No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000024950 |
| rosa_roxburghii | Rroxscaffold_3G00266600 Rroxscaffold_7G00204960 |
| rosa_rugosa | Rorug01G0063400 Rorug01G0139500.1 Rorug01G0139900.1 Rorug02G0167400 Rorug05G0092000 Rorug06G0396400 |
| rosa_samantha | Rh1AG316400 Rh2BG022500 Rh4CG269800 Rh4CG293500 Rh5DG263100 Rh6BG293200 Rh6DG138300 Rh7BG053800 Rh7BG379300 Rh7CG247400 Rh7DG403400 |
| rosa_wichuraiana | Rw1G002800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 94, 207 |
| AcsI | RAATTY | 1 cut(s) | 181 |
| AcuI | CTGAAG | 1 cut(s) | 111 |
| AgsI | TTSAA | 4 cut(s) | 70, 115, 179, 226 |
| AluBI | AGCT | 1 cut(s) | 234 |
| AluI | AGCT | 1 cut(s) | 234 |
| ApeKI | GCWGC | 1 cut(s) | 231 |
| ApoI | RAATTY | 1 cut(s) | 181 |
| AsuHPI | GGTGA | 1 cut(s) | 256 |
| BbvI | GCAGC | 1 cut(s) | 243 |
| BfuAI | ACCTGC | 2 cut(s) | 94, 207 |
| BisI | GCNGC | 1 cut(s) | 232 |
| BlsI | GCNGC | 1 cut(s) | 233 |
| BmiI | GGNNCC | 1 cut(s) | 24 |
| BmsI | GCATC | 1 cut(s) | 162 |
| BseGI | GGATG | 1 cut(s) | 177 |
| BseXI | GCAGC | 1 cut(s) | 243 |
| Bsp143I | GATC | 1 cut(s) | 16 |
| BspLI | GGNNCC | 1 cut(s) | 24 |
| BspMI | ACCTGC | 2 cut(s) | 94, 207 |
| BssMI | GATC | 1 cut(s) | 16 |
| Bst4CI | ACNGT | 2 cut(s) | 134, 160 |
| Bst6I | CTCTTC | 1 cut(s) | 70 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 199 |
| BstC8I | GCNNGC | 1 cut(s) | 236 |
| BstF5I | GGATG | 1 cut(s) | 177 |
| BstKTI | GATC | 1 cut(s) | 19 |
| BstMBI | GATC | 1 cut(s) | 16 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 199 |
| BstNSI | RCATGY | 1 cut(s) | 149 |
| BstV1I | GCAGC | 1 cut(s) | 243 |
| BtsCI | GGATG | 1 cut(s) | 177 |
| BtsIMutI | CAGTG | 1 cut(s) | 139 |
| BveI | ACCTGC | 2 cut(s) | 94, 207 |
| Cac8I | GCNNGC | 1 cut(s) | 236 |
| CviAII | CATG | 1 cut(s) | 146 |
| CviJI | RGCY | 1 cut(s) | 234 |
| CviKI_1 | RGCY | 1 cut(s) | 234 |
| DpnI | GATC | 1 cut(s) | 18 |
| DpnII | GATC | 1 cut(s) | 16 |
| Eam1104I | CTCTTC | 1 cut(s) | 70 |
| EarI | CTCTTC | 1 cut(s) | 70 |
| Eco57I | CTGAAG | 1 cut(s) | 111 |
| FaeI | CATG | 1 cut(s) | 149 |
| FaiI | YATR | 3 cut(s) | 12, 147, 156 |
| FatI | CATG | 1 cut(s) | 145 |
| Fnu4HI | GCNGC | 1 cut(s) | 232 |
| FokI | GGATG | 1 cut(s) | 184 |
| Fsp4HI | GCNGC | 1 cut(s) | 232 |
| GluI | GCNGC | 1 cut(s) | 232 |
| Hin1II | CATG | 1 cut(s) | 149 |
| HincII | GTYRAC | 1 cut(s) | 130 |
| HindII | GTYRAC | 1 cut(s) | 130 |
| HinfI | GANTC | 2 cut(s) | 115, 140 |
| HpaI | GTTAAC | 1 cut(s) | 130 |
| HphI | GGTGA | 1 cut(s) | 256 |
| Hpy166II | GTNNAC | 1 cut(s) | 130 |
| Hpy188III | TCNNGA | 1 cut(s) | 26 |
| Hpy8I | GTNNAC | 1 cut(s) | 130 |
| HpyCH4III | ACNGT | 2 cut(s) | 134, 160 |
| HpyCH4V | TGCA | 2 cut(s) | 231, 238 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 199 |
| Hsp92II | CATG | 1 cut(s) | 149 |
| KspAI | GTTAAC | 1 cut(s) | 130 |
| Kzo9I | GATC | 1 cut(s) | 16 |
| LpnPI | CCDG | 6 cut(s) | 5, 39, 99, 154, 203, 212 |
| Lsp1109I | GCAGC | 1 cut(s) | 243 |
| LweI | GCATC | 1 cut(s) | 162 |
| MalI | GATC | 1 cut(s) | 18 |
| MboI | GATC | 1 cut(s) | 16 |
| MboII | GAAGA | 3 cut(s) | 87, 104, 149 |
| MluCI | AATT | 2 cut(s) | 49, 181 |
| MnlI | CCTC | 3 cut(s) | 42, 67, 240 |
| MseI | TTAA | 4 cut(s) | 81, 129, 185, 216 |
| MslI | CAYNNNNRTG | 1 cut(s) | 69 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 199 |
| NdeII | GATC | 1 cut(s) | 16 |
| NlaIII | CATG | 1 cut(s) | 149 |
| NlaIV | GGNNCC | 1 cut(s) | 24 |
| NspI | RCATGY | 1 cut(s) | 149 |
| PfeI | GAWTC | 2 cut(s) | 115, 140 |
| PkrI | GCNGC | 1 cut(s) | 233 |
| PspN4I | GGNNCC | 1 cut(s) | 24 |
| RseI | CAYNNNNRTG | 1 cut(s) | 69 |
| SaqAI | TTAA | 4 cut(s) | 81, 129, 185, 216 |
| SatI | GCNGC | 1 cut(s) | 232 |
| Sau3AI | GATC | 1 cut(s) | 16 |
| SetI | ASST | 6 cut(s) | 34, 59, 88, 201, 236, 251 |
| SfaNI | GCATC | 1 cut(s) | 162 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 69 |
| Sse9I | AATT | 2 cut(s) | 49, 181 |
| TaaI | ACNGT | 2 cut(s) | 134, 160 |
| TasI | AATT | 2 cut(s) | 49, 181 |
| TfiI | GAWTC | 2 cut(s) | 115, 140 |
| Tru1I | TTAA | 4 cut(s) | 81, 129, 185, 216 |
| Tru9I | TTAA | 4 cut(s) | 81, 129, 185, 216 |
| TscAI | CASTG | 1 cut(s) | 139 |
| TseI | GCWGC | 1 cut(s) | 231 |
| TspRI | CASTG | 1 cut(s) | 139 |
| XapI | RAATTY | 1 cut(s) | 181 |
| XceI | RCATGY | 1 cut(s) | 149 |