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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g26100 FvH4_7g24971 |
| rosa_laevigata | RLG00000027002 |
| rosa_multiflora | Rmu_ssc0000248.1_g000009 |
| rosa_roxburghii | Rroxscaffold_4G00286160 Rroxscaffold_7G00173300 |
| rosa_rugosa | Rorug01G0360100 |
| rosa_samantha | Rh1AG369800 Rh1BG333400 Rh1CG346800 Rh1DG364600 Rh6AG357500 Rh6BG364400 Rh6CG371500 Rh6DG358300 |
| rosa_wichuraiana | Rw6G031170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 120 |
| AciI | CCGC | 1 cut(s) | 118 |
| AcsI | RAATTY | 1 cut(s) | 230 |
| AfaI | GTAC | 1 cut(s) | 416 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 16 |
| AflII | CTTAAG | 1 cut(s) | 44 |
| AflIII | ACRYGT | 1 cut(s) | 462 |
| AgsI | TTSAA | 4 cut(s) | 56, 221, 263, 469 |
| AjiI | CACGTC | 1 cut(s) | 269 |
| AluBI | AGCT | 7 cut(s) | 22, 43, 82, 103, 155, 217, 450 |
| AluI | AGCT | 7 cut(s) | 22, 43, 82, 103, 155, 217, 450 |
| Alw26I | GTCTC | 1 cut(s) | 155 |
| ApeKI | GCWGC | 3 cut(s) | 149, 152, 155 |
| ApoI | RAATTY | 1 cut(s) | 230 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 476 |
| AspLEI | GCGC | 1 cut(s) | 122 |
| AspS9I | GGNCC | 1 cut(s) | 115 |
| AsuHPI | GGTGA | 1 cut(s) | 300 |
| AvaII | GGWCC | 1 cut(s) | 115 |
| BbvI | GCAGC | 3 cut(s) | 136, 142, 164 |
| BccI | CCATC | 1 cut(s) | 18 |
| BceAI | ACGGC | 1 cut(s) | 460 |
| BcoDI | GTCTC | 1 cut(s) | 155 |
| BfaI | CTAG | 1 cut(s) | 344 |
| BfmI | CTRYAG | 3 cut(s) | 150, 156, 327 |
| BfrI | CTTAAG | 1 cut(s) | 44 |
| BisI | GCNGC | 3 cut(s) | 150, 153, 156 |
| BlsI | GCNGC | 3 cut(s) | 151, 154, 157 |
| Bme18I | GGWCC | 1 cut(s) | 115 |
| BmgBI | CACGTC | 1 cut(s) | 269 |
| BmgT120I | GGNCC | 1 cut(s) | 115 |
| BpuEI | CTTGAG | 2 cut(s) | 104, 125 |
| BsaI | GGTCTC | 1 cut(s) | 155 |
| BsaJI | CCNNGG | 1 cut(s) | 432 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 439, 469 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 16 |
| BseDI | CCNNGG | 1 cut(s) | 432 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 16 |
| BseXI | GCAGC | 3 cut(s) | 136, 142, 164 |
| Bsh1236I | CGCG | 1 cut(s) | 120 |
| BslFI | GGGAC | 1 cut(s) | 325 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 16 |
| BsmAI | GTCTC | 1 cut(s) | 155 |
| BsmFI | GGGAC | 1 cut(s) | 325 |
| Bso31I | GGTCTC | 1 cut(s) | 155 |
| Bsp143I | GATC | 1 cut(s) | 396 |
| BspACI | CCGC | 1 cut(s) | 118 |
| BspFNI | CGCG | 1 cut(s) | 120 |
| BspMAI | CTGCAG | 3 cut(s) | 154, 160, 331 |
| BspTI | CTTAAG | 1 cut(s) | 44 |
| BspTNI | GGTCTC | 1 cut(s) | 155 |
| BssECI | CCNNGG | 1 cut(s) | 432 |
| BssMI | GATC | 1 cut(s) | 396 |
| BssT1I | CCWWGG | 1 cut(s) | 432 |
| Bst6I | CTCTTC | 1 cut(s) | 60 |
| BstAFI | CTTAAG | 1 cut(s) | 44 |
| BstFNI | CGCG | 1 cut(s) | 120 |
| BstHHI | GCGC | 1 cut(s) | 122 |
| BstKTI | GATC | 1 cut(s) | 399 |
| BstMAI | GTCTC | 1 cut(s) | 155 |
| BstMBI | GATC | 1 cut(s) | 396 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 155 |
| BstNSI | RCATGY | 3 cut(s) | 149, 421, 466 |
| BstSFI | CTRYAG | 3 cut(s) | 150, 156, 327 |
| BstUI | CGCG | 1 cut(s) | 120 |
| BstV1I | GCAGC | 3 cut(s) | 136, 142, 164 |
| BtrI | CACGTC | 1 cut(s) | 269 |
| BtsI | GCAGTG | 1 cut(s) | 336 |
| BtsIMutI | CAGTG | 1 cut(s) | 336 |
| CfoI | GCGC | 1 cut(s) | 122 |
| Cfr13I | GGNCC | 1 cut(s) | 115 |
| Csp6I | GTAC | 1 cut(s) | 415 |
| CviAII | CATG | 5 cut(s) | 146, 355, 392, 418, 463 |
| CviQI | GTAC | 1 cut(s) | 415 |
| DpnI | GATC | 1 cut(s) | 398 |
| DpnII | GATC | 1 cut(s) | 396 |
| Eam1104I | CTCTTC | 1 cut(s) | 60 |
| EarI | CTCTTC | 1 cut(s) | 60 |
| Eco130I | CCWWGG | 1 cut(s) | 432 |
| Eco31I | GGTCTC | 1 cut(s) | 155 |
| Eco47I | GGWCC | 1 cut(s) | 115 |
| EcoRI | GAATTC | 1 cut(s) | 230 |
| EcoT14I | CCWWGG | 1 cut(s) | 432 |
| ErhI | CCWWGG | 1 cut(s) | 432 |
| FaeI | CATG | 5 cut(s) | 149, 358, 395, 421, 466 |
| FaqI | GGGAC | 1 cut(s) | 325 |
| FatI | CATG | 5 cut(s) | 145, 354, 391, 417, 462 |
| Fnu4HI | GCNGC | 3 cut(s) | 150, 153, 156 |
| Fsp4HI | GCNGC | 3 cut(s) | 150, 153, 156 |
| FspBI | CTAG | 1 cut(s) | 344 |
| GlaI | GCGC | 1 cut(s) | 121 |
| GluI | GCNGC | 3 cut(s) | 150, 153, 156 |
| HhaI | GCGC | 1 cut(s) | 122 |
| Hin1II | CATG | 5 cut(s) | 149, 358, 395, 421, 466 |
| Hin6I | GCGC | 1 cut(s) | 120 |
| HinP1I | GCGC | 1 cut(s) | 120 |
| HindIII | AAGCTT | 2 cut(s) | 80, 215 |
| HinfI | GANTC | 1 cut(s) | 305 |
| HphI | GGTGA | 1 cut(s) | 300 |
| Hpy166II | GTNNAC | 1 cut(s) | 334 |
| Hpy188I | TCNGA | 2 cut(s) | 78, 249 |
| Hpy188III | TCNNGA | 1 cut(s) | 484 |
| Hpy8I | GTNNAC | 1 cut(s) | 334 |
| HpyAV | CCTTC | 3 cut(s) | 106, 163, 257 |
| HpyCH4IV | ACGT | 1 cut(s) | 268 |
| HpyCH4V | TGCA | 5 cut(s) | 152, 158, 329, 421, 504 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 155 |
| HpySE526I | ACGT | 1 cut(s) | 268 |
| Hsp92II | CATG | 5 cut(s) | 149, 358, 395, 421, 466 |
| HspAI | GCGC | 1 cut(s) | 120 |
| Kzo9I | GATC | 1 cut(s) | 396 |
| LmnI | GCTCC | 3 cut(s) | 19, 190, 447 |
| LpnPI | CCDG | 1 cut(s) | 303 |
| Lsp1109I | GCAGC | 3 cut(s) | 136, 142, 164 |
| MaeI | CTAG | 1 cut(s) | 344 |
| MaeII | ACGT | 1 cut(s) | 268 |
| MaeIII | GTNAC | 1 cut(s) | 518 |
| MalI | GATC | 1 cut(s) | 398 |
| MboI | GATC | 1 cut(s) | 396 |
| MboII | GAAGA | 6 cut(s) | 68, 77, 106, 121, 481, 502 |
| MluCI | AATT | 6 cut(s) | 59, 222, 230, 374, 440, 541 |
| MnlI | CCTC | 2 cut(s) | 274, 372 |
| MroXI | GAANNNNTTC | 1 cut(s) | 476 |
| MseI | TTAA | 4 cut(s) | 45, 411, 426, 533 |
| MslI | CAYNNNNRTG | 2 cut(s) | 359, 485 |
| MspA1I | CMGCKG | 1 cut(s) | 155 |
| MspCI | CTTAAG | 1 cut(s) | 44 |
| MvnI | CGCG | 1 cut(s) | 120 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 155 |
| NdeII | GATC | 1 cut(s) | 396 |
| NlaIII | CATG | 5 cut(s) | 149, 358, 395, 421, 466 |
| NmuCI | GTSAC | 1 cut(s) | 518 |
| NspI | RCATGY | 3 cut(s) | 149, 421, 466 |
| PciI | ACATGT | 1 cut(s) | 462 |
| PdmI | GAANNNNTTC | 1 cut(s) | 476 |
| PfeI | GAWTC | 1 cut(s) | 305 |
| PkrI | GCNGC | 3 cut(s) | 151, 154, 157 |
| PscI | ACATGT | 1 cut(s) | 462 |
| PspPI | GGNCC | 1 cut(s) | 115 |
| PstI | CTGCAG | 3 cut(s) | 154, 160, 331 |
| PvuII | CAGCTG | 1 cut(s) | 155 |
| RsaI | GTAC | 1 cut(s) | 416 |
| RsaNI | GTAC | 1 cut(s) | 415 |
| RseI | CAYNNNNRTG | 2 cut(s) | 359, 485 |
| SaqAI | TTAA | 4 cut(s) | 45, 411, 426, 533 |
| SatI | GCNGC | 3 cut(s) | 150, 153, 156 |
| Sau3AI | GATC | 1 cut(s) | 396 |
| Sau96I | GGNCC | 1 cut(s) | 115 |
| SfcI | CTRYAG | 3 cut(s) | 150, 156, 327 |
| SinI | GGWCC | 1 cut(s) | 115 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 359, 485 |
| SmlI | CTYRAG | 3 cut(s) | 44, 83, 104 |
| SmoI | CTYRAG | 3 cut(s) | 44, 83, 104 |
| Sse9I | AATT | 6 cut(s) | 59, 222, 230, 374, 440, 541 |
| SsiI | CCGC | 1 cut(s) | 118 |
| SspMI | CTAG | 1 cut(s) | 344 |
| StyI | CCWWGG | 1 cut(s) | 432 |
| TaiI | ACGT | 1 cut(s) | 271 |
| TaqI | TCGA | 2 cut(s) | 210, 485 |
| TasI | AATT | 6 cut(s) | 59, 222, 230, 374, 440, 541 |
| TatI | WGTACW | 1 cut(s) | 414 |
| TfiI | GAWTC | 1 cut(s) | 305 |
| Tru1I | TTAA | 4 cut(s) | 45, 411, 426, 533 |
| Tru9I | TTAA | 4 cut(s) | 45, 411, 426, 533 |
| TscAI | CASTG | 1 cut(s) | 336 |
| TseFI | GTSAC | 1 cut(s) | 518 |
| TseI | GCWGC | 3 cut(s) | 149, 152, 155 |
| Tsp45I | GTSAC | 1 cut(s) | 518 |
| TspDTI | ATGAA | 6 cut(s) | 243, 318, 377, 387, 469, 503 |
| TspRI | CASTG | 1 cut(s) | 336 |
| Vha464I | CTTAAG | 1 cut(s) | 44 |
| VpaK11BI | GGWCC | 1 cut(s) | 115 |
| XapI | RAATTY | 1 cut(s) | 230 |
| XceI | RCATGY | 3 cut(s) | 149, 421, 466 |
| XmnI | GAANNNNTTC | 1 cut(s) | 476 |
| XspI | CTAG | 1 cut(s) | 344 |