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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD07G1192700.v1.1 |
| rosa_chinensis | RchiOBHm_Chr2g0143491 |
| rosa_multiflora | Rmu_sc0005795.1_g000010 |
| rosa_roxburghii | Rroxscaffold_4G00326350 |
| rosa_samantha | Rh1AG171600 Rh2CG177900 Rh4CG356500 Rh5BG541500 Rh5CG564100 Rh6DG130700 Rh7AG226100 Rh7CG240400 Rh7CG519100 Rh7DG235000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 4, 45, 51 |
| AcoI | YGGCCR | 1 cut(s) | 135 |
| AcuI | CTGAAG | 1 cut(s) | 323 |
| AcyI | GRCGYC | 1 cut(s) | 15 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 270 |
| AgsI | TTSAA | 2 cut(s) | 254, 294 |
| AjnI | CCWGG | 1 cut(s) | 9 |
| AoxI | GGCC | 1 cut(s) | 135 |
| ApeKI | GCWGC | 1 cut(s) | 179 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 204 |
| AspS9I | GGNCC | 1 cut(s) | 6 |
| AsuHPI | GGTGA | 1 cut(s) | 30 |
| AvaII | GGWCC | 1 cut(s) | 6 |
| BalI | TGGCCA | 1 cut(s) | 137 |
| BbvI | GCAGC | 1 cut(s) | 166 |
| BccI | CCATC | 1 cut(s) | 146 |
| BciT130I | CCWGG | 1 cut(s) | 11 |
| BisI | GCNGC | 1 cut(s) | 180 |
| BlsI | GCNGC | 1 cut(s) | 181 |
| Bme1390I | CCNGG | 1 cut(s) | 11 |
| Bme18I | GGWCC | 1 cut(s) | 6 |
| BmgT120I | GGNCC | 1 cut(s) | 6 |
| BmiI | GGNNCC | 1 cut(s) | 8 |
| BmrFI | CCNGG | 1 cut(s) | 11 |
| BmrI | ACTGGG | 1 cut(s) | 107 |
| BmuI | ACTGGG | 1 cut(s) | 107 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 84, 116 |
| BpuEI | CTTGAG | 1 cut(s) | 64 |
| BsaHI | GRCGYC | 1 cut(s) | 15 |
| BsaJI | CCNNGG | 2 cut(s) | 9, 10 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 270 |
| Bse1I | ACTGG | 1 cut(s) | 113 |
| Bse3DI | GCAATG | 1 cut(s) | 334 |
| BseBI | CCWGG | 1 cut(s) | 11 |
| BseDI | CCNNGG | 2 cut(s) | 9, 10 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 270 |
| BseMI | GCAATG | 1 cut(s) | 334 |
| BseNI | ACTGG | 1 cut(s) | 113 |
| BseXI | GCAGC | 1 cut(s) | 166 |
| BshFI | GGCC | 1 cut(s) | 137 |
| BslFI | GGGAC | 1 cut(s) | 298 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 270 |
| BsmFI | GGGAC | 1 cut(s) | 298 |
| BsnI | GGCC | 1 cut(s) | 137 |
| BspACI | CCGC | 3 cut(s) | 4, 45, 51 |
| BspANI | GGCC | 1 cut(s) | 137 |
| BspLI | GGNNCC | 1 cut(s) | 8 |
| BsrDI | GCAATG | 1 cut(s) | 334 |
| BsrI | ACTGG | 1 cut(s) | 113 |
| BssECI | CCNNGG | 2 cut(s) | 9, 10 |
| BssNI | GRCGYC | 1 cut(s) | 15 |
| Bst2UI | CCWGG | 1 cut(s) | 11 |
| Bst4CI | ACNGT | 1 cut(s) | 191 |
| Bst6I | CTCTTC | 2 cut(s) | 160, 371 |
| BstACI | GRCGYC | 1 cut(s) | 15 |
| BstC8I | GCNNGC | 1 cut(s) | 184 |
| BstNI | CCWGG | 1 cut(s) | 11 |
| BstSCI | CCNGG | 1 cut(s) | 9 |
| BstV1I | GCAGC | 1 cut(s) | 166 |
| BsuRI | GGCC | 1 cut(s) | 137 |
| BtsIMutI | CAGTG | 1 cut(s) | 120 |
| Cac8I | GCNNGC | 1 cut(s) | 184 |
| Cfr13I | GGNCC | 1 cut(s) | 6 |
| CseI | GACGC | 1 cut(s) | 4 |
| CviJI | RGCY | 3 cut(s) | 137, 179, 385 |
| CviKI_1 | RGCY | 3 cut(s) | 137, 179, 385 |
| EaeI | YGGCCR | 1 cut(s) | 135 |
| Eam1104I | CTCTTC | 2 cut(s) | 160, 371 |
| EarI | CTCTTC | 2 cut(s) | 160, 371 |
| EciI | GGCGGA | 2 cut(s) | 34, 40 |
| Eco47I | GGWCC | 1 cut(s) | 6 |
| Eco57I | CTGAAG | 1 cut(s) | 323 |
| EcoRII | CCWGG | 1 cut(s) | 9 |
| FaiI | YATR | 4 cut(s) | 269, 271, 279, 281 |
| FaqI | GGGAC | 1 cut(s) | 298 |
| FauNDI | CATATG | 1 cut(s) | 269 |
| Fnu4HI | GCNGC | 1 cut(s) | 180 |
| Fsp4HI | GCNGC | 1 cut(s) | 180 |
| GluI | GCNGC | 1 cut(s) | 180 |
| HaeIII | GGCC | 1 cut(s) | 137 |
| HgaI | GACGC | 1 cut(s) | 4 |
| Hin1I | GRCGYC | 1 cut(s) | 15 |
| HinfI | GANTC | 3 cut(s) | 32, 247, 257 |
| HphI | GGTGA | 1 cut(s) | 30 |
| Hpy188I | TCNGA | 5 cut(s) | 25, 58, 92, 199, 214 |
| Hpy188III | TCNNGA | 3 cut(s) | 101, 254, 390 |
| Hpy99I | CGWCG | 1 cut(s) | 29 |
| HpyAV | CCTTC | 2 cut(s) | 85, 346 |
| HpyCH4III | ACNGT | 1 cut(s) | 191 |
| HpyCH4V | TGCA | 1 cut(s) | 298 |
| Hsp92I | GRCGYC | 1 cut(s) | 15 |
| LpnPI | CCDG | 4 cut(s) | 23, 119, 126, 159 |
| Lsp1109I | GCAGC | 1 cut(s) | 166 |
| MaeIII | GTNAC | 2 cut(s) | 36, 63 |
| MboII | GAAGA | 3 cut(s) | 177, 242, 388 |
| MlsI | TGGCCA | 1 cut(s) | 137 |
| MluCI | AATT | 1 cut(s) | 204 |
| MluNI | TGGCCA | 1 cut(s) | 137 |
| MmeI | TCCRAC | 3 cut(s) | 48, 81, 177 |
| MnlI | CCTC | 6 cut(s) | 52, 58, 64, 165, 220, 274 |
| Mox20I | TGGCCA | 1 cut(s) | 137 |
| MroXI | GAANNNNTTC | 1 cut(s) | 204 |
| MscI | TGGCCA | 1 cut(s) | 137 |
| MseI | TTAA | 1 cut(s) | 222 |
| Msp20I | TGGCCA | 1 cut(s) | 137 |
| MspR9I | CCNGG | 1 cut(s) | 11 |
| MvaI | CCWGG | 1 cut(s) | 11 |
| NdeI | CATATG | 1 cut(s) | 269 |
| NlaIV | GGNNCC | 1 cut(s) | 8 |
| NmuCI | GTSAC | 2 cut(s) | 36, 63 |
| PasI | CCCWGGG | 1 cut(s) | 10 |
| PdmI | GAANNNNTTC | 1 cut(s) | 204 |
| PfeI | GAWTC | 3 cut(s) | 32, 247, 257 |
| PkrI | GCNGC | 1 cut(s) | 181 |
| Psp6I | CCWGG | 1 cut(s) | 9 |
| PspGI | CCWGG | 1 cut(s) | 9 |
| PspN4I | GGNNCC | 1 cut(s) | 8 |
| PspPI | GGNCC | 1 cut(s) | 6 |
| SaqAI | TTAA | 1 cut(s) | 222 |
| SatI | GCNGC | 1 cut(s) | 180 |
| Sau96I | GGNCC | 1 cut(s) | 6 |
| ScrFI | CCNGG | 1 cut(s) | 11 |
| SetI | ASST | 2 cut(s) | 176, 266 |
| SinI | GGWCC | 1 cut(s) | 6 |
| SmlI | CTYRAG | 1 cut(s) | 79 |
| SmoI | CTYRAG | 1 cut(s) | 79 |
| Sse9I | AATT | 1 cut(s) | 204 |
| SsiI | CCGC | 3 cut(s) | 4, 45, 51 |
| StyD4I | CCNGG | 1 cut(s) | 9 |
| TaaI | ACNGT | 1 cut(s) | 191 |
| TaqI | TCGA | 1 cut(s) | 102 |
| TasI | AATT | 1 cut(s) | 204 |
| TfiI | GAWTC | 3 cut(s) | 32, 247, 257 |
| Tru1I | TTAA | 1 cut(s) | 222 |
| Tru9I | TTAA | 1 cut(s) | 222 |
| TscAI | CASTG | 1 cut(s) | 120 |
| TseFI | GTSAC | 2 cut(s) | 36, 63 |
| TseI | GCWGC | 1 cut(s) | 179 |
| Tsp45I | GTSAC | 2 cut(s) | 36, 63 |
| TspDTI | ATGAA | 1 cut(s) | 384 |
| TspRI | CASTG | 1 cut(s) | 120 |
| VpaK11BI | GGWCC | 1 cut(s) | 6 |
| XmnI | GAANNNNTTC | 1 cut(s) | 204 |