Belongs to the SNF7 family
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g26100 FvH4_7g24971 |
| rosa_laevigata | RLG00000027002 |
| rosa_multiflora | Rmu_ssc0000248.1_g000009 |
| rosa_roxburghii | Rroxscaffold_4G00286160 Rroxscaffold_7G00173300 |
| rosa_rugosa | Rorug01G0360100 |
| rosa_samantha | Rh1AG369800 Rh1BG333400 Rh1CG346800 Rh1DG364600 Rh6AG357500 Rh6BG364400 Rh6CG371500 Rh6DG358300 |
| rosa_wichuraiana | Rw6G031170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 257 |
| AciI | CCGC | 1 cut(s) | 644 |
| AclWI | GGATC | 2 cut(s) | 609, 622 |
| AcsI | RAATTY | 1 cut(s) | 259 |
| AcuI | CTGAAG | 1 cut(s) | 62 |
| AfaI | GTAC | 1 cut(s) | 214 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 587 |
| AflIII | ACRYGT | 1 cut(s) | 198 |
| AgsI | TTSAA | 6 cut(s) | 443, 457, 499, 516, 545, 604 |
| AjnI | CCWGG | 1 cut(s) | 580 |
| AluBI | AGCT | 4 cut(s) | 97, 149, 253, 267 |
| AluI | AGCT | 4 cut(s) | 97, 149, 253, 267 |
| Alw26I | GTCTC | 1 cut(s) | 56 |
| AlwI | GGATC | 2 cut(s) | 609, 622 |
| ApoI | RAATTY | 1 cut(s) | 259 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 341, 373 |
| AseI | ATTAAT | 1 cut(s) | 177 |
| AsuHPI | GGTGA | 2 cut(s) | 333, 560 |
| BamHI | GGATCC | 1 cut(s) | 614 |
| BccI | CCATC | 1 cut(s) | 605 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 341, 375 |
| BciT130I | CCWGG | 1 cut(s) | 582 |
| BcoDI | GTCTC | 1 cut(s) | 56 |
| BfmI | CTRYAG | 1 cut(s) | 150 |
| Bme1390I | CCNGG | 1 cut(s) | 582 |
| BmiI | GGNNCC | 1 cut(s) | 616 |
| BmrFI | CCNGG | 1 cut(s) | 582 |
| BpuEI | CTTGAG | 1 cut(s) | 119 |
| BsaAI | YACGTR | 1 cut(s) | 199 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 469, 499 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 587 |
| Bse1I | ACTGG | 1 cut(s) | 300 |
| Bse3DI | GCAATG | 2 cut(s) | 369, 592 |
| BseBI | CCWGG | 1 cut(s) | 582 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 587 |
| BseMI | GCAATG | 2 cut(s) | 369, 592 |
| BseMII | CTCAG | 2 cut(s) | 159, 477 |
| BseNI | ACTGG | 1 cut(s) | 300 |
| BslFI | GGGAC | 1 cut(s) | 240 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 587 |
| BsmAI | GTCTC | 1 cut(s) | 56 |
| BsmFI | GGGAC | 1 cut(s) | 240 |
| Bsp1407I | TGTACA | 1 cut(s) | 212 |
| Bsp143I | GATC | 2 cut(s) | 426, 614 |
| BspACI | CCGC | 1 cut(s) | 644 |
| BspCNI | CTCAG | 2 cut(s) | 158, 476 |
| BspLI | GGNNCC | 1 cut(s) | 616 |
| BspPI | GGATC | 2 cut(s) | 609, 622 |
| BsrDI | GCAATG | 2 cut(s) | 369, 592 |
| BsrGI | TGTACA | 1 cut(s) | 212 |
| BsrI | ACTGG | 1 cut(s) | 300 |
| BssMI | GATC | 2 cut(s) | 426, 614 |
| Bst2UI | CCWGG | 1 cut(s) | 582 |
| Bst4CI | ACNGT | 1 cut(s) | 13 |
| Bst6I | CTCTTC | 1 cut(s) | 348 |
| BstAUI | TGTACA | 1 cut(s) | 212 |
| BstBAI | YACGTR | 1 cut(s) | 199 |
| BstC8I | GCNNGC | 1 cut(s) | 74 |
| BstDEI | CTNAG | 3 cut(s) | 145, 372, 463 |
| BstKTI | GATC | 2 cut(s) | 429, 617 |
| BstMAI | GTCTC | 1 cut(s) | 56 |
| BstMBI | GATC | 2 cut(s) | 426, 614 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 487 |
| BstNI | CCWGG | 1 cut(s) | 582 |
| BstNSI | RCATGY | 2 cut(s) | 308, 451 |
| BstSCI | CCNGG | 1 cut(s) | 580 |
| BstSFI | CTRYAG | 1 cut(s) | 150 |
| BstX2I | RGATCY | 1 cut(s) | 614 |
| BstYI | RGATCY | 1 cut(s) | 614 |
| Cac8I | GCNNGC | 1 cut(s) | 74 |
| CseI | GACGC | 1 cut(s) | 237 |
| Csp6I | GTAC | 1 cut(s) | 213 |
| CviAII | CATG | 4 cut(s) | 305, 379, 448, 570 |
| CviJI | RGCY | 9 cut(s) | 38, 76, 97, 131, 149, 167, 253, 267, 580 |
| CviKI_1 | RGCY | 9 cut(s) | 38, 76, 97, 131, 149, 167, 253, 267, 580 |
| CviQI | GTAC | 1 cut(s) | 213 |
| DdeI | CTNAG | 3 cut(s) | 145, 372, 463 |
| DpnI | GATC | 2 cut(s) | 428, 616 |
| DpnII | GATC | 2 cut(s) | 426, 614 |
| Eam1104I | CTCTTC | 1 cut(s) | 348 |
| EarI | CTCTTC | 1 cut(s) | 348 |
| Eco32I | GATATC | 1 cut(s) | 567 |
| Eco57I | CTGAAG | 1 cut(s) | 62 |
| EcoRII | CCWGG | 1 cut(s) | 580 |
| EcoRV | GATATC | 1 cut(s) | 567 |
| FaeI | CATG | 4 cut(s) | 308, 382, 451, 573 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 215, 247 |
| FaqI | GGGAC | 1 cut(s) | 240 |
| FatI | CATG | 4 cut(s) | 304, 378, 447, 569 |
| FauI | CCCGC | 1 cut(s) | 637 |
| HgaI | GACGC | 1 cut(s) | 237 |
| Hin1II | CATG | 4 cut(s) | 308, 382, 451, 573 |
| HindIII | AAGCTT | 2 cut(s) | 95, 251 |
| HinfI | GANTC | 4 cut(s) | 82, 280, 338, 356 |
| HphI | GGTGA | 2 cut(s) | 333, 560 |
| Hpy188I | TCNGA | 4 cut(s) | 81, 87, 285, 466 |
| HpyAV | CCTTC | 6 cut(s) | 16, 100, 121, 157, 217, 293 |
| HpyCH4III | ACNGT | 1 cut(s) | 13 |
| HpyCH4IV | ACGT | 1 cut(s) | 198 |
| HpyCH4V | TGCA | 5 cut(s) | 116, 273, 362, 451, 534 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 487 |
| HpyF3I | CTNAG | 3 cut(s) | 145, 372, 463 |
| HpySE526I | ACGT | 1 cut(s) | 198 |
| Hsp92II | CATG | 4 cut(s) | 308, 382, 451, 573 |
| Kzo9I | GATC | 2 cut(s) | 426, 614 |
| LpnPI | CCDG | 6 cut(s) | 17, 58, 281, 339, 567, 594 |
| MaeII | ACGT | 1 cut(s) | 198 |
| MalI | GATC | 2 cut(s) | 428, 616 |
| MboI | GATC | 2 cut(s) | 426, 614 |
| MboII | GAAGA | 5 cut(s) | 115, 232, 250, 365, 532 |
| MfeI | CAATTG | 1 cut(s) | 452 |
| MflI | RGATCY | 1 cut(s) | 614 |
| MluCI | AATT | 7 cut(s) | 53, 118, 259, 404, 438, 452, 470 |
| MlyI | GAGTC | 2 cut(s) | 332, 365 |
| MnlI | CCTC | 5 cut(s) | 54, 402, 427, 471, 472 |
| MseI | TTAA | 4 cut(s) | 56, 140, 177, 473 |
| MslI | CAYNNNNRTG | 1 cut(s) | 383 |
| MspA1I | CMGCKG | 1 cut(s) | 149 |
| MspR9I | CCNGG | 1 cut(s) | 582 |
| MunI | CAATTG | 1 cut(s) | 452 |
| MvaI | CCWGG | 1 cut(s) | 582 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 487 |
| NdeII | GATC | 2 cut(s) | 426, 614 |
| NlaIII | CATG | 4 cut(s) | 308, 382, 451, 573 |
| NlaIV | GGNNCC | 1 cut(s) | 616 |
| NspI | RCATGY | 2 cut(s) | 308, 451 |
| PfeI | GAWTC | 2 cut(s) | 82, 280 |
| PleI | GAGTC | 2 cut(s) | 332, 364 |
| PpsI | GAGTC | 2 cut(s) | 332, 364 |
| Ppu21I | YACGTR | 1 cut(s) | 199 |
| PshBI | ATTAAT | 1 cut(s) | 177 |
| PsiI | TTATAA | 1 cut(s) | 257 |
| Psp6I | CCWGG | 1 cut(s) | 580 |
| PspGI | CCWGG | 1 cut(s) | 580 |
| PspN4I | GGNNCC | 1 cut(s) | 616 |
| PsuI | RGATCY | 1 cut(s) | 614 |
| PvuII | CAGCTG | 1 cut(s) | 149 |
| RsaI | GTAC | 1 cut(s) | 214 |
| RsaNI | GTAC | 1 cut(s) | 213 |
| RseI | CAYNNNNRTG | 1 cut(s) | 383 |
| SaqAI | TTAA | 4 cut(s) | 56, 140, 177, 473 |
| Sau3AI | GATC | 2 cut(s) | 426, 614 |
| SchI | GAGTC | 2 cut(s) | 332, 365 |
| ScrFI | CCNGG | 1 cut(s) | 582 |
| SetI | ASST | 8 cut(s) | 99, 111, 151, 201, 255, 269, 328, 550 |
| SfcI | CTRYAG | 1 cut(s) | 150 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 383 |
| SmlI | CTYRAG | 1 cut(s) | 98 |
| SmoI | CTYRAG | 1 cut(s) | 98 |
| Sse9I | AATT | 7 cut(s) | 53, 118, 259, 404, 438, 452, 470 |
| SsiI | CCGC | 1 cut(s) | 644 |
| SspI | AATATT | 1 cut(s) | 313 |
| StyD4I | CCNGG | 1 cut(s) | 580 |
| TaaI | ACNGT | 1 cut(s) | 13 |
| TaiI | ACGT | 1 cut(s) | 201 |
| TaqI | TCGA | 1 cut(s) | 246 |
| TasI | AATT | 7 cut(s) | 53, 118, 259, 404, 438, 452, 470 |
| TatI | WGTACW | 1 cut(s) | 212 |
| TfiI | GAWTC | 2 cut(s) | 82, 280 |
| Tru1I | TTAA | 4 cut(s) | 56, 140, 177, 473 |
| Tru9I | TTAA | 4 cut(s) | 56, 140, 177, 473 |
| TspDTI | ATGAA | 4 cut(s) | 380, 407, 417, 533 |
| VspI | ATTAAT | 1 cut(s) | 177 |
| XapI | RAATTY | 1 cut(s) | 259 |
| XceI | RCATGY | 2 cut(s) | 308, 451 |