GCNNGC	6 cut(s)	416, 596, 600, 989, 1079, 1371
BstDEI	CTNAG	4 cut(s)	632, 992, 1245, 1374
BstDSI	CCRYGG	2 cut(s)	666, 1268
BstF5I	GGATG	9 cut(s)	115, 363, 661, 775, 825, 855, 906, 922, 1097
BstFNI	CGCG	2 cut(s)	291, 336
BstH2I	RGCGCY	1 cut(s)	926
BstHHI	GCGC	2 cut(s)	338, 925
BstKTI	GATC	4 cut(s)	6, 411, 535, 1105
BstMBI	GATC	4 cut(s)	3, 408, 532, 1102
BstMWI	GCNNNNNNNGC	6 cut(s)	575, 595, 608, 692, 939, 1175
BstNI	CCWGG	3 cut(s)	835, 1138, 1383
BstNSI	RCATGY	3 cut(s)	914, 1002, 1159
BstSCI	CCNGG	5 cut(s)	132, 138, 833, 1136, 1381
BstSFI	CTRYAG	2 cut(s)	13, 612
BstUI	CGCG	2 cut(s)	291, 336
BstV1I	GCAGC	5 cut(s)	62, 82, 430, 1093, 1175
BstV2I	GAAGAC	1 cut(s)	1158
BstX2I	RGATCY	1 cut(s)	1102
BstXI	CCANNNNNNTGG	2 cut(s)	258, 1144
BstYI	RGATCY	1 cut(s)	1102
BsuI	GTATCC	1 cut(s)	140
BsuRI	GGCC	2 cut(s)	964, 1136
BtgI	CCRYGG	2 cut(s)	666, 1268
BtgZI	GCGATG	1 cut(s)	306
BtrI	CACGTC	1 cut(s)	681
BtsCI	GGATG	9 cut(s)	115, 363, 661, 775, 825, 855, 906, 922, 1097
BtsIMutI	CAGTG	3 cut(s)	256, 383, 1000
BveI	ACCTGC	1 cut(s)	1388
Cac8I	GCNNGC	6 cut(s)	416, 596, 600, 989, 1079, 1371
CaiI	CAGNNNCTG	1 cut(s)	98
CfoI	GCGC	2 cut(s)	338, 925
Cfr10I	RCCGGY	1 cut(s)	338
Cfr13I	GGNCC	2 cut(s)	136, 876
CseI	GACGC	1 cut(s)	297
Csp6I	GTAC	2 cut(s)	113, 463
CviAII	CATG	9 cut(s)	667, 911, 943, 971, 999, 1007, 1096, 1156, 1269
CviQI	GTAC	2 cut(s)	113, 463
DdeI	CTNAG	4 cut(s)	632, 992, 1245, 1374
DpnI	GATC	4 cut(s)	5, 410, 534, 1104
DpnII	GATC	4 cut(s)	3, 408, 532, 1102
Eam1104I	CTCTTC	1 cut(s)	723
EarI	CTCTTC	1 cut(s)	723
Eco130I	CCWWGG	3 cut(s)	495, 666, 1268
Eco24I	GRGCYC	1 cut(s)	450
Eco47I	GGWCC	2 cut(s)	136, 876
Eco57I	CTGAAG	1 cut(s)	704
EcoRI	GAATTC	1 cut(s)	784
EcoRII	CCWGG	3 cut(s)	833, 1136, 1381
EcoT14I	CCWWGG	3 cut(s)	495, 666, 1268
EcoT22I	ATGCAT	1 cut(s)	1097
EcoT38I	GRGCYC	1 cut(s)	450
ErhI	CCWWGG	3 cut(s)	495, 666, 1268
FaeI	CATG	9 cut(s)	670, 914, 946, 974, 1002, 1010, 1099, 1159, 1272
FalI	AAGNNNNNCTT	2 cut(s)	296, 328
FaqI	GGGAC	1 cut(s)	1027
FatI	CATG	9 cut(s)	666, 910, 942, 970, 998, 1006, 1095, 1155, 1268
FauI	CCCGC	6 cut(s)	493, 571, 587, 635, 946, 1111
FbaI	TGATCA	1 cut(s)	3
Fnu4HI	GCNGC	5 cut(s)	76, 96, 419, 1082, 1189
FokI	GGATG	9 cut(s)	122, 350, 668, 782, 832, 862, 913, 929, 1104
FriOI	GRGCYC	1 cut(s)	450
Fsp4HI	GCNGC	5 cut(s)	76, 96, 419, 1082, 1189
FspBI	CTAG	4 cut(s)	149, 174, 603, 1262
GlaI	GCGC	2 cut(s)	337, 924
GluI	GCNGC	5 cut(s)	76, 96, 419, 1082, 1189
GsaI	CCCAGC	2 cut(s)	248, 557
HaeII	RGCGCY	1 cut(s)	926
HaeIII	GGCC	2 cut(s)	964, 1136
HapII	CCGG	4 cut(s)	134, 140, 339, 653
HgaI	GACGC	1 cut(s)	297
HhaI	GCGC	2 cut(s)	338, 925
Hin1II	CATG	9 cut(s)	670, 914, 946, 974, 1002, 1010, 1099, 1159, 1272
Hin6I	GCGC	2 cut(s)	336, 923
HinP1I	GCGC	2 cut(s)	336, 923
HindIII	AAGCTT	1 cut(s)	1367
HinfI	GANTC	2 cut(s)	18, 452
HpaII	CCGG	4 cut(s)	134, 140, 339, 653
HphI	GGTGA	1 cut(s)	713
Hpy166II	GTNNAC	2 cut(s)	319, 876
Hpy188I	TCNGA	4 cut(s)	52, 190, 221, 769
Hpy8I	GTNNAC	2 cut(s)	319, 876
Hpy99I	CGWCG	1 cut(s)	874
HpyAV	CCTTC	3 cut(s)	60, 65, 1048
HpyCH4III	ACNGT	3 cut(s)	387, 467, 1018
HpyCH4IV	ACGT	4 cut(s)	213, 321, 525, 680
HpyF10VI	GCNNNNNNNGC	6 cut(s)	575, 595, 608, 692, 939, 1175
HpyF3I	CTNAG	4 cut(s)	632, 992, 1245, 1374
HpySE526I	ACGT	4 cut(s)	213, 321, 525, 680
Hsp92II	CATG	9 cut(s)	670, 914, 946, 974, 1002, 1010, 1099, 1159, 1272
HspAI	GCGC	2 cut(s)	336, 923
Ksp22I	TGATCA	1 cut(s)	3
Kzo9I	GATC	4 cut(s)	3, 408, 532, 1102
LguI	GCTCTTC	1 cut(s)	723
LmnI	GCTCC	3 cut(s)	301, 853, 1199
Lsp1109I	GCAGC	5 cut(s)	62, 82, 430, 1093, 1175
LweI	GCATC	3 cut(s)	283, 891, 1082
MaeI	CTAG	4 cut(s)	149, 174, 603, 1262
MaeII	ACGT	4 cut(s)	213, 321, 525, 680
MaeIII	GTNAC	6 cut(s)	330, 645, 661, 676, 701, 973
MalI	GATC	4 cut(s)	5, 410, 534, 1104
MbiI	CCGCTC	1 cut(s)	1118
MboI	GATC	4 cut(s)	3, 408, 532, 1102
MboII	GAAGA	5 cut(s)	710, 1063, 1097, 1163, 1237
MflI	RGATCY	1 cut(s)	1102
MhlI	GDGCHC	3 cut(s)	450, 697, 993
MluCI	AATT	5 cut(s)	45, 103, 166, 227, 784
MlyI	GAGTC	1 cut(s)	446
MmeI	TCCRAC	1 cut(s)	46
Mph1103I	ATGCAT	1 cut(s)	1097
MroXI	GAANNNNTTC	2 cut(s)	527, 933
MseI	TTAA	1 cut(s)	483
MslI	CAYNNNNRTG	4 cut(s)	732, 909, 915, 1160
MspA1I	CMGCKG	1 cut(s)	95
MspI	CCGG	4 cut(s)	134, 140, 339, 653
MspR9I	CCNGG	5 cut(s)	134, 140, 835, 1138, 1383
Mva1269I	GAATGC	3 cut(s)	520, 571, 935
MvaI	CCWGG	3 cut(s)	835, 1138, 1383
MvnI	CGCG	2 cut(s)	291, 336
MwoI	GCNNNNNNNGC	6 cut(s)	575, 595, 608, 692, 939, 1175
NciI	CCSGG	2 cut(s)	134, 140
NcoI	CCATGG	2 cut(s)	666, 1268
NdeII	GATC	4 cut(s)	3, 408, 532, 1102
NlaIII	CATG	9 cut(s)	670, 914, 946, 974, 1002, 1010, 1099, 1159, 1272
NlaIV	GGNNCC	3 cut(s)	138, 1201, 1380
NmuCI	GTSAC	5 cut(s)	330, 661, 676, 701, 973
NsiI	ATGCAT	1 cut(s)	1097
NspI	RCATGY	3 cut(s)	914, 1002, 1159
PaqCI	CACCTGC	1 cut(s)	1388
PciSI	GCTCTTC	1 cut(s)	723
PcsI	WCGNNNNNNNCGW	1 cut(s)	878
PctI	GAATGC	3 cut(s)	520, 571, 935
PdmI	GAANNNNTTC	2 cut(s)	527, 933
PfeI	GAWTC	1 cut(s)	18
PfoI	TCCNGGA	1 cut(s)	132
PkrI	GCNGC	5 cut(s)	77, 97, 420, 1083, 1190
PleI	GAGTC	1 cut(s)	446
PpsI	GAGTC	1 cut(s)	446
Psp6I	CCWGG	3 cut(s)	833, 1136, 1381
PspFI	CCCAGC	2 cut(s)	244, 553
PspGI	CCWGG	3 cut(s)	833, 1136, 1381
PspN4I	GGNNCC	3 cut(s)	138, 1201, 1380
PspPI	GGNCC	2 cut(s)	136, 876
PstNI	CAGNNNCTG	1 cut(s)	98
PsuI	RGATCY	1 cut(s)	1102
PvuII	CAGCTG	1 cut(s)	95
RsaI	GTAC	2 cut(s)	114, 464
RsaNI	GTAC	2 cut(s)	113, 463
RseI	CAYNNNNRTG	4 cut(s)	732, 909, 915, 1160
SapI	GCTCTTC	1 cut(s)	723
SaqAI	TTAA	1 cut(s)	483
SatI	GCNGC	5 cut(s)	76, 96, 419, 1082, 1189
Sau3AI	GATC	4 cut(s)	3, 408, 532, 1102
Sau96I	GGNCC	2 cut(s)	136, 876
ScaI	AGTACT	1 cut(s)	464
SchI	GAGTC	1 cut(s)	446
ScrFI	CCNGG	5 cut(s)	134, 140, 835, 1138, 1383
SduI	GDGCHC	3 cut(s)	450, 697, 993
SfaNI	GCATC	3 cut(s)	283, 891, 1082
SfcI	CTRYAG	2 cut(s)	13, 612
SgrAI	CRCCGGYG	1 cut(s)	338
SinI	GGWCC	2 cut(s)	136, 876
SmiMI	CAYNNNNRTG	4 cut(s)	732, 909, 915, 1160
SmlI	CTYRAG	1 cut(s)	1127
SmoI	CTYRAG	1 cut(s)	1127
SpeI	ACTAGT	1 cut(s)	173
Sse9I	AATT	5 cut(s)	45, 103, 166, 227, 784
SsiI	CCGC	7 cut(s)	500, 578, 594, 642, 758, 953, 1118
SspMI	CTAG	4 cut(s)	149, 174, 603, 1262
StyD4I	CCNGG	5 cut(s)	132, 138, 833, 1136, 1381
StyI	CCWWGG	3 cut(s)	495, 666, 1268
TaaI	ACNGT	3 cut(s)	387, 467, 1018
TaiI	ACGT	4 cut(s)	216, 324, 528, 683
TaqI	TCGA	4 cut(s)	450, 531, 845, 881
TasI	AATT	5 cut(s)	45, 103, 166, 227, 784
TatI	WGTACW	2 cut(s)	112, 462
TfiI	GAWTC	1 cut(s)	18
Tru1I	TTAA	1 cut(s)	483
Tru9I	TTAA	1 cut(s)	483
TscAI	CASTG	3 cut(s)	263, 390, 1000
TseFI	GTSAC	5 cut(s)	330, 661, 676, 701, 973
TseI	GCWGC	5 cut(s)	75, 95, 418, 1081, 1188
Tsp45I	GTSAC	5 cut(s)	330, 661, 676, 701, 973
TspDTI	ATGAA	4 cut(s)	413, 995, 1064, 1178
TspGWI	ACGGA	2 cut(s)	535, 1363
TspRI	CASTG	3 cut(s)	263, 390, 1000
VpaK11BI	GGWCC	2 cut(s)	136, 876
XapI	RAATTY	3 cut(s)	45, 103, 784
XceI	RCATGY	3 cut(s)	914, 1002, 1159
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1144
XmnI	GAANNNNTTC	2 cut(s)	527, 933
XspI	CTAG	4 cut(s)	149, 174, 603, 1262
ZrmI	AGTACT	1 cut(s)	464
Zsp2I	ATGCAT	1 cut(s)	1097

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.