Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0008494

Physical Location & Seq

Genomic Coordinates Reverse (-)

18865564 .. 18871544

Gene Structure 5981 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00179240.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2301 bp

ATGAAGCCATTTCGTCGATGCCAGAGGATCCTCATCCTCTCTCTGCTTTCGCTCTCTGTTTTCGCTCCAATCCTCTTCGTCTCCCACAGGCTCAAGAATCTCACCTATACTGGGCGGAAGGAATTCATTGAAGATTTATCCAATGTTAAATACAGGGCTGATACTTTGAAGCTTAGTGCTGTTGAGCAGGAAGCCGGTGAAGGTTTGAAAGAGCCCAGGAAAGTTTTGTATGAAGATAAGGATGTAGTTTATTCGGTTAGTTACAGTCTTGGTGAGAATCAAGATGGTAAGGAATCCGGAAATGTTGGAGACATTACTGATACGGCGGAAAGAATGGAAAATGGAACCAATAATGAGAGCAAAGAAGGAGATATACAATTTCAGCAGAGAGAAATATCATCTGCATCTGGTGAAAAGGGGCAAATTAACCAAGCATTGGTCCAACATGAACAGAATGAACAATCTCAGTCAAGGAAAGTAATAGAACAGAGAATAAAAGAGATGAAAGATGTAAAATCAAATCATCCCGTTCAAAAAGTGAATTCAAATATCCGGAGAGTGGGAGACAAGATAAATGAGATGAAAGATCAGATGATTAGAGCTAAAGCATACATGACTTTTGCACCACCTAATTCACAGTTGGTGAAGGAGTTGAGACTGCGAACTAAAGAGGTGGAACGTGTGGTTGGTAGAATCCACAAGGATTCTGATTTATCTCGGAGTGCTTTGCAGAAAATGAGAAACTTGGAGGCCTCACTATCCAAAGCCAGCCGTGCTTTCCCAGACTGCTCTGCCATGGCCACAAAACTACGTTCTATGACTCACAGTGCTGAAGAGCAAGTTGGGTTGCAGAAGAAGCAAGTCACATTTCTTTATCACCTTGCTGGAAGCACTACCCCGAAAGGTCTTCATTGTCTTTCTATGCAGCTGACTGCAGAGTACTTTGCTCTGGATTCCGAGGAGAGGCAATTTCCTAACCAACACAAGTTGCATGATCCACAGCTCTACCATTATGCTGTCTTTTCCGACAATGTTCTGGCATGTGCAGTGGTTGTGAACTCCACTGTTTCCACTGCCATGGAACCAGAGAAGATTGTTTTCCATGTGGTGACTGATTCACTCAATTTTCCAGCATTGTCAATGTGGTTCTTGTTGAATCCTCCTGGAAAAGCCACTATCCAAGTCCAGAGCATAGAGAGTTTTGAATGGTTGTCTACCAAGTATAAAAGACCATTAATTCAGAAGTCCACTGACCCTAGATATGCTTCTGAACTCAACCACCTCCGTTTCTATCTGCCTGATATCTTCCCTGCACTGAATAAGATCGTGCTATTTGACCATGATGTCGTAGTTCAAAGGGATCTATCTAGACTGTGGAGTGTTAATATGAAGGGGAAAGTCAATGGTGCAGTTGAGACTTGCCGGGATAATGAACCATCATTTTTACAGATGGATAAATTTATCAACTTCTCAGATCCATATGTGGCAAATAGGTTTGATGTCAAAGCATGCACATGGGCATTTGGCATGAATTTGTTCGATCTTCAAAATTGGAGGAGGCATAAGCTAACTACTCTATACCATAAATACATGCAATTGGGTTCTAAGAAGCCATTGTGGGTGGCTGGGAGTTTGCCTTTAGGTTGGGTCACCTTCTATAACCGGACAGTGGCTTTGGACAGGCGATGGCATGCTCTCGGGCTGGGTTATGACTCTGGTGTGGTTCAGGGCGATGTGGACCGGGCAGCAGTGATACATTATGATGGAATTATGAAGCCGTGGTTAGATATTGCGATTGGGAGGTACAAGGGGCTAGAGTGCAACTTCTGTCCTAGAATCAGTTTCACTGCAGATCTCTCTCTCACCAATTCTCTTTGGACATTGAAGATAATGGCCTCCTTCACAGCTAGCACTCCCACCTCATCTCTCACCAGGGCAGCCCTTGTGCACAAGCCGTCTGTTGGGGCTCCATCCTCAACTATTCTAGCTTTGCCATCAATTGGAAACAAGGGAAAGGTGAGATGTTCAGTGGAGGCAAAGCCCCCAATGAAGAAGAGCAACTCAAACATTGGGATGAGTGCATCTCTGGTAGCTGCAGCTTTGGCTGCAACCATGTCAAGCCCAGCAGCCATGGCTTTGGTGGATGACAGATTGAGCACAGAAGGAACAGGGCTTCCCTTTGGTTTGAGCAACAATCTCCTCGGGTGGATCCTTCTTGGTGTGTTTGGTCTCATCTGGGGACTCTACTTCACCTACACTTCAGATCTTGAAGAGGACGAGGAGTCAGGACTATCCCTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0012505 GO:0016020 GO:0031090 GO:0031984 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0098588 GO:0098791

KEGG Pathways

Metabolic & Signaling

ko00520 map00520

Pfam Domains

Protein Families

Glyco_transf_8

Protein Analysis

766

Amino Acids

86.02

Weight (kDa)

8.93

Isoelectric Point (pI)

44.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GAUT_1	PF25557	190 - 260	4.4e-22	Galacturonosyltransferase domain 1
Glyco_transf_8	PF01501	305 - 598	1.5e-60	Glycosyl transferase family 8
PsbW	PF07123	631 - 766	2.7e-58	Photosystem II reaction centre W protein (PsbW)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008494)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06780 AT1G06780 AT2G30575
fragaria_vesca	FvH4_2g22460 FvH4_2g22460
malus_domestica	MD05G1204900.v1.1 MD10G1192000.v1.1
prunus_persica	Prupe.8G231500_v2.0.a1 Prupe.8G231500_v2.0.a1
pyrus_communis	pycom05g19110 pycom10g16590
rosa_chinensis	RchiOBHm_Chr6g0289401
rosa_laevigata	RLG00000012307
rosa_multiflora	Rmu_co8414935.1_g000001
rosa_roxburghii	Rroxscaffold_7G00179240
rosa_rugosa	Rorug06G0203100 Rorug06G0203200 Rorug06G0203300
rosa_samantha	Rh6AG314200 Rh6BG321800 Rh6CG328000 Rh6DG313700
rosa_wichuraiana	Rw6G027160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1343
AccB7I	CCANNNNNTGG	2 cut(s)	436, 2000
AccI	GTMKAC	1 cut(s)	1214
AccIII	TCCGGA	2 cut(s)	296, 552
AciI	CCGC	2 cut(s)	115, 326
AclWI	GGATC	7 cut(s)	22, 35, 989, 1368, 1469, 2203, 2216
AcoI	YGGCCR	1 cut(s)	798
AcsI	RAATTY	4 cut(s)	122, 541, 1457, 1531
AcuI	CTGAAG	2 cut(s)	852, 2244
AfaI	GTAC	2 cut(s)	941, 1805
AfiI	CCNNNNNNNGG	7 cut(s)	111, 436, 559, 963, 1669, 1961, 2000
AflIII	ACRYGT	1 cut(s)	679
AhdI	GACNNNNNGTC	1 cut(s)	2281
AjnI	CCWGG	3 cut(s)	215, 1162, 1931
AjuI	GAANNNNNNNTTGG	4 cut(s)	669, 701, 825, 857
AloI	GAACNNNNNNTCC	2 cut(s)	2158, 2190
AluBI	AGCT	9 cut(s)	172, 602, 928, 1003, 1567, 1907, 1988, 2093, 2099
AluI	AGCT	9 cut(s)	172, 602, 928, 1003, 1567, 1907, 1988, 2093, 2099
Alw21I	GWGCWC	2 cut(s)	1950, 2159
Alw26I	GTCTC	6 cut(s)	85, 303, 558, 649, 1409, 2234
Alw44I	GTGCAC	1 cut(s)	1946
AlwI	GGATC	7 cut(s)	22, 35, 989, 1368, 1469, 2203, 2216
Ama87I	CYCGRG	2 cut(s)	1697, 2201
Aor13HI	TCCGGA	2 cut(s)	296, 552
AoxI	GGCC	3 cut(s)	750, 798, 1893
ApaLI	GTGCAC	1 cut(s)	1946
ApeKI	GCWGC	7 cut(s)	925, 1745, 1937, 2093, 2096, 2105, 2126
ApoI	RAATTY	4 cut(s)	122, 541, 1457, 1531
ArsI	GACNNNNNNTTYG	2 cut(s)	1657, 1689
AseI	ATTAAT	1 cut(s)	1235
Asp700I	GAANNNNTTC	2 cut(s)	122, 1535
AspS9I	GGNCC	2 cut(s)	439, 1738
AsuC2I	CCSGG	2 cut(s)	1424, 1742
AsuNHI	GCTAGC	1 cut(s)	1907
AvaI	CYCGRG	2 cut(s)	1697, 2201
AvaII	GGWCC	2 cut(s)	439, 1738
BaeGI	GKGCMC	1 cut(s)	1950
BalI	TGGCCA	1 cut(s)	800
BamHI	GGATCC	2 cut(s)	27, 2208
BanII	GRGCYC	2 cut(s)	216, 1969
BarI	GAAGNNNNNNTAC	2 cut(s)	357, 389
BbsI	GAAGAC	1 cut(s)	899
Bbv12I	GWGCWC	2 cut(s)	1950, 2159
BbvI	GCAGC	7 cut(s)	937, 1757, 1949, 2080, 2092, 2108, 2138
BccI	CCATC	7 cut(s)	278, 1444, 1444, 1680, 1757, 1978, 2002
BceAI	ACGGC	4 cut(s)	339, 756, 1762, 1939
BciT130I	CCWGG	3 cut(s)	217, 1164, 1933
BcnI	CCSGG	2 cut(s)	1424, 1742
BcoDI	GTCTC	6 cut(s)	85, 303, 558, 649, 1409, 2234
BfaI	CTAG	7 cut(s)	1257, 1368, 1814, 1833, 1908, 1985, 2299
BfmI	CTRYAG	3 cut(s)	933, 1848, 2094
BglII	AGATCT	2 cut(s)	1852, 2263
BisI	GCNGC	7 cut(s)	926, 1746, 1938, 2094, 2097, 2106, 2127
BlsI	GCNGC	7 cut(s)	927, 1747, 1939, 2095, 2098, 2107, 2128
BmcAI	AGTACT	1 cut(s)	941
Bme1390I	CCNGG	5 cut(s)	217, 1164, 1424, 1742, 1933
Bme18I	GGWCC	2 cut(s)	439, 1738
BmeRI	GACNNNNNGTC	1 cut(s)	2281
BmeT110I	CYCGRG	2 cut(s)	1697, 2201
BmgT120I	GGNCC	2 cut(s)	439, 1738
BmiI	GGNNCC	5 cut(s)	29, 346, 1083, 1968, 2210
BmrFI	CCNGG	5 cut(s)	217, 1164, 1424, 1742, 1933
BmrI	ACTGGG	1 cut(s)	120
BmsI	GCATC	3 cut(s)	8, 413, 2090
BmtI	GCTAGC	1 cut(s)	1911
BmuI	ACTGGG	1 cut(s)	120
BpiI	GAAGAC	1 cut(s)	899
BplI	GAGNNNNNCTC	2 cut(s)	2068, 2100
BpuEI	CTTGAG	1 cut(s)	77
BpuMI	CCSGG	2 cut(s)	1424, 1742
BsaBI	GATNNNNATC	1 cut(s)	32
BsaI	GGTCTC	1 cut(s)	2234
BsaJI	CCNNGG	8 cut(s)	215, 795, 957, 1077, 1778, 1932, 2130, 2200
BsaWI	WCCGGW	3 cut(s)	296, 552, 1662
Bsc4I	CCNNNNNNNGG	7 cut(s)	111, 436, 559, 963, 1669, 1961, 2000
Bse118I	RCCGGY	1 cut(s)	194
Bse1I	ACTGG	1 cut(s)	115
Bse8I	GATNNNNATC	1 cut(s)	32
BseAI	TCCGGA	2 cut(s)	296, 552
BseBI	CCWGG	3 cut(s)	217, 1164, 1933
BseDI	CCNNGG	8 cut(s)	215, 795, 957, 1077, 1778, 1932, 2130, 2200
BseGI	GGATG	6 cut(s)	33, 247, 523, 1970, 2079, 2149
BseJI	GATNNNNATC	1 cut(s)	32
BseLI	CCNNNNNNNGG	7 cut(s)	111, 436, 559, 963, 1669, 1961, 2000
BseMII	CTCAG	2 cut(s)	479, 1485
BseNI	ACTGG	1 cut(s)	115
BseRI	GAGGAG	4 cut(s)	974, 1570, 2189, 2294
BseSI	GKGCMC	1 cut(s)	1950
BseXI	GCAGC	7 cut(s)	937, 1757, 1949, 2080, 2092, 2108, 2138
BseYI	CCCAGC	3 cut(s)	1625, 1702, 2122
BsgI	GTGCAG	3 cut(s)	1065, 1296, 1428
BshFI	GGCC	3 cut(s)	752, 800, 1895
BsiHKAI	GWGCWC	2 cut(s)	1950, 2159
BsiHKCI	CYCGRG	2 cut(s)	1697, 2201
BsiSI	CCGG	6 cut(s)	195, 297, 553, 1423, 1663, 1741
BslFI	GGGAC	1 cut(s)	2253
BslI	CCNNNNNNNGG	7 cut(s)	111, 436, 559, 963, 1669, 1961, 2000
BsmAI	GTCTC	6 cut(s)	85, 303, 558, 649, 1409, 2234
BsmBI	CGTCTC	1 cut(s)	85
BsmFI	GGGAC	1 cut(s)	2253
BsnI	GGCC	3 cut(s)	752, 800, 1895
Bso31I	GGTCTC	1 cut(s)	2234
BsoBI	CYCGRG	2 cut(s)	1697, 2201
Bsp1286I	GDGCHC	4 cut(s)	216, 1950, 1969, 2159
Bsp13I	TCCGGA	2 cut(s)	296, 552
Bsp19I	CCATGG	3 cut(s)	795, 1077, 2130
BspACI	CCGC	2 cut(s)	115, 326
BspANI	GGCC	3 cut(s)	752, 800, 1895
BspCNI	CTCAG	2 cut(s)	478, 1484
BspEI	TCCGGA	2 cut(s)	296, 552
BspLI	GGNNCC	5 cut(s)	29, 346, 1083, 1968, 2210
BspMAI	CTGCAG	3 cut(s)	937, 1852, 2098
BspOI	GCTAGC	1 cut(s)	1911
BspPI	GGATC	7 cut(s)	22, 35, 989, 1368, 1469, 2203, 2216
BspQI	GCTCTTC	2 cut(s)	828, 2048
BspTNI	GGTCTC	1 cut(s)	2234
BsrFI	RCCGGY	1 cut(s)	194
BsrI	ACTGG	1 cut(s)	115
BssAI	RCCGGY	1 cut(s)	194
BssECI	CCNNGG	8 cut(s)	215, 795, 957, 1077, 1778, 1932, 2130, 2200
BssT1I	CCWWGG	3 cut(s)	795, 1077, 2130
Bst2UI	CCWGG	3 cut(s)	217, 1164, 1933
Bst4CI	ACNGT	6 cut(s)	266, 639, 827, 1066, 1374, 1669
Bst6I	CTCTTC	4 cut(s)	80, 828, 2048, 2265
BstC8I	GCNNGC	4 cut(s)	769, 1510, 1692, 1909
BstDEI	CTNAG	4 cut(s)	173, 465, 1471, 1605
BstDSI	CCRYGG	4 cut(s)	795, 1077, 1778, 2130
BstEII	GGTNACC	1 cut(s)	1648
BstF5I	GGATG	6 cut(s)	33, 247, 523, 1970, 2079, 2149
BstMAI	GTCTC	6 cut(s)	85, 303, 558, 649, 1409, 2234
BstMWI	GCNNNNNNNGC	5 cut(s)	773, 856, 2102, 2105, 2132
BstNI	CCWGG	3 cut(s)	217, 1164, 1933
BstNSI	RCATGY	4 cut(s)	1044, 1512, 1594, 1694
BstPI	GGTNACC	1 cut(s)	1648
BstSCI	CCNGG	5 cut(s)	215, 1162, 1422, 1740, 1931
BstSFI	CTRYAG	3 cut(s)	933, 1848, 2094
BstSLI	GKGCMC	1 cut(s)	1950
BstV1I	GCAGC	7 cut(s)	937, 1757, 1949, 2080, 2092, 2108, 2138
BstV2I	GAAGAC	1 cut(s)	899
BstX2I	RGATCY	6 cut(s)	27, 1360, 1474, 1852, 2208, 2263
BstXI	CCANNNNNNTGG	2 cut(s)	1078, 2137
BstYI	RGATCY	6 cut(s)	27, 1360, 1474, 1852, 2208, 2263
BsuRI	GGCC	3 cut(s)	752, 800, 1895
BtgI	CCRYGG	4 cut(s)	795, 1077, 1778, 2130
BtgZI	GCGATG	2 cut(s)	1699, 1746
BtsCI	GGATG	6 cut(s)	33, 247, 523, 1970, 2079, 2149
BtsI	GCAGTG	4 cut(s)	1053, 1071, 1755, 1845
Cac8I	GCNNGC	4 cut(s)	769, 1510, 1692, 1909
Cfr10I	RCCGGY	1 cut(s)	194
Cfr13I	GGNCC	2 cut(s)	439, 1738
Csp6I	GTAC	2 cut(s)	940, 1804
CviQI	GTAC	2 cut(s)	940, 1804
DdeI	CTNAG	4 cut(s)	173, 465, 1471, 1605
DrdI	GACNNNNNNGTC	1 cut(s)	1343
DriI	GACNNNNNGTC	1 cut(s)	2281
DseDI	GACNNNNNNGTC	1 cut(s)	1343
EaeI	YGGCCR	1 cut(s)	798
Eam1104I	CTCTTC	4 cut(s)	80, 828, 2048, 2265
Eam1105I	GACNNNNNGTC	1 cut(s)	2281
EarI	CTCTTC	4 cut(s)	80, 828, 2048, 2265
EciI	GGCGGA	2 cut(s)	130, 341
Eco130I	CCWWGG	3 cut(s)	795, 1077, 2130
Eco147I	AGGCCT	1 cut(s)	752
Eco24I	GRGCYC	2 cut(s)	216, 1969
Eco31I	GGTCTC	1 cut(s)	2234
Eco32I	GATATC	1 cut(s)	1303
Eco47I	GGWCC	2 cut(s)	439, 1738
Eco57I	CTGAAG	2 cut(s)	852, 2244
Eco88I	CYCGRG	2 cut(s)	1697, 2201
Eco91I	GGTNACC	1 cut(s)	1648
EcoO65I	GGTNACC	1 cut(s)	1648
EcoRI	GAATTC	2 cut(s)	122, 541
EcoRII	CCWGG	3 cut(s)	215, 1162, 1931
EcoRV	GATATC	1 cut(s)	1303
EcoT14I	CCWWGG	3 cut(s)	795, 1077, 2130
EcoT38I	GRGCYC	2 cut(s)	216, 1969
ErhI	CCWWGG	3 cut(s)	795, 1077, 2130
Esp3I	CGTCTC	1 cut(s)	85
FaqI	GGGAC	1 cut(s)	2253
FauNDI	CATATG	1 cut(s)	1480
FblI	GTMKAC	1 cut(s)	1214
Fnu4HI	GCNGC	7 cut(s)	926, 1746, 1938, 2094, 2097, 2106, 2127
FokI	GGATG	6 cut(s)	20, 254, 510, 1957, 2086, 2156
FriOI	GRGCYC	2 cut(s)	216, 1969
Fsp4HI	GCNGC	7 cut(s)	926, 1746, 1938, 2094, 2097, 2106, 2127
FspBI	CTAG	7 cut(s)	1257, 1368, 1814, 1833, 1908, 1985, 2299
GluI	GCNGC	7 cut(s)	926, 1746, 1938, 2094, 2097, 2106, 2127
GsaI	CCCAGC	3 cut(s)	1629, 1706, 2126
HaeIII	GGCC	3 cut(s)	752, 800, 1895
HapII	CCGG	6 cut(s)	195, 297, 553, 1423, 1663, 1741
HindIII	AAGCTT	1 cut(s)	170
HpaII	CCGG	6 cut(s)	195, 297, 553, 1423, 1663, 1741
Hpy166II	GTNNAC	5 cut(s)	1057, 1215, 1248, 1738, 1948
Hpy188I	TCNGA	9 cut(s)	591, 709, 720, 958, 1027, 1242, 1270, 1474, 2263
Hpy188III	TCNNGA	9 cut(s)	94, 281, 297, 553, 950, 1186, 1368, 2267, 2286
Hpy8I	GTNNAC	5 cut(s)	1057, 1215, 1248, 1738, 1948
Hpy99I	CGWCG	1 cut(s)	18
HpyAV	CCTTC	9 cut(s)	112, 194, 359, 640, 1384, 1663, 1909, 2156, 2222
HpyCH4III	ACNGT	6 cut(s)	266, 639, 827, 1066, 1374, 1669
HpyCH4IV	ACGT	2 cut(s)	679, 811
HpyF10VI	GCNNNNNNNGC	5 cut(s)	773, 856, 2102, 2105, 2132
HpyF3I	CTNAG	4 cut(s)	173, 465, 1471, 1605
HpySE526I	ACGT	2 cut(s)	679, 811
Kpn2I	TCCGGA	2 cut(s)	296, 552
LguI	GCTCTTC	2 cut(s)	828, 2048
LmnI	GCTCC	2 cut(s)	70, 1972
Lsp1109I	GCAGC	7 cut(s)	937, 1757, 1949, 2080, 2092, 2108, 2138
LweI	GCATC	3 cut(s)	8, 413, 2090
MaeI	CTAG	7 cut(s)	1257, 1368, 1814, 1833, 1908, 1985, 2299
MaeII	ACGT	2 cut(s)	679, 811
MaeIII	GTNAC	4 cut(s)	260, 862, 1108, 1648
MfeI	CAATTG	2 cut(s)	1595, 1998
MflI	RGATCY	6 cut(s)	27, 1360, 1474, 1852, 2208, 2263
MhlI	GDGCHC	4 cut(s)	216, 1950, 1969, 2159
MlsI	TGGCCA	1 cut(s)	800
MluNI	TGGCCA	1 cut(s)	800
MlyI	GAGTC	4 cut(s)	814, 1706, 2235, 2291
MmeI	TCCRAC	3 cut(s)	286, 466, 1050
Mox20I	TGGCCA	1 cut(s)	800
MroI	TCCGGA	2 cut(s)	296, 552
MroXI	GAANNNNTTC	2 cut(s)	122, 1535
MscI	TGGCCA	1 cut(s)	800
MseI	TTAA	4 cut(s)	147, 426, 1235, 1383
MslI	CAYNNNNRTG	4 cut(s)	1076, 1513, 1761, 2072
Msp20I	TGGCCA	1 cut(s)	800
MspA1I	CMGCKG	1 cut(s)	928
MspI	CCGG	6 cut(s)	195, 297, 553, 1423, 1663, 1741
MspR9I	CCNGG	5 cut(s)	217, 1164, 1424, 1742, 1933
MunI	CAATTG	2 cut(s)	1595, 1998
MvaI	CCWGG	3 cut(s)	217, 1164, 1933
MwoI	GCNNNNNNNGC	5 cut(s)	773, 856, 2102, 2105, 2132
NciI	CCSGG	2 cut(s)	1424, 1742
NcoI	CCATGG	3 cut(s)	795, 1077, 2130
NdeI	CATATG	1 cut(s)	1480
NheI	GCTAGC	1 cut(s)	1907
NlaIV	GGNNCC	5 cut(s)	29, 346, 1083, 1968, 2210
NmuCI	GTSAC	3 cut(s)	862, 1108, 1648
NspI	RCATGY	4 cut(s)	1044, 1512, 1594, 1694
PaeI	GCATGC	2 cut(s)	1512, 1694
PceI	AGGCCT	1 cut(s)	752
PciSI	GCTCTTC	2 cut(s)	828, 2048
PdmI	GAANNNNTTC	2 cut(s)	122, 1535
PfeI	GAWTC	9 cut(s)	97, 277, 293, 693, 704, 953, 1115, 1156, 1836
PflMI	CCANNNNNTGG	2 cut(s)	436, 2000
PfoI	TCCNGGA	1 cut(s)	1162
PkrI	GCNGC	7 cut(s)	927, 1747, 1939, 2095, 2098, 2107, 2128
PleI	GAGTC	4 cut(s)	814, 1706, 2235, 2290
PpsI	GAGTC	4 cut(s)	814, 1706, 2235, 2290
PshBI	ATTAAT	1 cut(s)	1235
Psp6I	CCWGG	3 cut(s)	215, 1162, 1931
PspEI	GGTNACC	1 cut(s)	1648
PspFI	CCCAGC	3 cut(s)	1625, 1702, 2122
PspGI	CCWGG	3 cut(s)	215, 1162, 1931
PspN4I	GGNNCC	5 cut(s)	29, 346, 1083, 1968, 2210
PspPI	GGNCC	2 cut(s)	439, 1738
PstI	CTGCAG	3 cut(s)	937, 1852, 2098
PsuI	RGATCY	6 cut(s)	27, 1360, 1474, 1852, 2208, 2263
PvuII	CAGCTG	1 cut(s)	928
RsaI	GTAC	2 cut(s)	941, 1805
RsaNI	GTAC	2 cut(s)	940, 1804
RseI	CAYNNNNRTG	4 cut(s)	1076, 1513, 1761, 2072
SapI	GCTCTTC	2 cut(s)	828, 2048
SaqAI	TTAA	4 cut(s)	147, 426, 1235, 1383
SatI	GCNGC	7 cut(s)	926, 1746, 1938, 2094, 2097, 2106, 2127
Sau96I	GGNCC	2 cut(s)	439, 1738
ScaI	AGTACT	1 cut(s)	941
SchI	GAGTC	4 cut(s)	814, 1706, 2235, 2291
ScrFI	CCNGG	5 cut(s)	217, 1164, 1424, 1742, 1933
SduI	GDGCHC	4 cut(s)	216, 1950, 1969, 2159
SfaNI	GCATC	3 cut(s)	8, 413, 2090
SfcI	CTRYAG	3 cut(s)	933, 1848, 2094
SinI	GGWCC	2 cut(s)	439, 1738
SmiMI	CAYNNNNRTG	4 cut(s)	1076, 1513, 1761, 2072
SmlI	CTYRAG	1 cut(s)	92
SmoI	CTYRAG	1 cut(s)	92
SphI	GCATGC	2 cut(s)	1512, 1694
SseBI	AGGCCT	1 cut(s)	752
SsiI	CCGC	2 cut(s)	115, 326
SspMI	CTAG	7 cut(s)	1257, 1368, 1814, 1833, 1908, 1985, 2299
StuI	AGGCCT	1 cut(s)	752
StyD4I	CCNGG	5 cut(s)	215, 1162, 1422, 1740, 1931
StyI	CCWWGG	3 cut(s)	795, 1077, 2130
TaaI	ACNGT	6 cut(s)	266, 639, 827, 1066, 1374, 1669
TaiI	ACGT	2 cut(s)	682, 814
TaqI	TCGA	2 cut(s)	16, 1539
TatI	WGTACW	1 cut(s)	939
TfiI	GAWTC	9 cut(s)	97, 277, 293, 693, 704, 953, 1115, 1156, 1836
Tru1I	TTAA	4 cut(s)	147, 426, 1235, 1383
Tru9I	TTAA	4 cut(s)	147, 426, 1235, 1383
TseFI	GTSAC	3 cut(s)	862, 1108, 1648
TseI	GCWGC	7 cut(s)	925, 1745, 1937, 2093, 2096, 2105, 2126
Tsp45I	GTSAC	3 cut(s)	862, 1108, 1648
TspGWI	ACGGA	1 cut(s)	1274
Van91I	CCANNNNNTGG	2 cut(s)	436, 2000
VneI	GTGCAC	1 cut(s)	1946
VpaK11BI	GGWCC	2 cut(s)	439, 1738
VspI	ATTAAT	1 cut(s)	1235
XapI	RAATTY	4 cut(s)	122, 541, 1457, 1531
XbaI	TCTAGA	1 cut(s)	1367
XceI	RCATGY	4 cut(s)	1044, 1512, 1594, 1694
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2137
XmiI	GTMKAC	1 cut(s)	1214
XmnI	GAANNNNTTC	2 cut(s)	122, 1535
XspI	CTAG	7 cut(s)	1257, 1368, 1814, 1833, 1908, 1985, 2299
ZrmI	AGTACT	1 cut(s)	941

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.