U6 snRNA-associated Sm-like protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G03870 AT2G03870 |
| fragaria_vesca | FvH4_7g00800 FvH4_7g00800 |
| malus_domestica | MD02G1314900.v1.1 MD07G1007200.v1.1 |
| prunus_persica | Prupe.2G010100_v2.0.a1 Prupe.2G010100_v2.0.a1 Prupe.2G010100_v2.0.a1 |
| pyrus_communis | pycom02g26390 pycom07g00570 |
| rosa_chinensis | RchiOBHm_Chr1g0314961 |
| rosa_multiflora | Rmu_sc0005168.1_g000014 |
| rosa_roxburghii | Rroxscaffold_4G00331640 |
| rosa_rugosa | Rorug01G0003600 Rorug01G0003700 Rorug01G0003800 Rorug01G0003900 |
| rosa_samantha | Rh1AG014300 Rh1BG006100 Rh1CG012400 Rh1DG007900 |
| rosa_wichuraiana | Rw1G000680 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 338 |
| AclWI | GGATC | 3 cut(s) | 206, 276, 281 |
| AcsI | RAATTY | 1 cut(s) | 26 |
| AfaI | GTAC | 1 cut(s) | 373 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 111 |
| AgsI | TTSAA | 4 cut(s) | 92, 236, 328, 492 |
| AlwI | GGATC | 3 cut(s) | 206, 276, 281 |
| Ama87I | CYCGRG | 1 cut(s) | 37 |
| ApoI | RAATTY | 1 cut(s) | 26 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 96 |
| AvaI | CYCGRG | 1 cut(s) | 37 |
| BfaI | CTAG | 4 cut(s) | 272, 353, 377, 474 |
| BglII | AGATCT | 1 cut(s) | 316 |
| BmcAI | AGTACT | 1 cut(s) | 373 |
| BmeT110I | CYCGRG | 1 cut(s) | 37 |
| BmsI | GCATC | 1 cut(s) | 68 |
| BpuEI | CTTGAG | 2 cut(s) | 143, 320 |
| Bsa29I | ATCGAT | 1 cut(s) | 210 |
| BsaWI | WCCGGW | 1 cut(s) | 15 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 111 |
| BseCI | ATCGAT | 1 cut(s) | 210 |
| BseGI | GGATG | 1 cut(s) | 415 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 111 |
| BseRI | GAGGAG | 1 cut(s) | 402 |
| BshVI | ATCGAT | 1 cut(s) | 210 |
| BsiHKCI | CYCGRG | 1 cut(s) | 37 |
| BsiSI | CCGG | 1 cut(s) | 16 |
| BslFI | GGGAC | 1 cut(s) | 18 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 111 |
| BsmFI | GGGAC | 1 cut(s) | 18 |
| BsoBI | CYCGRG | 1 cut(s) | 37 |
| Bsp143I | GATC | 5 cut(s) | 207, 211, 268, 286, 316 |
| BspACI | CCGC | 1 cut(s) | 338 |
| BspDI | ATCGAT | 1 cut(s) | 210 |
| BspPI | GGATC | 3 cut(s) | 206, 276, 281 |
| BssMI | GATC | 5 cut(s) | 207, 211, 268, 286, 316 |
| BstC8I | GCNNGC | 1 cut(s) | 141 |
| BstDEI | CTNAG | 1 cut(s) | 173 |
| BstF5I | GGATG | 1 cut(s) | 415 |
| BstKTI | GATC | 5 cut(s) | 210, 214, 271, 289, 319 |
| BstMBI | GATC | 5 cut(s) | 207, 211, 268, 286, 316 |
| BstNSI | RCATGY | 1 cut(s) | 143 |
| BstX2I | RGATCY | 2 cut(s) | 268, 316 |
| BstYI | RGATCY | 2 cut(s) | 268, 316 |
| Bsu15I | ATCGAT | 1 cut(s) | 210 |
| BsuTUI | ATCGAT | 1 cut(s) | 210 |
| BtsCI | GGATG | 1 cut(s) | 415 |
| Cac8I | GCNNGC | 1 cut(s) | 141 |
| ClaI | ATCGAT | 1 cut(s) | 210 |
| Csp6I | GTAC | 1 cut(s) | 372 |
| CviAII | CATG | 1 cut(s) | 140 |
| CviJI | RGCY | 6 cut(s) | 121, 298, 391, 406, 427, 448 |
| CviKI_1 | RGCY | 6 cut(s) | 121, 298, 391, 406, 427, 448 |
| CviQI | GTAC | 1 cut(s) | 372 |
| DdeI | CTNAG | 1 cut(s) | 173 |
| DpnI | GATC | 5 cut(s) | 209, 213, 270, 288, 318 |
| DpnII | GATC | 5 cut(s) | 207, 211, 268, 286, 316 |
| Eco88I | CYCGRG | 1 cut(s) | 37 |
| FaeI | CATG | 1 cut(s) | 143 |
| FaiI | YATR | 8 cut(s) | 24, 102, 129, 141, 153, 188, 364, 460 |
| FaqI | GGGAC | 1 cut(s) | 18 |
| FatI | CATG | 1 cut(s) | 139 |
| FokI | GGATG | 1 cut(s) | 402 |
| FspBI | CTAG | 4 cut(s) | 272, 353, 377, 474 |
| HapII | CCGG | 1 cut(s) | 16 |
| Hin1II | CATG | 1 cut(s) | 143 |
| HinfI | GANTC | 2 cut(s) | 97, 236 |
| HpaII | CCGG | 1 cut(s) | 16 |
| Hpy188I | TCNGA | 1 cut(s) | 241 |
| Hpy188III | TCNNGA | 2 cut(s) | 401, 440 |
| HpyAV | CCTTC | 2 cut(s) | 417, 444 |
| HpyCH4V | TGCA | 2 cut(s) | 59, 139 |
| HpyF3I | CTNAG | 1 cut(s) | 173 |
| Hsp92II | CATG | 1 cut(s) | 143 |
| Kzo9I | GATC | 5 cut(s) | 207, 211, 268, 286, 316 |
| LpnPI | CCDG | 2 cut(s) | 29, 294 |
| LweI | GCATC | 1 cut(s) | 68 |
| MaeI | CTAG | 4 cut(s) | 272, 353, 377, 474 |
| MalI | GATC | 5 cut(s) | 209, 213, 270, 288, 318 |
| MboI | GATC | 5 cut(s) | 207, 211, 268, 286, 316 |
| MboII | GAAGA | 3 cut(s) | 239, 269, 326 |
| MflI | RGATCY | 2 cut(s) | 268, 316 |
| MluCI | AATT | 4 cut(s) | 26, 76, 231, 292 |
| MnlI | CCTC | 6 cut(s) | 66, 105, 259, 295, 328, 423 |
| MroXI | GAANNNNTTC | 1 cut(s) | 96 |
| MslI | CAYNNNNRTG | 2 cut(s) | 64, 420 |
| MspI | CCGG | 1 cut(s) | 16 |
| NdeII | GATC | 5 cut(s) | 207, 211, 268, 286, 316 |
| NlaIII | CATG | 1 cut(s) | 143 |
| NspI | RCATGY | 1 cut(s) | 143 |
| PaeI | GCATGC | 1 cut(s) | 143 |
| PdmI | GAANNNNTTC | 1 cut(s) | 96 |
| PfeI | GAWTC | 2 cut(s) | 97, 236 |
| PsuI | RGATCY | 2 cut(s) | 268, 316 |
| RsaI | GTAC | 1 cut(s) | 373 |
| RsaNI | GTAC | 1 cut(s) | 372 |
| RseI | CAYNNNNRTG | 2 cut(s) | 64, 420 |
| Sau3AI | GATC | 5 cut(s) | 207, 211, 268, 286, 316 |
| ScaI | AGTACT | 1 cut(s) | 373 |
| SfaNI | GCATC | 1 cut(s) | 68 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 64, 420 |
| SmlI | CTYRAG | 2 cut(s) | 122, 299 |
| SmoI | CTYRAG | 2 cut(s) | 122, 299 |
| SphI | GCATGC | 1 cut(s) | 143 |
| Sse9I | AATT | 4 cut(s) | 26, 76, 231, 292 |
| SsiI | CCGC | 1 cut(s) | 338 |
| SspI | AATATT | 1 cut(s) | 166 |
| SspMI | CTAG | 4 cut(s) | 272, 353, 377, 474 |
| TaqI | TCGA | 1 cut(s) | 210 |
| TasI | AATT | 4 cut(s) | 26, 76, 231, 292 |
| TatI | WGTACW | 1 cut(s) | 371 |
| TfiI | GAWTC | 2 cut(s) | 97, 236 |
| TspDTI | ATGAA | 5 cut(s) | 39, 89, 203, 261, 351 |
| TspGWI | ACGGA | 1 cut(s) | 272 |
| XapI | RAATTY | 1 cut(s) | 26 |
| XceI | RCATGY | 1 cut(s) | 143 |
| XmnI | GAANNNNTTC | 1 cut(s) | 96 |
| XspI | CTAG | 4 cut(s) | 272, 353, 377, 474 |
| ZrmI | AGTACT | 1 cut(s) | 373 |