Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0012656

Physical Location & Seq

Genomic Coordinates Forward (+)

69085797 .. 69088782

Gene Structure 2986 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG435600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2028 bp

ATGAGTTGCTTCAACTGGTTGCTCTATTTAGCTGCTGCTTTGGCCGTAAGTTGCGAGCTTCTAGTTGATTCAGCTAGTGACAAGAAGCACCACAGCGGACCAGTTGTTAATGTGACCAAGCACCTCATGTTCCCAGATTTCAACCTCTCCTACAACCCCCGAATCTTGAACGATGTAAAGCTCTTAGGCAGTGCCAAGCTTGCTTCAAAAACCAGTGCTATACAAATCCCCGACGAGTCTCATGTCACTGATCTCAGACACCAAGCCGGCCGAGCCATCTACTCTTCTTCAATCCGACTCCTGGACCCTCACACCGAAACCCCTGCCTCTTTCGAAACAACCTTCTCTTTTCAATTCCACAATGCCTCTTCATCTTCTCTTGAACGAATCCAAACTACTCAAAGCGGTGGTTATGGTAATGGTGGCAGTGGACTAGCCTTCGTCATCGTCCCGGATGAGTTCACGGTTGGCAGACCTGGTGCTTGGCTTGCCATGCTCAACGATGCTTGTGAAGATGACTACAAGGTCATAGCAATCGAATTCGACACACGTTTGAATCCAGAGTTTGGAGACCCTAATGATAACCATGTAGGTATCAACTTGGGGACTATTATCTCCACTGAAACAATCAACGCTTCTGATGTTGGTGTCTTCCTCAACGACGGTTCAGTCCACCGAGCTTGGATCAGCTACAACGGCTCACGCCGTTGGATGGAAATTCGTTTGGGATCAGACGACGGAAGTTACCCTTCAAAGCCAGTCTTCTCCGGCTCTCTTGACCTCTCCCCGTTTCTGAATGAGTACATGTTCGTTGGATTTTCGGCTTCCACAGGCAATCACACCCAAATCCACAGCGTGCTTTCTTGGAACTTCACTTCTGTTAGTCAAGCTTTTCTTCGTGTGCCATCAATGGAGACATGTGAGAGCAAGATTGTTGTTACTGAAAACTCTCGTGCTGAGCCTCCCGACACGTTCTTGATCTTTATAGCGGTGCTGGCACTTGCTATAGCTGTTATGCTTAGCCTTTACTATAACAGCAAGCGTAGAAGTGCAAATTCGGATAGTGCTAGTATAGTGTTGCCGGAGAAGAAGCAGAGACCGAGGCCTCCAAACAAGCCTAGAAGCTTCACAATCTCGGAGATTTCATTGGCGACTAGGTCTTTCGGAGAGCTAGAGATACTTGGAGGTGGATCAAAAGGGGTGTGCTACCGAGGGAAGCTTTCGAACGGATGTCAAGTGGCAGTGAAGCGGTTTTCGCCTCAATTTCTGAACTCACAAGGGTTGGATAGGAGAAGATTGATGAAGGAAATCAAGGGGATTAGCAGGGTTAGACACCCGAACTTAGTTTCCATTAGAGGATGGTGTCAGGACAAGAAAGAGACTATGGTTGTGTATGAGTTTTTTTCCAATGGAAGCCTTGATAAGTGGCTGTTTGGTGTTGGTGTTCTTCCGTGGACTCGGAGGTTCAAGGTTGTGAGAGATGTGGCTGAAGCACTCAGTTACTTGCATTCCAATCAATTGGCGCACAAGAACTTGAAGACCACCAATGTCTTTCTTGATGTTAGTTTCCGGGCTGTTCTAGGAGACTTTGGGTTTGTGCTATGTGGAGCAGAGTCGAGAAGGTTTGAATCGACGGTGAGTCAAAGTGCCGATGTGTTTGAATTCGGTCTCTTTGTGTTGGAAGTGGTGGGAGGGAGGAAGAGGTTGGAGGCAGAGTTGGGTGAATTGGAGGAGAGGGACTTGCTGGACTTCACCTGGAGAATGCATGAAATTGGTGAAATGAGGAGGGTTGTGGATAAGAGAATGGGTGCAGTGATCAATTTGGATCAAGCAATTAGGGTTTTGGAGATTGGATTGCTTTGCACACTGAATGCGAGCAAAGGGAGGCCTAGTATGGAGCAAGTTGTGGAGTTCCTTTGCATGGAGAGACCAATCCCTGAGTTGCCACAGACTCGACCTGTTGCTTTGTTCCCATACAACAGCACCAATGCTCTCTGTACAGGTTCTTCTTGTGCTCCTTTCAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002229 GO:0002239 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0016020 GO:0043207 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0071944 GO:0098542

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Lectin_legB Pkinase_Tyr

Protein Analysis

675

Amino Acids

74.98

Weight (kDa)

7.22

Isoelectric Point (pI)

41.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lectin_legB	PF00139	57 - 295	2.6e-51	Legume lectin domain
Lectin_L-type_dom	PF18483	63 - 285	5.2e-09	Legume lectin beta-barrel domain
Pkinase	PF00069	390 - 535	7e-24	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	392 - 532	1.5e-22	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012656)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g33120
malus_domestica	MD01G1230400.v1.1
prunus_persica	Prupe.2G321100_v2.0.a1
pyrus_communis	pycom01g23840
rosa_chinensis	RchiOBHm_Chr1g0334661 RchiOBHm_Chr1g0383191
rosa_laevigata	RLG00000026124
rosa_multiflora	Rmu_sc0008563.1_g000003
rosa_roxburghii	Rroxscaffold_4G00277520
rosa_rugosa	Rorug01G0126300 Rorug01G0439400
rosa_samantha	Rh1AG139900 Rh1AG465000 Rh1BG422400 Rh1CG131800 Rh1CG435600 Rh1DG143800 Rh1DG455100
rosa_wichuraiana	Rw1G040750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	524, 668
AccB7I	CCANNNNNTGG	1 cut(s)	566
AciI	CCGC	4 cut(s)	96, 405, 989, 1249
AclWI	GGATC	4 cut(s)	692, 736, 1198, 1833
AcoI	YGGCCR	2 cut(s)	42, 268
AcsI	RAATTY	4 cut(s)	539, 717, 1054, 1661
AcuI	CTGAAG	1 cut(s)	1509
AdeI	CACNNNGTG	1 cut(s)	856
AfaI	GTAC	2 cut(s)	803, 1999
AfiI	CCNNNNNNNGG	4 cut(s)	301, 566, 712, 1921
AflIII	ACRYGT	4 cut(s)	548, 804, 917, 969
AhdI	GACNNNNNGTC	1 cut(s)	1638
AjnI	CCWGG	3 cut(s)	300, 475, 1754
AloI	GAACNNNNNNTCC	2 cut(s)	1331, 1363
Alw21I	GWGCWC	1 cut(s)	2017
Alw26I	GTCTC	8 cut(s)	243, 564, 908, 1090, 1373, 1578, 1673, 1921
AlwI	GGATC	4 cut(s)	692, 736, 1198, 1833
AoxI	GGCC	4 cut(s)	42, 268, 1103, 1886
ApeKI	GCWGC	2 cut(s)	32, 35
ApoI	RAATTY	4 cut(s)	539, 717, 1054, 1661
ArsI	GACNNNNNNTTYG	2 cut(s)	1577, 1609
AspLEI	GCGC	1 cut(s)	1525
AspS9I	GGNCC	2 cut(s)	98, 304
AsuC2I	CCSGG	2 cut(s)	452, 1571
AsuHPI	GGTGA	4 cut(s)	1648, 1733, 1744, 1787
AsuII	TTCGAA	2 cut(s)	333, 1223
AvaII	GGWCC	2 cut(s)	98, 304
BarI	GAAGNNNNNNTAC	2 cut(s)	1990, 2022
BauI	CACGAG	1 cut(s)	951
BbsI	GAAGAC	3 cut(s)	643, 754, 1544
Bbv12I	GWGCWC	1 cut(s)	2017
BbvI	GCAGC	2 cut(s)	19, 22
BccI	CCATC	4 cut(s)	284, 706, 913, 1353
BceAI	ACGGC	3 cut(s)	29, 690, 712
BcgI	CGANNNNNNTGC	2 cut(s)	305, 339
BciT130I	CCWGG	3 cut(s)	302, 477, 1756
BclI	TGATCA	1 cut(s)	1815
BcnI	CCSGG	2 cut(s)	452, 1571
BcoDI	GTCTC	8 cut(s)	243, 564, 908, 1090, 1373, 1578, 1673, 1921
BfaI	CTAG	9 cut(s)	62, 75, 434, 1068, 1119, 1155, 1172, 1580, 1890
BfmI	CTRYAG	1 cut(s)	1005
BisI	GCNGC	2 cut(s)	33, 36
BlpI	GCTNAGC	2 cut(s)	957, 1019
BlsI	GCNGC	2 cut(s)	34, 37
Bme1390I	CCNGG	5 cut(s)	302, 452, 477, 1571, 1756
Bme18I	GGWCC	2 cut(s)	98, 304
BmeRI	GACNNNNNGTC	1 cut(s)	1638
BmgT120I	GGNCC	2 cut(s)	98, 304
BmiI	GGNNCC	1 cut(s)	306
BmrFI	CCNGG	5 cut(s)	302, 452, 477, 1571, 1756
BmsI	GCATC	1 cut(s)	493
BpiI	GAAGAC	3 cut(s)	643, 754, 1544
BpmI	CTGGAG	1 cut(s)	1777
Bpu1102I	GCTNAGC	2 cut(s)	957, 1019
Bpu14I	TTCGAA	2 cut(s)	333, 1223
BpuMI	CCSGG	2 cut(s)	452, 1571
BsaI	GGTCTC	4 cut(s)	564, 1090, 1673, 1921
BsaJI	CCNNGG	3 cut(s)	1100, 1210, 1451
BsaXI	ACNNNNNCTCC	4 cut(s)	1700, 1730, 1876, 1906
Bsc4I	CCNNNNNNNGG	4 cut(s)	301, 566, 712, 1921
Bse118I	RCCGGY	1 cut(s)	266
Bse1I	ACTGG	4 cut(s)	20, 101, 213, 758
BseBI	CCWGG	3 cut(s)	302, 477, 1756
BseDI	CCNNGG	3 cut(s)	1100, 1210, 1451
BseGI	GGATG	4 cut(s)	460, 717, 1235, 1364
BseLI	CCNNNNNNNGG	4 cut(s)	301, 566, 712, 1921
BseMII	CTCAG	4 cut(s)	268, 948, 1510, 1929
BseNI	ACTGG	4 cut(s)	20, 101, 213, 758
BseRI	GAGGAG	2 cut(s)	1745, 1798
BseX3I	CGGCCG	1 cut(s)	268
BseXI	GCAGC	2 cut(s)	19, 22
BsgI	GTGCAG	1 cut(s)	1830
Bsh1285I	CGRYCG	1 cut(s)	271
BshFI	GGCC	4 cut(s)	44, 270, 1105, 1888
BsiEI	CGRYCG	1 cut(s)	271
BsiHKAI	GWGCWC	1 cut(s)	2017
BsiSI	CCGG	5 cut(s)	267, 452, 768, 1082, 1570
BslFI	GGGAC	3 cut(s)	434, 619, 1751
BslI	CCNNNNNNNGG	4 cut(s)	301, 566, 712, 1921
BsmAI	GTCTC	8 cut(s)	243, 564, 908, 1090, 1373, 1578, 1673, 1921
BsmFI	GGGAC	3 cut(s)	434, 619, 1751
BsmI	GAATGC	3 cut(s)	1507, 1767, 1876
BsnI	GGCC	4 cut(s)	44, 270, 1105, 1888
Bso31I	GGTCTC	4 cut(s)	564, 1090, 1673, 1921
Bsp119I	TTCGAA	2 cut(s)	333, 1223
Bsp1286I	GDGCHC	1 cut(s)	2017
Bsp1407I	TGTACA	1 cut(s)	1997
Bsp143I	GATC	7 cut(s)	250, 684, 728, 978, 1190, 1815, 1825
Bsp1720I	GCTNAGC	2 cut(s)	957, 1019
BspACI	CCGC	4 cut(s)	96, 405, 989, 1249
BspANI	GGCC	4 cut(s)	44, 270, 1105, 1888
BspCNI	CTCAG	4 cut(s)	267, 949, 1509, 1930
BspLI	GGNNCC	1 cut(s)	306
BspPI	GGATC	4 cut(s)	692, 736, 1198, 1833
BspT104I	TTCGAA	2 cut(s)	333, 1223
BspTNI	GGTCTC	4 cut(s)	564, 1090, 1673, 1921
BsrFI	RCCGGY	1 cut(s)	266
BsrGI	TGTACA	1 cut(s)	1997
BsrI	ACTGG	4 cut(s)	20, 101, 213, 758
BssAI	RCCGGY	1 cut(s)	266
BssECI	CCNNGG	3 cut(s)	1100, 1210, 1451
BssMI	GATC	7 cut(s)	250, 684, 728, 978, 1190, 1815, 1825
BssSI	CACGAG	1 cut(s)	951
Bst2BI	CACGAG	1 cut(s)	951
Bst2UI	CCWGG	3 cut(s)	302, 477, 1756
Bst4CI	ACNGT	3 cut(s)	466, 665, 1636
Bst6I	CTCTTC	3 cut(s)	289, 373, 1694
BstAUI	TGTACA	1 cut(s)	1997
BstBI	TTCGAA	2 cut(s)	333, 1223
BstC8I	GCNNGC	8 cut(s)	56, 201, 268, 489, 857, 996, 1040, 1876
BstDEI	CTNAG	7 cut(s)	184, 254, 957, 1019, 1342, 1496, 1938
BstDSI	CCRYGG	1 cut(s)	1451
BstF5I	GGATG	4 cut(s)	460, 717, 1235, 1364
BstHHI	GCGC	1 cut(s)	1525
BstKTI	GATC	7 cut(s)	253, 687, 731, 981, 1193, 1818, 1828
BstMAI	GTCTC	8 cut(s)	243, 564, 908, 1090, 1373, 1578, 1673, 1921
BstMBI	GATC	7 cut(s)	250, 684, 728, 978, 1190, 1815, 1825
BstMCI	CGRYCG	1 cut(s)	271
BstMWI	GCNNNNNNNGC	8 cut(s)	41, 200, 272, 488, 493, 696, 995, 1255
BstNI	CCWGG	3 cut(s)	302, 477, 1756
BstNSI	RCATGY	2 cut(s)	808, 921
BstSCI	CCNGG	5 cut(s)	300, 450, 475, 1569, 1754
BstSFI	CTRYAG	1 cut(s)	1005
BstV1I	GCAGC	2 cut(s)	19, 22
BstV2I	GAAGAC	3 cut(s)	643, 754, 1544
BstXI	CCANNNNNNTGG	1 cut(s)	1519
BstZI	CGGCCG	1 cut(s)	268
BsuRI	GGCC	4 cut(s)	44, 270, 1105, 1888
BtgI	CCRYGG	1 cut(s)	1451
BtsCI	GGATG	4 cut(s)	460, 717, 1235, 1364
BtsI	GCAGTG	4 cut(s)	196, 433, 1248, 1818
BtsIMutI	CAGTG	8 cut(s)	196, 220, 246, 433, 618, 1248, 1818, 1865
Cac8I	GCNNGC	8 cut(s)	56, 201, 268, 489, 857, 996, 1040, 1876
CfoI	GCGC	1 cut(s)	1525
Cfr10I	RCCGGY	1 cut(s)	266
Cfr13I	GGNCC	2 cut(s)	98, 304
CsiI	ACCWGGT	1 cut(s)	475
Csp6I	GTAC	2 cut(s)	802, 1998
CspCI	CAANNNNNGTGG	2 cut(s)	662, 697
CviAII	CATG	8 cut(s)	127, 242, 493, 587, 805, 918, 1766, 1921
CviQI	GTAC	2 cut(s)	802, 1998
DdeI	CTNAG	7 cut(s)	184, 254, 957, 1019, 1342, 1496, 1938
DpnI	GATC	7 cut(s)	252, 686, 730, 980, 1192, 1817, 1827
DpnII	GATC	7 cut(s)	250, 684, 728, 978, 1190, 1815, 1825
DraIII	CACNNNGTG	1 cut(s)	856
DrdI	GACNNNNNNGTC	2 cut(s)	524, 668
DriI	GACNNNNNGTC	1 cut(s)	1638
DseDI	GACNNNNNNGTC	2 cut(s)	524, 668
EaeI	YGGCCR	2 cut(s)	42, 268
EagI	CGGCCG	1 cut(s)	268
Eam1104I	CTCTTC	3 cut(s)	289, 373, 1694
Eam1105I	GACNNNNNGTC	1 cut(s)	1638
EarI	CTCTTC	3 cut(s)	289, 373, 1694
EclXI	CGGCCG	1 cut(s)	268
Eco147I	AGGCCT	2 cut(s)	1105, 1888
Eco31I	GGTCTC	4 cut(s)	564, 1090, 1673, 1921
Eco47I	GGWCC	2 cut(s)	98, 304
Eco52I	CGGCCG	1 cut(s)	268
Eco57I	CTGAAG	1 cut(s)	1509
EcoRI	GAATTC	2 cut(s)	539, 1661
EcoRII	CCWGG	3 cut(s)	300, 475, 1754
EcoT22I	ATGCAT	1 cut(s)	1767
FaeI	CATG	8 cut(s)	130, 245, 496, 590, 808, 921, 1769, 1924
FalI	AAGNNNNNCTT	6 cut(s)	733, 765, 746, 778, 879, 911
FaqI	GGGAC	3 cut(s)	434, 619, 1751
FatI	CATG	8 cut(s)	126, 241, 492, 586, 804, 917, 1765, 1920
FbaI	TGATCA	1 cut(s)	1815
Fnu4HI	GCNGC	2 cut(s)	33, 36
FokI	GGATG	4 cut(s)	467, 724, 1242, 1371
Fsp4HI	GCNGC	2 cut(s)	33, 36
FspBI	CTAG	9 cut(s)	62, 75, 434, 1068, 1119, 1155, 1172, 1580, 1890
GlaI	GCGC	1 cut(s)	1524
GluI	GCNGC	2 cut(s)	33, 36
GsuI	CTGGAG	1 cut(s)	1777
HaeIII	GGCC	4 cut(s)	44, 270, 1105, 1888
HapII	CCGG	5 cut(s)	267, 452, 768, 1082, 1570
HhaI	GCGC	1 cut(s)	1525
Hin1II	CATG	8 cut(s)	130, 245, 496, 590, 808, 921, 1769, 1924
Hin6I	GCGC	1 cut(s)	1523
HinP1I	GCGC	1 cut(s)	1523
HindIII	AAGCTT	4 cut(s)	197, 888, 1123, 1217
HpaII	CCGG	5 cut(s)	267, 452, 768, 1082, 1570
HphI	GGTGA	4 cut(s)	1648, 1733, 1744, 1787
Hpy166II	GTNNAC	4 cut(s)	431, 462, 673, 1455
Hpy188III	TCNNGA	9 cut(s)	166, 380, 560, 776, 965, 976, 1367, 1556, 1617
Hpy8I	GTNNAC	4 cut(s)	431, 462, 673, 1455
Hpy99I	CGWCG	4 cut(s)	236, 665, 740, 1636
HpyAV	CCTTC	5 cut(s)	352, 448, 759, 1297, 1614
HpyCH4III	ACNGT	3 cut(s)	466, 665, 1636
HpyCH4IV	ACGT	2 cut(s)	550, 971
HpyCH4V	TGCA	6 cut(s)	1052, 1507, 1765, 1811, 1863, 1920
HpyF10VI	GCNNNNNNNGC	8 cut(s)	41, 200, 272, 488, 493, 696, 995, 1255
HpyF3I	CTNAG	7 cut(s)	184, 254, 957, 1019, 1342, 1496, 1938
HpySE526I	ACGT	2 cut(s)	550, 971
Hsp92II	CATG	8 cut(s)	130, 245, 496, 590, 808, 921, 1769, 1924
HspAI	GCGC	1 cut(s)	1523
KroI	GCCGGC	1 cut(s)	266
KroNI	GCCGGC	1 cut(s)	268
Ksp22I	TGATCA	1 cut(s)	1815
Kzo9I	GATC	7 cut(s)	250, 684, 728, 978, 1190, 1815, 1825
LmnI	GCTCC	3 cut(s)	1607, 1897, 2020
Lsp1109I	GCAGC	2 cut(s)	19, 22
LweI	GCATC	1 cut(s)	493
MabI	ACCWGGT	1 cut(s)	475
MaeI	CTAG	9 cut(s)	62, 75, 434, 1068, 1119, 1155, 1172, 1580, 1890
MaeII	ACGT	2 cut(s)	550, 971
MaeIII	GTNAC	6 cut(s)	77, 112, 244, 743, 937, 1499
MalI	GATC	7 cut(s)	252, 686, 730, 980, 1192, 1817, 1827
MboI	GATC	7 cut(s)	250, 684, 728, 978, 1190, 1815, 1825
MfeI	CAATTG	1 cut(s)	1517
MhlI	GDGCHC	1 cut(s)	2017
MlyI	GAGTC	6 cut(s)	245, 291, 1450, 1622, 1648, 1945
MmeI	TCCRAC	6 cut(s)	319, 689, 793, 1263, 1659, 1686
Mph1103I	ATGCAT	1 cut(s)	1767
MroNI	GCCGGC	1 cut(s)	266
MseI	TTAA	1 cut(s)	108
MspA1I	CMGCKG	1 cut(s)	96
MspI	CCGG	5 cut(s)	267, 452, 768, 1082, 1570
MspR9I	CCNGG	5 cut(s)	302, 452, 477, 1571, 1756
MunI	CAATTG	1 cut(s)	1517
Mva1269I	GAATGC	3 cut(s)	1507, 1767, 1876
MvaI	CCWGG	3 cut(s)	302, 477, 1756
MwoI	GCNNNNNNNGC	8 cut(s)	41, 200, 272, 488, 493, 696, 995, 1255
NaeI	GCCGGC	1 cut(s)	268
NciI	CCSGG	2 cut(s)	452, 1571
NdeII	GATC	7 cut(s)	250, 684, 728, 978, 1190, 1815, 1825
NgoMIV	GCCGGC	1 cut(s)	266
NlaIII	CATG	8 cut(s)	130, 245, 496, 590, 808, 921, 1769, 1924
NlaIV	GGNNCC	1 cut(s)	306
NmeAIII	GCCGAG	1 cut(s)	296
NmuCI	GTSAC	3 cut(s)	77, 112, 244
NsiI	ATGCAT	1 cut(s)	1767
NspI	RCATGY	2 cut(s)	808, 921
NspV	TTCGAA	2 cut(s)	333, 1223
PceI	AGGCCT	2 cut(s)	1105, 1888
PciI	ACATGT	2 cut(s)	804, 917
PctI	GAATGC	3 cut(s)	1507, 1767, 1876
PdiI	GCCGGC	1 cut(s)	268
PfeI	GAWTC	5 cut(s)	68, 162, 387, 556, 1628
PflFI	GACNNNGTC	1 cut(s)	1156
PflMI	CCANNNNNTGG	1 cut(s)	566
PfoI	TCCNGGA	2 cut(s)	300, 450
PkrI	GCNGC	2 cut(s)	34, 37
PleI	GAGTC	6 cut(s)	244, 291, 1450, 1621, 1647, 1945
PpsI	GAGTC	6 cut(s)	244, 291, 1450, 1621, 1647, 1945
PscI	ACATGT	2 cut(s)	804, 917
Psp6I	CCWGG	3 cut(s)	300, 475, 1754
PspGI	CCWGG	3 cut(s)	300, 475, 1754
PspN4I	GGNNCC	1 cut(s)	306
PspPI	GGNCC	2 cut(s)	98, 304
PsyI	GACNNNGTC	1 cut(s)	1156
RsaI	GTAC	2 cut(s)	803, 1999
RsaNI	GTAC	2 cut(s)	802, 1998
SaqAI	TTAA	1 cut(s)	108
SatI	GCNGC	2 cut(s)	33, 36
Sau3AI	GATC	7 cut(s)	250, 684, 728, 978, 1190, 1815, 1825
Sau96I	GGNCC	2 cut(s)	98, 304
SchI	GAGTC	6 cut(s)	245, 291, 1450, 1622, 1648, 1945
ScrFI	CCNGG	5 cut(s)	302, 452, 477, 1571, 1756
SduI	GDGCHC	1 cut(s)	2017
SexAI	ACCWGGT	1 cut(s)	475
SfaNI	GCATC	1 cut(s)	493
SfcI	CTRYAG	1 cut(s)	1005
SfuI	TTCGAA	2 cut(s)	333, 1223
SinI	GGWCC	2 cut(s)	98, 304
SseBI	AGGCCT	2 cut(s)	1105, 1888
SsiI	CCGC	4 cut(s)	96, 405, 989, 1249
SspMI	CTAG	9 cut(s)	62, 75, 434, 1068, 1119, 1155, 1172, 1580, 1890
StuI	AGGCCT	2 cut(s)	1105, 1888
StyD4I	CCNGG	5 cut(s)	300, 450, 475, 1569, 1754
TaaI	ACNGT	3 cut(s)	466, 665, 1636
TaiI	ACGT	2 cut(s)	553, 974
TaqI	TCGA	7 cut(s)	333, 537, 543, 1223, 1616, 1631, 1954
TaqII	GACCGA	2 cut(s)	1114, 1655
TatI	WGTACW	2 cut(s)	801, 1997
TfiI	GAWTC	5 cut(s)	68, 162, 387, 556, 1628
Tru1I	TTAA	1 cut(s)	108
Tru9I	TTAA	1 cut(s)	108
TscAI	CASTG	8 cut(s)	196, 220, 253, 433, 625, 1248, 1818, 1872
TseFI	GTSAC	3 cut(s)	77, 112, 244
TseI	GCWGC	2 cut(s)	32, 35
Tsp45I	GTSAC	3 cut(s)	77, 112, 244
TspDTI	ATGAA	4 cut(s)	360, 1134, 1316, 1782
TspGWI	ACGGA	3 cut(s)	753, 1242, 1440
TspRI	CASTG	8 cut(s)	196, 220, 253, 433, 625, 1248, 1818, 1872
Tth111I	GACNNNGTC	1 cut(s)	1156
Van91I	CCANNNNNTGG	1 cut(s)	566
VpaK11BI	GGWCC	2 cut(s)	98, 304
XapI	RAATTY	4 cut(s)	539, 717, 1054, 1661
XceI	RCATGY	2 cut(s)	808, 921
XspI	CTAG	9 cut(s)	62, 75, 434, 1068, 1119, 1155, 1172, 1580, 1890
Zsp2I	ATGCAT	1 cut(s)	1767

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.