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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0155031 RchiOBHm_Chr5g0021161 |
| rosa_laevigata | RLG00000032586 |
| rosa_multiflora | Rmu_ssc0000244.1_g000032 |
| rosa_roxburghii | Rroxscaffold_1G00057350 Rroxscaffold_1G00057360 Rroxscaffold_2G00095430 Rroxscaffold_2G00136940 Rroxscaffold_4G00289720 Rroxscaffold_4G00290680 Rroxscaffold_4G00306250 Rroxscaffold_7G00202860 |
| rosa_samantha | Rh5DG153700 |
| rosa_wichuraiana | Rw6G013260 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 234 |
| AciI | CCGC | 2 cut(s) | 248, 282 |
| AcoI | YGGCCR | 1 cut(s) | 184 |
| AgsI | TTSAA | 3 cut(s) | 36, 221, 320 |
| AjnI | CCWGG | 1 cut(s) | 189 |
| AluBI | AGCT | 3 cut(s) | 158, 238, 346 |
| AluI | AGCT | 3 cut(s) | 158, 238, 346 |
| Alw26I | GTCTC | 1 cut(s) | 267 |
| Ama87I | CYCGRG | 1 cut(s) | 333 |
| AoxI | GGCC | 3 cut(s) | 184, 249, 286 |
| ApeKI | GCWGC | 4 cut(s) | 99, 194, 235, 238 |
| AspLEI | GCGC | 1 cut(s) | 235 |
| AsuC2I | CCSGG | 1 cut(s) | 298 |
| AsuHPI | GGTGA | 2 cut(s) | 129, 259 |
| AvaI | CYCGRG | 1 cut(s) | 333 |
| BbvI | GCAGC | 4 cut(s) | 86, 206, 225, 247 |
| BceAI | ACGGC | 1 cut(s) | 295 |
| BciT130I | CCWGG | 1 cut(s) | 191 |
| BcnI | CCSGG | 1 cut(s) | 298 |
| BcoDI | GTCTC | 1 cut(s) | 267 |
| BfmI | CTRYAG | 2 cut(s) | 239, 259 |
| BisI | GCNGC | 5 cut(s) | 100, 195, 236, 239, 249 |
| BlsI | GCNGC | 5 cut(s) | 101, 196, 237, 240, 250 |
| Bme1390I | CCNGG | 2 cut(s) | 191, 298 |
| BmeT110I | CYCGRG | 1 cut(s) | 333 |
| BmrFI | CCNGG | 2 cut(s) | 191, 298 |
| BmsI | GCATC | 1 cut(s) | 111 |
| BpuMI | CCSGG | 1 cut(s) | 298 |
| BsaBI | GATNNNNATC | 1 cut(s) | 75 |
| BsaWI | WCCGGW | 1 cut(s) | 269 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 192, 222 |
| Bse118I | RCCGGY | 1 cut(s) | 182 |
| Bse8I | GATNNNNATC | 1 cut(s) | 75 |
| BseBI | CCWGG | 1 cut(s) | 191 |
| BseGI | GGATG | 1 cut(s) | 76 |
| BseJI | GATNNNNATC | 1 cut(s) | 75 |
| BseXI | GCAGC | 4 cut(s) | 86, 206, 225, 247 |
| Bsh1285I | CGRYCG | 1 cut(s) | 229 |
| BshFI | GGCC | 3 cut(s) | 186, 251, 288 |
| BsiEI | CGRYCG | 1 cut(s) | 229 |
| BsiHKCI | CYCGRG | 1 cut(s) | 333 |
| BsiSI | CCGG | 3 cut(s) | 183, 270, 298 |
| BsmAI | GTCTC | 1 cut(s) | 267 |
| BsmBI | CGTCTC | 1 cut(s) | 267 |
| BsnI | GGCC | 3 cut(s) | 186, 251, 288 |
| BsoBI | CYCGRG | 1 cut(s) | 333 |
| BspACI | CCGC | 2 cut(s) | 248, 282 |
| BspANI | GGCC | 3 cut(s) | 186, 251, 288 |
| BspMAI | CTGCAG | 2 cut(s) | 243, 263 |
| BsrFI | RCCGGY | 1 cut(s) | 182 |
| BssAI | RCCGGY | 1 cut(s) | 182 |
| Bst2UI | CCWGG | 1 cut(s) | 191 |
| Bst4CI | ACNGT | 2 cut(s) | 12, 230 |
| BstF5I | GGATG | 1 cut(s) | 76 |
| BstHHI | GCGC | 1 cut(s) | 235 |
| BstMAI | GTCTC | 1 cut(s) | 267 |
| BstMCI | CGRYCG | 1 cut(s) | 229 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 183 |
| BstNI | CCWGG | 1 cut(s) | 191 |
| BstSCI | CCNGG | 2 cut(s) | 189, 296 |
| BstSFI | CTRYAG | 2 cut(s) | 239, 259 |
| BstV1I | GCAGC | 4 cut(s) | 86, 206, 225, 247 |
| BsuRI | GGCC | 3 cut(s) | 186, 251, 288 |
| BtsCI | GGATG | 1 cut(s) | 76 |
| BtsI | GCAGTG | 1 cut(s) | 256 |
| BtsIMutI | CAGTG | 2 cut(s) | 8, 256 |
| CfoI | GCGC | 1 cut(s) | 235 |
| Cfr10I | RCCGGY | 1 cut(s) | 182 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 24, 59 |
| CviJI | RGCY | 6 cut(s) | 158, 186, 238, 251, 288, 346 |
| CviKI_1 | RGCY | 6 cut(s) | 158, 186, 238, 251, 288, 346 |
| EaeI | YGGCCR | 1 cut(s) | 184 |
| EciI | GGCGGA | 1 cut(s) | 297 |
| Eco88I | CYCGRG | 1 cut(s) | 333 |
| EcoRII | CCWGG | 1 cut(s) | 189 |
| Esp3I | CGTCTC | 1 cut(s) | 267 |
| FaiI | YATR | 2 cut(s) | 60, 329 |
| Fnu4HI | GCNGC | 5 cut(s) | 100, 195, 236, 239, 249 |
| FokI | GGATG | 1 cut(s) | 83 |
| Fsp4HI | GCNGC | 5 cut(s) | 100, 195, 236, 239, 249 |
| FspI | TGCGCA | 1 cut(s) | 234 |
| GlaI | GCGC | 1 cut(s) | 234 |
| GluI | GCNGC | 5 cut(s) | 100, 195, 236, 239, 249 |
| HaeIII | GGCC | 3 cut(s) | 186, 251, 288 |
| HapII | CCGG | 3 cut(s) | 183, 270, 298 |
| HhaI | GCGC | 1 cut(s) | 235 |
| Hin6I | GCGC | 1 cut(s) | 233 |
| HinP1I | GCGC | 1 cut(s) | 233 |
| HinfI | GANTC | 1 cut(s) | 264 |
| HpaII | CCGG | 3 cut(s) | 183, 270, 298 |
| HphI | GGTGA | 2 cut(s) | 129, 259 |
| Hpy166II | GTNNAC | 1 cut(s) | 8 |
| Hpy188III | TCNNGA | 2 cut(s) | 221, 333 |
| Hpy8I | GTNNAC | 1 cut(s) | 8 |
| Hpy99I | CGWCG | 1 cut(s) | 281 |
| HpyAV | CCTTC | 1 cut(s) | 326 |
| HpyCH4III | ACNGT | 2 cut(s) | 12, 230 |
| HpyCH4V | TGCA | 5 cut(s) | 102, 241, 256, 261, 306 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 183 |
| HspAI | GCGC | 1 cut(s) | 233 |
| LmnI | GCTCC | 1 cut(s) | 182 |
| LpnPI | CCDG | 7 cut(s) | 176, 196, 203, 227, 283, 309, 311 |
| Lsp1109I | GCAGC | 4 cut(s) | 86, 206, 225, 247 |
| LweI | GCATC | 1 cut(s) | 111 |
| MboII | GAAGA | 1 cut(s) | 19 |
| MluCI | AATT | 1 cut(s) | 94 |
| MnlI | CCTC | 4 cut(s) | 137, 218, 238, 278 |
| MseI | TTAA | 3 cut(s) | 17, 66, 93 |
| MspA1I | CMGCKG | 1 cut(s) | 238 |
| MspI | CCGG | 3 cut(s) | 183, 270, 298 |
| MspR9I | CCNGG | 2 cut(s) | 191, 298 |
| MvaI | CCWGG | 1 cut(s) | 191 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 183 |
| NciI | CCSGG | 1 cut(s) | 298 |
| NsbI | TGCGCA | 1 cut(s) | 234 |
| PaeR7I | CTCGAG | 1 cut(s) | 333 |
| PfeI | GAWTC | 1 cut(s) | 264 |
| PkrI | GCNGC | 5 cut(s) | 101, 196, 237, 240, 250 |
| Psp6I | CCWGG | 1 cut(s) | 189 |
| PspGI | CCWGG | 1 cut(s) | 189 |
| PstI | CTGCAG | 2 cut(s) | 243, 263 |
| PvuII | CAGCTG | 1 cut(s) | 238 |
| SaqAI | TTAA | 3 cut(s) | 17, 66, 93 |
| SatI | GCNGC | 5 cut(s) | 100, 195, 236, 239, 249 |
| ScrFI | CCNGG | 2 cut(s) | 191, 298 |
| SetI | ASST | 6 cut(s) | 160, 210, 240, 318, 328, 348 |
| SfaNI | GCATC | 1 cut(s) | 111 |
| SfcI | CTRYAG | 2 cut(s) | 239, 259 |
| Sfr274I | CTCGAG | 1 cut(s) | 333 |
| SlaI | CTCGAG | 1 cut(s) | 333 |
| SmlI | CTYRAG | 1 cut(s) | 333 |
| SmoI | CTYRAG | 1 cut(s) | 333 |
| Sse9I | AATT | 1 cut(s) | 94 |
| SsiI | CCGC | 2 cut(s) | 248, 282 |
| StyD4I | CCNGG | 2 cut(s) | 189, 296 |
| TaaI | ACNGT | 2 cut(s) | 12, 230 |
| TaqI | TCGA | 1 cut(s) | 334 |
| TasI | AATT | 1 cut(s) | 94 |
| TauI | GCSGC | 1 cut(s) | 251 |
| TfiI | GAWTC | 1 cut(s) | 264 |
| Tru1I | TTAA | 3 cut(s) | 17, 66, 93 |
| Tru9I | TTAA | 3 cut(s) | 17, 66, 93 |
| TscAI | CASTG | 2 cut(s) | 15, 263 |
| TseI | GCWGC | 4 cut(s) | 99, 194, 235, 238 |
| TspDTI | ATGAA | 1 cut(s) | 87 |
| TspRI | CASTG | 2 cut(s) | 15, 263 |
| XhoI | CTCGAG | 1 cut(s) | 333 |