f-box protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G61060 AT3G61060 |
| fragaria_vesca | FvH4_7g13220 |
| malus_domestica | MD01G1050900.v1.1 |
| prunus_persica | Prupe.2G156400_v2.0.a1 |
| pyrus_communis | pycom01g07570 |
| rosa_chinensis | RchiOBHm_Chr1g0352361 |
| rosa_laevigata | RLG00000028336 |
| rosa_multiflora | Rmu_co8012550.1_g000001 Rmu_sc0002244.1_g000039 Rmu_ssc0000172.1_g000009 |
| rosa_roxburghii | Rroxscaffold_4G00302960 |
| rosa_rugosa | Rorug01G0227900 Rorug01G0228000 |
| rosa_samantha | Rh1BG212400 Rh1DG238800 |
| rosa_wichuraiana | Rw1G020910 Rw1G021070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 130 |
| AcyI | GRCGYC | 1 cut(s) | 162 |
| AfaI | GTAC | 2 cut(s) | 35, 168 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 158 |
| AgsI | TTSAA | 2 cut(s) | 44, 80 |
| Alw21I | GWGCWC | 1 cut(s) | 51 |
| Ama87I | CYCGRG | 1 cut(s) | 135 |
| AoxI | GGCC | 1 cut(s) | 93 |
| ApoI | RAATTY | 1 cut(s) | 130 |
| AspS9I | GGNCC | 2 cut(s) | 94, 113 |
| AvaI | CYCGRG | 1 cut(s) | 135 |
| AvaII | GGWCC | 1 cut(s) | 113 |
| Bbv12I | GWGCWC | 1 cut(s) | 51 |
| BceAI | ACGGC | 1 cut(s) | 175 |
| BclI | TGATCA | 1 cut(s) | 88 |
| BfaI | CTAG | 1 cut(s) | 189 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 27 |
| Bme18I | GGWCC | 1 cut(s) | 113 |
| BmeT110I | CYCGRG | 1 cut(s) | 135 |
| BmgT120I | GGNCC | 2 cut(s) | 94, 113 |
| BmiI | GGNNCC | 1 cut(s) | 150 |
| BsaHI | GRCGYC | 1 cut(s) | 162 |
| BsaJI | CCNNGG | 1 cut(s) | 116 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 158 |
| Bse1I | ACTGG | 1 cut(s) | 170 |
| BseDI | CCNNGG | 1 cut(s) | 116 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 158 |
| BseNI | ACTGG | 1 cut(s) | 170 |
| BshFI | GGCC | 1 cut(s) | 95 |
| BsiHKAI | GWGCWC | 1 cut(s) | 51 |
| BsiHKCI | CYCGRG | 1 cut(s) | 135 |
| BsiSI | CCGG | 1 cut(s) | 7 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 158 |
| BsnI | GGCC | 1 cut(s) | 95 |
| BsoBI | CYCGRG | 1 cut(s) | 135 |
| Bsp1286I | GDGCHC | 1 cut(s) | 51 |
| Bsp143I | GATC | 1 cut(s) | 88 |
| BspANI | GGCC | 1 cut(s) | 95 |
| BspLI | GGNNCC | 1 cut(s) | 150 |
| BsrI | ACTGG | 1 cut(s) | 170 |
| BssECI | CCNNGG | 1 cut(s) | 116 |
| BssMI | GATC | 1 cut(s) | 88 |
| BssNI | GRCGYC | 1 cut(s) | 162 |
| Bst4CI | ACNGT | 1 cut(s) | 117 |
| BstACI | GRCGYC | 1 cut(s) | 162 |
| BstC8I | GCNNGC | 1 cut(s) | 12 |
| BstDSI | CCRYGG | 1 cut(s) | 116 |
| BstKTI | GATC | 1 cut(s) | 91 |
| BstMBI | GATC | 1 cut(s) | 88 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 27 |
| BsuRI | GGCC | 1 cut(s) | 95 |
| BtgI | CCRYGG | 1 cut(s) | 116 |
| BtsIMutI | CAGTG | 1 cut(s) | 177 |
| Cac8I | GCNNGC | 1 cut(s) | 12 |
| Cfr13I | GGNCC | 2 cut(s) | 94, 113 |
| CseI | GACGC | 1 cut(s) | 151 |
| Csp6I | GTAC | 2 cut(s) | 34, 167 |
| CviJI | RGCY | 4 cut(s) | 14, 95, 123, 149 |
| CviKI_1 | RGCY | 4 cut(s) | 14, 95, 123, 149 |
| CviQI | GTAC | 2 cut(s) | 34, 167 |
| DpnI | GATC | 1 cut(s) | 90 |
| DpnII | GATC | 1 cut(s) | 88 |
| Eco47I | GGWCC | 1 cut(s) | 113 |
| Eco88I | CYCGRG | 1 cut(s) | 135 |
| EcoRI | GAATTC | 1 cut(s) | 130 |
| FaiI | YATR | 4 cut(s) | 39, 63, 65, 104 |
| FbaI | TGATCA | 1 cut(s) | 88 |
| FspBI | CTAG | 1 cut(s) | 189 |
| HaeIII | GGCC | 1 cut(s) | 95 |
| HapII | CCGG | 1 cut(s) | 7 |
| HgaI | GACGC | 1 cut(s) | 151 |
| Hin1I | GRCGYC | 1 cut(s) | 162 |
| HinfI | GANTC | 1 cut(s) | 80 |
| HpaII | CCGG | 1 cut(s) | 7 |
| Hpy166II | GTNNAC | 1 cut(s) | 175 |
| Hpy188III | TCNNGA | 1 cut(s) | 44 |
| Hpy8I | GTNNAC | 1 cut(s) | 175 |
| Hpy99I | CGWCG | 2 cut(s) | 161, 167 |
| HpyCH4III | ACNGT | 1 cut(s) | 117 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 27 |
| Hsp92I | GRCGYC | 1 cut(s) | 162 |
| Ksp22I | TGATCA | 1 cut(s) | 88 |
| Kzo9I | GATC | 1 cut(s) | 88 |
| LmnI | GCTCC | 1 cut(s) | 154 |
| LpnPI | CCDG | 4 cut(s) | 12, 20, 77, 183 |
| MaeI | CTAG | 1 cut(s) | 189 |
| MalI | GATC | 1 cut(s) | 90 |
| MboI | GATC | 1 cut(s) | 88 |
| MboII | GAAGA | 1 cut(s) | 64 |
| MhlI | GDGCHC | 1 cut(s) | 51 |
| MluCI | AATT | 1 cut(s) | 130 |
| MnlI | CCTC | 2 cut(s) | 104, 194 |
| MspI | CCGG | 1 cut(s) | 7 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 27 |
| NdeII | GATC | 1 cut(s) | 88 |
| NlaIV | GGNNCC | 1 cut(s) | 150 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 162 |
| PfeI | GAWTC | 1 cut(s) | 80 |
| PflFI | GACNNNGTC | 1 cut(s) | 161 |
| PspN4I | GGNNCC | 1 cut(s) | 150 |
| PspPI | GGNCC | 2 cut(s) | 94, 113 |
| PsyI | GACNNNGTC | 1 cut(s) | 161 |
| RsaI | GTAC | 2 cut(s) | 35, 168 |
| RsaNI | GTAC | 2 cut(s) | 34, 167 |
| Sau3AI | GATC | 1 cut(s) | 88 |
| Sau96I | GGNCC | 2 cut(s) | 94, 113 |
| SduI | GDGCHC | 1 cut(s) | 51 |
| SetI | ASST | 2 cut(s) | 186, 194 |
| SinI | GGWCC | 1 cut(s) | 113 |
| Sse9I | AATT | 1 cut(s) | 130 |
| SspMI | CTAG | 1 cut(s) | 189 |
| TaaI | ACNGT | 1 cut(s) | 117 |
| TasI | AATT | 1 cut(s) | 130 |
| TfiI | GAWTC | 1 cut(s) | 80 |
| TscAI | CASTG | 1 cut(s) | 177 |
| TspDTI | ATGAA | 2 cut(s) | 64, 119 |
| TspRI | CASTG | 1 cut(s) | 177 |
| Tth111I | GACNNNGTC | 1 cut(s) | 161 |
| VpaK11BI | GGWCC | 1 cut(s) | 113 |
| XapI | RAATTY | 1 cut(s) | 130 |
| XspI | CTAG | 1 cut(s) | 189 |