Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0012656

Physical Location & Seq

Genomic Coordinates Forward (+)

53810944 .. 53815513

Gene Structure 4570 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0439400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1533 bp

ATGGGGAATTCATTTGGGTGCTCTGCCTCCGGCGAGAGGCTGGTATCGGCGGCGAGAGATGGAGATGTGATTGAAGCGAAGATGTTATTGGATTGCAACCCTTGCCTTGCTAAGTACTCAACCTTTGGTGGGCTTAACTCTCCTCTCCATTTCGCCGCCGCTAAAGGCCACAACGAGATTGTTTCGTTGCTTCTGGAGAATGGAGCTGATGTCAATTCCAGAAATTACTGTGGCCAGACAGCTTTGATGCAAGCTTGTCGATATGGACATTGGGAAGTTTTGCAAACGCTTCTGCTGTTTAGGTGCAATGTTACAAGAGCAGACTACCTTACAGGCAGAACAGCTCTTCATTTTGCTGCTGTAAATGGACATGTAAGATGTATAAGACTTGTTGTCGCTGACTTTGTTCCAAGTGTTCCTTATGAAGCTATGAATTCTCAGATAGATAGTGACAGAGGTGACGGTGCAAATGCGACAAGTAAAAATGAGCAAAGTGCTCTGTCCAAGTTTGTAAATAAGCCAGCAGATTGTGGCATTACCGCTCTTCATATGGCTGCATTGAATGGGTATTTTGATTGCGTACAGCTCCTACTTGATCTTCATGCAAATGTGGCAGCTGTTACATTTCATTATGGAACGTCTATGGATTTAATAGGAGCCGGAAGTTCTCCATTGCACTACGCTGCTTGTGGGGGTAACTTAAAATGCTGTCAGATCCTCCTTGCAAGAGGTGCTAGCAAGATGACTTTAAATTGCAATGGGTGGCTTCCTCTTGATGTTGCCAGAATGTGGGGGCGCCACTGGCTTGAACCGCTGCTAGCACCCAATTCCGACACAATAATACCGGCATTCCCCCTTTCTAATTACCTATCACTGCCTCTCATGAGCATACTGAACGTAGCAAGAGAGTGTGGATTCAAGTCTGGAACATCCTCAACCGATGAGGCTGATACTTGTGCTGTCTGCCTGGAAAGAGCATGTTTTGTTGCTGCAGAAGGATGTAAGCATGAGCTTTGTGTTAGATGCGCACTCTATCTCTGCTCAACAAGCAACATCCCTGCAGAAATGGTAGGCCCACCAGGGTCCATTCCATGCCCTTTTTGTAGGCATGGAATCATCTCGTTTGTAAAGTTGCCTGGTTCCCCAGCAAAGGAAAACAAAATACCCATGTCACTCGGCCTCTGTACCCCATGCATGCTTCATCGTGACCCTCACCGTGAATCCCCAGCTTGTGCTCCAGAGATAAAAAAGAACCGTGTAGCTTCAGTTTCTTCAGAACTACTCTGCCCGGTCACTTGTAGTCCATTTCCTTCCGTTGCCATTCCATTGTGCACTTGCAATGATGGTCCATGCCCACCATTTGAATCCCGGAATGCAGAAACTCAAGATGAATTTCCCGGTTCACAAGCGACGTCAACAGACCAGAGTAAAATGGAAGGGCCAAGACTTGAAAAAACAAGCTGTTCAAACATGTTCTGGAGCAGAAGAAGCTGCAGCAGGGAGCATCAGTGCAATGCTGAGATAAACGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002229 GO:0002239 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0016020 GO:0043207 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0071944 GO:0098542

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Lectin_legB Pkinase_Tyr

Protein Analysis

510

Amino Acids

54.9

Weight (kDa)

6.43

Isoelectric Point (pI)

45.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ank_2	PF12796	16 - 106	7.9e-14	Ankyrin repeats (3 copies)
Ank	PF00023	46 - 75	8.5e-09	Ankyrin repeat
Ank_2	PF12796	49 - 132	8.9e-18	Ankyrin repeats (3 copies)
Ank_4	PF13637	49 - 98	3.7e-13	Ankyrin repeats (many copies)
Ank_5	PF13857	64 - 109	4.5e-09	Ankyrin repeats (many copies)
Ank_2	PF12796	166 - 244	7.2e-12	Ankyrin repeats (3 copies)
Ank_5	PF13857	172 - 217	2.2e-06	Ankyrin repeats (many copies)
Ank	PF00023	178 - 207	2.5e-06	Ankyrin repeat
Ank_2	PF12796	220 - 268	1.5e-06	Ankyrin repeats (3 copies)
RING_XB3-XBAT31	PF24921	318 - 373	1.5e-17	E3 ubiquitin-protein ligase XB3/XBAT31 RING finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0012656)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g33120
malus_domestica	MD01G1230400.v1.1
prunus_persica	Prupe.2G321100_v2.0.a1
pyrus_communis	pycom01g23840
rosa_chinensis	RchiOBHm_Chr1g0334661 RchiOBHm_Chr1g0383191
rosa_laevigata	RLG00000026124
rosa_multiflora	Rmu_sc0008563.1_g000003
rosa_roxburghii	Rroxscaffold_4G00277520
rosa_rugosa	Rorug01G0126300 Rorug01G0439400
rosa_samantha	Rh1AG139900 Rh1AG465000 Rh1BG422400 Rh1CG131800 Rh1CG435600 Rh1DG143800 Rh1DG455100
rosa_wichuraiana	Rw1G040750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1415
Acc16I	TGCGCA	1 cut(s)	1027
AccB1I	GGYRCC	1 cut(s)	795
AccB7I	CCANNNNNTGG	1 cut(s)	789
AccBSI	CCGCTC	1 cut(s)	542
AciI	CCGC	5 cut(s)	50, 156, 159, 540, 812
AclWI	GGATC	1 cut(s)	709
AcoI	YGGCCR	1 cut(s)	232
AcsI	RAATTY	3 cut(s)	7, 433, 1391
AcuI	CTGAAG	2 cut(s)	1248, 1257
AcyI	GRCGYC	2 cut(s)	796, 1412
AfaI	GTAC	3 cut(s)	116, 582, 1186
AfiI	CCNNNNNNNGG	4 cut(s)	36, 129, 789, 1150
AflIII	ACRYGT	2 cut(s)	370, 1470
AgsI	TTSAA	7 cut(s)	74, 562, 809, 919, 1364, 1451, 1467
AhdI	GACNNNNNGTC	1 cut(s)	392
AjnI	CCWGG	3 cut(s)	966, 1078, 1135
AjuI	GAANNNNNNNTTGG	2 cut(s)	71, 103
Alw21I	GWGCWC	4 cut(s)	23, 499, 1237, 1334
Alw44I	GTGCAC	1 cut(s)	1330
AlwI	GGATC	1 cut(s)	709
AoxI	GGCC	5 cut(s)	166, 232, 1072, 1177, 1439
ApaLI	GTGCAC	1 cut(s)	1330
ApeKI	GCWGC	8 cut(s)	356, 554, 614, 683, 814, 989, 1491, 1494
ApoI	RAATTY	3 cut(s)	7, 433, 1391
AspLEI	GCGC	2 cut(s)	798, 1028
AspS9I	GGNCC	4 cut(s)	1073, 1083, 1346, 1439
AsuC2I	CCSGG	3 cut(s)	1289, 1369, 1398
AsuHPI	GGTGA	2 cut(s)	470, 1205
AsuNHI	GCTAGC	2 cut(s)	734, 817
AvaII	GGWCC	2 cut(s)	1083, 1346
BaeGI	GKGCMC	1 cut(s)	1334
BalI	TGGCCA	1 cut(s)	234
BanI	GGYRCC	1 cut(s)	795
Bbv12I	GWGCWC	4 cut(s)	23, 499, 1237, 1334
BbvI	GCAGC	8 cut(s)	343, 541, 626, 670, 801, 976, 1478, 1506
BccI	CCATC	2 cut(s)	53, 1337
BcgI	CGANNNNNNTGC	2 cut(s)	239, 273
BciT130I	CCWGG	3 cut(s)	968, 1080, 1137
BcnI	CCSGG	3 cut(s)	1289, 1369, 1398
BfaI	CTAG	2 cut(s)	735, 818
BfmI	CTRYAG	3 cut(s)	990, 1059, 1492
BfoI	RGCGCY	1 cut(s)	799
BmcAI	AGTACT	1 cut(s)	116
Bme1390I	CCNGG	6 cut(s)	968, 1080, 1137, 1289, 1369, 1398
Bme18I	GGWCC	2 cut(s)	1083, 1346
BmeRI	GACNNNNNGTC	1 cut(s)	392
BmgT120I	GGNCC	4 cut(s)	1073, 1083, 1346, 1439
BmiI	GGNNCC	4 cut(s)	658, 797, 1084, 1141
BmrFI	CCNGG	6 cut(s)	968, 1080, 1137, 1289, 1369, 1398
BmsI	GCATC	3 cut(s)	237, 1013, 1513
BmtI	GCTAGC	2 cut(s)	738, 821
BpmI	CTGGAG	3 cut(s)	215, 1221, 1498
BpuEI	CTTGAG	1 cut(s)	1368
BpuMI	CCSGG	3 cut(s)	1289, 1369, 1398
BsaHI	GRCGYC	2 cut(s)	796, 1412
BsaJI	CCNNGG	1 cut(s)	1079
BsaXI	ACNNNNNCTCC	4 cut(s)	195, 225, 1493, 1523
Bsc4I	CCNNNNNNNGG	4 cut(s)	36, 129, 789, 1150
Bse118I	RCCGGY	1 cut(s)	844
Bse1I	ACTGG	1 cut(s)	806
Bse3DI	GCAATG	5 cut(s)	313, 671, 763, 1345, 1519
BseBI	CCWGG	3 cut(s)	968, 1080, 1137
BseDI	CCNNGG	1 cut(s)	1079
BseGI	GGATG	3 cut(s)	929, 1004, 1053
BseLI	CCNNNNNNNGG	4 cut(s)	36, 129, 789, 1150
BseMI	GCAATG	5 cut(s)	313, 671, 763, 1345, 1519
BseMII	CTCAG	2 cut(s)	452, 1509
BseNI	ACTGG	1 cut(s)	806
BseRI	GAGGAG	1 cut(s)	132
BseSI	GKGCMC	1 cut(s)	1334
BseXI	GCAGC	8 cut(s)	343, 541, 626, 670, 801, 976, 1478, 1506
BseYI	CCCAGC	2 cut(s)	1144, 1225
BshFI	GGCC	5 cut(s)	168, 234, 1074, 1179, 1441
BshNI	GGYRCC	1 cut(s)	795
BsiHKAI	GWGCWC	4 cut(s)	23, 499, 1237, 1334
BsiSI	CCGG	6 cut(s)	30, 660, 845, 1289, 1369, 1398
BslI	CCNNNNNNNGG	4 cut(s)	36, 129, 789, 1150
BsmI	GAATGC	2 cut(s)	848, 1378
BsnI	GGCC	5 cut(s)	168, 234, 1074, 1179, 1441
Bsp1286I	GDGCHC	4 cut(s)	23, 499, 1237, 1334
Bsp143I	GATC	2 cut(s)	595, 714
BspACI	CCGC	5 cut(s)	50, 156, 159, 540, 812
BspANI	GGCC	5 cut(s)	168, 234, 1074, 1179, 1441
BspCNI	CTCAG	2 cut(s)	451, 1510
BspHI	TCATGA	1 cut(s)	882
BspLI	GGNNCC	4 cut(s)	658, 797, 1084, 1141
BspMAI	CTGCAG	3 cut(s)	994, 1063, 1496
BspOI	GCTAGC	2 cut(s)	738, 821
BspPI	GGATC	1 cut(s)	709
BspQI	GCTCTTC	2 cut(s)	351, 549
BspT107I	GGYRCC	1 cut(s)	795
BsrBI	CCGCTC	1 cut(s)	542
BsrDI	GCAATG	5 cut(s)	313, 671, 763, 1345, 1519
BsrFI	RCCGGY	1 cut(s)	844
BsrI	ACTGG	1 cut(s)	806
BssAI	RCCGGY	1 cut(s)	844
BssECI	CCNNGG	1 cut(s)	1079
BssMI	GATC	2 cut(s)	595, 714
BssNI	GRCGYC	2 cut(s)	796, 1412
Bst2UI	CCWGG	3 cut(s)	968, 1080, 1137
Bst4CI	ACNGT	4 cut(s)	230, 464, 1217, 1256
Bst6I	CTCTTC	2 cut(s)	351, 549
BstACI	GRCGYC	2 cut(s)	796, 1412
BstAPI	GCANNNNNTGC	2 cut(s)	102, 731
BstC8I	GCNNGC	5 cut(s)	252, 522, 736, 819, 1196
BstDEI	CTNAG	3 cut(s)	111, 438, 1518
BstF5I	GGATG	3 cut(s)	929, 1004, 1053
BstH2I	RGCGCY	1 cut(s)	799
BstHHI	GCGC	2 cut(s)	798, 1028
BstKTI	GATC	2 cut(s)	598, 717
BstMBI	GATC	2 cut(s)	595, 714
BstMWI	GCNNNNNNNGC	7 cut(s)	102, 611, 731, 802, 811, 1047, 1488
BstNI	CCWGG	3 cut(s)	968, 1080, 1137
BstNSI	RCATGY	4 cut(s)	374, 981, 1198, 1474
BstSCI	CCNGG	6 cut(s)	966, 1078, 1135, 1287, 1367, 1396
BstSFI	CTRYAG	3 cut(s)	990, 1059, 1492
BstSLI	GKGCMC	1 cut(s)	1334
BstV1I	GCAGC	8 cut(s)	343, 541, 626, 670, 801, 976, 1478, 1506
BstX2I	RGATCY	1 cut(s)	714
BstYI	RGATCY	1 cut(s)	714
BsuRI	GGCC	5 cut(s)	168, 234, 1074, 1179, 1441
BtsCI	GGATG	3 cut(s)	929, 1004, 1053
BtsI	GCAGTG	1 cut(s)	872
BtsIMutI	CAGTG	3 cut(s)	799, 872, 1514
Cac8I	GCNNGC	5 cut(s)	252, 522, 736, 819, 1196
CciI	TCATGA	1 cut(s)	882
CfoI	GCGC	2 cut(s)	798, 1028
Cfr10I	RCCGGY	1 cut(s)	844
Cfr13I	GGNCC	4 cut(s)	1073, 1083, 1346, 1439
Csp6I	GTAC	3 cut(s)	115, 581, 1185
CviQI	GTAC	3 cut(s)	115, 581, 1185
DdeI	CTNAG	3 cut(s)	111, 438, 1518
DinI	GGCGCC	1 cut(s)	797
DpnI	GATC	2 cut(s)	597, 716
DpnII	GATC	2 cut(s)	595, 714
DraI	TTTAAA	1 cut(s)	750
DriI	GACNNNNNGTC	1 cut(s)	392
EaeI	YGGCCR	1 cut(s)	232
Eam1104I	CTCTTC	2 cut(s)	351, 549
Eam1105I	GACNNNNNGTC	1 cut(s)	392
EarI	CTCTTC	2 cut(s)	351, 549
Eco47I	GGWCC	2 cut(s)	1083, 1346
Eco57I	CTGAAG	2 cut(s)	1248, 1257
EcoRI	GAATTC	2 cut(s)	7, 433
EcoRII	CCWGG	3 cut(s)	966, 1078, 1135
EcoT22I	ATGCAT	1 cut(s)	1196
EgeI	GGCGCC	1 cut(s)	797
EheI	GGCGCC	1 cut(s)	797
FalI	AAGNNNNNCTT	2 cut(s)	403, 435
FauNDI	CATATG	1 cut(s)	549
FokI	GGATG	3 cut(s)	916, 1011, 1040
FspAI	RTGCGCAY	1 cut(s)	1027
FspBI	CTAG	2 cut(s)	735, 818
FspI	TGCGCA	1 cut(s)	1027
GlaI	GCGC	2 cut(s)	797, 1027
GsaI	CCCAGC	2 cut(s)	1148, 1229
GsuI	CTGGAG	3 cut(s)	215, 1221, 1498
HaeII	RGCGCY	1 cut(s)	799
HaeIII	GGCC	5 cut(s)	168, 234, 1074, 1179, 1441
HapII	CCGG	6 cut(s)	30, 660, 845, 1289, 1369, 1398
HhaI	GCGC	2 cut(s)	798, 1028
Hin1I	GRCGYC	2 cut(s)	796, 1412
Hin6I	GCGC	2 cut(s)	796, 1026
HinP1I	GCGC	2 cut(s)	796, 1026
HincII	GTYRAC	1 cut(s)	1416
HindII	GTYRAC	1 cut(s)	1416
HindIII	AAGCTT	1 cut(s)	252
HinfI	GANTC	4 cut(s)	915, 1113, 1220, 1364
HpaII	CCGG	6 cut(s)	30, 660, 845, 1289, 1369, 1398
HphI	GGTGA	2 cut(s)	470, 1205
Hpy166II	GTNNAC	3 cut(s)	1332, 1403, 1416
Hpy188I	TCNGA	4 cut(s)	441, 714, 832, 1276
Hpy188III	TCNNGA	9 cut(s)	194, 219, 773, 883, 924, 1205, 1238, 1385, 1477
Hpy8I	GTNNAC	3 cut(s)	1332, 1403, 1416
Hpy99I	CGWCG	1 cut(s)	1414
HpyAV	CCTTC	3 cut(s)	989, 1320, 1430
HpyCH4III	ACNGT	4 cut(s)	230, 464, 1217, 1256
HpyCH4IV	ACGT	3 cut(s)	638, 897, 1412
HpyF10VI	GCNNNNNNNGC	7 cut(s)	102, 611, 731, 802, 811, 1047, 1488
HpyF3I	CTNAG	3 cut(s)	111, 438, 1518
HpySE526I	ACGT	3 cut(s)	638, 897, 1412
Hsp92I	GRCGYC	2 cut(s)	796, 1412
HspAI	GCGC	2 cut(s)	796, 1026
KasI	GGCGCC	1 cut(s)	795
Kzo9I	GATC	2 cut(s)	595, 714
LguI	GCTCTTC	2 cut(s)	351, 549
LmnI	GCTCC	6 cut(s)	203, 591, 656, 1240, 1479, 1501
Lsp1109I	GCAGC	8 cut(s)	343, 541, 626, 670, 801, 976, 1478, 1506
LweI	GCATC	3 cut(s)	237, 1013, 1513
MaeI	CTAG	2 cut(s)	735, 818
MaeII	ACGT	3 cut(s)	638, 897, 1412
MaeIII	GTNAC	8 cut(s)	310, 449, 458, 619, 695, 1170, 1205, 1291
MalI	GATC	2 cut(s)	597, 716
MbiI	CCGCTC	1 cut(s)	542
MboI	GATC	2 cut(s)	595, 714
MboII	GAAGA	6 cut(s)	91, 338, 536, 590, 1263, 1497
MflI	RGATCY	1 cut(s)	714
MhlI	GDGCHC	4 cut(s)	23, 499, 1237, 1334
MlsI	TGGCCA	1 cut(s)	234
MluCI	AATT	8 cut(s)	7, 214, 223, 433, 751, 826, 862, 1391
MluNI	TGGCCA	1 cut(s)	234
Mly113I	GGCGCC	1 cut(s)	796
MmeI	TCCRAC	1 cut(s)	855
Mox20I	TGGCCA	1 cut(s)	234
Mph1103I	ATGCAT	1 cut(s)	1196
MscI	TGGCCA	1 cut(s)	234
MseI	TTAA	4 cut(s)	135, 650, 701, 749
MslI	CAYNNNNRTG	2 cut(s)	16, 606
Msp20I	TGGCCA	1 cut(s)	234
MspA1I	CMGCKG	2 cut(s)	617, 814
MspI	CCGG	6 cut(s)	30, 660, 845, 1289, 1369, 1398
MspR9I	CCNGG	6 cut(s)	968, 1080, 1137, 1289, 1369, 1398
Mva1269I	GAATGC	2 cut(s)	848, 1378
MvaI	CCWGG	3 cut(s)	968, 1080, 1137
MwoI	GCNNNNNNNGC	7 cut(s)	102, 611, 731, 802, 811, 1047, 1488
NarI	GGCGCC	1 cut(s)	796
NciI	CCSGG	3 cut(s)	1289, 1369, 1398
NdeI	CATATG	1 cut(s)	549
NdeII	GATC	2 cut(s)	595, 714
NheI	GCTAGC	2 cut(s)	734, 817
NlaIV	GGNNCC	4 cut(s)	658, 797, 1084, 1141
NmeAIII	GCCGAG	1 cut(s)	1155
NmuCI	GTSAC	5 cut(s)	449, 458, 1170, 1205, 1291
NsbI	TGCGCA	1 cut(s)	1027
NsiI	ATGCAT	1 cut(s)	1196
NspI	RCATGY	4 cut(s)	374, 981, 1198, 1474
PaeI	GCATGC	1 cut(s)	1198
PagI	TCATGA	1 cut(s)	882
PciI	ACATGT	2 cut(s)	370, 1470
PciSI	GCTCTTC	2 cut(s)	351, 549
PctI	GAATGC	2 cut(s)	848, 1378
PfeI	GAWTC	4 cut(s)	915, 1113, 1220, 1364
PflMI	CCANNNNNTGG	1 cut(s)	789
PfoI	TCCNGGA	1 cut(s)	1367
PluTI	GGCGCC	1 cut(s)	799
PscI	ACATGT	2 cut(s)	370, 1470
Psp6I	CCWGG	3 cut(s)	966, 1078, 1135
PspFI	CCCAGC	2 cut(s)	1144, 1225
PspGI	CCWGG	3 cut(s)	966, 1078, 1135
PspN4I	GGNNCC	4 cut(s)	658, 797, 1084, 1141
PspPI	GGNCC	4 cut(s)	1073, 1083, 1346, 1439
PstI	CTGCAG	3 cut(s)	994, 1063, 1496
PsuI	RGATCY	1 cut(s)	714
PvuII	CAGCTG	1 cut(s)	617
RsaI	GTAC	3 cut(s)	116, 582, 1186
RsaNI	GTAC	3 cut(s)	115, 581, 1185
RseI	CAYNNNNRTG	2 cut(s)	16, 606
SapI	GCTCTTC	2 cut(s)	351, 549
SaqAI	TTAA	4 cut(s)	135, 650, 701, 749
Sau3AI	GATC	2 cut(s)	595, 714
Sau96I	GGNCC	4 cut(s)	1073, 1083, 1346, 1439
ScaI	AGTACT	1 cut(s)	116
ScrFI	CCNGG	6 cut(s)	968, 1080, 1137, 1289, 1369, 1398
SduI	GDGCHC	4 cut(s)	23, 499, 1237, 1334
SfaNI	GCATC	3 cut(s)	237, 1013, 1513
SfcI	CTRYAG	3 cut(s)	990, 1059, 1492
SfoI	GGCGCC	1 cut(s)	797
SinI	GGWCC	2 cut(s)	1083, 1346
SmiMI	CAYNNNNRTG	2 cut(s)	16, 606
SmlI	CTYRAG	1 cut(s)	1383
SmoI	CTYRAG	1 cut(s)	1383
SphI	GCATGC	1 cut(s)	1198
Sse9I	AATT	8 cut(s)	7, 214, 223, 433, 751, 826, 862, 1391
SsiI	CCGC	5 cut(s)	50, 156, 159, 540, 812
SspDI	GGCGCC	1 cut(s)	795
SspMI	CTAG	2 cut(s)	735, 818
StyD4I	CCNGG	6 cut(s)	966, 1078, 1135, 1287, 1367, 1396
TaaI	ACNGT	4 cut(s)	230, 464, 1217, 1256
TaiI	ACGT	3 cut(s)	641, 900, 1415
TaqI	TCGA	1 cut(s)	259
TasI	AATT	8 cut(s)	7, 214, 223, 433, 751, 826, 862, 1391
TatI	WGTACW	1 cut(s)	114
TauI	GCSGC	3 cut(s)	53, 158, 161
TfiI	GAWTC	4 cut(s)	915, 1113, 1220, 1364
Tru1I	TTAA	4 cut(s)	135, 650, 701, 749
Tru9I	TTAA	4 cut(s)	135, 650, 701, 749
TscAI	CASTG	3 cut(s)	806, 879, 1514
TseFI	GTSAC	5 cut(s)	449, 458, 1170, 1205, 1291
TseI	GCWGC	8 cut(s)	356, 554, 614, 683, 814, 989, 1491, 1494
Tsp45I	GTSAC	5 cut(s)	449, 458, 1170, 1205, 1291
TspDTI	ATGAA	8 cut(s)	338, 438, 446, 536, 590, 617, 1190, 1404
TspGWI	ACGGA	1 cut(s)	1303
TspRI	CASTG	3 cut(s)	806, 879, 1514
Van91I	CCANNNNNTGG	1 cut(s)	789
VneI	GTGCAC	1 cut(s)	1330
VpaK11BI	GGWCC	2 cut(s)	1083, 1346
XapI	RAATTY	3 cut(s)	7, 433, 1391
XceI	RCATGY	4 cut(s)	374, 981, 1198, 1474
XspI	CTAG	2 cut(s)	735, 818
ZraI	GACGTC	1 cut(s)	1413
ZrmI	AGTACT	1 cut(s)	116
Zsp2I	ATGCAT	1 cut(s)	1196

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.