Sieve element occlusion
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0389961 RchiOBHm_Chr4g0400271 RchiOBHm_Chr4g0400571 |
| rosa_laevigata | RLG00000009943 |
| rosa_multiflora | Rmu_sc0003687.1_g000008 Rmu_sc0004336.1_g000023 Rmu_sc0005451.1_g000008 Rmu_ssc0000245.1_g000002 |
| rosa_roxburghii | Rroxscaffold_5G00336110 Rroxscaffold_5G00345410 |
| rosa_rugosa | Rorug03G0327600 Rorug04G0024500 |
| rosa_samantha | Rh4AG030800 Rh4AG102000 Rh4BG024200 Rh4BG097700 Rh4CG033300 Rh4CG110100 Rh4DG024300 |
| rosa_wichuraiana | Rw4G002340 Rw4G002380 Rw4G008280 Rw4G008290 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1411 |
| AccB1I | GGYRCC | 1 cut(s) | 261 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1747 |
| AccI | GTMKAC | 1 cut(s) | 1767 |
| AccIII | TCCGGA | 1 cut(s) | 1116 |
| AciI | CCGC | 2 cut(s) | 230, 1162 |
| AclWI | GGATC | 7 cut(s) | 447, 562, 901, 914, 970, 1108, 1280 |
| AcoI | YGGCCR | 2 cut(s) | 24, 280 |
| AcsI | RAATTY | 4 cut(s) | 147, 869, 1319, 1643 |
| AcuI | CTGAAG | 2 cut(s) | 38, 338 |
| AfaI | GTAC | 4 cut(s) | 327, 375, 980, 1469 |
| AfeI | AGCGCT | 1 cut(s) | 1024 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 201, 916, 1747 |
| AflII | CTTAAG | 3 cut(s) | 89, 377, 572 |
| AflIII | ACRYGT | 1 cut(s) | 1596 |
| AgeI | ACCGGT | 1 cut(s) | 1032 |
| AgsI | TTSAA | 4 cut(s) | 813, 1002, 1195, 1282 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1036 |
| AjnI | CCWGG | 3 cut(s) | 1369, 1587, 1783 |
| AluBI | AGCT | 9 cut(s) | 66, 187, 274, 382, 718, 1498, 1549, 1632, 1652 |
| AluI | AGCT | 9 cut(s) | 66, 187, 274, 382, 718, 1498, 1549, 1632, 1652 |
| Alw21I | GWGCWC | 1 cut(s) | 86 |
| Alw26I | GTCTC | 2 cut(s) | 246, 1397 |
| Alw44I | GTGCAC | 1 cut(s) | 82 |
| AlwI | GGATC | 7 cut(s) | 447, 562, 901, 914, 970, 1108, 1280 |
| Aor13HI | TCCGGA | 1 cut(s) | 1116 |
| Aor51HI | AGCGCT | 1 cut(s) | 1024 |
| AoxI | GGCC | 3 cut(s) | 24, 222, 280 |
| ApaLI | GTGCAC | 1 cut(s) | 82 |
| ApeKI | GCWGC | 3 cut(s) | 102, 1683, 1776 |
| ApoI | RAATTY | 4 cut(s) | 147, 869, 1319, 1643 |
| AsiGI | ACCGGT | 1 cut(s) | 1032 |
| AspLEI | GCGC | 2 cut(s) | 1025, 1084 |
| AspS9I | GGNCC | 4 cut(s) | 46, 223, 985, 1585 |
| AsuC2I | CCSGG | 1 cut(s) | 1701 |
| AsuHPI | GGTGA | 4 cut(s) | 152, 289, 1078, 1659 |
| AvaII | GGWCC | 3 cut(s) | 46, 985, 1585 |
| BaeGI | GKGCMC | 1 cut(s) | 86 |
| BalI | TGGCCA | 1 cut(s) | 282 |
| BamHI | GGATCC | 1 cut(s) | 906 |
| BanI | GGYRCC | 1 cut(s) | 261 |
| BanII | GRGCYC | 1 cut(s) | 1076 |
| BbsI | GAAGAC | 1 cut(s) | 939 |
| Bbv12I | GWGCWC | 1 cut(s) | 86 |
| BbvCI | CCTCAGC | 1 cut(s) | 1019 |
| BbvI | GCAGC | 3 cut(s) | 89, 1670, 1763 |
| BccI | CCATC | 6 cut(s) | 161, 396, 704, 1319, 1749, 1763 |
| BceAI | ACGGC | 1 cut(s) | 1645 |
| BciT130I | CCWGG | 3 cut(s) | 1371, 1589, 1785 |
| BciVI | GTATCC | 1 cut(s) | 509 |
| BclI | TGATCA | 3 cut(s) | 1008, 1141, 1447 |
| BcnI | CCSGG | 1 cut(s) | 1701 |
| BcoDI | GTCTC | 2 cut(s) | 246, 1397 |
| BfaI | CTAG | 3 cut(s) | 227, 605, 1801 |
| BfoI | RGCGCY | 1 cut(s) | 1026 |
| BfrI | CTTAAG | 3 cut(s) | 89, 377, 572 |
| BfuI | GTATCC | 1 cut(s) | 509 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 230 |
| BisI | GCNGC | 4 cut(s) | 103, 231, 1684, 1777 |
| BlsI | GCNGC | 4 cut(s) | 104, 232, 1685, 1778 |
| BmcAI | AGTACT | 1 cut(s) | 375 |
| Bme1390I | CCNGG | 4 cut(s) | 1371, 1589, 1701, 1785 |
| Bme18I | GGWCC | 3 cut(s) | 46, 985, 1585 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1036 |
| BmgT120I | GGNCC | 4 cut(s) | 46, 223, 985, 1585 |
| BmiI | GGNNCC | 3 cut(s) | 48, 263, 908 |
| BmrFI | CCNGG | 4 cut(s) | 1371, 1589, 1701, 1785 |
| BmsI | GCATC | 1 cut(s) | 960 |
| BpiI | GAAGAC | 1 cut(s) | 939 |
| BpmI | CTGGAG | 1 cut(s) | 584 |
| Bpu10I | CCTNAGC | 2 cut(s) | 210, 1019 |
| BpuMI | CCSGG | 1 cut(s) | 1701 |
| BsaI | GGTCTC | 1 cut(s) | 1397 |
| BsaJI | CCNNGG | 8 cut(s) | 161, 200, 351, 974, 1588, 1661, 1746, 1783 |
| BsaWI | WCCGGW | 2 cut(s) | 1032, 1116 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 743, 773 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 201, 916, 1747 |
| Bse118I | RCCGGY | 1 cut(s) | 1032 |
| Bse1I | ACTGG | 4 cut(s) | 312, 567, 988, 1557 |
| BseAI | TCCGGA | 1 cut(s) | 1116 |
| BseBI | CCWGG | 3 cut(s) | 1371, 1589, 1785 |
| BseDI | CCNNGG | 8 cut(s) | 161, 200, 351, 974, 1588, 1661, 1746, 1783 |
| BseGI | GGATG | 3 cut(s) | 153, 712, 1741 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 201, 916, 1747 |
| BseMII | CTCAG | 1 cut(s) | 1033 |
| BseNI | ACTGG | 4 cut(s) | 312, 567, 988, 1557 |
| BseRI | GAGGAG | 2 cut(s) | 764, 968 |
| BseSI | GKGCMC | 1 cut(s) | 86 |
| BseXI | GCAGC | 3 cut(s) | 89, 1670, 1763 |
| BseYI | CCCAGC | 1 cut(s) | 270 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1033 |
| BshFI | GGCC | 3 cut(s) | 26, 224, 282 |
| BshNI | GGYRCC | 1 cut(s) | 261 |
| BshTI | ACCGGT | 1 cut(s) | 1032 |
| BsiEI | CGRYCG | 1 cut(s) | 1033 |
| BsiHKAI | GWGCWC | 1 cut(s) | 86 |
| BsiSI | CCGG | 3 cut(s) | 1033, 1117, 1701 |
| BslFI | GGGAC | 2 cut(s) | 32, 218 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 201, 916, 1747 |
| BsmAI | GTCTC | 2 cut(s) | 246, 1397 |
| BsmFI | GGGAC | 2 cut(s) | 32, 218 |
| BsmI | GAATGC | 1 cut(s) | 1685 |
| BsnI | GGCC | 3 cut(s) | 26, 224, 282 |
| Bso31I | GGTCTC | 1 cut(s) | 1397 |
| Bsp1286I | GDGCHC | 2 cut(s) | 86, 1076 |
| Bsp13I | TCCGGA | 1 cut(s) | 1116 |
| Bsp19I | CCATGG | 3 cut(s) | 200, 974, 1746 |
| BspACI | CCGC | 2 cut(s) | 230, 1162 |
| BspANI | GGCC | 3 cut(s) | 26, 224, 282 |
| BspCNI | CTCAG | 1 cut(s) | 1032 |
| BspEI | TCCGGA | 1 cut(s) | 1116 |
| BspHI | TCATGA | 2 cut(s) | 672, 1399 |
| BspLI | GGNNCC | 3 cut(s) | 48, 263, 908 |
| BspPI | GGATC | 7 cut(s) | 447, 562, 901, 914, 970, 1108, 1280 |
| BspT107I | GGYRCC | 1 cut(s) | 261 |
| BspTI | CTTAAG | 3 cut(s) | 89, 377, 572 |
| BspTNI | GGTCTC | 1 cut(s) | 1397 |
| BsrFI | RCCGGY | 1 cut(s) | 1032 |
| BsrI | ACTGG | 4 cut(s) | 312, 567, 988, 1557 |
| BssAI | RCCGGY | 1 cut(s) | 1032 |
| BssECI | CCNNGG | 8 cut(s) | 161, 200, 351, 974, 1588, 1661, 1746, 1783 |
| BssT1I | CCWWGG | 5 cut(s) | 161, 200, 351, 974, 1746 |
| Bst2UI | CCWGG | 3 cut(s) | 1371, 1589, 1785 |
| Bst4CI | ACNGT | 2 cut(s) | 1503, 1605 |
| BstAFI | CTTAAG | 3 cut(s) | 89, 377, 572 |
| BstC8I | GCNNGC | 2 cut(s) | 222, 345 |
| BstDEI | CTNAG | 3 cut(s) | 210, 1019, 1165 |
| BstDSI | CCRYGG | 4 cut(s) | 200, 974, 1661, 1746 |
| BstEII | GGTNACC | 1 cut(s) | 1665 |
| BstF5I | GGATG | 3 cut(s) | 153, 712, 1741 |
| BstH2I | RGCGCY | 1 cut(s) | 1026 |
| BstHHI | GCGC | 2 cut(s) | 1025, 1084 |
| BstMAI | GTCTC | 2 cut(s) | 246, 1397 |
| BstMCI | CGRYCG | 1 cut(s) | 1033 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 221, 230, 236, 1734 |
| BstNI | CCWGG | 3 cut(s) | 1371, 1589, 1785 |
| BstNSI | RCATGY | 2 cut(s) | 347, 1600 |
| BstPI | GGTNACC | 1 cut(s) | 1665 |
| BstSCI | CCNGG | 4 cut(s) | 1369, 1587, 1699, 1783 |
| BstSLI | GKGCMC | 1 cut(s) | 86 |
| BstV1I | GCAGC | 3 cut(s) | 89, 1670, 1763 |
| BstV2I | GAAGAC | 1 cut(s) | 939 |
| BstX2I | RGATCY | 3 cut(s) | 439, 567, 906 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 278, 307, 1720 |
| BstYI | RGATCY | 3 cut(s) | 439, 567, 906 |
| BsuI | GTATCC | 1 cut(s) | 509 |
| BsuRI | GGCC | 3 cut(s) | 26, 224, 282 |
| BtgI | CCRYGG | 4 cut(s) | 200, 974, 1661, 1746 |
| BtsCI | GGATG | 3 cut(s) | 153, 712, 1741 |
| BtsI | GCAGTG | 2 cut(s) | 222, 748 |
| BtsIMutI | CAGTG | 4 cut(s) | 222, 305, 748, 1610 |
| Cac8I | GCNNGC | 2 cut(s) | 222, 345 |
| CciI | TCATGA | 2 cut(s) | 672, 1399 |
| CfoI | GCGC | 2 cut(s) | 1025, 1084 |
| Cfr10I | RCCGGY | 1 cut(s) | 1032 |
| Cfr13I | GGNCC | 4 cut(s) | 46, 223, 985, 1585 |
| CseI | GACGC | 1 cut(s) | 215 |
| Csp6I | GTAC | 4 cut(s) | 326, 374, 979, 1468 |
| CspAI | ACCGGT | 1 cut(s) | 1032 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 492, 527, 1561, 1596 |
| CviQI | GTAC | 4 cut(s) | 326, 374, 979, 1468 |
| DdeI | CTNAG | 3 cut(s) | 210, 1019, 1165 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1411 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1036 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1411 |
| EaeI | YGGCCR | 2 cut(s) | 24, 280 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1036 |
| Eco130I | CCWWGG | 5 cut(s) | 161, 200, 351, 974, 1746 |
| Eco24I | GRGCYC | 1 cut(s) | 1076 |
| Eco31I | GGTCTC | 1 cut(s) | 1397 |
| Eco47I | GGWCC | 3 cut(s) | 46, 985, 1585 |
| Eco47III | AGCGCT | 1 cut(s) | 1024 |
| Eco57I | CTGAAG | 2 cut(s) | 38, 338 |
| Eco91I | GGTNACC | 1 cut(s) | 1665 |
| EcoO109I | RGGNCCY | 2 cut(s) | 46, 1585 |
| EcoO65I | GGTNACC | 1 cut(s) | 1665 |
| EcoRI | GAATTC | 1 cut(s) | 1319 |
| EcoRII | CCWGG | 3 cut(s) | 1369, 1587, 1783 |
| EcoT14I | CCWWGG | 5 cut(s) | 161, 200, 351, 974, 1746 |
| EcoT38I | GRGCYC | 1 cut(s) | 1076 |
| ErhI | CCWWGG | 5 cut(s) | 161, 200, 351, 974, 1746 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1473, 1505 |
| FaqI | GGGAC | 2 cut(s) | 32, 218 |
| FauI | CCCGC | 1 cut(s) | 1169 |
| FbaI | TGATCA | 3 cut(s) | 1008, 1141, 1447 |
| FblI | GTMKAC | 1 cut(s) | 1767 |
| Fnu4HI | GCNGC | 4 cut(s) | 103, 231, 1684, 1777 |
| FokI | GGATG | 3 cut(s) | 140, 719, 1728 |
| FriOI | GRGCYC | 1 cut(s) | 1076 |
| Fsp4HI | GCNGC | 4 cut(s) | 103, 231, 1684, 1777 |
| FspBI | CTAG | 3 cut(s) | 227, 605, 1801 |
| GlaI | GCGC | 2 cut(s) | 1024, 1083 |
| GluI | GCNGC | 4 cut(s) | 103, 231, 1684, 1777 |
| GsaI | CCCAGC | 1 cut(s) | 274 |
| GsuI | CTGGAG | 1 cut(s) | 584 |
| HaeII | RGCGCY | 1 cut(s) | 1026 |
| HaeIII | GGCC | 3 cut(s) | 26, 224, 282 |
| HapII | CCGG | 3 cut(s) | 1033, 1117, 1701 |
| HgaI | GACGC | 1 cut(s) | 215 |
| HhaI | GCGC | 2 cut(s) | 1025, 1084 |
| Hin6I | GCGC | 2 cut(s) | 1023, 1082 |
| HinP1I | GCGC | 2 cut(s) | 1023, 1082 |
| HinfI | GANTC | 4 cut(s) | 694, 1128, 1265, 1379 |
| HpaII | CCGG | 3 cut(s) | 1033, 1117, 1701 |
| HphI | GGTGA | 4 cut(s) | 152, 289, 1078, 1659 |
| Hpy166II | GTNNAC | 4 cut(s) | 84, 451, 1303, 1768 |
| Hpy188I | TCNGA | 9 cut(s) | 18, 649, 669, 763, 852, 967, 1056, 1393, 1678 |
| Hpy188III | TCNNGA | 8 cut(s) | 316, 637, 673, 775, 1117, 1154, 1400, 1477 |
| Hpy8I | GTNNAC | 4 cut(s) | 84, 451, 1303, 1768 |
| HpyAV | CCTTC | 3 cut(s) | 37, 1288, 1683 |
| HpyCH4III | ACNGT | 2 cut(s) | 1503, 1605 |
| HpyCH4V | TGCA | 4 cut(s) | 84, 409, 1090, 1239 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 221, 230, 236, 1734 |
| HpyF3I | CTNAG | 3 cut(s) | 210, 1019, 1165 |
| HspAI | GCGC | 2 cut(s) | 1023, 1082 |
| Kpn2I | TCCGGA | 1 cut(s) | 1116 |
| Ksp22I | TGATCA | 3 cut(s) | 1008, 1141, 1447 |
| Lsp1109I | GCAGC | 3 cut(s) | 89, 1670, 1763 |
| LweI | GCATC | 1 cut(s) | 960 |
| MaeI | CTAG | 3 cut(s) | 227, 605, 1801 |
| MaeIII | GTNAC | 6 cut(s) | 287, 412, 541, 1353, 1599, 1665 |
| MboII | GAAGA | 7 cut(s) | 155, 932, 944, 990, 1207, 1214, 1237 |
| MflI | RGATCY | 3 cut(s) | 439, 567, 906 |
| MhlI | GDGCHC | 2 cut(s) | 86, 1076 |
| MlsI | TGGCCA | 1 cut(s) | 282 |
| MluNI | TGGCCA | 1 cut(s) | 282 |
| MlyI | GAGTC | 1 cut(s) | 1274 |
| MmeI | TCCRAC | 3 cut(s) | 181, 459, 627 |
| Mox20I | TGGCCA | 1 cut(s) | 282 |
| MroI | TCCGGA | 1 cut(s) | 1116 |
| MscI | TGGCCA | 1 cut(s) | 282 |
| MseI | TTAA | 7 cut(s) | 90, 378, 573, 614, 684, 756, 1340 |
| Msp20I | TGGCCA | 1 cut(s) | 282 |
| MspCI | CTTAAG | 3 cut(s) | 89, 377, 572 |
| MspI | CCGG | 3 cut(s) | 1033, 1117, 1701 |
| MspR9I | CCNGG | 4 cut(s) | 1371, 1589, 1701, 1785 |
| Mva1269I | GAATGC | 1 cut(s) | 1685 |
| MvaI | CCWGG | 3 cut(s) | 1371, 1589, 1785 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 221, 230, 236, 1734 |
| NciI | CCSGG | 1 cut(s) | 1701 |
| NcoI | CCATGG | 3 cut(s) | 200, 974, 1746 |
| NlaIV | GGNNCC | 3 cut(s) | 48, 263, 908 |
| NmuCI | GTSAC | 3 cut(s) | 412, 1599, 1665 |
| NspI | RCATGY | 2 cut(s) | 347, 1600 |
| PaeI | GCATGC | 1 cut(s) | 347 |
| PagI | TCATGA | 2 cut(s) | 672, 1399 |
| PciI | ACATGT | 1 cut(s) | 1596 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1482 |
| PctI | GAATGC | 1 cut(s) | 1685 |
| PfeI | GAWTC | 3 cut(s) | 694, 1128, 1379 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1747 |
| PfoI | TCCNGGA | 1 cut(s) | 1699 |
| PinAI | ACCGGT | 1 cut(s) | 1032 |
| PkrI | GCNGC | 4 cut(s) | 104, 232, 1685, 1778 |
| PleI | GAGTC | 1 cut(s) | 1273 |
| PpsI | GAGTC | 1 cut(s) | 1273 |
| PpuMI | RGGWCCY | 2 cut(s) | 46, 1585 |
| PscI | ACATGT | 1 cut(s) | 1596 |
| Psp5II | RGGWCCY | 2 cut(s) | 46, 1585 |
| Psp6I | CCWGG | 3 cut(s) | 1369, 1587, 1783 |
| PspEI | GGTNACC | 1 cut(s) | 1665 |
| PspFI | CCCAGC | 1 cut(s) | 270 |
| PspGI | CCWGG | 3 cut(s) | 1369, 1587, 1783 |
| PspN4I | GGNNCC | 3 cut(s) | 48, 263, 908 |
| PspPI | GGNCC | 4 cut(s) | 46, 223, 985, 1585 |
| PspPPI | RGGWCCY | 2 cut(s) | 46, 1585 |
| PsuI | RGATCY | 3 cut(s) | 439, 567, 906 |
| RsaI | GTAC | 4 cut(s) | 327, 375, 980, 1469 |
| RsaNI | GTAC | 4 cut(s) | 326, 374, 979, 1468 |
| SaqAI | TTAA | 7 cut(s) | 90, 378, 573, 614, 684, 756, 1340 |
| SatI | GCNGC | 4 cut(s) | 103, 231, 1684, 1777 |
| Sau96I | GGNCC | 4 cut(s) | 46, 223, 985, 1585 |
| ScaI | AGTACT | 1 cut(s) | 375 |
| SchI | GAGTC | 1 cut(s) | 1274 |
| ScrFI | CCNGG | 4 cut(s) | 1371, 1589, 1701, 1785 |
| SduI | GDGCHC | 2 cut(s) | 86, 1076 |
| SfaNI | GCATC | 1 cut(s) | 960 |
| SinI | GGWCC | 3 cut(s) | 46, 985, 1585 |
| SmlI | CTYRAG | 3 cut(s) | 89, 377, 572 |
| SmoI | CTYRAG | 3 cut(s) | 89, 377, 572 |
| SphI | GCATGC | 1 cut(s) | 347 |
| SsiI | CCGC | 2 cut(s) | 230, 1162 |
| SspI | AATATT | 2 cut(s) | 768, 1578 |
| SspMI | CTAG | 3 cut(s) | 227, 605, 1801 |
| StyD4I | CCNGG | 4 cut(s) | 1369, 1587, 1699, 1783 |
| StyI | CCWWGG | 5 cut(s) | 161, 200, 351, 974, 1746 |
| TaaI | ACNGT | 2 cut(s) | 1503, 1605 |
| TaqI | TCGA | 6 cut(s) | 6, 552, 747, 774, 1107, 1217 |
| TatI | WGTACW | 2 cut(s) | 373, 1467 |
| TauI | GCSGC | 1 cut(s) | 233 |
| TfiI | GAWTC | 3 cut(s) | 694, 1128, 1379 |
| Tru1I | TTAA | 7 cut(s) | 90, 378, 573, 614, 684, 756, 1340 |
| Tru9I | TTAA | 7 cut(s) | 90, 378, 573, 614, 684, 756, 1340 |
| TscAI | CASTG | 4 cut(s) | 222, 312, 748, 1610 |
| TseFI | GTSAC | 3 cut(s) | 412, 1599, 1665 |
| TseI | GCWGC | 3 cut(s) | 102, 1683, 1776 |
| Tsp45I | GTSAC | 3 cut(s) | 412, 1599, 1665 |
| TspDTI | ATGAA | 5 cut(s) | 58, 600, 689, 882, 1611 |
| TspGWI | ACGGA | 3 cut(s) | 182, 264, 944 |
| TspRI | CASTG | 4 cut(s) | 222, 312, 748, 1610 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1747 |
| Vha464I | CTTAAG | 3 cut(s) | 89, 377, 572 |
| VneI | GTGCAC | 1 cut(s) | 82 |
| VpaK11BI | GGWCC | 3 cut(s) | 46, 985, 1585 |
| XapI | RAATTY | 4 cut(s) | 147, 869, 1319, 1643 |
| XceI | RCATGY | 2 cut(s) | 347, 1600 |
| XmiI | GTMKAC | 1 cut(s) | 1767 |
| XspI | CTAG | 3 cut(s) | 227, 605, 1801 |
| ZrmI | AGTACT | 1 cut(s) | 375 |