Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0015111

Physical Location & Seq

Genomic Coordinates Reverse (-)

54173409 .. 54176303

Gene Structure 2895 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0445700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1590 bp

ATGGAAACCGAAACCGAAACCGAAATCAACGGCCCAGATTCCACACAAACCTCCGATCATGATCTCCTCCGCGCCGAGCTCGACTCCCTCCGCCGGTCTCATCGGAGCCTCCTACAGAAGACGGCGGCGATGGAGGAAGACTTCAACCGCGTCCAGAGCCAGCGAGACGAGGCGGCGGCTCGCAACGCCGAGTTGACCAGACTCGTCGGAGAAGTTTCCGGCGAGAGGGACGCTCTAAGGGAAGAGCTTCGCAAGGTCGAAGCTGTGAAGAGAGAGAAGGAAGACGAGTATGCGATGAAAATCGATGAGGAGGTGAGGAGGAAGAAGAGTCTGGAAAGTGAGGTTCGAGTCTGTAAGGAGAGAATTGAGAGGTTGGAGATTGAGAGGAGAGAAAGAGATGAGTTTTTGATCAAGTGCTCGGATTCGCTCCGGCCGATCGAGAAGGAGTTGATCAGGATTATTGAAGGAGTCTGTGACGAAGAAGATGACAAAGAAGTAGTTGAGATTGAGAAGGCGGCAACGAATGTGGGGGGAGGTGAAGCCGAATTGGACCAGGAATCGAGGGGAGTATGGGAGAAGATCAAGACTATCAAGAGGCTAGTGGAGATAGCCGAAGAGAAAGTGGATGATTATAAGGAATTGAGGCATAACGAGAGGAGGCAATTGGGGAACAGTGTGGTGAGTTTGACAGAGGAGAATAGGGATATCAGCACATTGCTGAGGATTGCTTTGGTGGAGAAGGAGGCTGTGGAGAAGAGGTTGAAGGGGAGCGGTGAGACGAAGAGGGTGGCCATTTTGCAGAGAGTTGGATTCAGTCCGTTCGGGTTTTTGATGGGAAGTGGAGGCAATGAGCAGCCATTGGAGGCTTCCGGGGCTAAATTGGAAGGAATGGGGTCTGGTGCGAGTAACATGTCGGATAGCAGTGAGTGTGAAGAGGAGGTTGTAAGTCTGGCATCTACTGTAGAGAAGATAATGAAGAACCTGCGCCTGGAAATCAGTCAATTGAGAAGATCTTTGGACGACTCTAGGTCAGACACTGAGCGCCTACAGAGTCTCACAGAGAAACAAGCTCAACAAATTGCAGAAAACATGCTGTACATCAAGGAGTTAGAAGACAGAGAGAGGGTGTTAACTGAAAATGTTGAGGCACACATGATTGAAATGAAGGATGCTGAAGCAGAGGTTGCCAGATGGAGAGAAGCTTGTGAGTTGGAAGTTGAAGCTGGGAAAAATGAGATTGAAGAACGCGAAAAATTGATTGCCATTCTGAAGAAAGAATTGGAGAAAACAAGGGCTGCTTTGGACATATCAAATGGCAAATTAAAGCTGAAAGAAGAACTTGCAGCTAATGCCATGGCTGCTCATGCAGCAGCAGAGAAGTCCCTCCAGCTGGCTGACAGCAGGGCAGCAGGACTCCGTACCCGAATAGAGGAACTAACAAGACAGCTAGAAGAAGCAGATAGCAGAGAGCGCAATAGCCGAAGGGTGAGGCATATATGTTGGCCATGGCGATCCTTCAAAGTGAACCCTGCTAACAATGTACGACGATTGCTACCAGAAATGCAGGCCTTGCTTAATTATAGTGGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

529

Amino Acids

60.48

Weight (kDa)

5.09

Isoelectric Point (pI)

64.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015111)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77170
fragaria_vesca	FvH4_7g33970
malus_domestica	MD01G1235900.v1.1
prunus_persica	Prupe.2G326000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0384201
rosa_laevigata	RLG00000026060
rosa_multiflora	Rmu_co8317187.1_g000001 Rmu_sc0005139.1_g000005 Rmu_sc0014578.1_g000005
rosa_roxburghii	Rroxscaffold_4G00276860
rosa_rugosa	Rorug01G0445700
rosa_samantha	Rh1AG471200 Rh1BG429000 Rh1CG441600 Rh1DG461700
rosa_wichuraiana	Rw1G040130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	633
Acc36I	ACCTGC	1 cut(s)	990
AccBSI	CCGCTC	1 cut(s)	771
AccII	CGCG	3 cut(s)	72, 150, 1248
AciI	CCGC	8 cut(s)	70, 91, 125, 148, 173, 176, 515, 771
AclWI	GGATC	1 cut(s)	1506
AcoI	YGGCCR	3 cut(s)	431, 789, 1502
AcuI	CTGAAG	2 cut(s)	1194, 1289
AfaI	GTAC	3 cut(s)	1097, 1420, 1542
AfiI	CCNNNNNNNGG	5 cut(s)	93, 225, 988, 1390, 1429
AflIII	ACRYGT	1 cut(s)	909
AgsI	TTSAA	7 cut(s)	145, 464, 763, 1160, 1220, 1241, 1519
AhdI	GACNNNNNGTC	1 cut(s)	1027
AjnI	CCWGG	2 cut(s)	552, 987
AjuI	GAANNNNNNNTTGG	2 cut(s)	1262, 1294
Alw21I	GWGCWC	2 cut(s)	81, 419
Alw26I	GTCTC	4 cut(s)	102, 159, 770, 1058
AlwI	GGATC	1 cut(s)	1506
AlwNI	CAGNNNCTG	1 cut(s)	1037
AoxI	GGCC	5 cut(s)	31, 431, 789, 1502, 1566
ApeKI	GCWGC	7 cut(s)	853, 1295, 1343, 1358, 1367, 1370, 1406
Asp700I	GAANNNNTTC	1 cut(s)	246
AspLEI	GCGC	4 cut(s)	74, 987, 1044, 1473
AspS9I	GGNCC	2 cut(s)	32, 550
AsuC2I	CCSGG	1 cut(s)	871
AsuHPI	GGTGA	5 cut(s)	325, 548, 691, 785, 1498
AvaII	GGWCC	1 cut(s)	550
BalI	TGGCCA	2 cut(s)	791, 1504
BanII	GRGCYC	1 cut(s)	81
BbsI	GAAGAC	4 cut(s)	125, 144, 288, 1119
Bbv12I	GWGCWC	2 cut(s)	81, 419
BbvCI	CCTCAGC	1 cut(s)	719
BbvI	GCAGC	7 cut(s)	865, 1282, 1345, 1355, 1379, 1382, 1418
BccI	CCATC	3 cut(s)	124, 826, 1185
BceAI	ACGGC	2 cut(s)	46, 138
BciT130I	CCWGG	2 cut(s)	554, 989
BclI	TGATCA	2 cut(s)	408, 450
BcnI	CCSGG	1 cut(s)	871
BcoDI	GTCTC	4 cut(s)	102, 159, 770, 1058
BfaI	CTAG	3 cut(s)	599, 1026, 1448
BfmI	CTRYAG	3 cut(s)	113, 960, 1046
BfoI	RGCGCY	1 cut(s)	1045
BfuAI	ACCTGC	1 cut(s)	990
BglII	AGATCT	1 cut(s)	1010
Bme1390I	CCNGG	3 cut(s)	554, 871, 989
Bme18I	GGWCC	1 cut(s)	550
BmeRI	GACNNNNNGTC	1 cut(s)	1027
BmgT120I	GGNCC	2 cut(s)	32, 550
BmiI	GGNNCC	1 cut(s)	107
BmrFI	CCNGG	3 cut(s)	554, 871, 989
BmsI	GCATC	2 cut(s)	962, 1159
BpiI	GAAGAC	4 cut(s)	125, 144, 288, 1119
BplI	GAGNNNNNCTC	4 cut(s)	68, 100, 217, 249
BpmI	CTGGAG	1 cut(s)	1370
Bpu10I	CCTNAGC	1 cut(s)	719
BpuMI	CCSGG	1 cut(s)	871
Bsa29I	ATCGAT	1 cut(s)	303
BsaBI	GATNNNNATC	2 cut(s)	60, 299
BsaI	GGTCTC	1 cut(s)	102
BsaJI	CCNNGG	3 cut(s)	870, 1353, 1505
BsaXI	ACNNNNNCTCC	2 cut(s)	743, 773
Bsc4I	CCNNNNNNNGG	5 cut(s)	93, 225, 988, 1390, 1429
Bse118I	RCCGGY	1 cut(s)	93
Bse3DI	GCAATG	2 cut(s)	713, 853
Bse8I	GATNNNNATC	2 cut(s)	60, 299
BseBI	CCWGG	2 cut(s)	554, 989
BseCI	ATCGAT	1 cut(s)	303
BseDI	CCNNGG	3 cut(s)	870, 1353, 1505
BseGI	GGATG	2 cut(s)	631, 1174
BseJI	GATNNNNATC	2 cut(s)	60, 299
BseLI	CCNNNNNNNGG	5 cut(s)	93, 225, 988, 1390, 1429
BseMI	GCAATG	2 cut(s)	713, 853
BseMII	CTCAG	2 cut(s)	710, 1029
BseRI	GAGGAG	7 cut(s)	56, 323, 331, 400, 670, 707, 950
BseX3I	CGGCCG	1 cut(s)	431
BseXI	GCAGC	7 cut(s)	865, 1282, 1345, 1355, 1379, 1382, 1418
BseYI	CCCAGC	1 cut(s)	1223
Bsh1236I	CGCG	3 cut(s)	72, 150, 1248
Bsh1285I	CGRYCG	2 cut(s)	434, 438
BshFI	GGCC	5 cut(s)	33, 433, 791, 1504, 1568
BshVI	ATCGAT	1 cut(s)	303
BsiEI	CGRYCG	2 cut(s)	434, 438
BsiHKAI	GWGCWC	2 cut(s)	81, 419
BsiSI	CCGG	4 cut(s)	94, 219, 430, 870
BslFI	GGGAC	2 cut(s)	242, 1366
BslI	CCNNNNNNNGG	5 cut(s)	93, 225, 988, 1390, 1429
BsmAI	GTCTC	4 cut(s)	102, 159, 770, 1058
BsmBI	CGTCTC	2 cut(s)	159, 770
BsmFI	GGGAC	2 cut(s)	242, 1366
BsnI	GGCC	5 cut(s)	33, 433, 791, 1504, 1568
Bso31I	GGTCTC	1 cut(s)	102
Bsp1286I	GDGCHC	2 cut(s)	81, 419
Bsp1407I	TGTACA	1 cut(s)	1095
Bsp143I	GATC	8 cut(s)	55, 61, 408, 435, 450, 579, 1010, 1511
Bsp19I	CCATGG	2 cut(s)	1353, 1505
BspACI	CCGC	8 cut(s)	70, 91, 125, 148, 173, 176, 515, 771
BspANI	GGCC	5 cut(s)	33, 433, 791, 1504, 1568
BspCNI	CTCAG	2 cut(s)	711, 1030
BspDI	ATCGAT	1 cut(s)	303
BspFNI	CGCG	3 cut(s)	72, 150, 1248
BspHI	TCATGA	1 cut(s)	58
BspLI	GGNNCC	1 cut(s)	107
BspMI	ACCTGC	1 cut(s)	990
BspPI	GGATC	1 cut(s)	1506
BspQI	GCTCTTC	1 cut(s)	237
BspTNI	GGTCTC	1 cut(s)	102
BsrBI	CCGCTC	1 cut(s)	771
BsrDI	GCAATG	2 cut(s)	713, 853
BsrFI	RCCGGY	1 cut(s)	93
BsrGI	TGTACA	1 cut(s)	1095
BssAI	RCCGGY	1 cut(s)	93
BssECI	CCNNGG	3 cut(s)	870, 1353, 1505
BssMI	GATC	8 cut(s)	55, 61, 408, 435, 450, 579, 1010, 1511
BssT1I	CCWWGG	2 cut(s)	1353, 1505
Bst2UI	CCWGG	2 cut(s)	554, 989
Bst4CI	ACNGT	2 cut(s)	674, 961
Bst6I	CTCTTC	7 cut(s)	237, 263, 320, 609, 749, 776, 927
BstAPI	GCANNNNNTGC	3 cut(s)	1184, 1349, 1570
BstAUI	TGTACA	1 cut(s)	1095
BstC8I	GCNNGC	4 cut(s)	161, 181, 1392, 1566
BstDEI	CTNAG	3 cut(s)	236, 719, 1038
BstDSI	CCRYGG	2 cut(s)	1353, 1505
BstF5I	GGATG	2 cut(s)	631, 1174
BstFNI	CGCG	3 cut(s)	72, 150, 1248
BstH2I	RGCGCY	1 cut(s)	1045
BstHHI	GCGC	4 cut(s)	74, 987, 1044, 1473
BstKTI	GATC	8 cut(s)	58, 64, 411, 438, 453, 582, 1013, 1514
BstMAI	GTCTC	4 cut(s)	102, 159, 770, 1058
BstMBI	GATC	8 cut(s)	55, 61, 408, 435, 450, 579, 1010, 1511
BstMCI	CGRYCG	2 cut(s)	434, 438
BstNI	CCWGG	2 cut(s)	554, 989
BstNSI	RCATGY	2 cut(s)	913, 1093
BstSCI	CCNGG	3 cut(s)	552, 869, 987
BstSFI	CTRYAG	3 cut(s)	113, 960, 1046
BstUI	CGCG	3 cut(s)	72, 150, 1248
BstV1I	GCAGC	7 cut(s)	865, 1282, 1345, 1355, 1379, 1382, 1418
BstV2I	GAAGAC	4 cut(s)	125, 144, 288, 1119
BstX2I	RGATCY	1 cut(s)	1010
BstYI	RGATCY	1 cut(s)	1010
BstZI	CGGCCG	1 cut(s)	431
Bsu15I	ATCGAT	1 cut(s)	303
BsuRI	GGCC	5 cut(s)	33, 433, 791, 1504, 1568
BsuTUI	ATCGAT	1 cut(s)	303
BtgI	CCRYGG	2 cut(s)	1353, 1505
BtgZI	GCGATG	2 cut(s)	143, 308
BtsCI	GGATG	2 cut(s)	631, 1174
BtsI	GCAGTG	1 cut(s)	928
BtsIMutI	CAGTG	3 cut(s)	679, 928, 1035
BveI	ACCTGC	1 cut(s)	990
Cac8I	GCNNGC	4 cut(s)	161, 181, 1392, 1566
CaiI	CAGNNNCTG	1 cut(s)	1037
CciI	TCATGA	1 cut(s)	58
CfoI	GCGC	4 cut(s)	74, 987, 1044, 1473
Cfr10I	RCCGGY	1 cut(s)	93
Cfr13I	GGNCC	2 cut(s)	32, 550
ClaI	ATCGAT	1 cut(s)	303
CseI	GACGC	2 cut(s)	139, 239
Csp6I	GTAC	3 cut(s)	1096, 1419, 1541
CspCI	CAANNNNNGTGG	2 cut(s)	507, 542
CviAII	CATG	7 cut(s)	59, 910, 1090, 1153, 1354, 1364, 1506
CviQI	GTAC	3 cut(s)	1096, 1419, 1541
DdeI	CTNAG	3 cut(s)	236, 719, 1038
DpnI	GATC	8 cut(s)	57, 63, 410, 437, 452, 581, 1012, 1513
DpnII	GATC	8 cut(s)	55, 61, 408, 435, 450, 579, 1010, 1511
DriI	GACNNNNNGTC	1 cut(s)	1027
EaeI	YGGCCR	3 cut(s)	431, 789, 1502
EagI	CGGCCG	1 cut(s)	431
Eam1104I	CTCTTC	7 cut(s)	237, 263, 320, 609, 749, 776, 927
Eam1105I	GACNNNNNGTC	1 cut(s)	1027
EarI	CTCTTC	7 cut(s)	237, 263, 320, 609, 749, 776, 927
EciI	GGCGGA	1 cut(s)	80
Ecl136II	GAGCTC	1 cut(s)	79
EclXI	CGGCCG	1 cut(s)	431
Eco130I	CCWWGG	2 cut(s)	1353, 1505
Eco147I	AGGCCT	1 cut(s)	1568
Eco24I	GRGCYC	1 cut(s)	81
Eco31I	GGTCTC	1 cut(s)	102
Eco32I	GATATC	1 cut(s)	706
Eco47I	GGWCC	1 cut(s)	550
Eco52I	CGGCCG	1 cut(s)	431
Eco53kI	GAGCTC	1 cut(s)	79
Eco57I	CTGAAG	2 cut(s)	1194, 1289
EcoICRI	GAGCTC	1 cut(s)	79
EcoRII	CCWGG	2 cut(s)	552, 987
EcoRV	GATATC	1 cut(s)	706
EcoT14I	CCWWGG	2 cut(s)	1353, 1505
EcoT38I	GRGCYC	1 cut(s)	81
ErhI	CCWWGG	2 cut(s)	1353, 1505
Esp3I	CGTCTC	2 cut(s)	159, 770
FaeI	CATG	7 cut(s)	62, 913, 1093, 1156, 1357, 1367, 1509
FalI	AAGNNNNNCTT	4 cut(s)	1282, 1314, 1323, 1355
FaqI	GGGAC	2 cut(s)	242, 1366
FatI	CATG	7 cut(s)	58, 909, 1089, 1152, 1353, 1363, 1505
FbaI	TGATCA	2 cut(s)	408, 450
FokI	GGATG	2 cut(s)	638, 1181
FriOI	GRGCYC	1 cut(s)	81
FspBI	CTAG	3 cut(s)	599, 1026, 1448
GlaI	GCGC	4 cut(s)	73, 986, 1043, 1472
GsaI	CCCAGC	1 cut(s)	1227
GsuI	CTGGAG	1 cut(s)	1370
HaeII	RGCGCY	1 cut(s)	1045
HaeIII	GGCC	5 cut(s)	33, 433, 791, 1504, 1568
HapII	CCGG	4 cut(s)	94, 219, 430, 870
HgaI	GACGC	2 cut(s)	139, 239
HhaI	GCGC	4 cut(s)	74, 987, 1044, 1473
Hin1II	CATG	7 cut(s)	62, 913, 1093, 1156, 1357, 1367, 1509
Hin6I	GCGC	4 cut(s)	72, 985, 1042, 1471
HinP1I	GCGC	4 cut(s)	72, 985, 1042, 1471
HincII	GTYRAC	2 cut(s)	195, 1131
HindII	GTYRAC	2 cut(s)	195, 1131
HindIII	AAGCTT	1 cut(s)	1200
HpaI	GTTAAC	1 cut(s)	1131
HpaII	CCGG	4 cut(s)	94, 219, 430, 870
HphI	GGTGA	5 cut(s)	325, 548, 691, 785, 1498
Hpy166II	GTNNAC	3 cut(s)	195, 1131, 1525
Hpy188I	TCNGA	7 cut(s)	55, 105, 209, 421, 916, 1033, 1269
Hpy188III	TCNNGA	7 cut(s)	59, 154, 332, 439, 454, 583, 592
Hpy8I	GTNNAC	3 cut(s)	195, 1131, 1525
Hpy99I	CGWCG	2 cut(s)	209, 1548
HpyCH4III	ACNGT	2 cut(s)	674, 961
HpyCH4V	TGCA	5 cut(s)	799, 1082, 1343, 1367, 1564
HpyF3I	CTNAG	3 cut(s)	236, 719, 1038
Hsp92II	CATG	7 cut(s)	62, 913, 1093, 1156, 1357, 1367, 1509
HspAI	GCGC	4 cut(s)	72, 985, 1042, 1471
Ksp22I	TGATCA	2 cut(s)	408, 450
KspAI	GTTAAC	1 cut(s)	1131
Kzo9I	GATC	8 cut(s)	55, 61, 408, 435, 450, 579, 1010, 1511
LguI	GCTCTTC	1 cut(s)	237
LmnI	GCTCC	3 cut(s)	105, 432, 768
Lsp1109I	GCAGC	7 cut(s)	865, 1282, 1345, 1355, 1379, 1382, 1418
LweI	GCATC	2 cut(s)	962, 1159
MaeI	CTAG	3 cut(s)	599, 1026, 1448
MaeIII	GTNAC	2 cut(s)	473, 905
MalI	GATC	8 cut(s)	57, 63, 410, 437, 452, 581, 1012, 1513
MbiI	CCGCTC	1 cut(s)	771
MboI	GATC	8 cut(s)	55, 61, 408, 435, 450, 579, 1010, 1511
MfeI	CAATTG	2 cut(s)	662, 1001
MflI	RGATCY	1 cut(s)	1010
MhlI	GDGCHC	2 cut(s)	81, 419
MlsI	TGGCCA	2 cut(s)	791, 1504
MluNI	TGGCCA	2 cut(s)	791, 1504
MlyI	GAGTC	8 cut(s)	77, 195, 337, 357, 477, 1016, 1060, 1407
MmeI	TCCRAC	5 cut(s)	187, 354, 787, 894, 1191
Mox20I	TGGCCA	2 cut(s)	791, 1504
MroXI	GAANNNNTTC	1 cut(s)	246
MscI	TGGCCA	2 cut(s)	791, 1504
MseI	TTAA	3 cut(s)	1130, 1322, 1575
Msp20I	TGGCCA	2 cut(s)	791, 1504
MspA1I	CMGCKG	1 cut(s)	1390
MspI	CCGG	4 cut(s)	94, 219, 430, 870
MspR9I	CCNGG	3 cut(s)	554, 871, 989
MunI	CAATTG	2 cut(s)	662, 1001
MvaI	CCWGG	2 cut(s)	554, 989
MvnI	CGCG	3 cut(s)	72, 150, 1248
NciI	CCSGG	1 cut(s)	871
NcoI	CCATGG	2 cut(s)	1353, 1505
NdeII	GATC	8 cut(s)	55, 61, 408, 435, 450, 579, 1010, 1511
NlaIII	CATG	7 cut(s)	62, 913, 1093, 1156, 1357, 1367, 1509
NlaIV	GGNNCC	1 cut(s)	107
NmeAIII	GCCGAG	2 cut(s)	100, 214
NmuCI	GTSAC	1 cut(s)	473
NspI	RCATGY	2 cut(s)	913, 1093
PagI	TCATGA	1 cut(s)	58
PceI	AGGCCT	1 cut(s)	1568
PciI	ACATGT	1 cut(s)	909
PciSI	GCTCTTC	1 cut(s)	237
PcsI	WCGNNNNNNNCGW	1 cut(s)	431
PdmI	GAANNNNTTC	1 cut(s)	246
PfeI	GAWTC	4 cut(s)	38, 422, 557, 810
Ple19I	CGATCG	1 cut(s)	438
PleI	GAGTC	8 cut(s)	77, 195, 336, 356, 476, 1016, 1059, 1407
PpsI	GAGTC	8 cut(s)	77, 195, 336, 356, 476, 1016, 1059, 1407
PscI	ACATGT	1 cut(s)	909
PsiI	TTATAA	1 cut(s)	633
Psp124BI	GAGCTC	1 cut(s)	81
Psp6I	CCWGG	2 cut(s)	552, 987
PspFI	CCCAGC	1 cut(s)	1223
PspGI	CCWGG	2 cut(s)	552, 987
PspN4I	GGNNCC	1 cut(s)	107
PspPI	GGNCC	2 cut(s)	32, 550
PstNI	CAGNNNCTG	1 cut(s)	1037
PsuI	RGATCY	1 cut(s)	1010
PvuI	CGATCG	1 cut(s)	438
PvuII	CAGCTG	1 cut(s)	1390
RsaI	GTAC	3 cut(s)	1097, 1420, 1542
RsaNI	GTAC	3 cut(s)	1096, 1419, 1541
SacI	GAGCTC	1 cut(s)	81
SapI	GCTCTTC	1 cut(s)	237
SaqAI	TTAA	3 cut(s)	1130, 1322, 1575
Sau3AI	GATC	8 cut(s)	55, 61, 408, 435, 450, 579, 1010, 1511
Sau96I	GGNCC	2 cut(s)	32, 550
SchI	GAGTC	8 cut(s)	77, 195, 337, 357, 477, 1016, 1060, 1407
ScrFI	CCNGG	3 cut(s)	554, 871, 989
SduI	GDGCHC	2 cut(s)	81, 419
SfaNI	GCATC	2 cut(s)	962, 1159
SfcI	CTRYAG	3 cut(s)	113, 960, 1046
SinI	GGWCC	1 cut(s)	550
SseBI	AGGCCT	1 cut(s)	1568
SsiI	CCGC	8 cut(s)	70, 91, 125, 148, 173, 176, 515, 771
SspMI	CTAG	3 cut(s)	599, 1026, 1448
SstI	GAGCTC	1 cut(s)	81
StuI	AGGCCT	1 cut(s)	1568
StyD4I	CCNGG	3 cut(s)	552, 869, 987
StyI	CCWWGG	2 cut(s)	1353, 1505
TaaI	ACNGT	2 cut(s)	674, 961
TaqI	TCGA	6 cut(s)	81, 258, 303, 346, 438, 560
TatI	WGTACW	1 cut(s)	1095
TauI	GCSGC	4 cut(s)	128, 176, 179, 518
TfiI	GAWTC	4 cut(s)	38, 422, 557, 810
Tru1I	TTAA	3 cut(s)	1130, 1322, 1575
Tru9I	TTAA	3 cut(s)	1130, 1322, 1575
TscAI	CASTG	3 cut(s)	679, 928, 1042
TseFI	GTSAC	1 cut(s)	473
TseI	GCWGC	7 cut(s)	853, 1295, 1343, 1358, 1367, 1370, 1406
Tsp45I	GTSAC	1 cut(s)	473
TspDTI	ATGAA	3 cut(s)	311, 989, 1178
TspGWI	ACGGA	2 cut(s)	807, 1406
TspRI	CASTG	3 cut(s)	679, 928, 1042
VpaK11BI	GGWCC	1 cut(s)	550
XceI	RCATGY	2 cut(s)	913, 1093
XmnI	GAANNNNTTC	1 cut(s)	246
XspI	CTAG	3 cut(s)	599, 1026, 1448

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.