Rroxscaffold_5G00385220

Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0014949
Physical Location & Seq
Forward (+)
64321243 .. 64324204
2962 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00385220.1

Sequence Viewer

Length: 1329 bp
ATGATCGGCCGGATGGATCAGGCTCTGACGTACAAAGGTTGGTCTGAAAACGAAAACAGTGTTGTTGGGATCCACTCTTTTCCTTGGGCTAGATGGAAATCCATATCTTTGGCCCAAAAATTACTAGCCCACAATATCGGGTACCATACCAAAATGAGAAGGCCGAGGCCACAAGGGCCAGTGAAACAGAGTCTCCTCCCCAGCCATCCCTTTCCCTCCTGTAAATCCTCTCTTCCACTGCACAACCCGCCATTCTTGCTTACCTTCACTCACCCACAAACCCAAAAAAATAACAAAGTTCCACCACCACCTCTCTCTCTCTTTCCCTATTATCTCACAAACCATGGCATTTCATTCCCTCCTCCTATTCTCTCTTATATTTTCCCTCCTAACCCAAACACACTCCCGCCTCACCCCAAACTACTACGACAAAACATGTCCCGACTTCGAAAAAATCGTCCGTCAAGTCGTCACCGACAAGCAGCTCGCCTCCCTCACCACCGCCGCCGCCACCCTCCGCCTCTTCTTCCACGACTGCATGGTCGAGGGCTGCGACGCCTCCATTCTCATCGCCTCCAACGCCTTCAACAAAGCCGAGCGCGACTCCGACATCAACCTCTCCTCGCCGGCGACGGCTTCGACGTCATCACCAGTATCAAGACCAACCTGGAGCTCACGTGCCCCGGCATCGTTTCCTGCGCCGACATCCTCGTCGCCGCCACCCGCAACCTCATCAACATGGTCGGCGGGCCCTACTACCCCGTCCGCTTCGGCCGCAAAGACGGCTTCGTCTCAAGAGCCGAAGCCGTCGAAGGTAACCTCGCCAGGGCCAACATGTCCTTGTCCCAGATCATCAACCTCTTCGCCGGTCGGAGACTCAACGTCCAGGAAATGGTCGCCCTCGCTGGGTCGCACACCATTGGATTCTCCCACTGCAAGGAGTTCAGTAATAGGCTCTTCAAGTTCAGCCCTACCTCCGAGAACGACCCGTCGTACAACCCCCAGTTCGCCGAGGGGCTCAGGAAGCTCTGCGCCAACTACACCCAGGACCCGCAGATGTCGGCCTTCAACGACATCATGACACCTGGCAAGTTCGACAACATGTACTTTAGAAACTTGCAGAGGGGGCTAGGGTTGTTGCCTTCCGACCAGGCCATGGCGGTGGACAGGAGGACGAGGCCGCTCGTCGACCTCTACGCGGCGAACCAGACCAGGTGGTTTGACGATTTTTCTCGCGTTATGGAGAAGGTTAGCCTTTATAATGTTAAGACGGGAAGGAAGGGAGAGGTCCGGCGGAGATGTGATGCCTTCGACAATCTCAAAACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 ko01100 ko01110 map00940 map01100 map01110
Pfam Domains
Protein Families
peroxidase

Protein Analysis

442

Amino Acids

50.46

Weight (kDa)

10.79

Isoelectric Point (pI)

60.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
peroxidase PF00141 211 - 402 1.8e-58 Peroxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014949)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G24110
malus_domestica MD13G1086200.v1.1 MD16G1085600.v1.1
prunus_persica Prupe.1G260500_v2.0.a1
pyrus_communis pycom13g07440
rosa_chinensis RchiOBHm_Chr4g0444711
rosa_laevigata RLG00000005810
rosa_multiflora Rmu_co8403781.1_g000001 Rmu_sc0012443.1_g000010
rosa_roxburghii Rroxscaffold_5G00385220
rosa_rugosa Rorug04G0354900
rosa_samantha Rh4AG415000 Rh4BG426500 Rh4CG441500 Rh4DG422500
rosa_wichuraiana Rw4G035640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1260
AasI GACNNNNNNGTC 3 cut(s) 540, 710, 788
AatII GACGTC 1 cut(s) 645
Acc65I GGTACC 1 cut(s) 141
AccB1I GGYRCC 1 cut(s) 141
AccB7I CCANNNNNTGG 2 cut(s) 892, 1156
AccBSI CCGCTC 1 cut(s) 1183
AccI GTMKAC 1 cut(s) 1188
AccII CGCG 3 cut(s) 601, 1199, 1236
AclWI GGATC 3 cut(s) 24, 64, 77
AcoI YGGCCR 2 cut(s) 7, 772
AcvI CACGTG 1 cut(s) 678
AcyI GRCGYC 2 cut(s) 556, 642
AfaI GTAC 4 cut(s) 32, 143, 995, 1106
AfiI CCNNNNNNNGG 6 cut(s) 826, 892, 906, 937, 1156, 1198
AflIII ACRYGT 3 cut(s) 435, 834, 1101
AgsI TTSAA 3 cut(s) 587, 961, 1069
AhdI GACNNNNNGTC 1 cut(s) 881
AjnI CCWGG 7 cut(s) 666, 824, 885, 1044, 1084, 1149, 1211
AluBI AGCT 3 cut(s) 485, 673, 1027
AluI AGCT 3 cut(s) 485, 673, 1027
Alw21I GWGCWC 1 cut(s) 675
Alw26I GTCTC 3 cut(s) 197, 796, 868
AlwI GGATC 3 cut(s) 24, 64, 77
AlwNI CAGNNNCTG 1 cut(s) 25
ApaI GGGCCC 1 cut(s) 753
ApeKI GCWGC 2 cut(s) 482, 550
ArsI GACNNNNNNTTYG 2 cut(s) 442, 474
Asp718I GGTACC 1 cut(s) 141
AspLEI GCGC 3 cut(s) 601, 701, 1034
AspS9I GGNCC 7 cut(s) 112, 176, 749, 750, 828, 1048, 1288
AsuC2I CCSGG 1 cut(s) 684
AsuHPI GGTGA 5 cut(s) 263, 404, 464, 488, 640
AsuII TTCGAA 1 cut(s) 448
AvaII GGWCC 2 cut(s) 1048, 1288
BaeGI GKGCMC 2 cut(s) 683, 753
BamHI GGATCC 1 cut(s) 69
BanI GGYRCC 1 cut(s) 141
BanII GRGCYC 3 cut(s) 675, 753, 1020
BbrPI CACGTG 1 cut(s) 678
Bbv12I GWGCWC 1 cut(s) 675
BbvI GCAGC 2 cut(s) 494, 537
BccI CCATC 3 cut(s) 7, 87, 213
BceAI ACGGC 3 cut(s) 649, 791, 799
BciT130I CCWGG 7 cut(s) 668, 826, 887, 1046, 1086, 1151, 1213
BcnI CCSGG 1 cut(s) 684
BcoDI GTCTC 3 cut(s) 197, 796, 868
BfaI CTAG 3 cut(s) 90, 125, 1130
BglI GCCNNNNNGGC 1 cut(s) 175
BisI GCNGC 8 cut(s) 483, 505, 508, 551, 717, 775, 1181, 1200
BlsI GCNGC 8 cut(s) 484, 506, 509, 552, 718, 776, 1182, 1201
Bme1390I CCNGG 8 cut(s) 668, 684, 826, 887, 1046, 1086, 1151, 1213
Bme18I GGWCC 2 cut(s) 1048, 1288
BmeRI GACNNNNNGTC 1 cut(s) 881
BmgT120I GGNCC 7 cut(s) 112, 176, 749, 750, 828, 1048, 1288
BmiI GGNNCC 4 cut(s) 71, 143, 751, 1050
BmrFI CCNGG 8 cut(s) 668, 684, 826, 887, 1046, 1086, 1151, 1213
BmrI ACTGGG 1 cut(s) 997
BmsI GCATC 2 cut(s) 696, 1294
BmuI ACTGGG 1 cut(s) 997
BplI GAGNNNNNCTC 2 cut(s) 588, 620
BpmI CTGGAG 1 cut(s) 689
Bpu10I CCTNAGC 1 cut(s) 1019
Bpu14I TTCGAA 1 cut(s) 448
BpuEI CTTGAG 1 cut(s) 778
BpuMI CCSGG 1 cut(s) 684
BsaAI YACGTR 1 cut(s) 678
BsaBI GATNNNNATC 1 cut(s) 97
BsaHI GRCGYC 2 cut(s) 556, 642
BsaJI CCNNGG 8 cut(s) 83, 164, 343, 682, 825, 1011, 1044, 1155
BsaXI ACNNNNNCTCC 4 cut(s) 177, 207, 662, 692
Bsc4I CCNNNNNNNGG 6 cut(s) 826, 892, 906, 937, 1156, 1198
Bse118I RCCGGY 2 cut(s) 626, 866
Bse1I ACTGG 3 cut(s) 179, 651, 1003
Bse8I GATNNNNATC 1 cut(s) 97
BseBI CCWGG 7 cut(s) 668, 826, 887, 1046, 1086, 1151, 1213
BseDI CCNNGG 8 cut(s) 83, 164, 343, 682, 825, 1011, 1044, 1155
BseGI GGATG 3 cut(s) 18, 205, 705
BseJI GATNNNNATC 1 cut(s) 97
BseLI CCNNNNNNNGG 6 cut(s) 826, 892, 906, 937, 1156, 1198
BseMII CTCAG 1 cut(s) 1033
BseNI ACTGG 3 cut(s) 179, 651, 1003
BseRI GAGGAG 3 cut(s) 185, 351, 611
BseSI GKGCMC 2 cut(s) 683, 753
BseX3I CGGCCG 2 cut(s) 7, 772
BseXI GCAGC 2 cut(s) 494, 537
BseYI CCCAGC 2 cut(s) 200, 905
BsgI GTGCAG 1 cut(s) 224
Bsh1236I CGCG 3 cut(s) 601, 1199, 1236
Bsh1285I CGRYCG 3 cut(s) 10, 775, 871
BshNI GGYRCC 1 cut(s) 141
BsiEI CGRYCG 3 cut(s) 10, 775, 871
BsiHKAI GWGCWC 1 cut(s) 675
BsiSI CCGG 5 cut(s) 10, 627, 684, 867, 1291
BslFI GGGAC 2 cut(s) 424, 829
BslI CCNNNNNNNGG 6 cut(s) 826, 892, 906, 937, 1156, 1198
BsmAI GTCTC 3 cut(s) 197, 796, 868
BsmBI CGTCTC 1 cut(s) 796
BsmFI GGGAC 2 cut(s) 424, 829
Bsp119I TTCGAA 1 cut(s) 448
Bsp120I GGGCCC 1 cut(s) 749
Bsp1286I GDGCHC 4 cut(s) 675, 683, 753, 1020
Bsp143I GATC 4 cut(s) 3, 16, 69, 849
Bsp19I CCATGG 2 cut(s) 343, 1155
BspCNI CTCAG 1 cut(s) 1032
BspFNI CGCG 3 cut(s) 601, 1199, 1236
BspHI TCATGA 1 cut(s) 1077
BspLI GGNNCC 4 cut(s) 71, 143, 751, 1050
BspPI GGATC 3 cut(s) 24, 64, 77
BspQI GCTCTTC 1 cut(s) 962
BspT104I TTCGAA 1 cut(s) 448
BspT107I GGYRCC 1 cut(s) 141
BsrBI CCGCTC 1 cut(s) 1183
BsrFI RCCGGY 2 cut(s) 626, 866
BsrI ACTGG 3 cut(s) 179, 651, 1003
BssAI RCCGGY 2 cut(s) 626, 866
BssECI CCNNGG 8 cut(s) 83, 164, 343, 682, 825, 1011, 1044, 1155
BssMI GATC 4 cut(s) 3, 16, 69, 849
BssNI GRCGYC 2 cut(s) 556, 642
BssT1I CCWWGG 3 cut(s) 83, 343, 1155
Bst2UI CCWGG 7 cut(s) 668, 826, 887, 1046, 1086, 1151, 1213
Bst4CI ACNGT 1 cut(s) 59
Bst6I CTCTTC 4 cut(s) 237, 528, 866, 962
BstACI GRCGYC 2 cut(s) 556, 642
BstBAI YACGTR 1 cut(s) 678
BstBI TTCGAA 1 cut(s) 448
BstC8I GCNNGC 3 cut(s) 487, 628, 749
BstDEI CTNAG 1 cut(s) 1019
BstDSI CCRYGG 2 cut(s) 343, 1155
BstEII GGTNACC 1 cut(s) 815
BstF5I GGATG 3 cut(s) 18, 205, 705
BstFNI CGCG 3 cut(s) 601, 1199, 1236
BstHHI GCGC 3 cut(s) 601, 701, 1034
BstKTI GATC 4 cut(s) 6, 19, 72, 852
BstMAI GTCTC 3 cut(s) 197, 796, 868
BstMBI GATC 4 cut(s) 3, 16, 69, 849
BstMCI CGRYCG 3 cut(s) 10, 775, 871
BstMWI GCNNNNNNNGC 8 cut(s) 175, 247, 256, 579, 774, 783, 1024, 1126
BstNI CCWGG 7 cut(s) 668, 826, 887, 1046, 1086, 1151, 1213
BstNSI RCATGY 3 cut(s) 439, 838, 1105
BstPI GGTNACC 1 cut(s) 815
BstSCI CCNGG 8 cut(s) 666, 682, 824, 885, 1044, 1084, 1149, 1211
BstSLI GKGCMC 2 cut(s) 683, 753
BstUI CGCG 3 cut(s) 601, 1199, 1236
BstV1I GCAGC 2 cut(s) 494, 537
BstX2I RGATCY 1 cut(s) 69
BstXI CCANNNNNNTGG 2 cut(s) 109, 1162
BstYI RGATCY 1 cut(s) 69
BstZI CGGCCG 2 cut(s) 7, 772
BtgI CCRYGG 2 cut(s) 343, 1155
BtgZI GCGATG 1 cut(s) 554
BtsCI GGATG 3 cut(s) 18, 205, 705
BtsI GCAGTG 2 cut(s) 236, 931
BtsIMutI CAGTG 4 cut(s) 64, 186, 236, 931
Cac8I GCNNGC 3 cut(s) 487, 628, 749
CaiI CAGNNNCTG 1 cut(s) 25
CciI TCATGA 1 cut(s) 1077
CfoI GCGC 3 cut(s) 601, 701, 1034
Cfr10I RCCGGY 2 cut(s) 626, 866
Cfr13I GGNCC 7 cut(s) 112, 176, 749, 750, 828, 1048, 1288
CseI GACGC 1 cut(s) 564
CsiI ACCWGGT 1 cut(s) 1211
Csp6I GTAC 4 cut(s) 31, 142, 994, 1105
CviAII CATG 8 cut(s) 344, 436, 539, 739, 835, 1078, 1102, 1156
CviQI GTAC 4 cut(s) 31, 142, 994, 1105
DdeI CTNAG 1 cut(s) 1019
DpnI GATC 4 cut(s) 5, 18, 71, 851
DpnII GATC 4 cut(s) 3, 16, 69, 849
DrdI GACNNNNNNGTC 3 cut(s) 540, 710, 788
DriI GACNNNNNGTC 1 cut(s) 881
DseDI GACNNNNNNGTC 3 cut(s) 540, 710, 788
EaeI YGGCCR 2 cut(s) 7, 772
EagI CGGCCG 2 cut(s) 7, 772
Eam1104I CTCTTC 4 cut(s) 237, 528, 866, 962
Eam1105I GACNNNNNGTC 1 cut(s) 881
EarI CTCTTC 4 cut(s) 237, 528, 866, 962
EciI GGCGGA 2 cut(s) 507, 1309
Ecl136II GAGCTC 1 cut(s) 673
EclXI CGGCCG 2 cut(s) 7, 772
Eco130I CCWWGG 3 cut(s) 83, 343, 1155
Eco24I GRGCYC 3 cut(s) 675, 753, 1020
Eco47I GGWCC 2 cut(s) 1048, 1288
Eco52I CGGCCG 2 cut(s) 7, 772
Eco53kI GAGCTC 1 cut(s) 673
Eco72I CACGTG 1 cut(s) 678
Eco91I GGTNACC 1 cut(s) 815
EcoICRI GAGCTC 1 cut(s) 673
EcoO109I RGGNCCY 2 cut(s) 750, 1048
EcoO65I GGTNACC 1 cut(s) 815
EcoRII CCWGG 7 cut(s) 666, 824, 885, 1044, 1084, 1149, 1211
EcoT14I CCWWGG 3 cut(s) 83, 343, 1155
EcoT38I GRGCYC 3 cut(s) 675, 753, 1020
ErhI CCWWGG 3 cut(s) 83, 343, 1155
Esp3I CGTCTC 1 cut(s) 796
FaeI CATG 8 cut(s) 347, 439, 542, 742, 838, 1081, 1105, 1159
FaqI GGGAC 2 cut(s) 424, 829
FatI CATG 8 cut(s) 343, 435, 538, 738, 834, 1077, 1101, 1155
FauI CCCGC 5 cut(s) 255, 414, 731, 740, 1059
FblI GTMKAC 1 cut(s) 1188
Fnu4HI GCNGC 8 cut(s) 483, 505, 508, 551, 717, 775, 1181, 1200
FokI GGATG 3 cut(s) 25, 192, 692
FriOI GRGCYC 3 cut(s) 675, 753, 1020
Fsp4HI GCNGC 8 cut(s) 483, 505, 508, 551, 717, 775, 1181, 1200
FspBI CTAG 3 cut(s) 90, 125, 1130
GlaI GCGC 3 cut(s) 600, 700, 1033
GluI GCNGC 8 cut(s) 483, 505, 508, 551, 717, 775, 1181, 1200
GsaI CCCAGC 2 cut(s) 204, 909
GsuI CTGGAG 1 cut(s) 689
HapII CCGG 5 cut(s) 10, 627, 684, 867, 1291
HgaI GACGC 1 cut(s) 564
HhaI GCGC 3 cut(s) 601, 701, 1034
Hin1I GRCGYC 2 cut(s) 556, 642
Hin1II CATG 8 cut(s) 347, 439, 542, 742, 838, 1081, 1105, 1159
Hin6I GCGC 3 cut(s) 599, 699, 1032
HinP1I GCGC 3 cut(s) 599, 699, 1032
HincII GTYRAC 1 cut(s) 1189
HindII GTYRAC 1 cut(s) 1189
HinfI GANTC 4 cut(s) 190, 603, 876, 924
HpaII CCGG 5 cut(s) 10, 627, 684, 867, 1291
HphI GGTGA 5 cut(s) 263, 404, 464, 488, 640
Hpy166II GTNNAC 2 cut(s) 1165, 1189
Hpy188I TCNGA 6 cut(s) 27, 46, 608, 873, 979, 1147
Hpy188III TCNNGA 5 cut(s) 441, 658, 795, 1021, 1078
Hpy8I GTNNAC 2 cut(s) 1165, 1189
Hpy99I CGWCG 7 cut(s) 558, 635, 644, 716, 812, 994, 1190
HpyCH4III ACNGT 1 cut(s) 59
HpyCH4IV ACGT 4 cut(s) 29, 642, 677, 882
HpyCH4V TGCA 4 cut(s) 241, 538, 936, 1120
HpyF10VI GCNNNNNNNGC 8 cut(s) 175, 247, 256, 579, 774, 783, 1024, 1126
HpyF3I CTNAG 1 cut(s) 1019
HpySE526I ACGT 4 cut(s) 29, 642, 677, 882
Hsp92I GRCGYC 2 cut(s) 556, 642
Hsp92II CATG 8 cut(s) 347, 439, 542, 742, 838, 1081, 1105, 1159
HspAI GCGC 3 cut(s) 599, 699, 1032
KpnI GGTACC 1 cut(s) 145
KroI GCCGGC 1 cut(s) 626
KroNI GCCGGC 1 cut(s) 628
Kzo9I GATC 4 cut(s) 3, 16, 69, 849
LguI GCTCTTC 1 cut(s) 962
LmnI GCTCC 1 cut(s) 670
Lsp1109I GCAGC 2 cut(s) 494, 537
LweI GCATC 2 cut(s) 696, 1294
MabI ACCWGGT 1 cut(s) 1211
MaeI CTAG 3 cut(s) 90, 125, 1130
MaeII ACGT 4 cut(s) 29, 642, 677, 882
MaeIII GTNAC 2 cut(s) 470, 815
MalI GATC 4 cut(s) 5, 18, 71, 851
MbiI CCGCTC 1 cut(s) 1183
MboI GATC 4 cut(s) 3, 16, 69, 849
MboII GAAGA 5 cut(s) 224, 515, 518, 853, 949
MflI RGATCY 1 cut(s) 69
MhlI GDGCHC 4 cut(s) 675, 683, 753, 1020
MluCI AATT 1 cut(s) 119
MlyI GAGTC 3 cut(s) 199, 597, 870
MmeI TCCRAC 4 cut(s) 601, 631, 851, 1170
MreI CGCCGGCG 1 cut(s) 626
MroNI GCCGGC 1 cut(s) 626
MseI TTAA 1 cut(s) 1266
MslI CAYNNNNRTG 2 cut(s) 737, 1160
MspI CCGG 5 cut(s) 10, 627, 684, 867, 1291
MspR9I CCNGG 8 cut(s) 668, 684, 826, 887, 1046, 1086, 1151, 1213
MvaI CCWGG 7 cut(s) 668, 826, 887, 1046, 1086, 1151, 1213
MvnI CGCG 3 cut(s) 601, 1199, 1236
MwoI GCNNNNNNNGC 8 cut(s) 175, 247, 256, 579, 774, 783, 1024, 1126
NaeI GCCGGC 1 cut(s) 628
NciI CCSGG 1 cut(s) 684
NcoI CCATGG 2 cut(s) 343, 1155
NdeII GATC 4 cut(s) 3, 16, 69, 849
NgoMIV GCCGGC 1 cut(s) 626
NlaIII CATG 8 cut(s) 347, 439, 542, 742, 838, 1081, 1105, 1159
NlaIV GGNNCC 4 cut(s) 71, 143, 751, 1050
NmeAIII GCCGAG 3 cut(s) 189, 620, 1036
NmuCI GTSAC 1 cut(s) 470
NspI RCATGY 3 cut(s) 439, 838, 1105
NspV TTCGAA 1 cut(s) 448
PagI TCATGA 1 cut(s) 1077
PciI ACATGT 3 cut(s) 435, 834, 1101
PciSI GCTCTTC 1 cut(s) 962
PcsI WCGNNNNNNNCGW 3 cut(s) 454, 550, 639
PdiI GCCGGC 1 cut(s) 628
PfeI GAWTC 1 cut(s) 924
PflMI CCANNNNNTGG 2 cut(s) 892, 1156
PfoI TCCNGGA 1 cut(s) 885
PkrI GCNGC 8 cut(s) 484, 506, 509, 552, 718, 776, 1182, 1201
PleI GAGTC 3 cut(s) 198, 597, 870
PmaCI CACGTG 1 cut(s) 678
PmlI CACGTG 1 cut(s) 678
PpsI GAGTC 3 cut(s) 198, 597, 870
Ppu21I YACGTR 1 cut(s) 678
PpuMI RGGWCCY 1 cut(s) 1048
PscI ACATGT 3 cut(s) 435, 834, 1101
PsiI TTATAA 1 cut(s) 1260
Psp124BI GAGCTC 1 cut(s) 675
Psp5II RGGWCCY 1 cut(s) 1048
Psp6I CCWGG 7 cut(s) 666, 824, 885, 1044, 1084, 1149, 1211
PspCI CACGTG 1 cut(s) 678
PspEI GGTNACC 1 cut(s) 815
PspFI CCCAGC 2 cut(s) 200, 905
PspGI CCWGG 7 cut(s) 666, 824, 885, 1044, 1084, 1149, 1211
PspN4I GGNNCC 4 cut(s) 71, 143, 751, 1050
PspOMI GGGCCC 1 cut(s) 749
PspPI GGNCC 7 cut(s) 112, 176, 749, 750, 828, 1048, 1288
PspPPI RGGWCCY 1 cut(s) 1048
PstNI CAGNNNCTG 1 cut(s) 25
PsuI RGATCY 1 cut(s) 69
RsaI GTAC 4 cut(s) 32, 143, 995, 1106
RsaNI GTAC 4 cut(s) 31, 142, 994, 1105
RseI CAYNNNNRTG 2 cut(s) 737, 1160
SacI GAGCTC 1 cut(s) 675
SalI GTCGAC 1 cut(s) 1187
SapI GCTCTTC 1 cut(s) 962
SaqAI TTAA 1 cut(s) 1266
SatI GCNGC 8 cut(s) 483, 505, 508, 551, 717, 775, 1181, 1200
Sau3AI GATC 4 cut(s) 3, 16, 69, 849
Sau96I GGNCC 7 cut(s) 112, 176, 749, 750, 828, 1048, 1288
SchI GAGTC 3 cut(s) 199, 597, 870
ScrFI CCNGG 8 cut(s) 668, 684, 826, 887, 1046, 1086, 1151, 1213
SduI GDGCHC 4 cut(s) 675, 683, 753, 1020
SexAI ACCWGGT 1 cut(s) 1211
SfaNI GCATC 2 cut(s) 696, 1294
SfiI GGCCNNNNNGGCC 1 cut(s) 175
SfuI TTCGAA 1 cut(s) 448
SgrAI CRCCGGYG 1 cut(s) 626
SinI GGWCC 2 cut(s) 1048, 1288
SmiMI CAYNNNNRTG 2 cut(s) 737, 1160
SmlI CTYRAG 1 cut(s) 793
SmoI CTYRAG 1 cut(s) 793
Sse9I AATT 1 cut(s) 119
SspMI CTAG 3 cut(s) 90, 125, 1130
SstI GAGCTC 1 cut(s) 675
StyD4I CCNGG 8 cut(s) 666, 682, 824, 885, 1044, 1084, 1149, 1211
StyI CCWWGG 3 cut(s) 83, 343, 1155
TaaI ACNGT 1 cut(s) 59
TaiI ACGT 4 cut(s) 32, 645, 680, 885
TaqI TCGA 7 cut(s) 448, 544, 639, 810, 1095, 1188, 1311
TasI AATT 1 cut(s) 119
TatI WGTACW 1 cut(s) 1104
TauI GCSGC 6 cut(s) 507, 510, 719, 777, 1183, 1202
TfiI GAWTC 1 cut(s) 924
Tru1I TTAA 1 cut(s) 1266
Tru9I TTAA 1 cut(s) 1266
TscAI CASTG 4 cut(s) 64, 186, 243, 938
TseFI GTSAC 1 cut(s) 470
TseI GCWGC 2 cut(s) 482, 550
Tsp45I GTSAC 1 cut(s) 470
TspDTI ATGAA 1 cut(s) 342
TspGWI ACGGA 1 cut(s) 450
TspRI CASTG 4 cut(s) 64, 186, 243, 938
Van91I CCANNNNNTGG 2 cut(s) 892, 1156
VpaK11BI GGWCC 2 cut(s) 1048, 1288
XceI RCATGY 3 cut(s) 439, 838, 1105
XmiI GTMKAC 1 cut(s) 1188
XspI CTAG 3 cut(s) 90, 125, 1130
ZraI GACGTC 1 cut(s) 643
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.