Rh1AG351000

Serine threonine-protein phosphatase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
Physical Location & Seq
Reverse (-)
58775849 .. 58777369
1521 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG351000.1

Sequence Viewer

Length: 1191 bp
ATGAGTGGTGTGATTCACACAAGCGTGAAGTGTGTCACTTTCGCTGTAGACACAGACAATAAGAATGTACAGAAGAACATGAGCTTGGCCTCAAACCCATACTGTGATGGTAGCATTCCTTGCTTGCCAATGTCGAGCTCTGCTGCCAAGGAAAAATATGAGATGTTAAAGAAGAATTCAGAATGCACTGCATCTGCTTCGGAATGGGTTGGAGGAATGTCCCCTGGCATACTGGATGATGTAATCAGACGTCTCACAGAGGTCCAATCAGCAAGGCCGGGGAAGCAGGTCCATCTCTCGCAGTCTGACATCCAGCAGCCTTGTGTAGCTTCCAAAGACATCTTCCTTCAACAGCCCAATTTGCTGGAGCTTAAAGGTCCTGTCAGTATTTGTGGCAACATCAATGGGCTATTCTCTGACCTGTTGAGGCTCTTTGAACATGGTGGTTTTCCTCCTAGTGCAAAATATCTATTCGTAGGTGGTTATGTGGATTATGGGAAGCAAAGGATAGAAACAATGTGCCTCTTGCTTGCTTATAAAATCAAACATCCGGAGAACTTCTTTCTCCTTAGAGGGAATCATGAATGTGCTTCTATCAACCTAAAACATGGATTTTATGATGAATGCAAGCGGAGATTCAATGTGAGGATCTGGAAATGCTTCAATGACTCTTTTAACTGTCTTCCTGCGGCAGCTCTTGTAGATGACAGAATATTATGTGTGCATGGTGGTCCTTCGCCCGATTTGGAGAACTTGGATCAGATCAGAAACTTGCCTCGTCCTAGTAATGTCCCTGATACCGGCTTGCTTTGTGATTTGCTCTGGTCAAGTCCTTGTAGTGATGTTAAGGGATGGGGAACGAACAAACACTCAGAACACATTGAACTCCCATTCTCTTACTTAACCTTTGGGTCTGATAAGGTGACAGAATTCTTAATGAAGCATGATTTGGACCTTCTTTGTTGTGCACAACAGGTTGTGGAGTGTGATCGCGGCTATGAATTCTTCGCCAACAGCCAACTTGTTACAATTTCATCAGCCCCCAACTTCCGCAGTGAACATAACAATGCTGGAGCTATGATGCATGTAGATGAGACCTTAATGTGCTCCTTCCAGATTCTCAAGGCAAAAGTCAAGAGATCTGTGTTCAATTTTTCACCAGTAACAAGAGCATTTCAGAGAAATCCTTAA

Protein Analysis

396

Amino Acids

44.25

Weight (kDa)

6.84

Isoelectric Point (pI)

54.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
STPPase_N PF16891 78 - 125 8.1e-16 Serine-threonine protein phosphatase N-terminal domain
Metallophos PF00149 130 - 323 1.7e-32 Calcineurin-like phosphoesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011652)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 537
AatII GACGTC 1 cut(s) 253
Acc36I ACCTGC 1 cut(s) 277
AccI GTMKAC 1 cut(s) 48
AccII CGCG 1 cut(s) 993
AccIII TCCGGA 1 cut(s) 550
AciI CCGC 4 cut(s) 631, 689, 993, 1051
AclWI GGATC 2 cut(s) 656, 765
AcsI RAATTY 3 cut(s) 175, 929, 1001
AcyI GRCGYC 1 cut(s) 250
AfaI GTAC 1 cut(s) 69
AfiI CCNNNNNNNGG 1 cut(s) 800
AgsI TTSAA 6 cut(s) 350, 437, 640, 664, 884, 1150
AjnI CCWGG 1 cut(s) 223
AjuI GAANNNNNNNTTGG 6 cut(s) 68, 100, 326, 358, 932, 964
AleI CACNNNNGTG 1 cut(s) 23
AluBI AGCT 6 cut(s) 84, 138, 329, 370, 695, 1076
AluI AGCT 6 cut(s) 84, 138, 329, 370, 695, 1076
Alw21I GWGCWC 3 cut(s) 140, 970, 1109
Alw26I GTCTC 2 cut(s) 257, 1088
Alw44I GTGCAC 1 cut(s) 966
AlwI GGATC 2 cut(s) 656, 765
Aor13HI TCCGGA 1 cut(s) 550
AoxI GGCC 2 cut(s) 87, 275
ApaLI GTGCAC 1 cut(s) 966
ApeKI GCWGC 3 cut(s) 143, 316, 692
ApoI RAATTY 3 cut(s) 175, 929, 1001
Asp700I GAANNNNTTC 1 cut(s) 659
AspS9I GGNCC 5 cut(s) 262, 289, 377, 731, 952
AsuC2I CCSGG 1 cut(s) 279
AsuHPI GGTGA 2 cut(s) 934, 1149
AvaII GGWCC 5 cut(s) 262, 289, 377, 731, 952
BaeGI GKGCMC 1 cut(s) 970
BanII GRGCYC 1 cut(s) 140
BbsI GAAGAC 1 cut(s) 674
Bbv12I GWGCWC 3 cut(s) 140, 970, 1109
BbvI GCAGC 3 cut(s) 130, 328, 704
BccI CCATC 3 cut(s) 101, 300, 846
BcgI CGANNNNNNTGC 2 cut(s) 180, 214
BciT130I CCWGG 1 cut(s) 225
BcnI CCSGG 1 cut(s) 279
BcoDI GTCTC 2 cut(s) 257, 1088
BfaI CTAG 2 cut(s) 456, 783
BfmI CTRYAG 1 cut(s) 45
BfuAI ACCTGC 1 cut(s) 277
BglII AGATCT 1 cut(s) 1139
BisI GCNGC 5 cut(s) 144, 317, 690, 693, 994
BlsI GCNGC 5 cut(s) 145, 318, 691, 694, 995
Bme1390I CCNGG 2 cut(s) 225, 279
Bme18I GGWCC 5 cut(s) 262, 289, 377, 731, 952
BmgT120I GGNCC 5 cut(s) 262, 289, 377, 731, 952
BmrFI CCNGG 2 cut(s) 225, 279
BmsI GCATC 2 cut(s) 200, 1071
BpiI GAAGAC 1 cut(s) 674
BpmI CTGGAG 2 cut(s) 386, 1092
BpuEI CTTGAG 1 cut(s) 1106
BpuMI CCSGG 1 cut(s) 279
BsaHI GRCGYC 1 cut(s) 250
BsaI GGTCTC 1 cut(s) 1088
BsaJI CCNNGG 3 cut(s) 147, 223, 278
BsaWI WCCGGW 1 cut(s) 550
Bsc4I CCNNNNNNNGG 1 cut(s) 800
Bse118I RCCGGY 1 cut(s) 800
Bse1I ACTGG 2 cut(s) 237, 1160
BseAI TCCGGA 1 cut(s) 550
BseBI CCWGG 1 cut(s) 225
BseDI CCNNGG 3 cut(s) 147, 223, 278
BseGI GGATG 4 cut(s) 241, 309, 547, 857
BseLI CCNNNNNNNGG 1 cut(s) 800
BseMII CTCAG 1 cut(s) 885
BseNI ACTGG 2 cut(s) 237, 1160
BseSI GKGCMC 1 cut(s) 970
BseXI GCAGC 3 cut(s) 130, 328, 704
Bsh1236I CGCG 1 cut(s) 993
BshFI GGCC 2 cut(s) 89, 277
BsiHKAI GWGCWC 3 cut(s) 140, 970, 1109
BsiSI CCGG 3 cut(s) 278, 551, 801
BslFI GGGAC 2 cut(s) 205, 776
BslI CCNNNNNNNGG 1 cut(s) 800
BsmAI GTCTC 2 cut(s) 257, 1088
BsmBI CGTCTC 1 cut(s) 257
BsmFI GGGAC 2 cut(s) 205, 776
BsmI GAATGC 3 cut(s) 114, 188, 629
BsnI GGCC 2 cut(s) 89, 277
Bso31I GGTCTC 1 cut(s) 1088
Bsp1286I GDGCHC 3 cut(s) 140, 970, 1109
Bsp13I TCCGGA 1 cut(s) 550
Bsp1407I TGTACA 1 cut(s) 67
Bsp143I GATC 5 cut(s) 648, 757, 762, 988, 1139
BspACI CCGC 4 cut(s) 631, 689, 993, 1051
BspANI GGCC 2 cut(s) 89, 277
BspCNI CTCAG 1 cut(s) 884
BspEI TCCGGA 1 cut(s) 550
BspFNI CGCG 1 cut(s) 993
BspHI TCATGA 1 cut(s) 580
BspMI ACCTGC 1 cut(s) 277
BspPI GGATC 2 cut(s) 656, 765
BspTNI GGTCTC 1 cut(s) 1088
BsrFI RCCGGY 1 cut(s) 800
BsrGI TGTACA 1 cut(s) 67
BsrI ACTGG 2 cut(s) 237, 1160
BssAI RCCGGY 1 cut(s) 800
BssECI CCNNGG 3 cut(s) 147, 223, 278
BssMI GATC 5 cut(s) 648, 757, 762, 988, 1139
BssNI GRCGYC 1 cut(s) 250
BssT1I CCWWGG 1 cut(s) 147
Bst2UI CCWGG 1 cut(s) 225
Bst4CI ACNGT 2 cut(s) 104, 680
BstACI GRCGYC 1 cut(s) 250
BstAPI GCANNNNNTGC 1 cut(s) 120
BstAUI TGTACA 1 cut(s) 67
BstC8I GCNNGC 4 cut(s) 125, 531, 629, 806
BstDEI CTNAG 2 cut(s) 569, 871
BstF5I GGATG 4 cut(s) 241, 309, 547, 857
BstFNI CGCG 1 cut(s) 993
BstKTI GATC 5 cut(s) 651, 760, 765, 991, 1142
BstMAI GTCTC 2 cut(s) 257, 1088
BstMBI GATC 5 cut(s) 648, 757, 762, 988, 1139
BstMWI GCNNNNNNNGC 3 cut(s) 120, 283, 361
BstNI CCWGG 1 cut(s) 225
BstNSI RCATGY 1 cut(s) 1088
BstSCI CCNGG 2 cut(s) 223, 277
BstSFI CTRYAG 1 cut(s) 45
BstSLI GKGCMC 1 cut(s) 970
BstUI CGCG 1 cut(s) 993
BstV1I GCAGC 3 cut(s) 130, 328, 704
BstV2I GAAGAC 1 cut(s) 674
BstX2I RGATCY 2 cut(s) 648, 1139
BstXI CCANNNNNNTGG 1 cut(s) 364
BstYI RGATCY 2 cut(s) 648, 1139
BsuRI GGCC 2 cut(s) 89, 277
BtsCI GGATG 4 cut(s) 241, 309, 547, 857
BtsI GCAGTG 2 cut(s) 186, 1060
BtsIMutI CAGTG 2 cut(s) 186, 1060
BveI ACCTGC 1 cut(s) 277
Cac8I GCNNGC 4 cut(s) 125, 531, 629, 806
CciI TCATGA 1 cut(s) 580
Cfr10I RCCGGY 1 cut(s) 800
Cfr13I GGNCC 5 cut(s) 262, 289, 377, 731, 952
Csp6I GTAC 1 cut(s) 68
CviAII CATG 7 cut(s) 79, 440, 581, 608, 725, 944, 1085
CviQI GTAC 1 cut(s) 68
DdeI CTNAG 2 cut(s) 569, 871
DpnI GATC 5 cut(s) 650, 759, 764, 990, 1141
DpnII GATC 5 cut(s) 648, 757, 762, 988, 1139
Ecl136II GAGCTC 1 cut(s) 138
Eco130I CCWWGG 1 cut(s) 147
Eco24I GRGCYC 1 cut(s) 140
Eco31I GGTCTC 1 cut(s) 1088
Eco47I GGWCC 5 cut(s) 262, 289, 377, 731, 952
Eco53kI GAGCTC 1 cut(s) 138
EcoICRI GAGCTC 1 cut(s) 138
EcoO109I RGGNCCY 1 cut(s) 377
EcoRI GAATTC 3 cut(s) 175, 929, 1001
EcoRII CCWGG 1 cut(s) 223
EcoT14I CCWWGG 1 cut(s) 147
EcoT22I ATGCAT 1 cut(s) 1086
EcoT38I GRGCYC 1 cut(s) 140
ErhI CCWWGG 1 cut(s) 147
Esp3I CGTCTC 1 cut(s) 257
FaeI CATG 7 cut(s) 82, 443, 584, 611, 728, 947, 1088
FaqI GGGAC 2 cut(s) 205, 776
FatI CATG 7 cut(s) 78, 439, 580, 607, 724, 943, 1084
FblI GTMKAC 1 cut(s) 48
Fnu4HI GCNGC 5 cut(s) 144, 317, 690, 693, 994
FokI GGATG 4 cut(s) 248, 296, 534, 864
FriOI GRGCYC 1 cut(s) 140
Fsp4HI GCNGC 5 cut(s) 144, 317, 690, 693, 994
FspBI CTAG 2 cut(s) 456, 783
GluI GCNGC 5 cut(s) 144, 317, 690, 693, 994
GsuI CTGGAG 2 cut(s) 386, 1092
HaeIII GGCC 2 cut(s) 89, 277
HapII CCGG 3 cut(s) 278, 551, 801
Hin1I GRCGYC 1 cut(s) 250
Hin1II CATG 7 cut(s) 82, 443, 584, 611, 728, 947, 1088
HinfI GANTC 5 cut(s) 13, 577, 636, 668, 1117
HpaII CCGG 3 cut(s) 278, 551, 801
HphI GGTGA 2 cut(s) 934, 1149
Hpy166II GTNNAC 3 cut(s) 49, 968, 1058
Hpy188III TCNNGA 5 cut(s) 551, 581, 652, 1114, 1135
Hpy8I GTNNAC 3 cut(s) 49, 968, 1058
HpyAV CCTTC 4 cut(s) 356, 744, 965, 1120
HpyCH4III ACNGT 2 cut(s) 104, 680
HpyCH4IV ACGT 1 cut(s) 250
HpyCH4V TGCA 7 cut(s) 186, 191, 461, 627, 724, 968, 1084
HpyF10VI GCNNNNNNNGC 3 cut(s) 120, 283, 361
HpyF3I CTNAG 2 cut(s) 569, 871
HpySE526I ACGT 1 cut(s) 250
Hsp92I GRCGYC 1 cut(s) 250
Hsp92II CATG 7 cut(s) 82, 443, 584, 611, 728, 947, 1088
Kpn2I TCCGGA 1 cut(s) 550
Kzo9I GATC 5 cut(s) 648, 757, 762, 988, 1139
LmnI GCTCC 3 cut(s) 367, 1073, 1112
Lsp1109I GCAGC 3 cut(s) 130, 328, 704
LweI GCATC 2 cut(s) 200, 1071
MaeI CTAG 2 cut(s) 456, 783
MaeII ACGT 1 cut(s) 250
MaeIII GTNAC 4 cut(s) 34, 922, 1024, 1162
MalI GATC 5 cut(s) 650, 759, 764, 990, 1141
MboI GATC 5 cut(s) 648, 757, 762, 988, 1139
MboII GAAGA 5 cut(s) 85, 184, 334, 674, 997
MflI RGATCY 2 cut(s) 648, 1139
MhlI GDGCHC 3 cut(s) 140, 970, 1109
MluCI AATT 6 cut(s) 175, 358, 929, 1001, 1029, 1150
MlyI GAGTC 1 cut(s) 662
MmeI TCCRAC 1 cut(s) 190
MnlI CCTC 9 cut(s) 100, 206, 253, 420, 462, 533, 566, 639, 786
Mph1103I ATGCAT 1 cut(s) 1086
MroI TCCGGA 1 cut(s) 550
MroXI GAANNNNTTC 1 cut(s) 659
MseI TTAA 8 cut(s) 167, 372, 675, 846, 902, 935, 1100, 1189
MslI CAYNNNNRTG 4 cut(s) 23, 585, 1065, 1089
MspI CCGG 3 cut(s) 278, 551, 801
MspR9I CCNGG 2 cut(s) 225, 279
Mva1269I GAATGC 3 cut(s) 114, 188, 629
MvaI CCWGG 1 cut(s) 225
MvnI CGCG 1 cut(s) 993
MwoI GCNNNNNNNGC 3 cut(s) 120, 283, 361
NciI CCSGG 1 cut(s) 279
NdeII GATC 5 cut(s) 648, 757, 762, 988, 1139
NlaIII CATG 7 cut(s) 82, 443, 584, 611, 728, 947, 1088
NmuCI GTSAC 2 cut(s) 34, 922
NsiI ATGCAT 1 cut(s) 1086
NspI RCATGY 1 cut(s) 1088
OliI CACNNNNGTG 1 cut(s) 23
PagI TCATGA 1 cut(s) 580
PctI GAATGC 3 cut(s) 114, 188, 629
PdmI GAANNNNTTC 1 cut(s) 659
PfeI GAWTC 4 cut(s) 13, 577, 636, 1117
PkrI GCNGC 5 cut(s) 145, 318, 691, 694, 995
PleI GAGTC 1 cut(s) 662
PpsI GAGTC 1 cut(s) 662
PpuMI RGGWCCY 1 cut(s) 377
PsiI TTATAA 1 cut(s) 537
Psp124BI GAGCTC 1 cut(s) 140
Psp5II RGGWCCY 1 cut(s) 377
Psp6I CCWGG 1 cut(s) 223
PspGI CCWGG 1 cut(s) 223
PspPI GGNCC 5 cut(s) 262, 289, 377, 731, 952
PspPPI RGGWCCY 1 cut(s) 377
PsuI RGATCY 2 cut(s) 648, 1139
RsaI GTAC 1 cut(s) 69
RsaNI GTAC 1 cut(s) 68
RseI CAYNNNNRTG 4 cut(s) 23, 585, 1065, 1089
SacI GAGCTC 1 cut(s) 140
SaqAI TTAA 8 cut(s) 167, 372, 675, 846, 902, 935, 1100, 1189
SatI GCNGC 5 cut(s) 144, 317, 690, 693, 994
Sau3AI GATC 5 cut(s) 648, 757, 762, 988, 1139
Sau96I GGNCC 5 cut(s) 262, 289, 377, 731, 952
SchI GAGTC 1 cut(s) 662
ScrFI CCNGG 2 cut(s) 225, 279
SduI GDGCHC 3 cut(s) 140, 970, 1109
SfaNI GCATC 2 cut(s) 200, 1071
SfcI CTRYAG 1 cut(s) 45
SinI GGWCC 5 cut(s) 262, 289, 377, 731, 952
SmiMI CAYNNNNRTG 4 cut(s) 23, 585, 1065, 1089
SmlI CTYRAG 1 cut(s) 1121
SmoI CTYRAG 1 cut(s) 1121
Sse9I AATT 6 cut(s) 175, 358, 929, 1001, 1029, 1150
SsiI CCGC 4 cut(s) 631, 689, 993, 1051
SspI AATATT 1 cut(s) 714
SspMI CTAG 2 cut(s) 456, 783
SstI GAGCTC 1 cut(s) 140
StyD4I CCNGG 2 cut(s) 223, 277
StyI CCWWGG 1 cut(s) 147
TaaI ACNGT 2 cut(s) 104, 680
TaiI ACGT 1 cut(s) 253
TaqI TCGA 1 cut(s) 134
TasI AATT 6 cut(s) 175, 358, 929, 1001, 1029, 1150
TatI WGTACW 1 cut(s) 67
TauI GCSGC 2 cut(s) 692, 996
TfiI GAWTC 4 cut(s) 13, 577, 636, 1117
Tru1I TTAA 8 cut(s) 167, 372, 675, 846, 902, 935, 1100, 1189
Tru9I TTAA 8 cut(s) 167, 372, 675, 846, 902, 935, 1100, 1189
TscAI CASTG 2 cut(s) 193, 1060
TseFI GTSAC 2 cut(s) 34, 922
TseI GCWGC 3 cut(s) 143, 316, 692
Tsp45I GTSAC 2 cut(s) 34, 922
TspDTI ATGAA 5 cut(s) 597, 636, 953, 1014, 1023
TspRI CASTG 2 cut(s) 193, 1060
VneI GTGCAC 1 cut(s) 966
VpaK11BI GGWCC 5 cut(s) 262, 289, 377, 731, 952
XapI RAATTY 3 cut(s) 175, 929, 1001
XceI RCATGY 1 cut(s) 1088
XmiI GTMKAC 1 cut(s) 48
XmnI GAANNNNTTC 1 cut(s) 659
XspI CTAG 2 cut(s) 456, 783
ZraI GACGTC 1 cut(s) 251
Zsp2I ATGCAT 1 cut(s) 1086
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.