Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0014318

Physical Location & Seq

Genomic Coordinates Reverse (-)

30391547 .. 30394739

Gene Structure 3193 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0213300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2328 bp

ATGGCACAAAACAAAACCATCCCGGTGAACGTTGGGGTTGTTCTAGACCTTAATACACAGGATGGAAAAATTTGGTTGAGTTGCATCCAAATGGCCATCTCGGACTTCTATGCTTCCCATGCTTACTACAACACTAGGCTAGTTTTGAACATCAGGGACTCCAAACAAAATGTTGTGCATGCAGCAAATGCAGCTCTAGATTTGATAAAGAATGCACAAGTGCAAGCCATCCTAGGGCCAGTGACATCGATGCAAGCAAGCTTTATTATTAGTCTCGCAGACCAAGCTCATGTACCCATTATATCATTTTCAGCAACAAGCCCTTCTCTTGCATCGCTCAGGAGCTCCTACTTTTTCAGAATTACACAAAATGACTCATCCCAAGTTAAAGCAATAAGTTCCCTAATTCACACATTTGGATGGAGACAAGTTGTGCCCATCTACGCAGATGGTGAGTTTGGCGAAGGAATCATACCATATTTAACTGAAGCTTTGCAAGAAGTTAATGCTCATATCCCCTACAAGAGTGTAATACCCCAGTCAGCCACAGATGGTCAAATTATTGAAGAGCTTTACAAGTTGATGACGATGCAAACTAGAGTCTTCATTATCCACATGACGGCAGATCAAGGCTCTAGGCTCTTTGCAAGGGCAACAGATATTGGAATGATGAGCCAAGGATATGTTTGGATCACAACTACTGAGATGACCAATAGATTAATGGCGATGAACTCCTCAGTAATAAGCTCCATGCATGGTGTATTAGGTGTAGAAACATATGTTTCGAAAACAAAGGAGCTTCAAGAATTAAAAATGCGGTGGAAACAACAGTTCCAACTGAAGAATCCGACTATTCTTGACGCTGAATTGGATGTTTATGGACTTTTGGCTTATGATGCTGCTTTTGCATTAGCAATGGCAATTGAAAAGGTTGGCACCACAAGCTTTGGCTTCCAAAAGCGCTTAGATGCTTCCTTCAGTCCATCAACAGATCTTGAAAGTTTTGAGGTCTCTATATATGGTCCAGAACTTTCTCATGCATTGTCTATTACTCATTTCAATGGCATAGCTGGGGAAATCAGTTTTGTTAATGGCCAGCTTCAATCATCAACTTTCCAGATAGTTAATATGAATGATGATGGCGCAAGGGCGATTGGATTTTGGACTCCCCAAAATGGATTGGTGAACAAATTGAATTCAGAAAACACAACCAGTTTGAAGTCCATATTTGGACCAATAATATGGCCGGGAGATTCATTCTCTATTCCAAAGGGATGGGAGATCCCAACCAACATTGATAAGAAGTTGAGAATAGGCATTCCTGTAAAGGAAGGTTATACTGAGTTTGTGAAGATCACGAAGGATCCTAGCACTAACGTAATGGATGTAACTGGGTTCTGTATTGACGTTTTTGAGGCTGCATTGGAGCTATTACCATATTCTCTTTCTTATGAGTTCGTTCCCTTCGCAAACGTTGATGGAACCAGCGCCGGAAACTACGATGACTTGTGCTATCAAGTATATCTTGGGAATTTTGACGCTGTGGTCGGAGATACAACAATCAGAGCAAACAGATCATTGTATGTAGACTTTACCATGCCCTACACAGAATCTGGTGTAATGATGGCTGTTCCAGTCAAAGACATAAAGAATGAAAATGCATGGGTTTTCTTAAAGCCTTTGACATGGGATCTTTGGCTGACGATTTCTTGTTTCTTTGTCCTTATTGCATTCGTAGTTTGGGTACTCGAACATCGAATCAATAAGGACTTTCGGGGCTCTCCTTCTCATCAAGTTAGCACCAGCGTGTGGTTCTCTTTCTCAACTATGGTCTTTTCACATAGAGAGAAAGTGGTTAGCAACTTGACTAGATTCGTGATGATTATATGGATATTCGTTTTGCTAATACTTACACAAAGTTACACAGCTAGTTTAGCTTCACTCATAACGGTCGAACGTCTTCAACCAACTGTTACCAGCATAAATGATCTTTTGAGAAAGGGGGATAGTGTGGGGTATATAAATACTTCTTATATGTACGGTCTCTTGAAACAAGCAGGTTTCCCTGATTCGAAGCTCATGAGTTTTACAACTATGGACATCATGGATGGGGATAGAATTGATGGGGCTCTTTCAAAAGGGACTGCAAAGGGTGGTATTGCTGCTGTTATTCACGAGGCTCCCTATGTGAAGCTTTTTGTTGCAAATTATTGTTCGAAGTATACCATGATTGGACCCGTCTTTAAAGCTGATGGATTTGGCTTTGTAAGATCTCTCTCCTTATTTGCCAGAAGAAGATATTGGAGTTCTCATATCTTAATTTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0010015 GO:0010087 GO:0010089 GO:0010101 GO:0010102 GO:0010311 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0022622 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048364 GO:0048518 GO:0048522 GO:0048527 GO:0048528 GO:0048646 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:1902680 GO:1903506 GO:1903508 GO:1905392 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LOB

Protein Analysis

775

Amino Acids

86.33

Weight (kDa)

6.0

Isoelectric Point (pI)

35.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peripla_BP_6	PF13458	8 - 314	2.2e-22	Periplasmic binding protein
ANF_receptor	PF01094	26 - 379	3.5e-85	Receptor family ligand binding region
Lig_chan-Glu_bd	PF10613	453 - 543	3.7e-07	Ligated ion channel L-glutamate- and glycine-binding site
Lig_chan	PF00060	562 - 668	4.2e-34	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0014318)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45420 AT4G00220
fragaria_vesca	FvH4_7g11990
malus_domestica	MD02G1202500.v1.1
prunus_persica	Prupe.2G146600_v2.0.a1
pyrus_communis	pycom02g16570
rosa_chinensis	RchiOBHm_Chr1g0350711
rosa_laevigata	RLG00000028461
rosa_multiflora	Rmu_sc0002150.1_g000005 Rmu_sc0002150.1_g000006
rosa_roxburghii	Rroxscaffold_4G00304580
rosa_rugosa	Rorug01G0213300
rosa_samantha	Rh1AG227600 Rh1BG197100 Rh1CG212500 Rh1DG225000
rosa_wichuraiana	Rw1G019710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1544
Acc36I	ACCTGC	1 cut(s)	2048
AccB1I	GGYRCC	1 cut(s)	935
AccB7I	CCANNNNNTGG	1 cut(s)	1809
AccI	GTMKAC	2 cut(s)	1587, 2222
AciI	CCGC	1 cut(s)	817
AclI	AACGTT	2 cut(s)	30, 1473
AclWI	GGATC	5 cut(s)	698, 1276, 1358, 1371, 1698
AcoI	YGGCCR	3 cut(s)	93, 1093, 1244
AcsI	RAATTY	3 cut(s)	69, 1195, 1531
AcuI	CTGAAG	3 cut(s)	507, 860, 961
AfaI	GTAC	3 cut(s)	294, 1746, 2039
AfeI	AGCGCT	1 cut(s)	962
AfiI	CCNNNNNNNGG	4 cut(s)	234, 619, 1175, 1809
AjuI	GAANNNNNNNTTGG	2 cut(s)	2284, 2316
AleI	CACNNNNGTG	1 cut(s)	1805
Alw21I	GWGCWC	1 cut(s)	347
Alw26I	GTCTC	4 cut(s)	278, 418, 1015, 2048
AlwI	GGATC	5 cut(s)	698, 1276, 1358, 1371, 1698
AlwNI	CAGNNNCTG	1 cut(s)	1613
Aor51HI	AGCGCT	1 cut(s)	962
AoxI	GGCC	4 cut(s)	93, 236, 1093, 1244
ApeKI	GCWGC	5 cut(s)	182, 191, 899, 1418, 2162
ApoI	RAATTY	3 cut(s)	69, 1195, 1531
AseI	ATTAAT	1 cut(s)	719
Asp700I	GAANNNNTTC	1 cut(s)	1959
AspA2I	CCTAGG	1 cut(s)	232
AspLEI	GCGC	3 cut(s)	963, 1145, 1490
AspS9I	GGNCC	4 cut(s)	236, 1022, 1232, 2234
AsuC2I	CCSGG	2 cut(s)	23, 1248
AsuHPI	GGTGA	3 cut(s)	37, 464, 1195
AsuII	TTCGAA	3 cut(s)	785, 2072, 2216
AvaII	GGWCC	3 cut(s)	1022, 1232, 2234
AvrII	CCTAGG	1 cut(s)	232
BaeGI	GKGCMC	1 cut(s)	438
BalI	TGGCCA	2 cut(s)	95, 1095
BamHI	GGATCC	1 cut(s)	1363
BanI	GGYRCC	1 cut(s)	935
BanII	GRGCYC	3 cut(s)	347, 1781, 2131
BarI	GAAGNNNNNNTAC	2 cut(s)	456, 488
BauI	CACGAG	1 cut(s)	2174
BbsI	GAAGAC	2 cut(s)	595, 1952
Bbv12I	GWGCWC	1 cut(s)	347
BbvI	GCAGC	5 cut(s)	194, 203, 886, 1405, 2149
BceAI	ACGGC	1 cut(s)	636
BcnI	CCSGG	2 cut(s)	23, 1248
BcoDI	GTCTC	4 cut(s)	278, 418, 1015, 2048
BfoI	RGCGCY	2 cut(s)	964, 1491
BfuAI	ACCTGC	1 cut(s)	2048
BglII	AGATCT	2 cut(s)	991, 2270
BisI	GCNGC	5 cut(s)	183, 192, 900, 1419, 2163
BlnI	CCTAGG	1 cut(s)	232
BlsI	GCNGC	5 cut(s)	184, 193, 901, 1420, 2164
Bme1390I	CCNGG	2 cut(s)	23, 1248
Bme18I	GGWCC	3 cut(s)	1022, 1232, 2234
BmgT120I	GGNCC	4 cut(s)	236, 1022, 1232, 2234
BmiI	GGNNCC	5 cut(s)	937, 1365, 1483, 2181, 2236
BmrFI	CCNGG	2 cut(s)	23, 1248
BmrI	ACTGGG	2 cut(s)	532, 1401
BmsI	GCATC	6 cut(s)	93, 240, 341, 579, 886, 958
BmuI	ACTGGG	2 cut(s)	532, 1401
BpiI	GAAGAC	2 cut(s)	595, 1952
Bpu10I	CCTNAGC	1 cut(s)	338
Bpu14I	TTCGAA	3 cut(s)	785, 2072, 2216
BpuMI	CCSGG	2 cut(s)	23, 1248
Bsa29I	ATCGAT	1 cut(s)	248
BsaI	GGTCTC	2 cut(s)	1015, 2048
BsaJI	CCNNGG	2 cut(s)	232, 676
Bsc4I	CCNNNNNNNGG	4 cut(s)	234, 619, 1175, 1809
Bse1I	ACTGG	5 cut(s)	239, 538, 1212, 1396, 1634
Bse3DI	GCAATG	1 cut(s)	921
BseCI	ATCGAT	1 cut(s)	248
BseDI	CCNNGG	2 cut(s)	232, 676
BseLI	CCNNNNNNNGG	4 cut(s)	234, 619, 1175, 1809
BseMI	GCAATG	1 cut(s)	921
BseMII	CTCAG	4 cut(s)	352, 693, 750, 1332
BseNI	ACTGG	5 cut(s)	239, 538, 1212, 1396, 1634
BseRI	GAGGAG	1 cut(s)	724
BseSI	GKGCMC	1 cut(s)	438
BseXI	GCAGC	5 cut(s)	194, 203, 886, 1405, 2149
BseYI	CCCAGC	1 cut(s)	1070
Bsh1285I	CGRYCG	1 cut(s)	1953
BshFI	GGCC	4 cut(s)	95, 238, 1095, 1246
BshNI	GGYRCC	1 cut(s)	935
BshVI	ATCGAT	1 cut(s)	248
BsiEI	CGRYCG	1 cut(s)	1953
BsiHKAI	GWGCWC	1 cut(s)	347
BsiSI	CCGG	3 cut(s)	23, 1247, 1491
BslFI	GGGAC	2 cut(s)	170, 2155
BslI	CCNNNNNNNGG	4 cut(s)	234, 619, 1175, 1809
BsmAI	GTCTC	4 cut(s)	278, 418, 1015, 2048
BsmFI	GGGAC	2 cut(s)	170, 2155
BsmI	GAATGC	3 cut(s)	217, 1317, 1730
BsnI	GGCC	4 cut(s)	95, 238, 1095, 1246
Bso31I	GGTCTC	2 cut(s)	1015, 2048
Bsp119I	TTCGAA	3 cut(s)	785, 2072, 2216
Bsp1286I	GDGCHC	4 cut(s)	347, 438, 1781, 2131
BspACI	CCGC	1 cut(s)	817
BspANI	GGCC	4 cut(s)	95, 238, 1095, 1246
BspCNI	CTCAG	4 cut(s)	351, 694, 749, 1333
BspDI	ATCGAT	1 cut(s)	248
BspHI	TCATGA	1 cut(s)	2079
BspLI	GGNNCC	5 cut(s)	937, 1365, 1483, 2181, 2236
BspMI	ACCTGC	1 cut(s)	2048
BspPI	GGATC	5 cut(s)	698, 1276, 1358, 1371, 1698
BspQI	GCTCTTC	1 cut(s)	561
BspT104I	TTCGAA	3 cut(s)	785, 2072, 2216
BspT107I	GGYRCC	1 cut(s)	935
BspTNI	GGTCTC	2 cut(s)	1015, 2048
BsrDI	GCAATG	1 cut(s)	921
BsrI	ACTGG	5 cut(s)	239, 538, 1212, 1396, 1634
BssECI	CCNNGG	2 cut(s)	232, 676
BssNAI	GTATAC	1 cut(s)	2223
BssSI	CACGAG	1 cut(s)	2174
BssT1I	CCWWGG	2 cut(s)	232, 676
Bst1107I	GTATAC	1 cut(s)	2223
Bst2BI	CACGAG	1 cut(s)	2174
Bst4CI	ACNGT	4 cut(s)	831, 1951, 1972, 2042
Bst6I	CTCTTC	1 cut(s)	561
BstAPI	GCANNNNNTGC	1 cut(s)	188
BstBI	TTCGAA	3 cut(s)	785, 2072, 2216
BstC8I	GCNNGC	5 cut(s)	180, 225, 255, 259, 1097
BstDEI	CTNAG	5 cut(s)	338, 702, 736, 964, 1341
BstH2I	RGCGCY	2 cut(s)	964, 1491
BstHHI	GCGC	3 cut(s)	963, 1145, 1490
BstMAI	GTCTC	4 cut(s)	278, 418, 1015, 2048
BstMCI	CGRYCG	1 cut(s)	1953
BstMWI	GCNNNNNNNGC	8 cut(s)	119, 188, 191, 284, 896, 905, 942, 1934
BstNSI	RCATGY	1 cut(s)	182
BstSCI	CCNGG	2 cut(s)	21, 1246
BstSLI	GKGCMC	1 cut(s)	438
BstV1I	GCAGC	5 cut(s)	194, 203, 886, 1405, 2149
BstV2I	GAAGAC	2 cut(s)	595, 1952
BstX2I	RGATCY	5 cut(s)	991, 1281, 1363, 1690, 2270
BstXI	CCANNNNNNTGG	2 cut(s)	1242, 1275
BstYI	RGATCY	5 cut(s)	991, 1281, 1363, 1690, 2270
BstZ17I	GTATAC	1 cut(s)	2223
Bsu15I	ATCGAT	1 cut(s)	248
BsuRI	GGCC	4 cut(s)	95, 238, 1095, 1246
BsuTUI	ATCGAT	1 cut(s)	248
BtgZI	GCGATG	2 cut(s)	318, 740
BtsIMutI	CAGTG	1 cut(s)	246
BveI	ACCTGC	1 cut(s)	2048
Cac8I	GCNNGC	5 cut(s)	180, 225, 255, 259, 1097
CaiI	CAGNNNCTG	1 cut(s)	1613
CciI	TCATGA	1 cut(s)	2079
CfoI	GCGC	3 cut(s)	963, 1145, 1490
Cfr13I	GGNCC	4 cut(s)	236, 1022, 1232, 2234
ClaI	ATCGAT	1 cut(s)	248
CseI	GACGC	2 cut(s)	869, 1547
Csp6I	GTAC	3 cut(s)	293, 1745, 2038
CspCI	CAANNNNNGTGG	2 cut(s)	928, 963
CviQI	GTAC	3 cut(s)	293, 1745, 2038
DdeI	CTNAG	5 cut(s)	338, 702, 736, 964, 1341
DraI	TTTAAA	1 cut(s)	2245
DrdI	GACNNNNNNGTC	1 cut(s)	1544
DseDI	GACNNNNNNGTC	1 cut(s)	1544
EaeI	YGGCCR	3 cut(s)	93, 1093, 1244
Eam1104I	CTCTTC	1 cut(s)	561
EarI	CTCTTC	1 cut(s)	561
Ecl136II	GAGCTC	1 cut(s)	345
Eco130I	CCWWGG	2 cut(s)	232, 676
Eco24I	GRGCYC	3 cut(s)	347, 1781, 2131
Eco31I	GGTCTC	2 cut(s)	1015, 2048
Eco47I	GGWCC	3 cut(s)	1022, 1232, 2234
Eco47III	AGCGCT	1 cut(s)	962
Eco53kI	GAGCTC	1 cut(s)	345
Eco57I	CTGAAG	3 cut(s)	507, 860, 961
EcoICRI	GAGCTC	1 cut(s)	345
EcoRI	GAATTC	1 cut(s)	1195
EcoT14I	CCWWGG	2 cut(s)	232, 676
EcoT22I	ATGCAT	3 cut(s)	756, 1042, 1663
EcoT38I	GRGCYC	3 cut(s)	347, 1781, 2131
ErhI	CCWWGG	2 cut(s)	232, 676
FalI	AAGNNNNNCTT	2 cut(s)	1509, 1541
FaqI	GGGAC	2 cut(s)	170, 2155
FauNDI	CATATG	1 cut(s)	778
FblI	GTMKAC	2 cut(s)	1587, 2222
Fnu4HI	GCNGC	5 cut(s)	183, 192, 900, 1419, 2163
FriOI	GRGCYC	3 cut(s)	347, 1781, 2131
Fsp4HI	GCNGC	5 cut(s)	183, 192, 900, 1419, 2163
GlaI	GCGC	3 cut(s)	962, 1144, 1489
GluI	GCNGC	5 cut(s)	183, 192, 900, 1419, 2163
GsaI	CCCAGC	1 cut(s)	1074
HaeII	RGCGCY	2 cut(s)	964, 1491
HaeIII	GGCC	4 cut(s)	95, 238, 1095, 1246
HapII	CCGG	3 cut(s)	23, 1247, 1491
HgaI	GACGC	2 cut(s)	869, 1547
HhaI	GCGC	3 cut(s)	963, 1145, 1490
Hin6I	GCGC	3 cut(s)	961, 1143, 1488
HinP1I	GCGC	3 cut(s)	961, 1143, 1488
HindIII	AAGCTT	4 cut(s)	259, 489, 943, 2192
HpaII	CCGG	3 cut(s)	23, 1247, 1491
HphI	GGTGA	3 cut(s)	37, 464, 1195
Hpy166II	GTNNAC	4 cut(s)	28, 1186, 1588, 2223
Hpy188I	TCNGA	6 cut(s)	103, 359, 849, 1201, 1550, 1565
Hpy8I	GTNNAC	4 cut(s)	28, 1186, 1588, 2223
HpyAV	CCTTC	7 cut(s)	333, 458, 985, 1325, 1354, 1474, 1794
HpyCH4III	ACNGT	4 cut(s)	831, 1951, 1972, 2042
HpyCH4IV	ACGT	5 cut(s)	30, 1377, 1407, 1473, 1957
HpyF10VI	GCNNNNNNNGC	8 cut(s)	119, 188, 191, 284, 896, 905, 942, 1934
HpyF3I	CTNAG	5 cut(s)	338, 702, 736, 964, 1341
HpySE526I	ACGT	5 cut(s)	30, 1377, 1407, 1473, 1957
HspAI	GCGC	3 cut(s)	961, 1143, 1488
LguI	GCTCTTC	1 cut(s)	561
LmnI	GCTCC	6 cut(s)	342, 350, 752, 796, 1426, 2185
Lsp1109I	GCAGC	5 cut(s)	194, 203, 886, 1405, 2149
LweI	GCATC	6 cut(s)	93, 240, 341, 579, 886, 958
MaeII	ACGT	5 cut(s)	30, 1377, 1407, 1473, 1957
MaeIII	GTNAC	4 cut(s)	241, 1387, 1919, 1972
MboII	GAAGA	7 cut(s)	578, 595, 853, 1363, 1952, 2304, 2307
MfeI	CAATTG	1 cut(s)	921
MflI	RGATCY	5 cut(s)	991, 1281, 1363, 1690, 2270
MhlI	GDGCHC	4 cut(s)	347, 438, 1781, 2131
MlsI	TGGCCA	2 cut(s)	95, 1095
MluNI	TGGCCA	2 cut(s)	95, 1095
MlyI	GAGTC	4 cut(s)	152, 368, 609, 1159
MmeI	TCCRAC	3 cut(s)	859, 872, 1528
MnlI	CCTC	4 cut(s)	745, 1000, 1408, 2170
Mox20I	TGGCCA	2 cut(s)	95, 1095
Mph1103I	ATGCAT	3 cut(s)	756, 1042, 1663
MroXI	GAANNNNTTC	1 cut(s)	1959
MscI	TGGCCA	2 cut(s)	95, 1095
MslI	CAYNNNNRTG	5 cut(s)	23, 89, 418, 1059, 1805
Msp20I	TGGCCA	2 cut(s)	95, 1095
MspI	CCGG	3 cut(s)	23, 1247, 1491
MspR9I	CCNGG	2 cut(s)	23, 1248
MunI	CAATTG	1 cut(s)	921
Mva1269I	GAATGC	3 cut(s)	217, 1317, 1730
MwoI	GCNNNNNNNGC	8 cut(s)	119, 188, 191, 284, 896, 905, 942, 1934
NciI	CCSGG	2 cut(s)	23, 1248
NdeI	CATATG	1 cut(s)	778
NlaIV	GGNNCC	5 cut(s)	937, 1365, 1483, 2181, 2236
NmuCI	GTSAC	1 cut(s)	241
NsiI	ATGCAT	3 cut(s)	756, 1042, 1663
NspI	RCATGY	1 cut(s)	182
NspV	TTCGAA	3 cut(s)	785, 2072, 2216
OliI	CACNNNNGTG	1 cut(s)	1805
PaeI	GCATGC	1 cut(s)	182
PagI	TCATGA	1 cut(s)	2079
PciSI	GCTCTTC	1 cut(s)	561
PctI	GAATGC	3 cut(s)	217, 1317, 1730
PdmI	GAANNNNTTC	1 cut(s)	1959
PfeI	GAWTC	7 cut(s)	468, 844, 1253, 1610, 1758, 1872, 2069
PflMI	CCANNNNNTGG	1 cut(s)	1809
PkrI	GCNGC	5 cut(s)	184, 193, 901, 1420, 2164
PleI	GAGTC	4 cut(s)	152, 368, 608, 1159
PpsI	GAGTC	4 cut(s)	152, 368, 608, 1159
PshBI	ATTAAT	1 cut(s)	719
Psp124BI	GAGCTC	1 cut(s)	347
Psp1406I	AACGTT	2 cut(s)	30, 1473
PspFI	CCCAGC	1 cut(s)	1070
PspN4I	GGNNCC	5 cut(s)	937, 1365, 1483, 2181, 2236
PspPI	GGNCC	4 cut(s)	236, 1022, 1232, 2234
PstNI	CAGNNNCTG	1 cut(s)	1613
PsuI	RGATCY	5 cut(s)	991, 1281, 1363, 1690, 2270
RsaI	GTAC	3 cut(s)	294, 1746, 2039
RsaNI	GTAC	3 cut(s)	293, 1745, 2038
RseI	CAYNNNNRTG	5 cut(s)	23, 89, 418, 1059, 1805
SacI	GAGCTC	1 cut(s)	347
SapI	GCTCTTC	1 cut(s)	561
SatI	GCNGC	5 cut(s)	183, 192, 900, 1419, 2163
Sau96I	GGNCC	4 cut(s)	236, 1022, 1232, 2234
SchI	GAGTC	4 cut(s)	152, 368, 609, 1159
ScrFI	CCNGG	2 cut(s)	23, 1248
SduI	GDGCHC	4 cut(s)	347, 438, 1781, 2131
SfaNI	GCATC	6 cut(s)	93, 240, 341, 579, 886, 958
SfuI	TTCGAA	3 cut(s)	785, 2072, 2216
SinI	GGWCC	3 cut(s)	1022, 1232, 2234
SmiMI	CAYNNNNRTG	5 cut(s)	23, 89, 418, 1059, 1805
SphI	GCATGC	1 cut(s)	182
SsiI	CCGC	1 cut(s)	817
SstI	GAGCTC	1 cut(s)	347
StyD4I	CCNGG	2 cut(s)	21, 1246
StyI	CCWWGG	2 cut(s)	232, 676
TaaI	ACNGT	4 cut(s)	831, 1951, 1972, 2042
TaiI	ACGT	5 cut(s)	33, 1380, 1410, 1476, 1960
TaqI	TCGA	7 cut(s)	248, 785, 1749, 1756, 1953, 2072, 2216
TfiI	GAWTC	7 cut(s)	468, 844, 1253, 1610, 1758, 1872, 2069
TscAI	CASTG	1 cut(s)	246
TseFI	GTSAC	1 cut(s)	241
TseI	GCWGC	5 cut(s)	182, 191, 899, 1418, 2162
Tsp45I	GTSAC	1 cut(s)	241
TspDTI	ATGAA	5 cut(s)	595, 743, 1145, 1245, 1668
TspRI	CASTG	1 cut(s)	246
Van91I	CCANNNNNTGG	1 cut(s)	1809
VpaK11BI	GGWCC	3 cut(s)	1022, 1232, 2234
VspI	ATTAAT	1 cut(s)	719
XapI	RAATTY	3 cut(s)	69, 1195, 1531
XbaI	TCTAGA	2 cut(s)	43, 196
XceI	RCATGY	1 cut(s)	182
XcmI	CCANNNNNNNNNTGG	1 cut(s)	718
XmaJI	CCTAGG	1 cut(s)	232
XmiI	GTMKAC	2 cut(s)	1587, 2222
XmnI	GAANNNNTTC	1 cut(s)	1959
Zsp2I	ATGCAT	3 cut(s)	756, 1042, 1663

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.