General transcription factor IIF subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G52270 |
| fragaria_vesca | FvH4_7g19881 |
| malus_domestica | MD01G1111000.v1.1 MD07G1177200.v1.1 |
| prunus_persica | Prupe.2G215900_v2.0.a1 |
| pyrus_communis | pycom07g17120 |
| rosa_chinensis | RchiOBHm_Chr1g0363871 |
| rosa_laevigata | RLG00000027539 |
| rosa_multiflora | Rmu_sc0002483.1_g000003 |
| rosa_roxburghii | Rroxscaffold_4G00292900 |
| rosa_rugosa | Rorug01G0310400 Rorug01G0310500 Rorug01G0310600 |
| rosa_samantha | Rh1AG318500 Rh1BG281700 Rh1CG298100 Rh1DG313000 |
| rosa_wichuraiana | Rw1G028270 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 47 |
| AciI | CCGC | 4 cut(s) | 98, 159, 180, 278 |
| AcoI | YGGCCR | 1 cut(s) | 279 |
| AcsI | RAATTY | 2 cut(s) | 64, 404 |
| AcyI | GRCGYC | 1 cut(s) | 156 |
| AfaI | GTAC | 1 cut(s) | 576 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 539 |
| AgsI | TTSAA | 1 cut(s) | 400 |
| AhlI | ACTAGT | 1 cut(s) | 35 |
| AjnI | CCWGG | 3 cut(s) | 326, 538, 562 |
| AluBI | AGCT | 1 cut(s) | 582 |
| AluI | AGCT | 1 cut(s) | 582 |
| Alw26I | GTCTC | 1 cut(s) | 77 |
| AoxI | GGCC | 3 cut(s) | 202, 279, 530 |
| ApeKI | GCWGC | 1 cut(s) | 95 |
| ApoI | RAATTY | 2 cut(s) | 64, 404 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 395 |
| AspS9I | GGNCC | 2 cut(s) | 203, 566 |
| AsuHPI | GGTGA | 1 cut(s) | 511 |
| AvaII | GGWCC | 1 cut(s) | 566 |
| BaeGI | GKGCMC | 1 cut(s) | 523 |
| BanI | GGYRCC | 1 cut(s) | 47 |
| BbsI | GAAGAC | 1 cut(s) | 12 |
| BbvI | GCAGC | 1 cut(s) | 107 |
| BccI | CCATC | 1 cut(s) | 161 |
| BceAI | ACGGC | 1 cut(s) | 441 |
| BciT130I | CCWGG | 3 cut(s) | 328, 540, 564 |
| BcoDI | GTCTC | 1 cut(s) | 77 |
| BcuI | ACTAGT | 1 cut(s) | 35 |
| BfaI | CTAG | 1 cut(s) | 36 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 109 |
| BisI | GCNGC | 4 cut(s) | 96, 159, 180, 279 |
| BlsI | GCNGC | 4 cut(s) | 97, 160, 181, 280 |
| Bme1390I | CCNGG | 3 cut(s) | 328, 540, 564 |
| Bme18I | GGWCC | 1 cut(s) | 566 |
| BmgT120I | GGNCC | 2 cut(s) | 203, 566 |
| BmiI | GGNNCC | 6 cut(s) | 49, 102, 172, 189, 561, 568 |
| BmrFI | CCNGG | 3 cut(s) | 328, 540, 564 |
| BmrI | ACTGGG | 1 cut(s) | 564 |
| BmuI | ACTGGG | 1 cut(s) | 564 |
| BpiI | GAAGAC | 1 cut(s) | 12 |
| BpuEI | CTTGAG | 1 cut(s) | 455 |
| BsaBI | GATNNNNATC | 1 cut(s) | 429 |
| BsaHI | GRCGYC | 1 cut(s) | 156 |
| BsaJI | CCNNGG | 4 cut(s) | 213, 267, 327, 539 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 92, 122 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 539 |
| Bse118I | RCCGGY | 1 cut(s) | 161 |
| Bse1I | ACTGG | 4 cut(s) | 27, 104, 279, 570 |
| Bse8I | GATNNNNATC | 1 cut(s) | 429 |
| BseBI | CCWGG | 3 cut(s) | 328, 540, 564 |
| BseDI | CCNNGG | 4 cut(s) | 213, 267, 327, 539 |
| BseGI | GGATG | 2 cut(s) | 219, 549 |
| BseJI | GATNNNNATC | 1 cut(s) | 429 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 539 |
| BseNI | ACTGG | 4 cut(s) | 27, 104, 279, 570 |
| BseRI | GAGGAG | 1 cut(s) | 200 |
| BseSI | GKGCMC | 1 cut(s) | 523 |
| BseXI | GCAGC | 1 cut(s) | 107 |
| BshFI | GGCC | 3 cut(s) | 204, 281, 532 |
| BshNI | GGYRCC | 1 cut(s) | 47 |
| BsiSI | CCGG | 2 cut(s) | 162, 201 |
| BslFI | GGGAC | 1 cut(s) | 344 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 539 |
| BsmAI | GTCTC | 1 cut(s) | 77 |
| BsmBI | CGTCTC | 1 cut(s) | 77 |
| BsmFI | GGGAC | 1 cut(s) | 344 |
| BsnI | GGCC | 3 cut(s) | 204, 281, 532 |
| Bsp1286I | GDGCHC | 1 cut(s) | 523 |
| Bsp1407I | TGTACA | 1 cut(s) | 574 |
| Bsp143I | GATC | 1 cut(s) | 501 |
| Bsp19I | CCATGG | 1 cut(s) | 267 |
| BspACI | CCGC | 4 cut(s) | 98, 159, 180, 278 |
| BspANI | GGCC | 3 cut(s) | 204, 281, 532 |
| BspLI | GGNNCC | 6 cut(s) | 49, 102, 172, 189, 561, 568 |
| BspT107I | GGYRCC | 1 cut(s) | 47 |
| BsrFI | RCCGGY | 1 cut(s) | 161 |
| BsrGI | TGTACA | 1 cut(s) | 574 |
| BsrI | ACTGG | 4 cut(s) | 27, 104, 279, 570 |
| BssAI | RCCGGY | 1 cut(s) | 161 |
| BssECI | CCNNGG | 4 cut(s) | 213, 267, 327, 539 |
| BssMI | GATC | 1 cut(s) | 501 |
| BssNI | GRCGYC | 1 cut(s) | 156 |
| BssT1I | CCWWGG | 2 cut(s) | 213, 267 |
| Bst2UI | CCWGG | 3 cut(s) | 328, 540, 564 |
| BstACI | GRCGYC | 1 cut(s) | 156 |
| BstAUI | TGTACA | 1 cut(s) | 574 |
| BstC8I | GCNNGC | 1 cut(s) | 163 |
| BstDEI | CTNAG | 1 cut(s) | 258 |
| BstDSI | CCRYGG | 1 cut(s) | 267 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 537 |
| BstF5I | GGATG | 2 cut(s) | 219, 549 |
| BstKTI | GATC | 1 cut(s) | 504 |
| BstMAI | GTCTC | 1 cut(s) | 77 |
| BstMBI | GATC | 1 cut(s) | 501 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 109 |
| BstNI | CCWGG | 3 cut(s) | 328, 540, 564 |
| BstSCI | CCNGG | 3 cut(s) | 326, 538, 562 |
| BstSLI | GKGCMC | 1 cut(s) | 523 |
| BstV1I | GCAGC | 1 cut(s) | 107 |
| BstV2I | GAAGAC | 1 cut(s) | 12 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 274 |
| BsuRI | GGCC | 3 cut(s) | 204, 281, 532 |
| BtgI | CCRYGG | 1 cut(s) | 267 |
| BtgZI | GCGATG | 1 cut(s) | 180 |
| BtsCI | GGATG | 2 cut(s) | 219, 549 |
| BtsIMutI | CAGTG | 4 cut(s) | 34, 111, 282, 577 |
| Cac8I | GCNNGC | 1 cut(s) | 163 |
| Cfr10I | RCCGGY | 1 cut(s) | 161 |
| Cfr13I | GGNCC | 2 cut(s) | 203, 566 |
| CseI | GACGC | 1 cut(s) | 164 |
| Csp6I | GTAC | 1 cut(s) | 575 |
| CviAII | CATG | 3 cut(s) | 268, 412, 422 |
| CviQI | GTAC | 1 cut(s) | 575 |
| DdeI | CTNAG | 1 cut(s) | 258 |
| DpnI | GATC | 1 cut(s) | 503 |
| DpnII | GATC | 1 cut(s) | 501 |
| EaeI | YGGCCR | 1 cut(s) | 279 |
| Eco130I | CCWWGG | 2 cut(s) | 213, 267 |
| Eco147I | AGGCCT | 1 cut(s) | 532 |
| Eco47I | GGWCC | 1 cut(s) | 566 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 537 |
| EcoRII | CCWGG | 3 cut(s) | 326, 538, 562 |
| EcoT14I | CCWWGG | 2 cut(s) | 213, 267 |
| ErhI | CCWWGG | 2 cut(s) | 213, 267 |
| Esp3I | CGTCTC | 1 cut(s) | 77 |
| FaeI | CATG | 3 cut(s) | 271, 415, 425 |
| FaqI | GGGAC | 1 cut(s) | 344 |
| FatI | CATG | 3 cut(s) | 267, 411, 421 |
| FauNDI | CATATG | 2 cut(s) | 477, 525 |
| Fnu4HI | GCNGC | 4 cut(s) | 96, 159, 180, 279 |
| FokI | GGATG | 2 cut(s) | 206, 556 |
| Fsp4HI | GCNGC | 4 cut(s) | 96, 159, 180, 279 |
| FspBI | CTAG | 1 cut(s) | 36 |
| GluI | GCNGC | 4 cut(s) | 96, 159, 180, 279 |
| HaeIII | GGCC | 3 cut(s) | 204, 281, 532 |
| HapII | CCGG | 2 cut(s) | 162, 201 |
| HgaI | GACGC | 1 cut(s) | 164 |
| Hin1I | GRCGYC | 1 cut(s) | 156 |
| Hin1II | CATG | 3 cut(s) | 271, 415, 425 |
| HinfI | GANTC | 4 cut(s) | 287, 359, 430, 493 |
| HpaII | CCGG | 2 cut(s) | 162, 201 |
| HphI | GGTGA | 1 cut(s) | 511 |
| Hpy166II | GTNNAC | 3 cut(s) | 264, 461, 575 |
| Hpy188I | TCNGA | 1 cut(s) | 358 |
| Hpy188III | TCNNGA | 2 cut(s) | 434, 605 |
| Hpy8I | GTNNAC | 3 cut(s) | 264, 461, 575 |
| Hpy99I | CGWCG | 2 cut(s) | 137, 179 |
| HpyAV | CCTTC | 1 cut(s) | 207 |
| HpyCH4IV | ACGT | 2 cut(s) | 132, 312 |
| HpyCH4V | TGCA | 1 cut(s) | 293 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 109 |
| HpyF3I | CTNAG | 1 cut(s) | 258 |
| HpySE526I | ACGT | 2 cut(s) | 132, 312 |
| Hsp92I | GRCGYC | 1 cut(s) | 156 |
| Hsp92II | CATG | 3 cut(s) | 271, 415, 425 |
| KroI | GCCGGC | 1 cut(s) | 161 |
| KroNI | GCCGGC | 1 cut(s) | 163 |
| Kzo9I | GATC | 1 cut(s) | 501 |
| LmnI | GCTCC | 4 cut(s) | 100, 176, 187, 565 |
| Lsp1109I | GCAGC | 1 cut(s) | 107 |
| MaeI | CTAG | 1 cut(s) | 36 |
| MaeII | ACGT | 2 cut(s) | 132, 312 |
| MaeIII | GTNAC | 1 cut(s) | 308 |
| MalI | GATC | 1 cut(s) | 503 |
| MboI | GATC | 1 cut(s) | 501 |
| MboII | GAAGA | 2 cut(s) | 17, 388 |
| MhlI | GDGCHC | 1 cut(s) | 523 |
| MluCI | AATT | 4 cut(s) | 64, 404, 439, 600 |
| MlyI | GAGTC | 1 cut(s) | 368 |
| MnlI | CCTC | 7 cut(s) | 63, 135, 178, 233, 246, 379, 522 |
| MreI | CGCCGGCG | 1 cut(s) | 161 |
| MroNI | GCCGGC | 1 cut(s) | 161 |
| MroXI | GAANNNNTTC | 1 cut(s) | 395 |
| MseI | TTAA | 1 cut(s) | 147 |
| MslI | CAYNNNNRTG | 1 cut(s) | 341 |
| MspA1I | CMGCKG | 1 cut(s) | 98 |
| MspI | CCGG | 2 cut(s) | 162, 201 |
| MspR9I | CCNGG | 3 cut(s) | 328, 540, 564 |
| MvaI | CCWGG | 3 cut(s) | 328, 540, 564 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 109 |
| NaeI | GCCGGC | 1 cut(s) | 163 |
| NcoI | CCATGG | 1 cut(s) | 267 |
| NdeI | CATATG | 2 cut(s) | 477, 525 |
| NdeII | GATC | 1 cut(s) | 501 |
| NgoMIV | GCCGGC | 1 cut(s) | 161 |
| NlaIII | CATG | 3 cut(s) | 271, 415, 425 |
| NlaIV | GGNNCC | 6 cut(s) | 49, 102, 172, 189, 561, 568 |
| PceI | AGGCCT | 1 cut(s) | 532 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 162 |
| PdiI | GCCGGC | 1 cut(s) | 163 |
| PdmI | GAANNNNTTC | 1 cut(s) | 395 |
| PfeI | GAWTC | 3 cut(s) | 287, 430, 493 |
| PfoI | TCCNGGA | 1 cut(s) | 562 |
| PkrI | GCNGC | 4 cut(s) | 97, 160, 181, 280 |
| PleI | GAGTC | 1 cut(s) | 367 |
| PpsI | GAGTC | 1 cut(s) | 367 |
| Psp6I | CCWGG | 3 cut(s) | 326, 538, 562 |
| PspGI | CCWGG | 3 cut(s) | 326, 538, 562 |
| PspN4I | GGNNCC | 6 cut(s) | 49, 102, 172, 189, 561, 568 |
| PspPI | GGNCC | 2 cut(s) | 203, 566 |
| RsaI | GTAC | 1 cut(s) | 576 |
| RsaNI | GTAC | 1 cut(s) | 575 |
| RseI | CAYNNNNRTG | 1 cut(s) | 341 |
| SaqAI | TTAA | 1 cut(s) | 147 |
| SatI | GCNGC | 4 cut(s) | 96, 159, 180, 279 |
| Sau3AI | GATC | 1 cut(s) | 501 |
| Sau96I | GGNCC | 2 cut(s) | 203, 566 |
| SchI | GAGTC | 1 cut(s) | 368 |
| ScrFI | CCNGG | 3 cut(s) | 328, 540, 564 |
| SduI | GDGCHC | 1 cut(s) | 523 |
| SetI | ASST | 7 cut(s) | 135, 219, 259, 315, 501, 584, 588 |
| SgrAI | CRCCGGYG | 1 cut(s) | 161 |
| SinI | GGWCC | 1 cut(s) | 566 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 341 |
| SmlI | CTYRAG | 2 cut(s) | 434, 605 |
| SmoI | CTYRAG | 2 cut(s) | 434, 605 |
| SpeI | ACTAGT | 1 cut(s) | 35 |
| Sse9I | AATT | 4 cut(s) | 64, 404, 439, 600 |
| SseBI | AGGCCT | 1 cut(s) | 532 |
| SsiI | CCGC | 4 cut(s) | 98, 159, 180, 278 |
| SspMI | CTAG | 1 cut(s) | 36 |
| StuI | AGGCCT | 1 cut(s) | 532 |
| StyD4I | CCNGG | 3 cut(s) | 326, 538, 562 |
| StyI | CCWWGG | 2 cut(s) | 213, 267 |
| TaiI | ACGT | 2 cut(s) | 135, 315 |
| TaqI | TCGA | 1 cut(s) | 504 |
| TasI | AATT | 4 cut(s) | 64, 404, 439, 600 |
| TatI | WGTACW | 1 cut(s) | 574 |
| TauI | GCSGC | 3 cut(s) | 161, 182, 281 |
| TfiI | GAWTC | 3 cut(s) | 287, 430, 493 |
| Tru1I | TTAA | 1 cut(s) | 147 |
| Tru9I | TTAA | 1 cut(s) | 147 |
| TscAI | CASTG | 4 cut(s) | 34, 111, 289, 577 |
| TseI | GCWGC | 1 cut(s) | 95 |
| TspDTI | ATGAA | 4 cut(s) | 131, 325, 428, 494 |
| TspGWI | ACGGA | 1 cut(s) | 163 |
| TspRI | CASTG | 4 cut(s) | 34, 111, 289, 577 |
| VpaK11BI | GGWCC | 1 cut(s) | 566 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 537 |
| XapI | RAATTY | 2 cut(s) | 64, 404 |
| XmnI | GAANNNNTTC | 1 cut(s) | 395 |
| XspI | CTAG | 1 cut(s) | 36 |