Rroxscaffold_5G00372570

N-terminal C2 in EEIG1 and EHBP1 proteins

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0003470
Physical Location & Seq
Reverse (-)
53991548 .. 53997499
5952 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00372570.1

Sequence Viewer

Length: 3075 bp
ATGGTGCTTGGGATAAGAGCAAAGAGCCGGAAGAGTGCTGCGGTTGAGGTTGATTATGTTATACATGTGCTGGAAATTAAACCATGGCCCTCGTCTCAGGCTTTGAAATCTGTTGAGTCTGTGTTTCTGCAATGGGGAAATGGTGATCAAGCGTCTGGATCATTCTTTCGTAATGTTGGAGACGAGAAGATTGAATTTGGGGAGTCGTTCAGGCTTCCGGTTGTTTTGTACAAGGAGAAGTCAAGAAAAAGCTCGGCGCGTGACACTTACCAGAAGATCAACTTAGAGTTTCATCTGTCTGCACCTCGAAAGGGCAAGGCAGCTAAACTTTTGGGATCGGCTGTGATAAATCTTGCAGATTATGCAACCATAGTTGAAACCACGAATGTGAGAGTTCCACTGAACTTGAAGAAGAGTTCTAAGAGTTCAGCTCAGCCGGTTCTTTATCTTAATGTTCAGCCTTGTGGTAATGATAGCTCCCACTTGGCCAAACAAGTGTCGCTGGACAACCATGGAAGTCATGGGTCTCTGGATGATGAGATTGCCTCTTTCACTGATGATGATGGTGATGATCAGTCTTCACATTCATCACGTACTGTAACCTCTTCTGCTTTTGAGGTACCAGTCAGTTCATCACCAAGTGCTGACAAGGTATGCGGAGACAAGAATGTGTCAGAATCAACAATTGATAACACTAGAAGGATTTATGAGGAACCAACCGTACATTCAATAGCAGCACCTGCAAGCACTGTTATGAATCCAGTCGCTAATGCATTGAAACATCAAAGTGGAAGTTCATCTCCACTGTCGTCAATAGGCTCTTCCTCCTCTCGGAAACCTGCTTATGATTATATTTCTTTGCCTCACCCTTCAAGGGAGAGATCAGTGCCAACCTTGAAAAAATCTGTGACTCAGTCTGCTCAATCATCTTCTTCATCCTCTGGCTATCAAGATGACCATCAAGAGTCTGGTAATTATAATATTAAGACCAACAGAATTCAGAATAGTCTTATTACCAGAGGTGCCAGAATGCAAGAAAATGCACAAGAATCTACAATGGGCAAAATTGTGAGCAACCATGCTGCTGAAGGTACAACCTCAAGTACGTCTCTGCAGCAGGCTACAAACTCAATATCTGCAAGCTATGCAGATTTAGAATCCCCTCGAGATGATGATCATCTCGTAAAGGTGAATGAATATTCTTTTGATGGCAAATTAGCTTCTAGGTTTTTACAAGATGCTACCAGAAAGCCAGTCACTTTAAAGAGTGAAACTTTTACAGTCAGCAATAATGTTGGATCACGGGAAAGCAAGGTTAAAAGTACTGAATTAAAGCATGTAAAGTCCGTGAAACCTTCTATCTCAGCTGAGACCAATAGTTGGATAAGAAAACATGAGTTTATGAAAAAGTCAAAGGAAGCTGAGATTCCTGAAGATGGTCGTGTTGGTGGTATCATTAGTTCAAAGTGTGAAAGAGAAGAAACAACAACTAGCTGTTCTGATAGTAAAATTGAGCTGGAGTCTACAATTGAAATGCTTAAGGATGAGTTGAGAGAAGCGGCTGCTGTTGAGGTTGGCCTTTACTCCATTGTCGCCGAGCATGGGAGTAACACGAATAAGATCCATGCTCCTGCTCGCCGACTTTCTAGATTCTATTTTCATGCTTGCAAAATGAGATCTCAAGCTAAGAAGGCAAATGCTGCAAGAGCTGCTATTACTGGATTAATTTTGGTTTCTAAAGCTTGTGGAAATGATGTTCCAAGGTTGACTTTCTGGTTGTCGAACTCAATTGTGTTGAGAGCTATTGTCAGCCAGGGCTTAGGGAAAGCTCAAGTTTCAAATGGACCATGCACTACAATTAAAGGTGGCAAACAGTATGCAGCGGATAGGCATTTATCAGCAAAGGATAGGATTCGTACTCGCAATGATGAGAAAGATAACATTCTTGAAAGTTTTGATAATTGGGAGGATCCACATATATTTATGGTTGGTTTGGAAAAGTTTGAAGCTTGGATATTCTCCCGGATAGTTGAGTCTGTATGGTGGCAGAATATAACTCCACATATGCAGTCTGCAGCTGCGAAAGGCTCAAGCACAAGGAAAGCTAATGGAAGAAAGAAAGGTTTGGGTGATCATGAGCAGGGTAATTTTTCCATTGAGCTGTGGACGAAGGCTTTCAAAGATGCCTGTGAAAGGCTTTGTCCTGTTCGAGCTGGTGGCCATGAGTGTGGCTGCTTGCCTCTTCTTGCTCGTTTGGTCATGGAGCAGTTGGTGAGTAGGTTGGATGTGGCTATGTTCAATGCTATTCTTCGTGAAAATGCTGAAGAGATGCCCACAGATCCCGTGTCTGACCCTATAAGTGATTCCAAGGTTCTCCCTATTCCAGCTGGAAAATCAAGTTTTGGGGCAGGTGCACAGCTAAAAAATGCGATTGGAAGCTGGTCCAGATGGCTGACTGATCTATTTGGTATGGATGATACTGATGTTCAAGACGACGAGGATGAACTCAGTGATCACAAGGGGCAGGAGAGTGAAACATCCTTTAAAGCTTTCCGTCTTCTTAATGCTTTGAGTGATCTCATGATGCTTCCATCTGAAATGCTTGCAGATAAATCCACCAGAGAAGAGGTATGCCCTACATTCGGTGCATCAATGATCAAGAGGGTCCTTTACAATTTTGTAACAGATGAGTTTTGCCCAGACCCGATTCCCGAAGCAGTTTTTGAGGCTCTTGACAATGAGGAGAATCTGGAAGCTGAAACAGAATCTGTTACAAGTTTCCCATTTATTGCAAATCCCACAATTTATTCACCACCTCCAGCTGCTGCTTCTCTATCAGGCATTACAGGAGAGGTGGGGAGCCCAGCTCACCTAAGGAGTGGGTCATCAGTGCTTAAGAAATCATATACTAGTGATGATGAGCTTGATGAGTTGGATTCACCGATGACTTCAATCGTAGAAAATTCCCAGGTTTCCCCCAAGTCGTTGACAGCCAACCCAATGCTGAAGTGGAAGGGTGGTCGGAAGGTTGTCCGATATCAACTCCTCCGTCAGGTTTGGAAGGACAGTGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NT-C2

Protein Analysis

1024

Amino Acids

112.24

Weight (kDa)

6.23

Isoelectric Point (pI)

44.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NT-C2 PF10358 12 - 158 8.4e-15 N-terminal C2 in EEIG1 and EHBP1 proteins
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 978
AarI CACCTGC 2 cut(s) 748, 2399
Acc36I ACCTGC 3 cut(s) 748, 847, 2399
Acc65I GGTACC 1 cut(s) 619
AccB1I GGYRCC 2 cut(s) 619, 1022
AccB7I CCANNNNNTGG 1 cut(s) 1380
AccI GTMKAC 1 cut(s) 1523
AccII CGCG 1 cut(s) 259
AciI CCGC 4 cut(s) 41, 657, 1559, 1883
AclWI GGATC 7 cut(s) 166, 343, 1306, 1615, 1964, 1977, 2333
AcoI YGGCCR 2 cut(s) 486, 2218
AcsI RAATTY 3 cut(s) 194, 996, 2962
AcuI CTGAAG 4 cut(s) 1107, 1452, 2343, 3026
AdeI CACNNNGTG 1 cut(s) 641
AfaI GTAC 8 cut(s) 230, 595, 621, 723, 1093, 1105, 1324, 1918
AfiI CCNNNNNNNGG 9 cut(s) 311, 831, 874, 1380, 1436, 1602, 2193, 2642, 3052
AflII CTTAAG 2 cut(s) 1538, 2894
AflIII ACRYGT 1 cut(s) 64
AhlI ACTAGT 1 cut(s) 2909
AjnI CCWGG 2 cut(s) 1812, 2967
AjuI GAANNNNNNNTTGG 2 cut(s) 709, 741
AleI CACNNNNGTG 1 cut(s) 386
AloI GAACNNNNNNTCC 2 cut(s) 1740, 1772
Alw21I GWGCWC 1 cut(s) 2416
Alw26I GTCTC 6 cut(s) 99, 174, 531, 654, 1113, 1364
Alw44I GTGCAC 1 cut(s) 2412
AlwI GGATC 7 cut(s) 166, 343, 1306, 1615, 1964, 1977, 2333
AlwNI CAGNNNCTG 4 cut(s) 740, 2768, 2825, 3072
Ama87I CYCGRG 1 cut(s) 1164
AoxI GGCC 4 cut(s) 86, 486, 1576, 2218
ApaLI GTGCAC 1 cut(s) 2412
ApoI RAATTY 3 cut(s) 194, 996, 2962
AseI ATTAAT 1 cut(s) 1724
Asp700I GAANNNNTTC 1 cut(s) 2174
Asp718I GGTACC 1 cut(s) 619
AspLEI GCGC 1 cut(s) 259
AspS9I GGNCC 4 cut(s) 87, 1844, 2442, 2665
AsuC2I CCSGG 1 cut(s) 2023
AvaI CYCGRG 1 cut(s) 1164
AvaII GGWCC 3 cut(s) 1844, 2442, 2665
AxyI CCTNAGG 1 cut(s) 2873
BaeGI GKGCMC 1 cut(s) 2416
BaeI ACNNNNGTAYC 2 cut(s) 2469, 2502
BalI TGGCCA 2 cut(s) 488, 2220
BamHI GGATCC 1 cut(s) 1969
BanI GGYRCC 2 cut(s) 619, 1022
BanII GRGCYC 1 cut(s) 2864
BbsI GAAGAC 2 cut(s) 570, 2549
Bbv12I GWGCWC 1 cut(s) 2416
BccI CCATC 6 cut(s) 557, 966, 1202, 1430, 2442, 2599
BciT130I CCWGG 2 cut(s) 1814, 2969
BclI TGATCA 6 cut(s) 145, 571, 1174, 2131, 2512, 2655
BcnI CCSGG 1 cut(s) 2023
BcoDI GTCTC 6 cut(s) 99, 174, 531, 654, 1113, 1364
BcuI ACTAGT 1 cut(s) 2909
BfaI CTAG 5 cut(s) 696, 1224, 1491, 1647, 2910
BfmI CTRYAG 2 cut(s) 1112, 2073
BfrI CTTAAG 2 cut(s) 1538, 2894
BfuAI ACCTGC 3 cut(s) 748, 847, 2399
BglII AGATCT 1 cut(s) 1676
BlpI GCTNAGC 1 cut(s) 432
BmcAI AGTACT 1 cut(s) 1324
Bme1390I CCNGG 3 cut(s) 1814, 2023, 2969
Bme18I GGWCC 3 cut(s) 1844, 2442, 2665
BmeT110I CYCGRG 1 cut(s) 1164
BmgT120I GGNCC 4 cut(s) 87, 1844, 2442, 2665
BmiI GGNNCC 6 cut(s) 621, 714, 1024, 1971, 2666, 2861
BmrFI CCNGG 3 cut(s) 1814, 2023, 2969
BmsI GCATC 5 cut(s) 1228, 2173, 2319, 2574, 2657
BpiI GAAGAC 2 cut(s) 570, 2549
BplI GAGNNNNNCTC 6 cut(s) 415, 447, 530, 562, 2851, 2883
BpmI CTGGAG 2 cut(s) 1538, 2802
Bpu10I CCTNAGC 1 cut(s) 1819
Bpu1102I GCTNAGC 1 cut(s) 432
BpuEI CTTGAG 4 cut(s) 1084, 1665, 1815, 2074
BpuMI CCSGG 1 cut(s) 2023
BsaAI YACGTR 1 cut(s) 593
BsaBI GATNNNNATC 3 cut(s) 957, 1173, 1176
BsaI GGTCTC 2 cut(s) 531, 1364
BsaJI CCNNGG 6 cut(s) 83, 511, 1760, 1813, 2367, 2967
BsaWI WCCGGW 1 cut(s) 217
Bsc4I CCNNNNNNNGG 9 cut(s) 311, 831, 874, 1380, 1436, 1602, 2193, 2642, 3052
Bse118I RCCGGY 1 cut(s) 436
Bse1I ACTGG 4 cut(s) 623, 761, 1253, 1723
Bse21I CCTNAGG 1 cut(s) 2873
Bse3DI GCAATG 2 cut(s) 137, 1930
Bse8I GATNNNNATC 3 cut(s) 957, 1173, 1176
BseBI CCWGG 2 cut(s) 1814, 2969
BseDI CCNNGG 6 cut(s) 83, 511, 1760, 1813, 2367, 2967
BseGI GGATG 7 cut(s) 538, 935, 1549, 2290, 2479, 2506, 2537
BseJI GATNNNNATC 3 cut(s) 957, 1173, 1176
BseLI CCNNNNNNNGG 9 cut(s) 311, 831, 874, 1380, 1436, 1602, 2193, 2642, 3052
BseMI GCAATG 2 cut(s) 137, 1930
BseMII CTCAG 7 cut(s) 110, 446, 926, 1359, 1377, 1413, 2521
BseNI ACTGG 4 cut(s) 623, 761, 1253, 1723
BseRI GAGGAG 3 cut(s) 817, 2756, 3035
BseSI GKGCMC 1 cut(s) 2416
BseYI CCCAGC 1 cut(s) 2863
BsgI GTGCAG 1 cut(s) 285
Bsh1236I CGCG 1 cut(s) 259
BshFI GGCC 4 cut(s) 88, 488, 1578, 2220
BshNI GGYRCC 2 cut(s) 619, 1022
BsiHKAI GWGCWC 1 cut(s) 2416
BsiHKCI CYCGRG 1 cut(s) 1164
BsiSI CCGG 4 cut(s) 28, 218, 437, 2023
BslI CCNNNNNNNGG 9 cut(s) 311, 831, 874, 1380, 1436, 1602, 2193, 2642, 3052
BsmAI GTCTC 6 cut(s) 99, 174, 531, 654, 1113, 1364
BsmBI CGTCTC 3 cut(s) 99, 174, 1113
BsmI GAATGC 1 cut(s) 1035
BsnI GGCC 4 cut(s) 88, 488, 1578, 2220
Bso31I GGTCTC 2 cut(s) 531, 1364
BsoBI CYCGRG 1 cut(s) 1164
Bsp1286I GDGCHC 2 cut(s) 2416, 2864
Bsp1407I TGTACA 1 cut(s) 228
Bsp1720I GCTNAGC 1 cut(s) 432
Bsp19I CCATGG 2 cut(s) 83, 511
BspACI CCGC 4 cut(s) 41, 657, 1559, 1883
BspANI GGCC 4 cut(s) 88, 488, 1578, 2220
BspCNI CTCAG 7 cut(s) 109, 445, 925, 1360, 1376, 1414, 2520
BspFNI CGCG 1 cut(s) 259
BspHI TCATGA 2 cut(s) 2134, 2580
BspLI GGNNCC 6 cut(s) 621, 714, 1024, 1971, 2666, 2861
BspMAI CTGCAG 2 cut(s) 1116, 2077
BspMI ACCTGC 3 cut(s) 748, 847, 2399
BspPI GGATC 7 cut(s) 166, 343, 1306, 1615, 1964, 1977, 2333
BspQI GCTCTTC 1 cut(s) 826
BspT107I GGYRCC 2 cut(s) 619, 1022
BspTI CTTAAG 2 cut(s) 1538, 2894
BspTNI GGTCTC 2 cut(s) 531, 1364
BsrDI GCAATG 2 cut(s) 137, 1930
BsrFI RCCGGY 1 cut(s) 436
BsrGI TGTACA 1 cut(s) 228
BsrI ACTGG 4 cut(s) 623, 761, 1253, 1723
BssAI RCCGGY 1 cut(s) 436
BssECI CCNNGG 6 cut(s) 83, 511, 1760, 1813, 2367, 2967
BssT1I CCWWGG 4 cut(s) 83, 511, 1760, 2367
Bst2UI CCWGG 2 cut(s) 1814, 2969
Bst4CI ACNGT 7 cut(s) 598, 721, 751, 807, 1282, 1875, 3068
Bst6I CTCTTC 7 cut(s) 26, 407, 610, 826, 2247, 2319, 2619
BstAFI CTTAAG 2 cut(s) 1538, 2894
BstAPI GCANNNNNTGC 5 cut(s) 362, 740, 1145, 1700, 1709
BstAUI TGTACA 1 cut(s) 228
BstBAI YACGTR 1 cut(s) 593
BstC8I GCNNGC 7 cut(s) 745, 1119, 1141, 1636, 1666, 2237, 2604
BstDSI CCRYGG 2 cut(s) 83, 511
BstENI CCTNNNNNAGG 2 cut(s) 2191, 3050
BstF5I GGATG 7 cut(s) 538, 935, 1549, 2290, 2479, 2506, 2537
BstFNI CGCG 1 cut(s) 259
BstHHI GCGC 1 cut(s) 259
BstMAI GTCTC 6 cut(s) 99, 174, 531, 654, 1113, 1364
BstMWI GCNNNNNNNGC 7 cut(s) 362, 740, 1145, 1691, 1700, 1706, 1709
BstNI CCWGG 2 cut(s) 1814, 2969
BstNSI RCATGY 2 cut(s) 68, 1340
BstSCI CCNGG 3 cut(s) 1812, 2021, 2967
BstSFI CTRYAG 2 cut(s) 1112, 2073
BstSLI GKGCMC 1 cut(s) 2416
BstUI CGCG 1 cut(s) 259
BstV2I GAAGAC 2 cut(s) 570, 2549
BstX2I RGATCY 4 cut(s) 1620, 1676, 1969, 2338
BstXI CCANNNNNNTGG 1 cut(s) 2228
BstYI RGATCY 4 cut(s) 1620, 1676, 1969, 2338
Bsu36I CCTNAGG 1 cut(s) 2873
BsuRI GGCC 4 cut(s) 88, 488, 1578, 2220
BtgI CCRYGG 2 cut(s) 83, 511
BtsCI GGATG 7 cut(s) 538, 935, 1549, 2290, 2479, 2506, 2537
BtsIMutI CAGTG 8 cut(s) 398, 552, 747, 803, 891, 2515, 2895, 3073
BveI ACCTGC 3 cut(s) 748, 847, 2399
Cac8I GCNNGC 7 cut(s) 745, 1119, 1141, 1636, 1666, 2237, 2604
CaiI CAGNNNCTG 4 cut(s) 740, 2768, 2825, 3072
CciI TCATGA 2 cut(s) 2134, 2580
CfoI GCGC 1 cut(s) 259
Cfr10I RCCGGY 1 cut(s) 436
Cfr13I GGNCC 4 cut(s) 87, 1844, 2442, 2665
CseI GACGC 1 cut(s) 141
Csp6I GTAC 8 cut(s) 229, 594, 620, 722, 1092, 1104, 1323, 1917
CspCI CAANNNNNGTGG 2 cut(s) 387, 422
CviQI GTAC 8 cut(s) 229, 594, 620, 722, 1092, 1104, 1323, 1917
DraI TTTAAA 2 cut(s) 1263, 2545
DraIII CACNNNGTG 1 cut(s) 641
EaeI YGGCCR 2 cut(s) 486, 2218
Eam1104I CTCTTC 7 cut(s) 26, 407, 610, 826, 2247, 2319, 2619
EarI CTCTTC 7 cut(s) 26, 407, 610, 826, 2247, 2319, 2619
Eco130I CCWWGG 4 cut(s) 83, 511, 1760, 2367
Eco24I GRGCYC 1 cut(s) 2864
Eco31I GGTCTC 2 cut(s) 531, 1364
Eco32I GATATC 1 cut(s) 3038
Eco47I GGWCC 3 cut(s) 1844, 2442, 2665
Eco57I CTGAAG 4 cut(s) 1107, 1452, 2343, 3026
Eco81I CCTNAGG 1 cut(s) 2873
Eco88I CYCGRG 1 cut(s) 1164
EcoNI CCTNNNNNAGG 2 cut(s) 2191, 3050
EcoO109I RGGNCCY 1 cut(s) 2665
EcoRI GAATTC 1 cut(s) 996
EcoRII CCWGG 2 cut(s) 1812, 2967
EcoRV GATATC 1 cut(s) 3038
EcoT14I CCWWGG 4 cut(s) 83, 511, 1760, 2367
EcoT22I ATGCAT 1 cut(s) 775
EcoT38I GRGCYC 1 cut(s) 2864
ErhI CCWWGG 4 cut(s) 83, 511, 1760, 2367
Esp3I CGTCTC 3 cut(s) 99, 174, 1113
FalI AAGNNNNNCTT 4 cut(s) 266, 298, 1753, 1785
FauNDI CATATG 1 cut(s) 2064
FbaI TGATCA 6 cut(s) 145, 571, 1174, 2131, 2512, 2655
FblI GTMKAC 1 cut(s) 1523
FokI GGATG 7 cut(s) 545, 922, 1556, 2297, 2486, 2513, 2524
FriOI GRGCYC 1 cut(s) 2864
FspBI CTAG 5 cut(s) 696, 1224, 1491, 1647, 2910
GlaI GCGC 1 cut(s) 258
GsaI CCCAGC 1 cut(s) 2867
GsuI CTGGAG 2 cut(s) 1538, 2802
HaeIII GGCC 4 cut(s) 88, 488, 1578, 2220
HapII CCGG 4 cut(s) 28, 218, 437, 2023
HgaI GACGC 1 cut(s) 141
HhaI GCGC 1 cut(s) 259
Hin6I GCGC 1 cut(s) 257
HinP1I GCGC 1 cut(s) 257
HincII GTYRAC 2 cut(s) 1767, 2988
HindII GTYRAC 2 cut(s) 1767, 2988
HindIII AAGCTT 3 cut(s) 1740, 2007, 2547
HpaII CCGG 4 cut(s) 28, 218, 437, 2023
Hpy166II GTNNAC 5 cut(s) 1524, 1767, 2166, 2414, 2988
Hpy188I TCNGA 8 cut(s) 676, 834, 1002, 1501, 2350, 2596, 3024, 3035
Hpy8I GTNNAC 5 cut(s) 1524, 1767, 2166, 2414, 2988
Hpy99I CGWCG 1 cut(s) 2498
HpyAV CCTTC 9 cut(s) 693, 879, 1082, 1365, 1684, 2164, 3007, 3019, 3055
HpyCH4III ACNGT 7 cut(s) 598, 721, 751, 807, 1282, 1875, 3068
HpyCH4IV ACGT 2 cut(s) 592, 1106
HpyF10VI GCNNNNNNNGC 7 cut(s) 362, 740, 1145, 1691, 1700, 1706, 1709
HpySE526I ACGT 2 cut(s) 592, 1106
HspAI GCGC 1 cut(s) 257
KpnI GGTACC 1 cut(s) 623
Ksp22I TGATCA 6 cut(s) 145, 571, 1174, 2131, 2512, 2655
LguI GCTCTTC 1 cut(s) 826
LmnI GCTCC 4 cut(s) 482, 1633, 2263, 2859
LweI GCATC 5 cut(s) 1228, 2173, 2319, 2574, 2657
MaeI CTAG 5 cut(s) 696, 1224, 1491, 1647, 2910
MaeII ACGT 2 cut(s) 592, 1106
MaeIII GTNAC 8 cut(s) 260, 598, 907, 1255, 1607, 2680, 2770, 3068
MfeI CAATTG 3 cut(s) 684, 1527, 1788
MflI RGATCY 4 cut(s) 1620, 1676, 1969, 2338
MhlI GDGCHC 2 cut(s) 2416, 2864
MlsI TGGCCA 2 cut(s) 488, 2220
MluNI TGGCCA 2 cut(s) 488, 2220
MlyI GAGTC 6 cut(s) 125, 212, 904, 974, 1529, 2042
MmeI TCCRAC 6 cut(s) 157, 1276, 1361, 2262, 2913, 3002
Mox20I TGGCCA 2 cut(s) 488, 2220
Mph1103I ATGCAT 1 cut(s) 775
MroXI GAANNNNTTC 1 cut(s) 2174
MscI TGGCCA 2 cut(s) 488, 2220
MslI CAYNNNNRTG 4 cut(s) 386, 752, 786, 2226
Msp20I TGGCCA 2 cut(s) 488, 2220
MspA1I CMGCKG 5 cut(s) 1367, 1883, 2078, 2387, 2822
MspCI CTTAAG 2 cut(s) 1538, 2894
MspI CCGG 4 cut(s) 28, 218, 437, 2023
MspR9I CCNGG 3 cut(s) 1814, 2023, 2969
MunI CAATTG 3 cut(s) 684, 1527, 1788
Mva1269I GAATGC 1 cut(s) 1035
MvaI CCWGG 2 cut(s) 1814, 2969
MvnI CGCG 1 cut(s) 259
MwoI GCNNNNNNNGC 7 cut(s) 362, 740, 1145, 1691, 1700, 1706, 1709
NciI CCSGG 1 cut(s) 2023
NcoI CCATGG 2 cut(s) 83, 511
NdeI CATATG 1 cut(s) 2064
NlaIV GGNNCC 6 cut(s) 621, 714, 1024, 1971, 2666, 2861
NmeAIII GCCGAG 2 cut(s) 233, 1621
NmuCI GTSAC 4 cut(s) 260, 907, 1255, 3068
NsiI ATGCAT 1 cut(s) 775
NspI RCATGY 2 cut(s) 68, 1340
OliI CACNNNNGTG 1 cut(s) 386
PaeR7I CTCGAG 1 cut(s) 1164
PagI TCATGA 2 cut(s) 2134, 2580
PaqCI CACCTGC 2 cut(s) 748, 2399
PciI ACATGT 1 cut(s) 64
PciSI GCTCTTC 1 cut(s) 826
PctI GAATGC 1 cut(s) 1035
PdmI GAANNNNTTC 1 cut(s) 2174
PflFI GACNNNGTC 1 cut(s) 913
PflMI CCANNNNNTGG 1 cut(s) 1380
PfoI TCCNGGA 1 cut(s) 2021
PleI GAGTC 6 cut(s) 124, 211, 904, 973, 1528, 2041
PpsI GAGTC 6 cut(s) 124, 211, 904, 973, 1528, 2041
Ppu21I YACGTR 1 cut(s) 593
PpuMI RGGWCCY 1 cut(s) 2665
PscI ACATGT 1 cut(s) 64
PshBI ATTAAT 1 cut(s) 1724
PsiI TTATAA 1 cut(s) 978
Psp5II RGGWCCY 1 cut(s) 2665
Psp6I CCWGG 2 cut(s) 1812, 2967
PspFI CCCAGC 1 cut(s) 2863
PspGI CCWGG 2 cut(s) 1812, 2967
PspN4I GGNNCC 6 cut(s) 621, 714, 1024, 1971, 2666, 2861
PspPI GGNCC 4 cut(s) 87, 1844, 2442, 2665
PspPPI RGGWCCY 1 cut(s) 2665
PsrI GAACNNNNNNTAC 4 cut(s) 705, 737, 1444, 1476
PstI CTGCAG 2 cut(s) 1116, 2077
PstNI CAGNNNCTG 4 cut(s) 740, 2768, 2825, 3072
PsuI RGATCY 4 cut(s) 1620, 1676, 1969, 2338
PsyI GACNNNGTC 1 cut(s) 913
PvuII CAGCTG 4 cut(s) 1367, 2078, 2387, 2822
RsaI GTAC 8 cut(s) 230, 595, 621, 723, 1093, 1105, 1324, 1918
RsaNI GTAC 8 cut(s) 229, 594, 620, 722, 1092, 1104, 1323, 1917
RseI CAYNNNNRTG 4 cut(s) 386, 752, 786, 2226
SapI GCTCTTC 1 cut(s) 826
Sau96I GGNCC 4 cut(s) 87, 1844, 2442, 2665
ScaI AGTACT 1 cut(s) 1324
SchI GAGTC 6 cut(s) 125, 212, 904, 974, 1529, 2042
ScrFI CCNGG 3 cut(s) 1814, 2023, 2969
SduI GDGCHC 2 cut(s) 2416, 2864
SfaNI GCATC 5 cut(s) 1228, 2173, 2319, 2574, 2657
SfcI CTRYAG 2 cut(s) 1112, 2073
Sfr274I CTCGAG 1 cut(s) 1164
SinI GGWCC 3 cut(s) 1844, 2442, 2665
SlaI CTCGAG 1 cut(s) 1164
SmiMI CAYNNNNRTG 4 cut(s) 386, 752, 786, 2226
SmlI CTYRAG 7 cut(s) 1099, 1164, 1538, 1680, 1830, 2089, 2894
SmoI CTYRAG 7 cut(s) 1099, 1164, 1538, 1680, 1830, 2089, 2894
SpeI ACTAGT 1 cut(s) 2909
SsiI CCGC 4 cut(s) 41, 657, 1559, 1883
SspI AATATT 2 cut(s) 982, 1199
SspMI CTAG 5 cut(s) 696, 1224, 1491, 1647, 2910
StyD4I CCNGG 3 cut(s) 1812, 2021, 2967
StyI CCWWGG 4 cut(s) 83, 511, 1760, 2367
TaaI ACNGT 7 cut(s) 598, 721, 751, 807, 1282, 1875, 3068
TaiI ACGT 2 cut(s) 595, 1109
TaqI TCGA 4 cut(s) 307, 1165, 1781, 2209
TatI WGTACW 2 cut(s) 228, 1322
TauI GCSGC 1 cut(s) 1562
TscAI CASTG 8 cut(s) 405, 559, 754, 810, 891, 2515, 2895, 3073
TseFI GTSAC 4 cut(s) 260, 907, 1255, 3068
Tsp45I GTSAC 4 cut(s) 260, 907, 1255, 3068
TspGWI ACGGA 3 cut(s) 1336, 2543, 3038
TspRI CASTG 8 cut(s) 405, 559, 754, 810, 891, 2515, 2895, 3073
Tth111I GACNNNGTC 1 cut(s) 913
Van91I CCANNNNNTGG 1 cut(s) 1380
Vha464I CTTAAG 2 cut(s) 1538, 2894
VneI GTGCAC 1 cut(s) 2412
VpaK11BI GGWCC 3 cut(s) 1844, 2442, 2665
VspI ATTAAT 1 cut(s) 1724
XagI CCTNNNNNAGG 2 cut(s) 2191, 3050
XapI RAATTY 3 cut(s) 194, 996, 2962
XbaI TCTAGA 1 cut(s) 1646
XceI RCATGY 2 cut(s) 68, 1340
XcmI CCANNNNNNNNNTGG 3 cut(s) 518, 965, 3006
XhoI CTCGAG 1 cut(s) 1164
XmiI GTMKAC 1 cut(s) 1523
XmnI GAANNNNTTC 1 cut(s) 2174
XspI CTAG 5 cut(s) 696, 1224, 1491, 1647, 2910
ZrmI AGTACT 1 cut(s) 1324
Zsp2I ATGCAT 1 cut(s) 775
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.