Rorug01G0343600

Serine threonine-protein phosphatase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
46187594 .. 46188216
623 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0343600.1

Sequence Viewer

Length: 384 bp
ATGCTTCAAACACAAGATATCGGCGGTATGTTTCAACAACAAGTAATGTCTCCCAGCAATGACAATGGTTTATCAGAGACCCCTACGATAACAAAGAGACAAAGAGGACCAAACCAAAAAAATTGGGCATTGGAGGGACCAGAAAAATTGTTGTGGAACCGCTTTGGGCTTCCTAAGGGTCCGCGGAAAAAGGAAACTCTTGACTTGACACACCCACGAGTTGCCTGTTTGGAAAGTAAAATCAGGGAAAAGGTCAGGAGCAAGTTGAATGAGCGCTGGAAGCATTGGAAGTCTGAGTTGAGCAAGAAATGGTATAAACCATTCAAGAATAGTCCCCTTAGGTTTCGCAAACCTGATGATGATCGTGTTGATGAGGACCAATAG

Protein Analysis

127

Amino Acids

15.06

Weight (kDa)

9.95

Isoelectric Point (pI)

46.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011652)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 184
AciI CCGC 4 cut(s) 24, 160, 182, 184
AfeI AGCGCT 1 cut(s) 275
AgsI TTSAA 4 cut(s) 8, 35, 268, 325
Alw26I GTCTC 3 cut(s) 54, 71, 91
Aor51HI AGCGCT 1 cut(s) 275
AspLEI GCGC 1 cut(s) 276
AspS9I GGNCC 4 cut(s) 107, 137, 179, 376
AvaII GGWCC 4 cut(s) 107, 137, 179, 376
AxyI CCTNAGG 2 cut(s) 174, 338
BauI CACGAG 1 cut(s) 216
BcoDI GTCTC 3 cut(s) 54, 71, 91
BfoI RGCGCY 1 cut(s) 277
Bme18I GGWCC 4 cut(s) 107, 137, 179, 376
BmgT120I GGNCC 4 cut(s) 107, 137, 179, 376
BmiI GGNNCC 3 cut(s) 138, 158, 180
BsaBI GATNNNNATC 1 cut(s) 360
BsaI GGTCTC 1 cut(s) 71
BsaJI CCNNGG 1 cut(s) 182
Bse21I CCTNAGG 2 cut(s) 174, 338
Bse3DI GCAATG 1 cut(s) 64
Bse8I GATNNNNATC 1 cut(s) 360
BseDI CCNNGG 1 cut(s) 182
BseJI GATNNNNATC 1 cut(s) 360
BseMI GCAATG 1 cut(s) 64
BseMII CTCAG 1 cut(s) 285
BseYI CCCAGC 1 cut(s) 53
Bsh1236I CGCG 1 cut(s) 184
BslFI GGGAC 2 cut(s) 150, 318
BsmAI GTCTC 3 cut(s) 54, 71, 91
BsmFI GGGAC 2 cut(s) 150, 318
Bso31I GGTCTC 1 cut(s) 71
Bsp143I GATC 1 cut(s) 361
BspACI CCGC 4 cut(s) 24, 160, 182, 184
BspCNI CTCAG 1 cut(s) 286
BspFNI CGCG 1 cut(s) 184
BspLI GGNNCC 3 cut(s) 138, 158, 180
BspTNI GGTCTC 1 cut(s) 71
BsrDI GCAATG 1 cut(s) 64
BssECI CCNNGG 1 cut(s) 182
BssMI GATC 1 cut(s) 361
BssSI CACGAG 1 cut(s) 216
Bst2BI CACGAG 1 cut(s) 216
BstDEI CTNAG 3 cut(s) 174, 294, 338
BstDSI CCRYGG 1 cut(s) 182
BstFNI CGCG 1 cut(s) 184
BstH2I RGCGCY 1 cut(s) 277
BstHHI GCGC 1 cut(s) 276
BstKTI GATC 1 cut(s) 364
BstMAI GTCTC 3 cut(s) 54, 71, 91
BstMBI GATC 1 cut(s) 361
BstMWI GCNNNNNNNGC 1 cut(s) 280
BstUI CGCG 1 cut(s) 184
Bsu36I CCTNAGG 2 cut(s) 174, 338
BtgI CCRYGG 1 cut(s) 182
CfoI GCGC 1 cut(s) 276
Cfr13I GGNCC 4 cut(s) 107, 137, 179, 376
Cfr42I CCGCGG 1 cut(s) 185
CviJI RGCY 1 cut(s) 169
CviKI_1 RGCY 1 cut(s) 169
DdeI CTNAG 3 cut(s) 174, 294, 338
DpnI GATC 1 cut(s) 363
DpnII GATC 1 cut(s) 361
Eco31I GGTCTC 1 cut(s) 71
Eco32I GATATC 1 cut(s) 19
Eco47I GGWCC 4 cut(s) 107, 137, 179, 376
Eco47III AGCGCT 1 cut(s) 275
Eco81I CCTNAGG 2 cut(s) 174, 338
EcoRV GATATC 1 cut(s) 19
FaiI YATR 2 cut(s) 29, 315
FaqI GGGAC 2 cut(s) 150, 318
GlaI GCGC 1 cut(s) 275
GsaI CCCAGC 1 cut(s) 57
HaeII RGCGCY 1 cut(s) 277
HhaI GCGC 1 cut(s) 276
Hin6I GCGC 1 cut(s) 274
HinP1I GCGC 1 cut(s) 274
Hpy188I TCNGA 2 cut(s) 76, 295
Hpy188III TCNNGA 3 cut(s) 200, 256, 325
HpyF10VI GCNNNNNNNGC 1 cut(s) 280
HpyF3I CTNAG 3 cut(s) 174, 294, 338
HspAI GCGC 1 cut(s) 274
KspI CCGCGG 1 cut(s) 185
Kzo9I GATC 1 cut(s) 361
LmnI GCTCC 1 cut(s) 258
LpnPI CCDG 7 cut(s) 67, 153, 229, 238, 241, 262, 366
MalI GATC 1 cut(s) 363
MboI GATC 1 cut(s) 361
MluCI AATT 2 cut(s) 121, 146
MnlI CCTC 3 cut(s) 98, 127, 367
MspA1I CMGCKG 1 cut(s) 184
MvnI CGCG 1 cut(s) 184
MwoI GCNNNNNNNGC 1 cut(s) 280
NdeII GATC 1 cut(s) 361
NlaIV GGNNCC 3 cut(s) 138, 158, 180
PspFI CCCAGC 1 cut(s) 53
PspN4I GGNNCC 3 cut(s) 138, 158, 180
PspPI GGNCC 4 cut(s) 107, 137, 179, 376
SacII CCGCGG 1 cut(s) 185
Sau3AI GATC 1 cut(s) 361
Sau96I GGNCC 4 cut(s) 107, 137, 179, 376
SetI ASST 3 cut(s) 255, 344, 355
Sfr303I CCGCGG 1 cut(s) 185
SgrBI CCGCGG 1 cut(s) 185
SinI GGWCC 4 cut(s) 107, 137, 179, 376
Sse9I AATT 2 cut(s) 121, 146
SsiI CCGC 4 cut(s) 24, 160, 182, 184
TasI AATT 2 cut(s) 121, 146
VpaK11BI GGWCC 4 cut(s) 107, 137, 179, 376
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.