Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0008907

Physical Location & Seq

Genomic Coordinates Forward (+)

15814135 .. 15817719

Gene Structure 3585 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00345410.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2208 bp

ATGGAGAGCAGGTTCCCAAACCCCAGAAGTAGGTACTCTTTGAGTGAAGCAATAATGAGTACAAACAGTACTGGGATTACTAGTAATAATGGAGGAGGAGTAGTTCCATACAGTACTGATACTATTAGACCTCATGAGGAACGCAAGAGTATCCAGTTTACTGATTTCCCGACCAATTATGAAGAAATCGTGAAGTTCATGAATGGAAAGCATTCTCCGGAGGACAACACTGACTTTCCTGTTGATGACCTTTTCACGATCACTGAGATCATCATTAAGCATGCAACCGATGATTCGATGGTCAATGATATTCTGAAGGAGACCAATGCCCCATATGAGAAGGTCCCCAGCATCAACGACGGATTCATCTCACCATTGTGCATTCTTAAGTCCATTTGCTGCGAGATCTCAACATGTAAGGATAAGGCTTGTTCTGGTGAAGAAATTTCCATCCGAACAAAGAGGGAAGTGATATTTGACAAGCTAAAACCCTATCCATGGGAGGCTAAGGCAGTGCTGGCCCTAGCGGCTTTCGCTTTGGAATATGGAGACTTCTGGCACCTCGCCCAGCTCTATGGCCAATGTAACCAACTTACCAATTCAGTGGCTATCCTGAAGCGAGTACCCGTCCTTATCAATCAAGCGACCTTGAAGGAACGCCAGGGACAAGTACTTGAACTGAATGGTCTCATCAAGGACACTTTGGAAGTGACTCGTTTGATCTGTAAGGTTGAGGGTCTTTGTATTCTCAATCGTACAGAGGATCTACCAACGTTGCAGACTGCAGTAGATGATATCCCAATCTATGTCTTTTGGATAATCACAGCAATTGTAGCTTGCGCGGCTAAGGTCACCCATCTCACTAGTGATGAAAAGAAGCCATACCCTCTATCCGATGTTGTTAAAGAAATCGGGCGCATACGGGAGATCCTTGATGAACTGCATGGAAGATGCGTAGAAGAACTAGGTGGCCTACTTAGTTGGAATCAGGTGGCAAAGAACTACAAGAAGCTGCTAAGGAAAATGAAGGACGCCCAACGCACTCGTGAGATTACGGAGGTTATTAAAACCCTGATTCTTTTCAAGGACGGGAAGCTACCTGTCATTAGTGAGGGTAATAGCAACGAGGAGGTTAAGTTTGAAACATTTGCCGACCTAGTAAAGGAAAACTCTGTGTTGTTTTACATTTCGAGCCTGGAGAAAATTATAGAGGCTGACATTTCCGATCTGATAAAAGTTTATGATGAAATTCAAAAAAATAATATGAAATGGAGGATTGTGTGGATCCCCATTGTCGAAGAAGGGACGAAAAACCAGACTGAGAAGTTTGAGAAACGGGGATCGAAGATGCCATGGTACAAGGTGCAGTTTTTTTCTTCAACAGTCATCAAGTACCTCAAGGAGGAATGGTCCTACACGGGTAATGCAATGTCCTTGGTGATGGACCCAGAAGGGCAGAGGAAATACCCCAATGCACTCACCTTGATCCGGAACTATAAAGATAAATTCTTTCATATCCTCCAGCAGCTTCCATTGGTCTCTATAGCTGCGAATATAAAGAACAAAACTCTAGAAAATTGGAGCAACGATGACACCAAGTGCATTTTCTTATGCGGAGGCATGGATGAGTCGCACTTTGACGATTTGAAAAAGAAAGTGATGGACGCAAGTGATACCATCAAAGATTTCGGTGTGTCGATTGAGTTATTTAGGCTGGACTCACTGGAGGGAAACGAGGCAAAAGCAGGAGAGCAACCAAAATACTCGGCAGATAATGAGAGCTTTTGGTCGGGGATAAAGTGCTTGTTGGATAATTACATACATCGAGTGGAGTGCAAGACCGTGACAAAAGAACTCTGCAAGCTACTGTCCTACAAAAATCATGGGGAATGGGTTATGGTTACCCAAGGGCATAAGCTTATAACCAGTGGTCGTCCTGTCACAATTTCTATGGCCCTGGGATCTTTGTCACATTCGAATCAACAAAACTTAGTACGTACAAAATCAGCATTCGGAGATTATTTCCTTCAAGAACATAAGAAGGCTATAACTGTTTATCTGGCTGATAAAGATCAGCATGATCCCGACTGCTGCGAATTTGTCGTTTCAGTTGGGAATCTCCCCAAGAACATGGACTGCCCAGTCTGCGACCGTTCCATGGAACGCATCTTTATCATCAGCTACAAGTGCTGCCACGGTAGTCGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SEO_C SEO_N

Protein Analysis

735

Amino Acids

83.73

Weight (kDa)

6.02

Isoelectric Point (pI)

32.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SEO_N	PF14576	62 - 321	1.3e-47	Sieve element occlusion N-terminus
SEO_C	PF14577	608 - 732	1.6e-08	Sieve element occlusion C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008907)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr4g0389961 RchiOBHm_Chr4g0400271 RchiOBHm_Chr4g0400571
rosa_laevigata	RLG00000009943
rosa_multiflora	Rmu_sc0003687.1_g000008 Rmu_sc0004336.1_g000023 Rmu_sc0005451.1_g000008 Rmu_ssc0000245.1_g000002
rosa_roxburghii	Rroxscaffold_5G00336110 Rroxscaffold_5G00345410
rosa_rugosa	Rorug03G0327600 Rorug04G0024500
rosa_samantha	Rh4AG030800 Rh4AG102000 Rh4BG024200 Rh4BG097700 Rh4CG033300 Rh4CG110100 Rh4DG024300
rosa_wichuraiana	Rw4G002340 Rw4G002380 Rw4G008280 Rw4G008290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1922
AasI	GACNNNNNNGTC	1 cut(s)	2141
AccB1I	GGYRCC	1 cut(s)	558
AccII	CGCG	1 cut(s)	842
AccIII	TCCGGA	2 cut(s)	217, 1488
AciI	CCGC	3 cut(s)	527, 842, 1614
AclI	AACGTT	1 cut(s)	773
AclWI	GGATC	8 cut(s)	771, 922, 1279, 1292, 1348, 1480, 1969, 2075
AcoI	YGGCCR	1 cut(s)	577
AcsI	RAATTY	4 cut(s)	444, 1248, 1505, 2096
AcuI	CTGAAG	2 cut(s)	335, 635
AcyI	GRCGYC	1 cut(s)	1032
AdeI	CACNNNGTG	1 cut(s)	1599
AfiI	CCNNNNNNNGG	6 cut(s)	30, 498, 1162, 1402, 1488, 2158
AflII	CTTAAG	1 cut(s)	386
AflIII	ACRYGT	1 cut(s)	413
AgsI	TTSAA	8 cut(s)	652, 677, 1084, 1142, 1253, 1380, 1648, 2030
AhlI	ACTAGT	2 cut(s)	80, 863
AjnI	CCWGG	3 cut(s)	660, 1194, 1956
AjuI	GAANNNNNNNTTGG	2 cut(s)	1589, 1621
AleI	CACNNNNGTG	1 cut(s)	376
AloI	GAACNNNNNNTCC	3 cut(s)	28, 87, 119
Alw26I	GTCTC	4 cut(s)	314, 543, 692, 1543
AlwI	GGATC	8 cut(s)	771, 922, 1279, 1292, 1348, 1480, 1969, 2075
Aor13HI	TCCGGA	2 cut(s)	217, 1488
AoxI	GGCC	4 cut(s)	519, 577, 970, 1953
ApeKI	GCWGC	6 cut(s)	399, 1012, 1525, 1547, 2091, 2190
ApoI	RAATTY	4 cut(s)	444, 1248, 1505, 2096
Asp700I	GAANNNNTTC	1 cut(s)	211
AspLEI	GCGC	2 cut(s)	842, 918
AspS9I	GGNCC	5 cut(s)	343, 520, 1410, 1444, 1954
AsuHPI	GGTGA	5 cut(s)	363, 449, 844, 1450, 1471
AsuII	TTCGAA	1 cut(s)	1976
AvaII	GGWCC	3 cut(s)	343, 1410, 1444
BalI	TGGCCA	1 cut(s)	579
BamHI	GGATCC	1 cut(s)	1284
BanI	GGYRCC	1 cut(s)	558
BauI	CACGAG	1 cut(s)	1044
BbvI	GCAGC	6 cut(s)	386, 999, 1534, 1537, 2078, 2177
BccI	CCATC	6 cut(s)	292, 458, 864, 1435, 1654, 1685
BcgI	CGANNNNNNTGC	2 cut(s)	1815, 1849
BciT130I	CCWGG	3 cut(s)	662, 1196, 1958
BciVI	GTATCC	1 cut(s)	161
BcoDI	GTCTC	4 cut(s)	314, 543, 692, 1543
BcuI	ACTAGT	2 cut(s)	80, 863
BfaI	CTAG	6 cut(s)	81, 524, 864, 965, 1157, 1571
BfmI	CTRYAG	2 cut(s)	783, 1542
BfrI	CTTAAG	1 cut(s)	386
BfuI	GTATCC	1 cut(s)	161
BglI	GCCNNNNNGGC	1 cut(s)	527
BglII	AGATCT	1 cut(s)	405
BisI	GCNGC	8 cut(s)	400, 528, 843, 1013, 1526, 1548, 2092, 2191
BlsI	GCNGC	8 cut(s)	401, 529, 844, 1014, 1527, 1549, 2093, 2192
BmcAI	AGTACT	3 cut(s)	70, 115, 672
Bme1390I	CCNGG	3 cut(s)	662, 1196, 1958
Bme18I	GGWCC	3 cut(s)	343, 1410, 1444
BmgT120I	GGNCC	5 cut(s)	343, 520, 1410, 1444, 1954
BmiI	GGNNCC	5 cut(s)	14, 345, 560, 1286, 1446
BmrFI	CCNGG	3 cut(s)	662, 1196, 1958
BmrI	ACTGGG	2 cut(s)	81, 2135
BmsI	GCATC	4 cut(s)	360, 941, 1338, 2175
BmuI	ACTGGG	2 cut(s)	81, 2135
BpmI	CTGGAG	3 cut(s)	1217, 1505, 1745
Bpu10I	CCTNAGC	3 cut(s)	507, 846, 1016
Bpu14I	TTCGAA	1 cut(s)	1976
BpuEI	CTTGAG	1 cut(s)	1382
BsaAI	YACGTR	1 cut(s)	1997
BsaBI	GATNNNNATC	1 cut(s)	2070
BsaHI	GRCGYC	1 cut(s)	1032
BsaI	GGTCTC	3 cut(s)	314, 692, 1543
BsaJI	CCNNGG	9 cut(s)	497, 661, 1352, 1434, 1906, 1956, 1957, 2157, 2194
BsaWI	WCCGGW	2 cut(s)	217, 1488
BsaXI	ACNNNNNCTCC	9 cut(s)	26, 84, 87, 114, 117, 1121, 1151, 1394, 1424
Bsc4I	CCNNNNNNNGG	6 cut(s)	30, 498, 1162, 1402, 1488, 2158
Bse1I	ACTGG	5 cut(s)	76, 154, 1728, 1926, 2141
Bse3DI	GCAATG	1 cut(s)	1434
Bse8I	GATNNNNATC	1 cut(s)	2070
BseAI	TCCGGA	2 cut(s)	217, 1488
BseBI	CCWGG	3 cut(s)	662, 1196, 1958
BseDI	CCNNGG	9 cut(s)	497, 661, 1352, 1434, 1906, 1956, 1957, 2157, 2194
BseGI	GGATG	2 cut(s)	450, 1630
BseJI	GATNNNNATC	1 cut(s)	2070
BseLI	CCNNNNNNNGG	6 cut(s)	30, 498, 1162, 1402, 1488, 2158
BseMI	GCAATG	1 cut(s)	1434
BseMII	CTCAG	2 cut(s)	255, 1311
BseNI	ACTGG	5 cut(s)	76, 154, 1728, 1926, 2141
BseRI	GAGGAG	3 cut(s)	108, 111, 1142
BseXI	GCAGC	6 cut(s)	386, 999, 1534, 1537, 2078, 2177
BseYI	CCCAGC	2 cut(s)	347, 567
BsgI	GTGCAG	1 cut(s)	1385
Bsh1236I	CGCG	1 cut(s)	842
Bsh1285I	CGRYCG	1 cut(s)	2152
BshFI	GGCC	4 cut(s)	521, 579, 972, 1955
BshNI	GGYRCC	1 cut(s)	558
BsiEI	CGRYCG	1 cut(s)	2152
BsiSI	CCGG	2 cut(s)	218, 1489
BslFI	GGGAC	3 cut(s)	329, 678, 1318
BslI	CCNNNNNNNGG	6 cut(s)	30, 498, 1162, 1402, 1488, 2158
BsmAI	GTCTC	4 cut(s)	314, 543, 692, 1543
BsmFI	GGGAC	3 cut(s)	329, 678, 1318
BsmI	GAATGC	3 cut(s)	211, 381, 2009
BsnI	GGCC	4 cut(s)	521, 579, 972, 1955
Bso31I	GGTCTC	3 cut(s)	314, 692, 1543
Bsp119I	TTCGAA	1 cut(s)	1976
Bsp13I	TCCGGA	2 cut(s)	217, 1488
Bsp19I	CCATGG	3 cut(s)	497, 1352, 2157
BspACI	CCGC	3 cut(s)	527, 842, 1614
BspANI	GGCC	4 cut(s)	521, 579, 972, 1955
BspCNI	CTCAG	2 cut(s)	256, 1312
BspEI	TCCGGA	2 cut(s)	217, 1488
BspFNI	CGCG	1 cut(s)	842
BspHI	TCATGA	2 cut(s)	133, 198
BspLI	GGNNCC	5 cut(s)	14, 345, 560, 1286, 1446
BspMAI	CTGCAG	1 cut(s)	787
BspPI	GGATC	8 cut(s)	771, 922, 1279, 1292, 1348, 1480, 1969, 2075
BspT104I	TTCGAA	1 cut(s)	1976
BspT107I	GGYRCC	1 cut(s)	558
BspTI	CTTAAG	1 cut(s)	386
BspTNI	GGTCTC	3 cut(s)	314, 692, 1543
BsrDI	GCAATG	1 cut(s)	1434
BsrI	ACTGG	5 cut(s)	76, 154, 1728, 1926, 2141
BssECI	CCNNGG	9 cut(s)	497, 661, 1352, 1434, 1906, 1956, 1957, 2157, 2194
BssNI	GRCGYC	1 cut(s)	1032
BssSI	CACGAG	1 cut(s)	1044
BssT1I	CCWWGG	5 cut(s)	497, 1352, 1434, 1906, 2157
Bst2BI	CACGAG	1 cut(s)	1044
Bst2UI	CCWGG	3 cut(s)	662, 1196, 1958
Bst4CI	ACNGT	8 cut(s)	68, 113, 1384, 1843, 1869, 2053, 2153, 2198
BstACI	GRCGYC	1 cut(s)	1032
BstAFI	CTTAAG	1 cut(s)	386
BstBAI	YACGTR	1 cut(s)	1997
BstBI	TTCGAA	1 cut(s)	1976
BstC8I	GCNNGC	4 cut(s)	282, 519, 838, 1862
BstDEI	CTNAG	7 cut(s)	264, 507, 846, 977, 1016, 1320, 1990
BstDSI	CCRYGG	4 cut(s)	497, 1352, 2157, 2194
BstEII	GGTNACC	2 cut(s)	850, 1900
BstENI	CCTNNNNNAGG	2 cut(s)	1160, 1400
BstF5I	GGATG	2 cut(s)	450, 1630
BstFNI	CGCG	1 cut(s)	842
BstHHI	GCGC	2 cut(s)	842, 918
BstMAI	GTCTC	4 cut(s)	314, 543, 692, 1543
BstMCI	CGRYCG	1 cut(s)	2152
BstMWI	GCNNNNNNNGC	7 cut(s)	518, 527, 533, 833, 842, 2145, 2187
BstNI	CCWGG	3 cut(s)	662, 1196, 1958
BstNSI	RCATGY	2 cut(s)	284, 417
BstPI	GGTNACC	2 cut(s)	850, 1900
BstSCI	CCNGG	3 cut(s)	660, 1194, 1956
BstSFI	CTRYAG	2 cut(s)	783, 1542
BstSNI	TACGTA	1 cut(s)	1997
BstUI	CGCG	1 cut(s)	842
BstV1I	GCAGC	6 cut(s)	386, 999, 1534, 1537, 2078, 2177
BstX2I	RGATCY	5 cut(s)	405, 763, 927, 1284, 1961
BstXI	CCANNNNNNTGG	3 cut(s)	575, 604, 2131
BstYI	RGATCY	5 cut(s)	405, 763, 927, 1284, 1961
BsuI	GTATCC	1 cut(s)	161
BsuRI	GGCC	4 cut(s)	521, 579, 972, 1955
BtgI	CCRYGG	4 cut(s)	497, 1352, 2157, 2194
BtsCI	GGATG	2 cut(s)	450, 1630
BtsI	GCAGTG	1 cut(s)	519
BtsIMutI	CAGTG	6 cut(s)	228, 261, 519, 609, 1721, 1933
Cac8I	GCNNGC	4 cut(s)	282, 519, 838, 1862
CciI	TCATGA	2 cut(s)	133, 198
CfoI	GCGC	2 cut(s)	842, 918
Cfr13I	GGNCC	5 cut(s)	343, 520, 1410, 1444, 1954
CseI	GACGC	2 cut(s)	1040, 1673
DdeI	CTNAG	7 cut(s)	264, 507, 846, 977, 1016, 1320, 1990
DraIII	CACNNNGTG	1 cut(s)	1599
DrdI	GACNNNNNNGTC	1 cut(s)	2141
DseDI	GACNNNNNNGTC	1 cut(s)	2141
EaeI	YGGCCR	1 cut(s)	577
Eco105I	TACGTA	1 cut(s)	1997
Eco130I	CCWWGG	5 cut(s)	497, 1352, 1434, 1906, 2157
Eco31I	GGTCTC	3 cut(s)	314, 692, 1543
Eco32I	GATATC	1 cut(s)	796
Eco47I	GGWCC	3 cut(s)	343, 1410, 1444
Eco57I	CTGAAG	2 cut(s)	335, 635
Eco91I	GGTNACC	2 cut(s)	850, 1900
EcoNI	CCTNNNNNAGG	2 cut(s)	1160, 1400
EcoO109I	RGGNCCY	1 cut(s)	343
EcoO65I	GGTNACC	2 cut(s)	850, 1900
EcoRII	CCWGG	3 cut(s)	660, 1194, 1956
EcoRV	GATATC	1 cut(s)	796
EcoT14I	CCWWGG	5 cut(s)	497, 1352, 1434, 1906, 2157
ErhI	CCWWGG	5 cut(s)	497, 1352, 1434, 1906, 2157
FaqI	GGGAC	3 cut(s)	329, 678, 1318
FauNDI	CATATG	1 cut(s)	334
Fnu4HI	GCNGC	8 cut(s)	400, 528, 843, 1013, 1526, 1548, 2092, 2191
FokI	GGATG	2 cut(s)	437, 1637
Fsp4HI	GCNGC	8 cut(s)	400, 528, 843, 1013, 1526, 1548, 2092, 2191
FspBI	CTAG	6 cut(s)	81, 524, 864, 965, 1157, 1571
GlaI	GCGC	2 cut(s)	841, 917
GluI	GCNGC	8 cut(s)	400, 528, 843, 1013, 1526, 1548, 2092, 2191
GsaI	CCCAGC	2 cut(s)	351, 571
GsuI	CTGGAG	3 cut(s)	1217, 1505, 1745
HaeIII	GGCC	4 cut(s)	521, 579, 972, 1955
HapII	CCGG	2 cut(s)	218, 1489
HgaI	GACGC	2 cut(s)	1040, 1673
HhaI	GCGC	2 cut(s)	842, 918
Hin1I	GRCGYC	1 cut(s)	1032
Hin6I	GCGC	2 cut(s)	840, 916
HinP1I	GCGC	2 cut(s)	840, 916
HindIII	AAGCTT	1 cut(s)	1916
HinfI	GANTC	9 cut(s)	293, 363, 712, 985, 1075, 1628, 1718, 1978, 2116
HpaII	CCGG	2 cut(s)	218, 1489
HphI	GGTGA	5 cut(s)	363, 449, 844, 1450, 1471
Hpy166II	GTNNAC	1 cut(s)	159
Hpy188I	TCNGA	6 cut(s)	315, 455, 895, 1225, 1230, 2015
Hpy8I	GTNNAC	1 cut(s)	159
Hpy99I	CGWCG	1 cut(s)	362
HpyAV	CCTTC	8 cut(s)	310, 334, 646, 1021, 1295, 1445, 2035, 2036
HpyCH4III	ACNGT	8 cut(s)	68, 113, 1384, 1843, 1869, 2053, 2153, 2198
HpyCH4IV	ACGT	2 cut(s)	773, 1996
HpyF10VI	GCNNNNNNNGC	7 cut(s)	518, 527, 533, 833, 842, 2145, 2187
HpyF3I	CTNAG	7 cut(s)	264, 507, 846, 977, 1016, 1320, 1990
HpySE526I	ACGT	2 cut(s)	773, 1996
Hsp92I	GRCGYC	1 cut(s)	1032
HspAI	GCGC	2 cut(s)	840, 916
Kpn2I	TCCGGA	2 cut(s)	217, 1488
LmnI	GCTCC	1 cut(s)	1581
Lsp1109I	GCAGC	6 cut(s)	386, 999, 1534, 1537, 2078, 2177
LweI	GCATC	4 cut(s)	360, 941, 1338, 2175
MaeI	CTAG	6 cut(s)	81, 524, 864, 965, 1157, 1571
MaeII	ACGT	2 cut(s)	773, 1996
MaeIII	GTNAC	7 cut(s)	584, 709, 850, 1843, 1900, 1939, 1968
MboII	GAAGA	7 cut(s)	194, 452, 960, 971, 1310, 1357, 1368
MfeI	CAATTG	1 cut(s)	828
MflI	RGATCY	5 cut(s)	405, 763, 927, 1284, 1961
MlsI	TGGCCA	1 cut(s)	579
MluNI	TGGCCA	1 cut(s)	579
MlyI	GAGTC	3 cut(s)	706, 1637, 1712
MmeI	TCCRAC	2 cut(s)	962, 1788
Mox20I	TGGCCA	1 cut(s)	579
MroI	TCCGGA	2 cut(s)	217, 1488
MroXI	GAANNNNTTC	1 cut(s)	211
MscI	TGGCCA	1 cut(s)	579
MseI	TTAA	5 cut(s)	276, 387, 903, 1065, 1134
MslI	CAYNNNNRTG	1 cut(s)	376
Msp20I	TGGCCA	1 cut(s)	579
MspCI	CTTAAG	1 cut(s)	386
MspI	CCGG	2 cut(s)	218, 1489
MspR9I	CCNGG	3 cut(s)	662, 1196, 1958
MunI	CAATTG	1 cut(s)	828
Mva1269I	GAATGC	3 cut(s)	211, 381, 2009
MvaI	CCWGG	3 cut(s)	662, 1196, 1958
MvnI	CGCG	1 cut(s)	842
MwoI	GCNNNNNNNGC	7 cut(s)	518, 527, 533, 833, 842, 2145, 2187
NcoI	CCATGG	3 cut(s)	497, 1352, 2157
NdeI	CATATG	1 cut(s)	334
NlaIV	GGNNCC	5 cut(s)	14, 345, 560, 1286, 1446
NmeAIII	GCCGAG	1 cut(s)	1745
NmuCI	GTSAC	5 cut(s)	709, 850, 1843, 1939, 1968
NspI	RCATGY	2 cut(s)	284, 417
NspV	TTCGAA	1 cut(s)	1976
OliI	CACNNNNGTG	1 cut(s)	376
PaeI	GCATGC	1 cut(s)	284
PagI	TCATGA	2 cut(s)	133, 198
PasI	CCCWGGG	1 cut(s)	1957
PciI	ACATGT	1 cut(s)	413
PctI	GAATGC	3 cut(s)	211, 381, 2009
PdmI	GAANNNNTTC	1 cut(s)	211
PfeI	GAWTC	6 cut(s)	293, 363, 985, 1075, 1978, 2116
PkrI	GCNGC	8 cut(s)	401, 529, 844, 1014, 1527, 1549, 2093, 2192
PleI	GAGTC	3 cut(s)	706, 1636, 1712
PpsI	GAGTC	3 cut(s)	706, 1636, 1712
Ppu21I	YACGTR	1 cut(s)	1997
PpuMI	RGGWCCY	1 cut(s)	343
PscI	ACATGT	1 cut(s)	413
PsiI	TTATAA	1 cut(s)	1922
Psp1406I	AACGTT	1 cut(s)	773
Psp5II	RGGWCCY	1 cut(s)	343
Psp6I	CCWGG	3 cut(s)	660, 1194, 1956
PspEI	GGTNACC	2 cut(s)	850, 1900
PspFI	CCCAGC	2 cut(s)	347, 567
PspGI	CCWGG	3 cut(s)	660, 1194, 1956
PspN4I	GGNNCC	5 cut(s)	14, 345, 560, 1286, 1446
PspPI	GGNCC	5 cut(s)	343, 520, 1410, 1444, 1954
PspPPI	RGGWCCY	1 cut(s)	343
PstI	CTGCAG	1 cut(s)	787
PsuI	RGATCY	5 cut(s)	405, 763, 927, 1284, 1961
RseI	CAYNNNNRTG	1 cut(s)	376
SaqAI	TTAA	5 cut(s)	276, 387, 903, 1065, 1134
SatI	GCNGC	8 cut(s)	400, 528, 843, 1013, 1526, 1548, 2092, 2191
Sau96I	GGNCC	5 cut(s)	343, 520, 1410, 1444, 1954
ScaI	AGTACT	3 cut(s)	70, 115, 672
SchI	GAGTC	3 cut(s)	706, 1637, 1712
ScrFI	CCNGG	3 cut(s)	662, 1196, 1958
SfaNI	GCATC	4 cut(s)	360, 941, 1338, 2175
SfcI	CTRYAG	2 cut(s)	783, 1542
SfuI	TTCGAA	1 cut(s)	1976
SinI	GGWCC	3 cut(s)	343, 1410, 1444
SmiMI	CAYNNNNRTG	1 cut(s)	376
SmlI	CTYRAG	2 cut(s)	386, 1397
SmoI	CTYRAG	2 cut(s)	386, 1397
SnaBI	TACGTA	1 cut(s)	1997
SpeI	ACTAGT	2 cut(s)	80, 863
SphI	GCATGC	1 cut(s)	284
SsiI	CCGC	3 cut(s)	527, 842, 1614
SspMI	CTAG	6 cut(s)	81, 524, 864, 965, 1157, 1571
StyD4I	CCNGG	3 cut(s)	660, 1194, 1956
StyI	CCWWGG	5 cut(s)	497, 1352, 1434, 1906, 2157
TaaI	ACNGT	8 cut(s)	68, 113, 1384, 1843, 1869, 2053, 2153, 2198
TaiI	ACGT	2 cut(s)	776, 1999
TaqI	TCGA	7 cut(s)	296, 1190, 1296, 1343, 1697, 1825, 1976
TatI	WGTACW	4 cut(s)	59, 68, 113, 670
TauI	GCSGC	2 cut(s)	530, 845
TfiI	GAWTC	6 cut(s)	293, 363, 985, 1075, 1978, 2116
Tru1I	TTAA	5 cut(s)	276, 387, 903, 1065, 1134
Tru9I	TTAA	5 cut(s)	276, 387, 903, 1065, 1134
TscAI	CASTG	6 cut(s)	235, 268, 519, 609, 1728, 1933
TseFI	GTSAC	5 cut(s)	709, 850, 1843, 1939, 1968
TseI	GCWGC	6 cut(s)	399, 1012, 1525, 1547, 2091, 2190
Tsp45I	GTSAC	5 cut(s)	709, 850, 1843, 1939, 1968
TspGWI	ACGGA	2 cut(s)	375, 1070
TspRI	CASTG	6 cut(s)	235, 268, 519, 609, 1728, 1933
Vha464I	CTTAAG	1 cut(s)	386
VpaK11BI	GGWCC	3 cut(s)	343, 1410, 1444
XagI	CCTNNNNNAGG	2 cut(s)	1160, 1400
XapI	RAATTY	4 cut(s)	444, 1248, 1505, 2096
XbaI	TCTAGA	1 cut(s)	1570
XceI	RCATGY	2 cut(s)	284, 417
XmnI	GAANNNNTTC	1 cut(s)	211
XspI	CTAG	6 cut(s)	81, 524, 864, 965, 1157, 1571
ZrmI	AGTACT	3 cut(s)	70, 115, 672

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.