Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0007630

Physical Location & Seq

Genomic Coordinates Forward (+)

2946482 .. 2948531

Gene Structure 2050 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0017800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1530 bp

ATGCTATATGCTCAAGCTACTCCGGAAGCTTGTTTTCAGATCAAAAATGTTATACAGACATATGGAAGGGCTTCAGGTCAGGTGGTTAACTTTCATAAAAGCTCTGTTGTGTTTAGTAAGAATGTTGCAGATTGTGAGCAAGATAGAGTGGCTAATCTGTTAGGTGTTGAAGTGGTGGAGTCCCATGAGAGATACTTAGGTCTTCCTACTTACATAGGACGTAAGAAAATAGCTACCTTCCTTTATATAAAGGAGCGGTTAGCTGAAAAACTGAAGCATTGGCAAGGCAAGATGTTGAGTGGTGCTGGTAATGATATTTTGATCAGGGTAGTGGCTCAAGCTCTCCCTAATTATGATATGAGTGTGTTTCAATTGACAAAAAAATTTTGTGAAGATCTTGAGCAGATGTGTGCTAGATTTTGGTGGGGGAGTACAAATGATAAACGTAAAATACATTGGAAGAAATGGGATGATTTGTGTCATGCCAAGGAAGAGGGTGGCTTGGGTTTTCGGAGCTTATCAGAATTTAATTCTTCGATGTTGGCGAAGCAAGCTTGGCGGGTTGTCTCTAACCCGGATACTCTTGTGGCACAATTGTACAAAGCTAGATATTATCCTAATGGTGCTCATTGGCAAATTGGGAATGGAAATAATGTTCTCATGTTGCGGGATTCTTGGATTCCTAAAACTATTACTCATAAACCACAGCTATTGGGACCGGTGCAAGATAATTTGGCCAAGGTGAGTGAATTGATTATTCCTCCTAATTCTTGGGATGAGTATAAAATTCGTTCCACTTTTATACACTCAGATGCAGAAACTATTCTAGCAATTCCTTTGAGTGCTAGAAGTCCGGATGATAGATTGACTTGGCATTTGGGGAAACAAGGTATGTTTACTGTCAAATCTGCATATCGTCATGCTTTCTCTAAAACTGCATCTATTCTTTCTCCTTCTGTTGTGAGTAATCAAAGAGTGTGGAAGAACATTTGGCATGCCAAAATCCCTAGCACGGCAAAGGGAACTAGGAAAATTTTGAAGTGCCAGTGCCCTCCTGTGGGTTGGTTGAAGGTAAATTTTGATGGAGCTTTTAGTCCGAGCTCTGGCAAAGCAGCAATTGGTTTCTTAGTCCGTGACTCTCAAGGGACTTTTTTGGGAGCAGTGGGGAAGGTAGTTACTCGAGTTCAGTCTGCTGAACATGTCGAGCTCTTGGCTTGTAAGGAAGCATTTGGTTATGTGATGGAACATGGTCTATGTCCAGTAATTTTGGAGACTGATTGTTTGGTTTTGAAGCAACAAGTGTGTCAAGAGGAGCTGCAAAATTATTCTATTCTTGGAAGGTTATATGAGGACCTCAGACAAGATTTGAAAGAGGTGAACCAAGTTAGAATTATTCATGCTAGCAGAGAGGCAAACATGGCTGCGCACAAATTGGCAGCTCATGCTGCAGATTTTGATCAAGCTTTCTTTTGGTCTAATATTCCTTCCTTCATTCAAGATGTAATAGAATCTGAGAAATGTATTTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003333 GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0005773 GO:0005774 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006820 GO:0006839 GO:0006865 GO:0008150 GO:0008152 GO:0008509 GO:0008514 GO:0009506 GO:0009507 GO:0009536 GO:0009853 GO:0009987 GO:0015075 GO:0015171 GO:0015318 GO:0015672 GO:0015711 GO:0015849 GO:0016020 GO:0016021 GO:0017077 GO:0019866 GO:0022857 GO:0030054 GO:0031090 GO:0031224 GO:0031966 GO:0031967 GO:0031975 GO:0034220 GO:0043094 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046942 GO:0046943 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071702 GO:0071705 GO:0098588 GO:0098655 GO:0098656 GO:0098660 GO:0098662 GO:0098805 GO:1902600 GO:1903825 GO:1905039 GO:1990542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mito_carr

Protein Analysis

509

Amino Acids

57.49

Weight (kDa)

9.02

Isoelectric Point (pI)

38.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RVT_3	PF13456	359 - 482	6e-23	Reverse transcriptase-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007630)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54110
fragaria_vesca	FvH4_6g12220 FvH4_6g12220 FvH4_6g12220 FvH4_6g12220 FvH4_6g12220
malus_domestica	MD04G1145100.v1.1
prunus_persica	Prupe.6G269400_v2.0.a1
pyrus_communis	pycom04g13130
rosa_chinensis	RchiOBHm_Chr3g0464011
rosa_laevigata	RLG00000013105 RLG00000024728 RLG00000030582
rosa_multiflora	Rmu_co8256601.1_g000001 Rmu_sc0004616.1_g000008
rosa_roxburghii	Rroxscaffold_6G00416060
rosa_rugosa	Rorug01G0017800 Rorug03G0070000 Rorug03G0070100
rosa_samantha	Rh3AG126900 Rh3BG131000 Rh3CG133400 Rh3DG132300
rosa_wichuraiana	Rw3G010720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1425
AccBSI	CCGCTC	1 cut(s)	256
AccIII	TCCGGA	2 cut(s)	22, 853
AciI	CCGC	3 cut(s)	256, 559, 667
AcoI	YGGCCR	1 cut(s)	735
AcsI	RAATTY	5 cut(s)	383, 524, 786, 1032, 1075
AcuI	CTGAAG	2 cut(s)	57, 293
AfaI	GTAC	2 cut(s)	433, 599
AfiI	CCNNNNNNNGG	4 cut(s)	1012, 1057, 1058, 1103
AflIII	ACRYGT	1 cut(s)	1198
AgeI	ACCGGT	1 cut(s)	718
AgsI	TTSAA	7 cut(s)	170, 371, 1039, 1069, 1291, 1369, 1496
AloI	GAACNNNNNNTCC	2 cut(s)	639, 671
Alw21I	GWGCWC	3 cut(s)	628, 1103, 1209
Alw26I	GTCTC	2 cut(s)	571, 1265
Ama87I	CYCGRG	1 cut(s)	1179
Aor13HI	TCCGGA	2 cut(s)	22, 853
AoxI	GGCC	1 cut(s)	735
ApeKI	GCWGC	5 cut(s)	1112, 1315, 1421, 1436, 1445
ApoI	RAATTY	5 cut(s)	383, 524, 786, 1032, 1075
ArsI	GACNNNNNNTTYG	4 cut(s)	859, 891, 1264, 1296
AsiGI	ACCGGT	1 cut(s)	718
Asp700I	GAANNNNTTC	2 cut(s)	70, 822
AspLEI	GCGC	1 cut(s)	1426
AspS9I	GGNCC	2 cut(s)	716, 1351
AsuC2I	CCSGG	1 cut(s)	575
AsuHPI	GGTGA	2 cut(s)	754, 1387
AsuNHI	GCTAGC	1 cut(s)	1400
AvaI	CYCGRG	1 cut(s)	1179
AvaII	GGWCC	2 cut(s)	716, 1351
BaeGI	GKGCMC	1 cut(s)	1052
BaeI	ACNNNNGTAYC	4 cut(s)	184, 217, 570, 603
BalI	TGGCCA	1 cut(s)	737
BanII	GRGCYC	2 cut(s)	1103, 1209
BbsI	GAAGAC	1 cut(s)	194
Bbv12I	GWGCWC	3 cut(s)	628, 1103, 1209
BbvI	GCAGC	5 cut(s)	1124, 1302, 1408, 1432, 1448
BccI	CCATC	2 cut(s)	1076, 1234
BceAI	ACGGC	1 cut(s)	1029
BciVI	GTATCC	1 cut(s)	571
BclI	TGATCA	2 cut(s)	321, 1456
BcnI	CCSGG	1 cut(s)	575
BcoDI	GTCTC	2 cut(s)	571, 1265
BfaI	CTAG	7 cut(s)	414, 606, 827, 846, 1008, 1026, 1401
BfmI	CTRYAG	1 cut(s)	1446
BfuI	GTATCC	1 cut(s)	571
BglII	AGATCT	1 cut(s)	394
BisI	GCNGC	5 cut(s)	1113, 1316, 1422, 1437, 1446
BlsI	GCNGC	5 cut(s)	1114, 1317, 1423, 1438, 1447
Bme1390I	CCNGG	1 cut(s)	575
Bme18I	GGWCC	2 cut(s)	716, 1351
BmeT110I	CYCGRG	1 cut(s)	1179
BmgT120I	GGNCC	2 cut(s)	716, 1351
BmiI	GGNNCC	1 cut(s)	717
BmrFI	CCNGG	1 cut(s)	575
BmsI	GCATC	2 cut(s)	802, 947
BmtI	GCTAGC	1 cut(s)	1404
BpiI	GAAGAC	1 cut(s)	194
BpuEI	CTTGAG	3 cut(s)	321, 419, 1125
BpuMI	CCSGG	1 cut(s)	575
BsaBI	GATNNNNATC	1 cut(s)	1455
BsaJI	CCNNGG	2 cut(s)	486, 738
BsaWI	WCCGGW	3 cut(s)	22, 718, 853
Bsc4I	CCNNNNNNNGG	4 cut(s)	1012, 1057, 1058, 1103
Bse118I	RCCGGY	1 cut(s)	718
Bse1I	ACTGG	2 cut(s)	1045, 1259
Bse8I	GATNNNNATC	1 cut(s)	1455
BseAI	TCCGGA	2 cut(s)	22, 853
BseDI	CCNNGG	2 cut(s)	486, 738
BseGI	GGATG	3 cut(s)	475, 781, 862
BseJI	GATNNNNATC	1 cut(s)	1455
BseLI	CCNNNNNNNGG	4 cut(s)	1012, 1057, 1058, 1103
BseMII	CTCAG	3 cut(s)	822, 1369, 1503
BseNI	ACTGG	2 cut(s)	1045, 1259
BseRI	GAGGAG	1 cut(s)	1325
BseSI	GKGCMC	1 cut(s)	1052
BseXI	GCAGC	5 cut(s)	1124, 1302, 1408, 1432, 1448
BshFI	GGCC	1 cut(s)	737
BshTI	ACCGGT	1 cut(s)	718
BsiHKAI	GWGCWC	3 cut(s)	628, 1103, 1209
BsiHKCI	CYCGRG	1 cut(s)	1179
BsiSI	CCGG	4 cut(s)	23, 575, 719, 854
BslFI	GGGAC	3 cut(s)	166, 729, 1159
BslI	CCNNNNNNNGG	4 cut(s)	1012, 1057, 1058, 1103
BsmAI	GTCTC	2 cut(s)	571, 1265
BsmFI	GGGAC	3 cut(s)	166, 729, 1159
BsnI	GGCC	1 cut(s)	737
BsoBI	CYCGRG	1 cut(s)	1179
Bsp1286I	GDGCHC	4 cut(s)	628, 1052, 1103, 1209
Bsp13I	TCCGGA	2 cut(s)	22, 853
Bsp1407I	TGTACA	1 cut(s)	597
Bsp143I	GATC	4 cut(s)	39, 321, 394, 1456
BspACI	CCGC	3 cut(s)	256, 559, 667
BspANI	GGCC	1 cut(s)	737
BspCNI	CTCAG	3 cut(s)	821, 1368, 1504
BspEI	TCCGGA	2 cut(s)	22, 853
BspLI	GGNNCC	1 cut(s)	717
BspMAI	CTGCAG	1 cut(s)	1450
BspOI	GCTAGC	1 cut(s)	1404
BsrBI	CCGCTC	1 cut(s)	256
BsrFI	RCCGGY	1 cut(s)	718
BsrGI	TGTACA	1 cut(s)	597
BsrI	ACTGG	2 cut(s)	1045, 1259
BssAI	RCCGGY	1 cut(s)	718
BssECI	CCNNGG	2 cut(s)	486, 738
BssMI	GATC	4 cut(s)	39, 321, 394, 1456
BssT1I	CCWWGG	2 cut(s)	486, 738
Bst4CI	ACNGT	1 cut(s)	901
Bst6I	CTCTTC	1 cut(s)	486
BstAPI	GCANNNNNTGC	1 cut(s)	1442
BstAUI	TGTACA	1 cut(s)	597
BstC8I	GCNNGC	3 cut(s)	552, 996, 1402
BstDEI	CTNAG	5 cut(s)	196, 808, 1126, 1355, 1512
BstF5I	GGATG	3 cut(s)	475, 781, 862
BstHHI	GCGC	1 cut(s)	1426
BstKTI	GATC	4 cut(s)	42, 324, 397, 1459
BstMAI	GTCTC	2 cut(s)	571, 1265
BstMBI	GATC	4 cut(s)	39, 321, 394, 1456
BstMWI	GCNNNNNNNGC	5 cut(s)	551, 556, 1418, 1442, 1445
BstNSI	RCATGY	2 cut(s)	998, 1202
BstSCI	CCNGG	1 cut(s)	573
BstSFI	CTRYAG	1 cut(s)	1446
BstSLI	GKGCMC	1 cut(s)	1052
BstV1I	GCAGC	5 cut(s)	1124, 1302, 1408, 1432, 1448
BstV2I	GAAGAC	1 cut(s)	194
BstX2I	RGATCY	1 cut(s)	394
BstYI	RGATCY	1 cut(s)	394
BsuI	GTATCC	1 cut(s)	571
BsuRI	GGCC	1 cut(s)	737
BtsCI	GGATG	3 cut(s)	475, 781, 862
BtsI	GCAGTG	1 cut(s)	1167
BtsIMutI	CAGTG	2 cut(s)	1052, 1167
Cac8I	GCNNGC	3 cut(s)	552, 996, 1402
CfoI	GCGC	1 cut(s)	1426
Cfr10I	RCCGGY	1 cut(s)	718
Cfr13I	GGNCC	2 cut(s)	716, 1351
Csp6I	GTAC	2 cut(s)	432, 598
CspAI	ACCGGT	1 cut(s)	718
CspCI	CAANNNNNGTGG	4 cut(s)	693, 728, 959, 994
CviQI	GTAC	2 cut(s)	432, 598
DdeI	CTNAG	5 cut(s)	196, 808, 1126, 1355, 1512
DpnI	GATC	4 cut(s)	41, 323, 396, 1458
DpnII	GATC	4 cut(s)	39, 321, 394, 1456
EaeI	YGGCCR	1 cut(s)	735
Eam1104I	CTCTTC	1 cut(s)	486
EarI	CTCTTC	1 cut(s)	486
Ecl136II	GAGCTC	2 cut(s)	1101, 1207
Eco130I	CCWWGG	2 cut(s)	486, 738
Eco24I	GRGCYC	2 cut(s)	1103, 1209
Eco47I	GGWCC	2 cut(s)	716, 1351
Eco53kI	GAGCTC	2 cut(s)	1101, 1207
Eco57I	CTGAAG	2 cut(s)	57, 293
Eco88I	CYCGRG	1 cut(s)	1179
EcoICRI	GAGCTC	2 cut(s)	1101, 1207
EcoO109I	RGGNCCY	1 cut(s)	1351
EcoT14I	CCWWGG	2 cut(s)	486, 738
EcoT38I	GRGCYC	2 cut(s)	1103, 1209
ErhI	CCWWGG	2 cut(s)	486, 738
FaqI	GGGAC	3 cut(s)	166, 729, 1159
FauI	CCCGC	2 cut(s)	552, 660
FauNDI	CATATG	1 cut(s)	61
FbaI	TGATCA	2 cut(s)	321, 1456
Fnu4HI	GCNGC	5 cut(s)	1113, 1316, 1422, 1437, 1446
FokI	GGATG	3 cut(s)	482, 788, 869
FriOI	GRGCYC	2 cut(s)	1103, 1209
Fsp4HI	GCNGC	5 cut(s)	1113, 1316, 1422, 1437, 1446
FspBI	CTAG	7 cut(s)	414, 606, 827, 846, 1008, 1026, 1401
FspI	TGCGCA	1 cut(s)	1425
GlaI	GCGC	1 cut(s)	1425
GluI	GCNGC	5 cut(s)	1113, 1316, 1422, 1437, 1446
HaeIII	GGCC	1 cut(s)	737
HapII	CCGG	4 cut(s)	23, 575, 719, 854
HhaI	GCGC	1 cut(s)	1426
Hin6I	GCGC	1 cut(s)	1424
HinP1I	GCGC	1 cut(s)	1424
HincII	GTYRAC	1 cut(s)	88
HindII	GTYRAC	1 cut(s)	88
HindIII	AAGCTT	3 cut(s)	27, 552, 1461
HinfI	GANTC	5 cut(s)	179, 671, 679, 1136, 1508
HpaI	GTTAAC	1 cut(s)	88
HpaII	CCGG	4 cut(s)	23, 575, 719, 854
HphI	GGTGA	2 cut(s)	754, 1387
Hpy166II	GTNNAC	3 cut(s)	88, 897, 1378
Hpy188I	TCNGA	7 cut(s)	39, 513, 523, 811, 1098, 1358, 1513
Hpy188III	TCNNGA	5 cut(s)	23, 398, 854, 1307, 1496
Hpy8I	GTNNAC	3 cut(s)	88, 897, 1378
HpyAV	CCTTC	8 cut(s)	60, 247, 963, 1063, 1162, 1332, 1494, 1498
HpyCH4III	ACNGT	1 cut(s)	901
HpyCH4IV	ACGT	2 cut(s)	220, 445
HpyCH4V	TGCA	7 cut(s)	128, 724, 815, 911, 938, 1318, 1448
HpyF10VI	GCNNNNNNNGC	5 cut(s)	551, 556, 1418, 1442, 1445
HpyF3I	CTNAG	5 cut(s)	196, 808, 1126, 1355, 1512
HpySE526I	ACGT	2 cut(s)	220, 445
HspAI	GCGC	1 cut(s)	1424
Kpn2I	TCCGGA	2 cut(s)	22, 853
Ksp22I	TGATCA	2 cut(s)	321, 1456
KspAI	GTTAAC	1 cut(s)	88
Kzo9I	GATC	4 cut(s)	39, 321, 394, 1456
LmnI	GCTCC	5 cut(s)	253, 513, 1085, 1157, 1312
Lsp1109I	GCAGC	5 cut(s)	1124, 1302, 1408, 1432, 1448
LweI	GCATC	2 cut(s)	802, 947
MaeI	CTAG	7 cut(s)	414, 606, 827, 846, 1008, 1026, 1401
MaeII	ACGT	2 cut(s)	220, 445
MaeIII	GTNAC	2 cut(s)	1133, 1174
MalI	GATC	4 cut(s)	41, 323, 396, 1458
MbiI	CCGCTC	1 cut(s)	256
MboI	GATC	4 cut(s)	39, 321, 394, 1456
MboII	GAAGA	6 cut(s)	194, 404, 472, 503, 525, 994
MfeI	CAATTG	3 cut(s)	371, 593, 1116
MflI	RGATCY	1 cut(s)	394
MhlI	GDGCHC	4 cut(s)	628, 1052, 1103, 1209
MlsI	TGGCCA	1 cut(s)	737
MluNI	TGGCCA	1 cut(s)	737
MlyI	GAGTC	2 cut(s)	188, 1130
MnlI	CCTC	8 cut(s)	487, 771, 1062, 1303, 1342, 1364, 1366, 1402
Mox20I	TGGCCA	1 cut(s)	737
MroI	TCCGGA	2 cut(s)	22, 853
MroXI	GAANNNNTTC	2 cut(s)	70, 822
MscI	TGGCCA	1 cut(s)	737
MseI	TTAA	3 cut(s)	87, 528, 1528
MslI	CAYNNNNRTG	1 cut(s)	810
Msp20I	TGGCCA	1 cut(s)	737
MspI	CCGG	4 cut(s)	23, 575, 719, 854
MspR9I	CCNGG	1 cut(s)	575
MunI	CAATTG	3 cut(s)	371, 593, 1116
MwoI	GCNNNNNNNGC	5 cut(s)	551, 556, 1418, 1442, 1445
NciI	CCSGG	1 cut(s)	575
NdeI	CATATG	1 cut(s)	61
NdeII	GATC	4 cut(s)	39, 321, 394, 1456
NheI	GCTAGC	1 cut(s)	1400
NlaIV	GGNNCC	1 cut(s)	717
NmuCI	GTSAC	1 cut(s)	1133
NsbI	TGCGCA	1 cut(s)	1425
NspI	RCATGY	2 cut(s)	998, 1202
PaeI	GCATGC	1 cut(s)	998
PaeR7I	CTCGAG	1 cut(s)	1179
PciI	ACATGT	1 cut(s)	1198
PcsI	WCGNNNNNNNCGW	1 cut(s)	542
PdmI	GAANNNNTTC	2 cut(s)	70, 822
PfeI	GAWTC	3 cut(s)	671, 679, 1508
PinAI	ACCGGT	1 cut(s)	718
PkrI	GCNGC	5 cut(s)	1114, 1317, 1423, 1438, 1447
PleI	GAGTC	2 cut(s)	187, 1130
PpsI	GAGTC	2 cut(s)	187, 1130
PpuMI	RGGWCCY	1 cut(s)	1351
PscI	ACATGT	1 cut(s)	1198
Psp124BI	GAGCTC	2 cut(s)	1103, 1209
Psp5II	RGGWCCY	1 cut(s)	1351
PspN4I	GGNNCC	1 cut(s)	717
PspPI	GGNCC	2 cut(s)	716, 1351
PspPPI	RGGWCCY	1 cut(s)	1351
PspXI	VCTCGAGB	1 cut(s)	1179
PstI	CTGCAG	1 cut(s)	1450
PsuI	RGATCY	1 cut(s)	394
RsaI	GTAC	2 cut(s)	433, 599
RsaNI	GTAC	2 cut(s)	432, 598
RseI	CAYNNNNRTG	1 cut(s)	810
SacI	GAGCTC	2 cut(s)	1103, 1209
SaqAI	TTAA	3 cut(s)	87, 528, 1528
SatI	GCNGC	5 cut(s)	1113, 1316, 1422, 1437, 1446
Sau3AI	GATC	4 cut(s)	39, 321, 394, 1456
Sau96I	GGNCC	2 cut(s)	716, 1351
SchI	GAGTC	2 cut(s)	188, 1130
ScrFI	CCNGG	1 cut(s)	575
SduI	GDGCHC	4 cut(s)	628, 1052, 1103, 1209
SfaNI	GCATC	2 cut(s)	802, 947
SfcI	CTRYAG	1 cut(s)	1446
Sfr274I	CTCGAG	1 cut(s)	1179
SinI	GGWCC	2 cut(s)	716, 1351
SlaI	CTCGAG	1 cut(s)	1179
SmiMI	CAYNNNNRTG	1 cut(s)	810
SmlI	CTYRAG	5 cut(s)	12, 336, 398, 1140, 1179
SmoI	CTYRAG	5 cut(s)	12, 336, 398, 1140, 1179
SphI	GCATGC	1 cut(s)	998
SsiI	CCGC	3 cut(s)	256, 559, 667
SspI	AATATT	1 cut(s)	1480
SspMI	CTAG	7 cut(s)	414, 606, 827, 846, 1008, 1026, 1401
SstI	GAGCTC	2 cut(s)	1103, 1209
StyD4I	CCNGG	1 cut(s)	573
StyI	CCWWGG	2 cut(s)	486, 738
TaaI	ACNGT	1 cut(s)	901
TaiI	ACGT	2 cut(s)	223, 448
TaqI	TCGA	3 cut(s)	536, 1180, 1203
TatI	WGTACW	2 cut(s)	431, 597
TfiI	GAWTC	3 cut(s)	671, 679, 1508
Tru1I	TTAA	3 cut(s)	87, 528, 1528
Tru9I	TTAA	3 cut(s)	87, 528, 1528
TscAI	CASTG	2 cut(s)	1052, 1167
TseFI	GTSAC	1 cut(s)	1133
TseI	GCWGC	5 cut(s)	1112, 1315, 1421, 1436, 1445
Tsp45I	GTSAC	1 cut(s)	1133
TspDTI	ATGAA	3 cut(s)	83, 1385, 1480
TspGWI	ACGGA	1 cut(s)	1121
TspRI	CASTG	2 cut(s)	1052, 1167
VpaK11BI	GGWCC	2 cut(s)	716, 1351
XapI	RAATTY	5 cut(s)	383, 524, 786, 1032, 1075
XceI	RCATGY	2 cut(s)	998, 1202
XhoI	CTCGAG	1 cut(s)	1179
XmnI	GAANNNNTTC	2 cut(s)	70, 822
XspI	CTAG	7 cut(s)	414, 606, 827, 846, 1008, 1026, 1401

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.