Rorug01G0310400

General transcription factor IIF subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0013034
Physical Location & Seq
Forward (+)
42683762 .. 42691642
7881 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0310400.1

Sequence Viewer

Length: 1611 bp
ATGGAGTTTCTGCTTCCATCTTCCATTTGTGATCCAACTACCATCTTAGCATTTTTACTATTTCTTTTCTCTTCCGTATGGATATCAAAATACTTGCAGAAAAACACAGCAAAGAACAAAGGACCCCCAGAAGTGGCTGGTGCATGGCCAATACTTGGCCACCTTCCCCTCTTAAGAGGGCCTCAACCGCCCCACATAATCCTAGCGAACATGGCTGACAAGTACGGACCGCTCTTCACTATCAAGCTTGGTGTGCACCGAGCTCTTATTGTAAGCAGTTGGGATGTGGCTAAAGAGTGTTTCACCACTAATGATAAAGCTTTTGTCAACCGCCCGAAAGCTTTAAGCCCGGAGATTTTGGGGTACGACTATGCCATGTTCGGTTTTAGCCCTTACGGACCTTACTGGCGCCAGGTGCGAAAGATAACCACGCTGCACATCCTCTCCAACCACAAGTTGGAGTTGCTCAAGCACGTCCGAGAATCGGAGGTGAAGGTCTCTACGAAACATATATTTGATATGTGGGAGCGAAACAAAGGTGTCTCAAATAAGGTGCTGGTGGACTTGAAGAGGTGGTTTGCAGACTTAACTTTAAATGTCATGTTCAGGATGGTTATTGGAAAGCGACTTCTTGGGGCTACCACGGCGCAAGAGAAGGAAGAGAACGAAAGCTTTCAAAAGGGGTTGAGGGAGTTTTTTATATTTGGTGGTCAATTTGTAATCTCAGATGCAGTTCCATATCTTAGGTGGTTGGATTTGGGAGGTTATGAGAAGGCCATGAAGAAGACGGCTAAAGAACTCGATGGTGCGGCTCAAAAATGGTTAGAAGAGCATAAGCACAAGAGAAGTACTAATTCTGTGCAACATAATTGTGAGCCTGACTTCATGGATATGATGCTTTCTGTCCATGATGATGATAGCACAGAAGAGTTTGCTGGTTCAATTACTGCTGATACAATTAACAAAGCTACATGCCTGGCGGTTCTTCTAGCAGGGACAGACACCTCCTCAGTGACATTAACCTGGGCTCTTTGTTTATTACTCAACAATCCTGAAGTCCTGAAGAAGGCTCAACTTGAGTTGGACAGCCATGTTGGTAGGGAAAGGCAAGTGAATGAATCAGATGTGAAGAACCTAGTCTATCTCCAAGCCATTATCAAGGAAACATTGCGGCTATACCCTGCTGCACCTCTCTTATTACCACATGAATCCAGAGAAGACTGCACAATAGGTAACTATCACGTAAGCTCAGGCACGCGTCTTCTTATCAACCTTTCAAAGCTTCAGCGCGATCCAAATGTCTGGCTCGATCCTTGTCTATTCCATCCAGAAAGGTTTCTTACAACTCACAAGAATGTTGATGTTAGGGGCCAGAGTTTTGAATTTATACCATTTGGAAGTGGTAGACGAATATGTCCAGGAATCTCTCTCGCACTTCACGTTACTCAACTTGCACTGGCTCATTTGATACATGGGTTTGAAATTGCAACTCCATCTGATGAACCAGTTGATATGGGTGAGAGTTCAGGACTAACAAACATGAAGACCACCCCACTGGAGGTCCTTCTCAACCCACGCCTACATCCTAAACTTTATGAAAATGTTGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000375 GO:0000377 GO:0000398 GO:0000428 GO:0000988 GO:0000990 GO:0000991 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005674 GO:0005856 GO:0006139 GO:0006351 GO:0006352 GO:0006354 GO:0006355 GO:0006357 GO:0006366 GO:0006367 GO:0006368 GO:0006370 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007169 GO:0008150 GO:0008152 GO:0008380 GO:0008543 GO:0009058 GO:0009059 GO:0009301 GO:0009452 GO:0009719 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0015630 GO:0016070 GO:0016071 GO:0016073 GO:0016591 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0023052 GO:0030880 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031334 GO:0031974 GO:0031981 GO:0032774 GO:0032784 GO:0032786 GO:0032968 GO:0032991 GO:0032993 GO:0034243 GO:0034641 GO:0034645 GO:0034654 GO:0034660 GO:0036260 GO:0042221 GO:0042795 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043254 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044344 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044798 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051716 GO:0055029 GO:0060255 GO:0060260 GO:0060261 GO:0061695 GO:0065007 GO:0070013 GO:0070848 GO:0070887 GO:0071310 GO:0071363 GO:0071495 GO:0071704 GO:0071774 GO:0080090 GO:0090304 GO:0090575 GO:0097550 GO:0097659 GO:0098781 GO:0140110 GO:1901360 GO:1901362 GO:1901576 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1990234 GO:2000112 GO:2000142 GO:2000144 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03022 map03022
Pfam Domains
Protein Families
TFIIF_beta

Protein Analysis

536

Amino Acids

60.57

Weight (kDa)

7.05

Isoelectric Point (pI)

41.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 45 - 512 5e-93 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013034)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G52270
fragaria_vesca FvH4_7g19881
malus_domestica MD01G1111000.v1.1 MD07G1177200.v1.1
prunus_persica Prupe.2G215900_v2.0.a1
pyrus_communis pycom07g17120
rosa_chinensis RchiOBHm_Chr1g0363871
rosa_laevigata RLG00000027539
rosa_multiflora Rmu_sc0002483.1_g000003
rosa_roxburghii Rroxscaffold_4G00292900
rosa_rugosa Rorug01G0310400 Rorug01G0310500 Rorug01G0310600
rosa_samantha Rh1AG318500 Rh1BG281700 Rh1CG298100 Rh1DG313000
rosa_wichuraiana Rw1G028270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1413
AccB1I GGYRCC 1 cut(s) 408
AccB7I CCANNNNNTGG 2 cut(s) 155, 457
AccBSI CCGCTC 1 cut(s) 232
AccI GTMKAC 1 cut(s) 1405
AccII CGCG 2 cut(s) 1258, 1290
AciI CCGC 6 cut(s) 188, 230, 331, 809, 980, 1171
AclWI GGATC 3 cut(s) 26, 1286, 1304
AcoI YGGCCR 2 cut(s) 146, 157
AcsI RAATTY 1 cut(s) 1382
AcuI CTGAAG 3 cut(s) 1074, 1082, 1268
AcyI GRCGYC 1 cut(s) 409
AfaI GTAC 3 cut(s) 224, 365, 850
AfiI CCNNNNNNNGG 6 cut(s) 133, 155, 457, 484, 1066, 1558
AflII CTTAAG 1 cut(s) 172
AflIII ACRYGT 1 cut(s) 1256
AgsI TTSAA 6 cut(s) 568, 677, 942, 1278, 1382, 1481
AjiI CACGTC 1 cut(s) 475
AjnI CCWGG 4 cut(s) 411, 975, 1022, 1417
AluBI AGCT 8 cut(s) 247, 263, 320, 341, 672, 968, 1248, 1282
AluI AGCT 8 cut(s) 247, 263, 320, 341, 672, 968, 1248, 1282
Alw21I GWGCWC 2 cut(s) 258, 265
Alw26I GTCTC 2 cut(s) 502, 547
Alw44I GTGCAC 1 cut(s) 254
AlwI GGATC 3 cut(s) 26, 1286, 1304
AoxI GGCC 5 cut(s) 146, 157, 179, 774, 1369
ApaLI GTGCAC 1 cut(s) 254
ApeKI GCWGC 2 cut(s) 433, 1184
ApoI RAATTY 1 cut(s) 1382
Asp700I GAANNNNTTC 2 cut(s) 672, 1335
AspLEI GCGC 3 cut(s) 411, 649, 1290
AspS9I GGNCC 6 cut(s) 122, 179, 227, 398, 1369, 1561
AsuC2I CCSGG 1 cut(s) 350
AsuHPI GGTGA 3 cut(s) 295, 502, 1529
AvaII GGWCC 4 cut(s) 122, 227, 398, 1561
BaeGI GKGCMC 1 cut(s) 258
BaeI ACNNNNGTAYC 2 cut(s) 1460, 1493
BalI TGGCCA 2 cut(s) 148, 159
BanI GGYRCC 1 cut(s) 408
BanII GRGCYC 2 cut(s) 265, 1030
BbsI GAAGAC 4 cut(s) 791, 1224, 1253, 1550
Bbv12I GWGCWC 2 cut(s) 258, 265
BbvI GCAGC 2 cut(s) 420, 1171
BccI CCATC 6 cut(s) 25, 50, 604, 797, 1332, 1501
BceAI ACGGC 2 cut(s) 660, 804
BciT130I CCWGG 4 cut(s) 413, 977, 1024, 1419
BcnI CCSGG 1 cut(s) 350
BcoDI GTCTC 2 cut(s) 502, 547
BfaI CTAG 4 cut(s) 203, 989, 1136, 1609
BfoI RGCGCY 1 cut(s) 412
BfrI CTTAAG 1 cut(s) 172
BisI GCNGC 4 cut(s) 434, 810, 1172, 1185
BlsI GCNGC 4 cut(s) 435, 811, 1173, 1186
BmcAI AGTACT 1 cut(s) 850
Bme1390I CCNGG 5 cut(s) 350, 413, 977, 1024, 1419
Bme18I GGWCC 4 cut(s) 122, 227, 398, 1561
BmgBI CACGTC 1 cut(s) 475
BmgT120I GGNCC 6 cut(s) 122, 179, 227, 398, 1369, 1561
BmiI GGNNCC 3 cut(s) 124, 410, 1370
BmrFI CCNGG 5 cut(s) 350, 413, 977, 1024, 1419
BmsI GCATC 2 cut(s) 718, 885
BpiI GAAGAC 4 cut(s) 791, 1224, 1253, 1550
BpmI CTGGAG 1 cut(s) 1577
Bpu10I CCTNAGC 1 cut(s) 1249
BpuEI CTTGAG 2 cut(s) 452, 1097
BpuMI CCSGG 1 cut(s) 350
BsaAI YACGTR 1 cut(s) 1243
BsaHI GRCGYC 1 cut(s) 409
BsaI GGTCTC 1 cut(s) 502
BsaJI CCNNGG 2 cut(s) 642, 1023
BsaXI ACNNNNNCTCC 2 cut(s) 428, 458
Bsc4I CCNNNNNNNGG 6 cut(s) 133, 155, 457, 484, 1066, 1558
Bse1I ACTGG 4 cut(s) 410, 1461, 1505, 1560
Bse3DI GCAATG 1 cut(s) 1166
BseBI CCWGG 4 cut(s) 413, 977, 1024, 1419
BseDI CCNNGG 2 cut(s) 642, 1023
BseGI GGATG 5 cut(s) 289, 438, 615, 1324, 1582
BseLI CCNNNNNNNGG 6 cut(s) 133, 155, 457, 484, 1066, 1558
BseMI GCAATG 1 cut(s) 1166
BseMII CTCAG 3 cut(s) 738, 1023, 1263
BseNI ACTGG 4 cut(s) 410, 1461, 1505, 1560
BseRI GAGGAG 1 cut(s) 997
BseSI GKGCMC 1 cut(s) 258
BseXI GCAGC 2 cut(s) 420, 1171
BsgI GTGCAG 3 cut(s) 419, 1170, 1207
Bsh1236I CGCG 2 cut(s) 1258, 1290
BshFI GGCC 5 cut(s) 148, 159, 181, 776, 1371
BshNI GGYRCC 1 cut(s) 408
BsiHKAI GWGCWC 2 cut(s) 258, 265
BsiSI CCGG 1 cut(s) 350
BslFI GGGAC 1 cut(s) 1009
BslI CCNNNNNNNGG 6 cut(s) 133, 155, 457, 484, 1066, 1558
BsmAI GTCTC 2 cut(s) 502, 547
BsmFI GGGAC 1 cut(s) 1009
BsnI GGCC 5 cut(s) 148, 159, 181, 776, 1371
Bso31I GGTCTC 1 cut(s) 502
Bsp1286I GDGCHC 3 cut(s) 258, 265, 1030
Bsp143I GATC 3 cut(s) 31, 1291, 1309
BspACI CCGC 6 cut(s) 188, 230, 331, 809, 980, 1171
BspANI GGCC 5 cut(s) 148, 159, 181, 776, 1371
BspCNI CTCAG 3 cut(s) 737, 1022, 1262
BspFNI CGCG 2 cut(s) 1258, 1290
BspLI GGNNCC 3 cut(s) 124, 410, 1370
BspPI GGATC 3 cut(s) 26, 1286, 1304
BspQI GCTCTTC 2 cut(s) 239, 822
BspT107I GGYRCC 1 cut(s) 408
BspTI CTTAAG 1 cut(s) 172
BspTNI GGTCTC 1 cut(s) 502
BsrBI CCGCTC 1 cut(s) 232
BsrDI GCAATG 1 cut(s) 1166
BsrI ACTGG 4 cut(s) 410, 1461, 1505, 1560
BssECI CCNNGG 2 cut(s) 642, 1023
BssMI GATC 3 cut(s) 31, 1291, 1309
BssNI GRCGYC 1 cut(s) 409
Bst2UI CCWGG 4 cut(s) 413, 977, 1024, 1419
Bst6I CTCTTC 6 cut(s) 76, 239, 563, 654, 822, 921
BstACI GRCGYC 1 cut(s) 409
BstAFI CTTAAG 1 cut(s) 172
BstBAI YACGTR 1 cut(s) 1243
BstC8I GCNNGC 1 cut(s) 1256
BstDEI CTNAG 5 cut(s) 46, 724, 743, 1009, 1249
BstDSI CCRYGG 1 cut(s) 642
BstENI CCTNNNNNAGG 1 cut(s) 1064
BstF5I GGATG 5 cut(s) 289, 438, 615, 1324, 1582
BstFNI CGCG 2 cut(s) 1258, 1290
BstH2I RGCGCY 1 cut(s) 412
BstHHI GCGC 3 cut(s) 411, 649, 1290
BstKTI GATC 3 cut(s) 34, 1294, 1312
BstMAI GTCTC 2 cut(s) 502, 547
BstMBI GATC 3 cut(s) 31, 1291, 1309
BstMWI GCNNNNNNNGC 5 cut(s) 187, 212, 253, 415, 644
BstNI CCWGG 4 cut(s) 413, 977, 1024, 1419
BstNSI RCATGY 1 cut(s) 975
BstSCI CCNGG 5 cut(s) 348, 411, 975, 1022, 1417
BstSLI GKGCMC 1 cut(s) 258
BstUI CGCG 2 cut(s) 1258, 1290
BstV1I GCAGC 2 cut(s) 420, 1171
BstV2I GAAGAC 4 cut(s) 791, 1224, 1253, 1550
BstXI CCANNNNNNTGG 2 cut(s) 1302, 1555
BsuRI GGCC 5 cut(s) 148, 159, 181, 776, 1371
BtgI CCRYGG 1 cut(s) 642
BtrI CACGTC 1 cut(s) 475
BtsCI GGATG 5 cut(s) 289, 438, 615, 1324, 1582
BtsIMutI CAGTG 3 cut(s) 1017, 1454, 1553
Cac8I GCNNGC 1 cut(s) 1256
CfoI GCGC 3 cut(s) 411, 649, 1290
Cfr13I GGNCC 6 cut(s) 122, 179, 227, 398, 1369, 1561
CpoI CGGWCCG 1 cut(s) 227
CseI GACGC 1 cut(s) 1247
Csp6I GTAC 3 cut(s) 223, 364, 849
CspI CGGWCCG 1 cut(s) 227
CviQI GTAC 3 cut(s) 223, 364, 849
DdeI CTNAG 5 cut(s) 46, 724, 743, 1009, 1249
DinI GGCGCC 1 cut(s) 410
DpnI GATC 3 cut(s) 33, 1293, 1311
DpnII GATC 3 cut(s) 31, 1291, 1309
DraI TTTAAA 1 cut(s) 594
DrdI GACNNNNNNGTC 1 cut(s) 1413
DseDI GACNNNNNNGTC 1 cut(s) 1413
EaeI YGGCCR 2 cut(s) 146, 157
Eam1104I CTCTTC 6 cut(s) 76, 239, 563, 654, 822, 921
EarI CTCTTC 6 cut(s) 76, 239, 563, 654, 822, 921
Ecl136II GAGCTC 1 cut(s) 263
Eco24I GRGCYC 2 cut(s) 265, 1030
Eco31I GGTCTC 1 cut(s) 502
Eco32I GATATC 1 cut(s) 84
Eco47I GGWCC 4 cut(s) 122, 227, 398, 1561
Eco53kI GAGCTC 1 cut(s) 263
Eco57I CTGAAG 3 cut(s) 1074, 1082, 1268
EcoICRI GAGCTC 1 cut(s) 263
EcoNI CCTNNNNNAGG 1 cut(s) 1064
EcoO109I RGGNCCY 3 cut(s) 122, 179, 1561
EcoRII CCWGG 4 cut(s) 411, 975, 1022, 1417
EcoRV GATATC 1 cut(s) 84
EcoT38I GRGCYC 2 cut(s) 265, 1030
EgeI GGCGCC 1 cut(s) 410
EheI GGCGCC 1 cut(s) 410
FaqI GGGAC 1 cut(s) 1009
FblI GTMKAC 1 cut(s) 1405
Fnu4HI GCNGC 4 cut(s) 434, 810, 1172, 1185
FokI GGATG 5 cut(s) 296, 425, 622, 1311, 1569
FriOI GRGCYC 2 cut(s) 265, 1030
Fsp4HI GCNGC 4 cut(s) 434, 810, 1172, 1185
FspBI CTAG 4 cut(s) 203, 989, 1136, 1609
GlaI GCGC 3 cut(s) 410, 648, 1289
GluI GCNGC 4 cut(s) 434, 810, 1172, 1185
GsuI CTGGAG 1 cut(s) 1577
HaeII RGCGCY 1 cut(s) 412
HaeIII GGCC 5 cut(s) 148, 159, 181, 776, 1371
HapII CCGG 1 cut(s) 350
HgaI GACGC 1 cut(s) 1247
HhaI GCGC 3 cut(s) 411, 649, 1290
Hin1I GRCGYC 1 cut(s) 409
Hin6I GCGC 3 cut(s) 409, 647, 1288
HinP1I GCGC 3 cut(s) 409, 647, 1288
HincII GTYRAC 2 cut(s) 328, 1606
HindII GTYRAC 2 cut(s) 328, 1606
HindIII AAGCTT 5 cut(s) 245, 318, 339, 670, 1280
HinfI GANTC 4 cut(s) 482, 1118, 1208, 1422
HpaII CCGG 1 cut(s) 350
HphI GGTGA 3 cut(s) 295, 502, 1529
Hpy166II GTNNAC 5 cut(s) 256, 328, 562, 1406, 1606
Hpy188I TCNGA 5 cut(s) 479, 487, 727, 1123, 1498
Hpy188III TCNNGA 6 cut(s) 607, 1052, 1060, 1212, 1328, 1527
Hpy8I GTNNAC 5 cut(s) 256, 328, 562, 1406, 1606
HpyAV CCTTC 6 cut(s) 173, 487, 649, 766, 1060, 1574
HpyCH4IV ACGT 3 cut(s) 474, 1242, 1440
HpyF10VI GCNNNNNNNGC 5 cut(s) 187, 212, 253, 415, 644
HpyF3I CTNAG 5 cut(s) 46, 724, 743, 1009, 1249
HpySE526I ACGT 3 cut(s) 474, 1242, 1440
Hsp92I GRCGYC 1 cut(s) 409
HspAI GCGC 3 cut(s) 409, 647, 1288
KasI GGCGCC 1 cut(s) 408
Kzo9I GATC 3 cut(s) 31, 1291, 1309
LguI GCTCTTC 2 cut(s) 239, 822
LmnI GCTCC 1 cut(s) 526
Lsp1109I GCAGC 2 cut(s) 420, 1171
LweI GCATC 2 cut(s) 718, 885
MaeI CTAG 4 cut(s) 203, 989, 1136, 1609
MaeII ACGT 3 cut(s) 474, 1242, 1440
MaeIII GTNAC 3 cut(s) 1012, 1232, 1441
MalI GATC 3 cut(s) 33, 1293, 1311
MbiI CCGCTC 1 cut(s) 232
MboI GATC 3 cut(s) 31, 1291, 1309
MhlI GDGCHC 3 cut(s) 258, 265, 1030
MlsI TGGCCA 2 cut(s) 148, 159
MluCI AATT 7 cut(s) 713, 853, 868, 942, 957, 1382, 1482
MluI ACGCGT 1 cut(s) 1256
MluNI TGGCCA 2 cut(s) 148, 159
Mly113I GGCGCC 1 cut(s) 409
MmeI TCCRAC 5 cut(s) 59, 438, 471, 732, 1062
Mox20I TGGCCA 2 cut(s) 148, 159
MroXI GAANNNNTTC 2 cut(s) 672, 1335
MscI TGGCCA 2 cut(s) 148, 159
MseI TTAA 6 cut(s) 173, 344, 587, 593, 960, 1019
MslI CAYNNNNRTG 4 cut(s) 870, 890, 912, 1353
Msp20I TGGCCA 2 cut(s) 148, 159
MspCI CTTAAG 1 cut(s) 172
MspI CCGG 1 cut(s) 350
MspR9I CCNGG 5 cut(s) 350, 413, 977, 1024, 1419
MvaI CCWGG 4 cut(s) 413, 977, 1024, 1419
MvnI CGCG 2 cut(s) 1258, 1290
MwoI GCNNNNNNNGC 5 cut(s) 187, 212, 253, 415, 644
NarI GGCGCC 1 cut(s) 409
NciI CCSGG 1 cut(s) 350
NdeII GATC 3 cut(s) 31, 1291, 1309
NlaIV GGNNCC 3 cut(s) 124, 410, 1370
NmuCI GTSAC 1 cut(s) 1012
NspI RCATGY 1 cut(s) 975
PciSI GCTCTTC 2 cut(s) 239, 822
PcsI WCGNNNNNNNCGW 1 cut(s) 1437
PdmI GAANNNNTTC 2 cut(s) 672, 1335
PfeI GAWTC 4 cut(s) 482, 1118, 1208, 1422
PflMI CCANNNNNTGG 2 cut(s) 155, 457
PfoI TCCNGGA 1 cut(s) 1417
PkrI GCNGC 4 cut(s) 435, 811, 1173, 1186
PluTI GGCGCC 1 cut(s) 412
Ppu21I YACGTR 1 cut(s) 1243
PpuMI RGGWCCY 2 cut(s) 122, 1561
Psp124BI GAGCTC 1 cut(s) 265
Psp5II RGGWCCY 2 cut(s) 122, 1561
Psp6I CCWGG 4 cut(s) 411, 975, 1022, 1417
PspGI CCWGG 4 cut(s) 411, 975, 1022, 1417
PspN4I GGNNCC 3 cut(s) 124, 410, 1370
PspPI GGNCC 6 cut(s) 122, 179, 227, 398, 1369, 1561
PspPPI RGGWCCY 2 cut(s) 122, 1561
RsaI GTAC 3 cut(s) 224, 365, 850
RsaNI GTAC 3 cut(s) 223, 364, 849
RseI CAYNNNNRTG 4 cut(s) 870, 890, 912, 1353
Rsr2I CGGWCCG 1 cut(s) 227
RsrII CGGWCCG 1 cut(s) 227
SacI GAGCTC 1 cut(s) 265
SapI GCTCTTC 2 cut(s) 239, 822
SaqAI TTAA 6 cut(s) 173, 344, 587, 593, 960, 1019
SatI GCNGC 4 cut(s) 434, 810, 1172, 1185
Sau3AI GATC 3 cut(s) 31, 1291, 1309
Sau96I GGNCC 6 cut(s) 122, 179, 227, 398, 1369, 1561
ScaI AGTACT 1 cut(s) 850
ScrFI CCNGG 5 cut(s) 350, 413, 977, 1024, 1419
SduI GDGCHC 3 cut(s) 258, 265, 1030
SfaNI GCATC 2 cut(s) 718, 885
SfoI GGCGCC 1 cut(s) 410
SinI GGWCC 4 cut(s) 122, 227, 398, 1561
SmiMI CAYNNNNRTG 4 cut(s) 870, 890, 912, 1353
SmlI CTYRAG 3 cut(s) 172, 467, 1076
SmoI CTYRAG 3 cut(s) 172, 467, 1076
Sse9I AATT 7 cut(s) 713, 853, 868, 942, 957, 1382, 1482
SsiI CCGC 6 cut(s) 188, 230, 331, 809, 980, 1171
SspDI GGCGCC 1 cut(s) 408
SspMI CTAG 4 cut(s) 203, 989, 1136, 1609
SstI GAGCTC 1 cut(s) 265
StyD4I CCNGG 5 cut(s) 348, 411, 975, 1022, 1417
TaiI ACGT 3 cut(s) 477, 1245, 1443
TaqI TCGA 2 cut(s) 801, 1308
TasI AATT 7 cut(s) 713, 853, 868, 942, 957, 1382, 1482
TatI WGTACW 1 cut(s) 848
TauI GCSGC 2 cut(s) 812, 1174
TfiI GAWTC 4 cut(s) 482, 1118, 1208, 1422
Tru1I TTAA 6 cut(s) 173, 344, 587, 593, 960, 1019
Tru9I TTAA 6 cut(s) 173, 344, 587, 593, 960, 1019
TscAI CASTG 3 cut(s) 1017, 1461, 1560
TseFI GTSAC 1 cut(s) 1012
TseI GCWGC 2 cut(s) 433, 1184
Tsp45I GTSAC 1 cut(s) 1012
TspDTI ATGAA 7 cut(s) 794, 874, 1131, 1221, 1515, 1556, 1611
TspGWI ACGGA 3 cut(s) 64, 240, 411
TspRI CASTG 3 cut(s) 1017, 1461, 1560
Van91I CCANNNNNTGG 2 cut(s) 155, 457
Vha464I CTTAAG 1 cut(s) 172
VneI GTGCAC 1 cut(s) 254
VpaK11BI GGWCC 4 cut(s) 122, 227, 398, 1561
XagI CCTNNNNNAGG 1 cut(s) 1064
XapI RAATTY 1 cut(s) 1382
XceI RCATGY 1 cut(s) 975
XcmI CCANNNNNNNNNTGG 2 cut(s) 454, 744
XmiI GTMKAC 1 cut(s) 1405
XmnI GAANNNNTTC 2 cut(s) 672, 1335
XspI CTAG 4 cut(s) 203, 989, 1136, 1609
ZrmI AGTACT 1 cut(s) 850
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.