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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000024950 |
| rosa_roxburghii | Rroxscaffold_3G00266600 Rroxscaffold_7G00204960 |
| rosa_rugosa | Rorug01G0063400 Rorug01G0139500.1 Rorug01G0139900.1 Rorug02G0167400 Rorug05G0092000 Rorug06G0396400 |
| rosa_samantha | Rh1AG316400 Rh2BG022500 Rh4CG269800 Rh4CG293500 Rh5DG263100 Rh6BG293200 Rh6DG138300 Rh7BG053800 Rh7BG379300 Rh7CG247400 Rh7DG403400 |
| rosa_wichuraiana | Rw1G002800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 3 cut(s) | 175, 250, 304 |
| AcsI | RAATTY | 3 cut(s) | 70, 392, 452 |
| AcuI | CTGAAG | 3 cut(s) | 42, 321, 483 |
| AfaI | GTAC | 1 cut(s) | 115 |
| AflIII | ACRYGT | 2 cut(s) | 154, 229 |
| AgsI | TTSAA | 6 cut(s) | 205, 293, 325, 398, 419, 521 |
| AjiI | CACGTC | 1 cut(s) | 155 |
| AluBI | AGCT | 2 cut(s) | 267, 371 |
| AluI | AGCT | 2 cut(s) | 267, 371 |
| AoxI | GGCC | 1 cut(s) | 88 |
| ApoI | RAATTY | 3 cut(s) | 70, 392, 452 |
| BbsI | GAAGAC | 2 cut(s) | 151, 232 |
| BccI | CCATC | 1 cut(s) | 40 |
| BfaI | CTAG | 1 cut(s) | 477 |
| BfmI | CTRYAG | 1 cut(s) | 243 |
| BfuAI | ACCTGC | 3 cut(s) | 175, 250, 304 |
| BmgBI | CACGTC | 1 cut(s) | 155 |
| BmsI | GCATC | 3 cut(s) | 7, 28, 136 |
| BpiI | GAAGAC | 2 cut(s) | 151, 232 |
| Bse1I | ACTGG | 1 cut(s) | 393 |
| Bse3DI | GCAATG | 1 cut(s) | 567 |
| BseMI | GCAATG | 1 cut(s) | 567 |
| BseMII | CTCAG | 1 cut(s) | 461 |
| BseNI | ACTGG | 1 cut(s) | 393 |
| BshFI | GGCC | 1 cut(s) | 90 |
| BsmI | GAATGC | 1 cut(s) | 129 |
| BsnI | GGCC | 1 cut(s) | 90 |
| Bsp143I | GATC | 2 cut(s) | 137, 212 |
| BspANI | GGCC | 1 cut(s) | 90 |
| BspCNI | CTCAG | 1 cut(s) | 460 |
| BspMAI | CTGCAG | 1 cut(s) | 247 |
| BspMI | ACCTGC | 3 cut(s) | 175, 250, 304 |
| BsrDI | GCAATG | 1 cut(s) | 567 |
| BsrI | ACTGG | 1 cut(s) | 393 |
| BssMI | GATC | 2 cut(s) | 137, 212 |
| Bst4CI | ACNGT | 3 cut(s) | 65, 201, 344 |
| Bst6I | CTCTTC | 2 cut(s) | 280, 459 |
| BstDEI | CTNAG | 1 cut(s) | 447 |
| BstKTI | GATC | 2 cut(s) | 140, 215 |
| BstMBI | GATC | 2 cut(s) | 137, 212 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 242 |
| BstNSI | RCATGY | 2 cut(s) | 233, 359 |
| BstSFI | CTRYAG | 1 cut(s) | 243 |
| BstV2I | GAAGAC | 2 cut(s) | 151, 232 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 430 |
| BsuRI | GGCC | 1 cut(s) | 90 |
| BtrI | CACGTC | 1 cut(s) | 155 |
| BtsIMutI | CAGTG | 3 cut(s) | 70, 349, 459 |
| BveI | ACCTGC | 3 cut(s) | 175, 250, 304 |
| Csp6I | GTAC | 1 cut(s) | 114 |
| CviAII | CATG | 4 cut(s) | 82, 230, 356, 551 |
| CviJI | RGCY | 4 cut(s) | 90, 267, 371, 404 |
| CviKI_1 | RGCY | 4 cut(s) | 90, 267, 371, 404 |
| CviQI | GTAC | 1 cut(s) | 114 |
| DdeI | CTNAG | 1 cut(s) | 447 |
| DpnI | GATC | 2 cut(s) | 139, 214 |
| DpnII | GATC | 2 cut(s) | 137, 212 |
| Eam1104I | CTCTTC | 2 cut(s) | 280, 459 |
| EarI | CTCTTC | 2 cut(s) | 280, 459 |
| Eco57I | CTGAAG | 3 cut(s) | 42, 321, 483 |
| EcoT22I | ATGCAT | 1 cut(s) | 129 |
| FaeI | CATG | 4 cut(s) | 85, 233, 359, 554 |
| FaiI | YATR | 6 cut(s) | 78, 83, 231, 357, 366, 552 |
| FatI | CATG | 4 cut(s) | 81, 229, 355, 550 |
| FspBI | CTAG | 1 cut(s) | 477 |
| HaeIII | GGCC | 1 cut(s) | 90 |
| Hin1II | CATG | 4 cut(s) | 85, 233, 359, 554 |
| HincII | GTYRAC | 1 cut(s) | 340 |
| HindII | GTYRAC | 1 cut(s) | 340 |
| HinfI | GANTC | 1 cut(s) | 325 |
| HpaI | GTTAAC | 1 cut(s) | 340 |
| Hpy166II | GTNNAC | 2 cut(s) | 340, 347 |
| Hpy188I | TCNGA | 2 cut(s) | 271, 587 |
| Hpy188III | TCNNGA | 5 cut(s) | 35, 141, 216, 449, 514 |
| Hpy8I | GTNNAC | 2 cut(s) | 340, 347 |
| HpyAV | CCTTC | 2 cut(s) | 17, 483 |
| HpyCH4III | ACNGT | 3 cut(s) | 65, 201, 344 |
| HpyCH4IV | ACGT | 1 cut(s) | 154 |
| HpyCH4V | TGCA | 5 cut(s) | 41, 127, 170, 245, 560 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 242 |
| HpyF3I | CTNAG | 1 cut(s) | 447 |
| HpySE526I | ACGT | 1 cut(s) | 154 |
| Hsp92II | CATG | 4 cut(s) | 85, 233, 359, 554 |
| KspAI | GTTAAC | 1 cut(s) | 340 |
| Kzo9I | GATC | 2 cut(s) | 137, 212 |
| LpnPI | CCDG | 6 cut(s) | 180, 255, 309, 374, 434, 499 |
| LweI | GCATC | 3 cut(s) | 7, 28, 136 |
| MaeI | CTAG | 1 cut(s) | 477 |
| MaeII | ACGT | 1 cut(s) | 154 |
| MaeIII | GTNAC | 3 cut(s) | 157, 247, 457 |
| MalI | GATC | 2 cut(s) | 139, 214 |
| MboI | GATC | 2 cut(s) | 137, 212 |
| MboII | GAAGA | 9 cut(s) | 147, 156, 222, 237, 297, 314, 476, 502, 533 |
| MluCI | AATT | 4 cut(s) | 70, 392, 452, 469 |
| MmeI | TCCRAC | 1 cut(s) | 565 |
| MnlI | CCTC | 4 cut(s) | 80, 112, 172, 212 |
| Mph1103I | ATGCAT | 1 cut(s) | 129 |
| MseI | TTAA | 3 cut(s) | 339, 426, 575 |
| MslI | CAYNNNNRTG | 3 cut(s) | 354, 428, 555 |
| Mva1269I | GAATGC | 1 cut(s) | 129 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 242 |
| NdeII | GATC | 2 cut(s) | 137, 212 |
| NlaIII | CATG | 4 cut(s) | 85, 233, 359, 554 |
| NmuCI | GTSAC | 1 cut(s) | 457 |
| NsiI | ATGCAT | 1 cut(s) | 129 |
| NspI | RCATGY | 2 cut(s) | 233, 359 |
| PciI | ACATGT | 1 cut(s) | 229 |
| PctI | GAATGC | 1 cut(s) | 129 |
| PfeI | GAWTC | 1 cut(s) | 325 |
| PscI | ACATGT | 1 cut(s) | 229 |
| PstI | CTGCAG | 1 cut(s) | 247 |
| RsaI | GTAC | 1 cut(s) | 115 |
| RsaNI | GTAC | 1 cut(s) | 114 |
| RseI | CAYNNNNRTG | 3 cut(s) | 354, 428, 555 |
| SaqAI | TTAA | 3 cut(s) | 339, 426, 575 |
| Sau3AI | GATC | 2 cut(s) | 137, 212 |
| SetI | ASST | 9 cut(s) | 28, 157, 169, 244, 269, 298, 373, 417, 432 |
| SfaNI | GCATC | 3 cut(s) | 7, 28, 136 |
| SfcI | CTRYAG | 1 cut(s) | 243 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 354, 428, 555 |
| Sse9I | AATT | 4 cut(s) | 70, 392, 452, 469 |
| SspMI | CTAG | 1 cut(s) | 477 |
| TaaI | ACNGT | 3 cut(s) | 65, 201, 344 |
| TaiI | ACGT | 1 cut(s) | 157 |
| TasI | AATT | 4 cut(s) | 70, 392, 452, 469 |
| TfiI | GAWTC | 1 cut(s) | 325 |
| Tru1I | TTAA | 3 cut(s) | 339, 426, 575 |
| Tru9I | TTAA | 3 cut(s) | 339, 426, 575 |
| TscAI | CASTG | 3 cut(s) | 70, 349, 466 |
| TseFI | GTSAC | 1 cut(s) | 457 |
| Tsp45I | GTSAC | 1 cut(s) | 457 |
| TspDTI | ATGAA | 3 cut(s) | 539, 578, 582 |
| TspRI | CASTG | 3 cut(s) | 70, 349, 466 |
| XapI | RAATTY | 3 cut(s) | 70, 392, 452 |
| XceI | RCATGY | 2 cut(s) | 233, 359 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 98 |
| XspI | CTAG | 1 cut(s) | 477 |
| Zsp2I | ATGCAT | 1 cut(s) | 129 |