Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0005082

Physical Location & Seq

Genomic Coordinates Reverse (-)

5938415 .. 5944809

Gene Structure 6395 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0074800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1734 bp

ATGAGGCTCCGACTCGCTCTGCTGTGTCTCTGCTTCGTCACTATTCCTCGGCTCGAATCCCCAGTCGCGGCCTCGGCCGAGTCGAACTCGGTGCTGGAGGAGGAGATCAATGCCGAGTCGGAAAACTCGTCGCTGGCGAGATCTGGTAACGACAGCTTCGCCAACATGATTGATCGGGCTCTCGAGCGCGAGTTCCCTGAGAACGAGCAAAATCAAGCCGCGGACTCTGGTAGCTTCAATAATAGCGTTAATGAACAGCAGGCGACTCTGGAGACTGTTGCTAGAGTTAAGTCCAAGAAAAATGACAGCAAGGAGGAGAAGTCATTTCAATTTCATGATGTTTTCCATCTGGAGAATGAGAATGGAGCAGAAGATATGCCTACACTAATAGATCGGAAGGATAATGTTTTTATTATTTCCAATCTCAAGTCAAAGTATCCTGTGCTGCAAGTGGACTTGAGACTGATATCAGATCTGGTAGTTGTCATTGTCTCTGCAACATGTGGTGGCATTGCCTTCGCCTGTGCTGGACAACCTGTCATTACTGGATACTTACTAGCAGGATCTGCCATTGGACCTGGAGGCTTGAGTTTTGTCAGTGAAATGGTCCAAGTTGAGACAGTGGCTCAGTTTGGAGTGATATTTCTTCTTTTTGCATTGGGCCTGGAATTCTCAGCTGCTAAGCTTCGGGTTGTTCGAGCAGTGGCTGTTTTGGGAGGTTTACTGCAGACTTTCCTATTTATGTGCTTGTGTGGAATAACAGCCTCGTTATGTGGTGGAAGACCTTCTGAAGGGGTATTTGTTGGTGCATTTCTTTCTATGTCTTCGACAGCAGTGGTTTTGAAATTCTTGATGGAAAGAAATAGTATTAATGCTCTTCATGGTCAAGTCACAGTTGGCACTCTTATAATGCAGGACTGTGCTGTGGGTTTGCTATTTGCTCTGCTTCCAGTTCTTGGTGGCACTTCTGGTATTCTTCAAGGAGTAATATCCATGACCAAATCGTTGGTGATCTTGCTTACATTTTTGGCCACATTATCAATATTATCACGTTCTTGTGTACCATGGTTCCTTAAGCTTATGATAAGCCTATCTTCTCAGACTAATGAACTCTATCAATTGGCAGCTGTGGCATTCTGCTTACTTGTCGCTTGGTGTAGTGATAAGCTGGGTTTAAGTCTTGAACTGGGTTCCTTTGCGGCAGGAGTGATGATATCAACAACTGATCTTGGTCAACATACACTTGAACAGGTTGAGCCCATTCGCAATATGTTTGCCGCTCTTTTTCTCGCTAGCATTGGGATGTTAATAGATGTTCATTTCCTTTGGAATCATGTTGATATTTTATTAGCAGCTGTTACATTGGTAATCATCGTAAAAACTGTAGTGGTTGCTACTGTTGTCAAGGGATTTGGATACAACAACAAGACTTCCCTTCTTGTTGGAATGTCTTTGGCACAAATCGGAGAATTTGCTTTTGTTTTACTAAGTCGCGCTTCTAATCTTCATCTGGTAGAGGGTAAACTGTATGTGTTACTTCTAGGCACAACAGCTCTTAGTCTGGTCACTACACCATTGCTGTTCAAGATGATTCCTGCTGTTGTTCATCTTGGGGTGTTGTTGCGGTGGCTCTCCCCTGATAGCCTAAGTGAGATTGGCTTCAAAGGAGATAGCTTTCGCTCAGATGGTGCTAAGCGTATTGCTTTCTTGGTCCAAGAATCTCATCATTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

577

Amino Acids

62.08

Weight (kDa)

5.56

Isoelectric Point (pI)

34.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_H_Exchanger	PF00999	163 - 529	1.3e-76	Sodium/hydrogen exchanger, transmembrane

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005082)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35920 AT4G35920 AT4G35920 AT4G35920 AT4G35920
fragaria_vesca	FvH4_1g11310 FvH4_1g11310 FvH4_1g11310 FvH4_1g11310 FvH4_1g11310
malus_domestica	MD02G1127400.v1.1 MD15G1241400.v1.1
prunus_persica	Prupe.7G172600_v2.0.a1 Prupe.7G172600_v2.0.a1 Prupe.7G172600_v2.0.a1 Prupe.7G172600_v2.0.a1 Prupe.7G172600_v2.0.a1 Prupe.7G172600_v2.0.a1
pyrus_communis	pycom02g09950 pycom15g21290
rosa_chinensis	RchiOBHm_Chr2g0098791
rosa_laevigata	RLG00000016828
rosa_multiflora	Rmu_sc0002776.1_g000035
rosa_roxburghii	Rroxscaffold_2G00143700
rosa_rugosa	Rorug02G0074800
rosa_samantha	Rh2AG122600 Rh2BG126300 Rh2CG127200 Rh2DG128200
rosa_wichuraiana	Rw0G004270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	908
AccB7I	CCANNNNNTGG	1 cut(s)	956
AccBSI	CCGCTC	1 cut(s)	1280
AccII	CGCG	4 cut(s)	68, 189, 221, 1494
AciI	CCGC	6 cut(s)	68, 219, 221, 1199, 1278, 1624
AclWI	GGATC	1 cut(s)	571
AcoI	YGGCCR	2 cut(s)	75, 1029
AcsI	RAATTY	3 cut(s)	668, 845, 1469
AcuI	CTGAAG	1 cut(s)	810
AfaI	GTAC	1 cut(s)	1062
AfiI	CCNNNNNNNGG	3 cut(s)	67, 791, 956
AflII	CTTAAG	1 cut(s)	1073
AflIII	ACRYGT	1 cut(s)	500
AgsI	TTSAA	8 cut(s)	238, 329, 844, 980, 1184, 1247, 1585, 1663
AhdI	GACNNNNNGTC	1 cut(s)	536
AjnI	CCWGG	2 cut(s)	577, 663
Alw26I	GTCTC	5 cut(s)	32, 266, 454, 496, 611
AlwI	GGATC	1 cut(s)	571
AlwNI	CAGNNNCTG	2 cut(s)	566, 707
Ama87I	CYCGRG	1 cut(s)	182
AoxI	GGCC	4 cut(s)	69, 75, 661, 1029
ApeKI	GCWGC	4 cut(s)	445, 677, 1124, 1352
ApoI	RAATTY	3 cut(s)	668, 845, 1469
ArsI	GACNNNNNNTTYG	2 cut(s)	48, 80
AseI	ATTAAT	1 cut(s)	870
Asp700I	GAANNNNTTC	1 cut(s)	784
AspLEI	GCGC	2 cut(s)	189, 1496
AspS9I	GGNCC	4 cut(s)	575, 607, 661, 1711
AsuHPI	GGTGA	1 cut(s)	1021
AsuNHI	GCTAGC	1 cut(s)	1292
AvaI	CYCGRG	1 cut(s)	182
AvaII	GGWCC	3 cut(s)	575, 607, 1711
BalI	TGGCCA	1 cut(s)	1031
BanII	GRGCYC	2 cut(s)	181, 1260
BbsI	GAAGAC	2 cut(s)	787, 816
BbvI	GCAGC	4 cut(s)	432, 664, 1136, 1364
BccI	CCATC	3 cut(s)	354, 847, 1679
BcgI	CGANNNNNNTGC	4 cut(s)	73, 107, 499, 533
BciT130I	CCWGG	2 cut(s)	579, 665
BciVI	GTATCC	3 cut(s)	447, 542, 1409
BcoDI	GTCTC	5 cut(s)	32, 266, 454, 496, 611
BfaI	CTAG	4 cut(s)	282, 557, 1293, 1541
BfmI	CTRYAG	2 cut(s)	725, 1383
BfrI	CTTAAG	1 cut(s)	1073
BfuI	GTATCC	3 cut(s)	447, 542, 1409
BglII	AGATCT	2 cut(s)	140, 472
BisI	GCNGC	8 cut(s)	69, 219, 446, 678, 1125, 1200, 1278, 1353
BlpI	GCTNAGC	2 cut(s)	681, 1692
BlsI	GCNGC	8 cut(s)	70, 220, 447, 679, 1126, 1201, 1279, 1354
Bme1390I	CCNGG	2 cut(s)	579, 665
Bme18I	GGWCC	3 cut(s)	575, 607, 1711
BmeRI	GACNNNNNGTC	1 cut(s)	536
BmeT110I	CYCGRG	1 cut(s)	182
BmgT120I	GGNCC	4 cut(s)	575, 607, 661, 1711
BmiI	GGNNCC	3 cut(s)	8, 1070, 1192
BmrFI	CCNGG	2 cut(s)	579, 665
BmrI	ACTGGG	2 cut(s)	56, 1196
BmtI	GCTAGC	1 cut(s)	1296
BmuI	ACTGGG	2 cut(s)	56, 1196
BpiI	GAAGAC	2 cut(s)	787, 816
BplI	GAGNNNNNCTC	2 cut(s)	71, 103
BpmI	CTGGAG	4 cut(s)	116, 290, 371, 600
Bpu1102I	GCTNAGC	2 cut(s)	681, 1692
BpuEI	CTTGAG	3 cut(s)	410, 478, 607
BsaJI	CCNNGG	4 cut(s)	47, 72, 219, 1064
BsaXI	ACNNNNNCTCC	2 cut(s)	305, 335
Bsc4I	CCNNNNNNNGG	3 cut(s)	67, 791, 956
Bse1I	ACTGG	4 cut(s)	62, 550, 950, 1191
Bse3DI	GCAATG	2 cut(s)	510, 1574
BseBI	CCWGG	2 cut(s)	579, 665
BseDI	CCNNGG	4 cut(s)	47, 72, 219, 1064
BseGI	GGATG	1 cut(s)	1308
BseLI	CCNNNNNNNGG	3 cut(s)	67, 791, 956
BseMI	GCAATG	2 cut(s)	510, 1574
BseMII	CTCAG	5 cut(s)	189, 641, 687, 1112, 1695
BseNI	ACTGG	4 cut(s)	62, 550, 950, 1191
BseRI	GAGGAG	3 cut(s)	113, 116, 329
BseX3I	CGGCCG	1 cut(s)	75
BseXI	GCAGC	4 cut(s)	432, 664, 1136, 1364
BseYI	CCCAGC	1 cut(s)	1168
Bsh1236I	CGCG	4 cut(s)	68, 189, 221, 1494
Bsh1285I	CGRYCG	1 cut(s)	78
BshFI	GGCC	4 cut(s)	71, 77, 663, 1031
BsiEI	CGRYCG	1 cut(s)	78
BsiHKCI	CYCGRG	1 cut(s)	182
BslI	CCNNNNNNNGG	3 cut(s)	67, 791, 956
BsmAI	GTCTC	5 cut(s)	32, 266, 454, 496, 611
BsmI	GAATGC	1 cut(s)	1133
BsnI	GGCC	4 cut(s)	71, 77, 663, 1031
BsoBI	CYCGRG	1 cut(s)	182
Bsp1286I	GDGCHC	2 cut(s)	181, 1260
Bsp143I	GATC	8 cut(s)	105, 140, 172, 391, 472, 563, 1011, 1225
Bsp1720I	GCTNAGC	2 cut(s)	681, 1692
Bsp19I	CCATGG	1 cut(s)	1064
BspACI	CCGC	6 cut(s)	68, 219, 221, 1199, 1278, 1624
BspANI	GGCC	4 cut(s)	71, 77, 663, 1031
BspCNI	CTCAG	5 cut(s)	190, 640, 686, 1111, 1694
BspFNI	CGCG	4 cut(s)	68, 189, 221, 1494
BspHI	TCATGA	1 cut(s)	334
BspLI	GGNNCC	3 cut(s)	8, 1070, 1192
BspMAI	CTGCAG	1 cut(s)	729
BspOI	GCTAGC	1 cut(s)	1296
BspPI	GGATC	1 cut(s)	571
BspQI	GCTCTTC	1 cut(s)	882
BspTI	CTTAAG	1 cut(s)	1073
BsrBI	CCGCTC	1 cut(s)	1280
BsrDI	GCAATG	2 cut(s)	510, 1574
BsrI	ACTGG	4 cut(s)	62, 550, 950, 1191
BssECI	CCNNGG	4 cut(s)	47, 72, 219, 1064
BssMI	GATC	8 cut(s)	105, 140, 172, 391, 472, 563, 1011, 1225
BssT1I	CCWWGG	1 cut(s)	1064
Bst2UI	CCWGG	2 cut(s)	579, 665
Bst4CI	ACNGT	7 cut(s)	277, 622, 895, 920, 1384, 1399, 1527
Bst6I	CTCTTC	1 cut(s)	882
BstAFI	CTTAAG	1 cut(s)	1073
BstAPI	GCANNNNNTGC	1 cut(s)	566
BstC8I	GCNNGC	3 cut(s)	135, 261, 1294
BstDSI	CCRYGG	2 cut(s)	219, 1064
BstENI	CCTNNNNNAGG	1 cut(s)	789
BstF5I	GGATG	1 cut(s)	1308
BstFNI	CGCG	4 cut(s)	68, 189, 221, 1494
BstHHI	GCGC	2 cut(s)	189, 1496
BstKTI	GATC	8 cut(s)	108, 143, 175, 394, 475, 566, 1014, 1228
BstMAI	GTCTC	5 cut(s)	32, 266, 454, 496, 611
BstMBI	GATC	8 cut(s)	105, 140, 172, 391, 472, 563, 1011, 1225
BstMCI	CGRYCG	1 cut(s)	78
BstMWI	GCNNNNNNNGC	3 cut(s)	74, 566, 1130
BstNI	CCWGG	2 cut(s)	579, 665
BstNSI	RCATGY	1 cut(s)	504
BstSCI	CCNGG	2 cut(s)	577, 663
BstSFI	CTRYAG	2 cut(s)	725, 1383
BstUI	CGCG	4 cut(s)	68, 189, 221, 1494
BstV1I	GCAGC	4 cut(s)	432, 664, 1136, 1364
BstV2I	GAAGAC	2 cut(s)	787, 816
BstX2I	RGATCY	3 cut(s)	140, 472, 563
BstXI	CCANNNNNNTGG	1 cut(s)	1006
BstYI	RGATCY	3 cut(s)	140, 472, 563
BstZI	CGGCCG	1 cut(s)	75
BsuI	GTATCC	3 cut(s)	447, 542, 1409
BsuRI	GGCC	4 cut(s)	71, 77, 663, 1031
BtgI	CCRYGG	2 cut(s)	219, 1064
BtsCI	GGATG	1 cut(s)	1308
BtsI	GCAGTG	2 cut(s)	708, 840
BtsIMutI	CAGTG	4 cut(s)	604, 627, 708, 840
Cac8I	GCNNGC	3 cut(s)	135, 261, 1294
CaiI	CAGNNNCTG	2 cut(s)	566, 707
CciI	TCATGA	1 cut(s)	334
CfoI	GCGC	2 cut(s)	189, 1496
Cfr13I	GGNCC	4 cut(s)	575, 607, 661, 1711
Cfr42I	CCGCGG	1 cut(s)	222
Csp6I	GTAC	1 cut(s)	1061
CviAII	CATG	7 cut(s)	166, 335, 501, 881, 994, 1065, 1334
CviQI	GTAC	1 cut(s)	1061
DpnI	GATC	8 cut(s)	107, 142, 174, 393, 474, 565, 1013, 1227
DpnII	GATC	8 cut(s)	105, 140, 172, 391, 472, 563, 1011, 1225
DriI	GACNNNNNGTC	1 cut(s)	536
EaeI	YGGCCR	2 cut(s)	75, 1029
EagI	CGGCCG	1 cut(s)	75
Eam1104I	CTCTTC	1 cut(s)	882
Eam1105I	GACNNNNNGTC	1 cut(s)	536
EarI	CTCTTC	1 cut(s)	882
EclXI	CGGCCG	1 cut(s)	75
Eco130I	CCWWGG	1 cut(s)	1064
Eco24I	GRGCYC	2 cut(s)	181, 1260
Eco32I	GATATC	2 cut(s)	468, 1215
Eco47I	GGWCC	3 cut(s)	575, 607, 1711
Eco52I	CGGCCG	1 cut(s)	75
Eco57I	CTGAAG	1 cut(s)	810
Eco88I	CYCGRG	1 cut(s)	182
EcoNI	CCTNNNNNAGG	1 cut(s)	789
EcoRI	GAATTC	1 cut(s)	668
EcoRII	CCWGG	2 cut(s)	577, 663
EcoRV	GATATC	2 cut(s)	468, 1215
EcoT14I	CCWWGG	1 cut(s)	1064
EcoT38I	GRGCYC	2 cut(s)	181, 1260
ErhI	CCWWGG	1 cut(s)	1064
FaeI	CATG	7 cut(s)	169, 338, 504, 884, 997, 1068, 1337
FalI	AAGNNNNNCTT	4 cut(s)	1078, 1110, 1480, 1512
FatI	CATG	7 cut(s)	165, 334, 500, 880, 993, 1064, 1333
Fnu4HI	GCNGC	8 cut(s)	69, 219, 446, 678, 1125, 1200, 1278, 1353
FokI	GGATG	1 cut(s)	1315
FriOI	GRGCYC	2 cut(s)	181, 1260
Fsp4HI	GCNGC	8 cut(s)	69, 219, 446, 678, 1125, 1200, 1278, 1353
FspBI	CTAG	4 cut(s)	282, 557, 1293, 1541
GlaI	GCGC	2 cut(s)	188, 1495
GluI	GCNGC	8 cut(s)	69, 219, 446, 678, 1125, 1200, 1278, 1353
GsaI	CCCAGC	1 cut(s)	1172
GsuI	CTGGAG	4 cut(s)	116, 290, 371, 600
HaeIII	GGCC	4 cut(s)	71, 77, 663, 1031
HhaI	GCGC	2 cut(s)	189, 1496
Hin1II	CATG	7 cut(s)	169, 338, 504, 884, 997, 1068, 1337
Hin6I	GCGC	2 cut(s)	187, 1494
HinP1I	GCGC	2 cut(s)	187, 1494
HincII	GTYRAC	1 cut(s)	1235
HindII	GTYRAC	1 cut(s)	1235
HindIII	AAGCTT	2 cut(s)	683, 1076
HinfI	GANTC	9 cut(s)	12, 56, 80, 116, 224, 265, 1330, 1591, 1718
HphI	GGTGA	1 cut(s)	1021
Hpy166II	GTNNAC	5 cut(s)	454, 722, 1061, 1235, 1523
Hpy188I	TCNGA	8 cut(s)	11, 121, 396, 472, 790, 1101, 1466, 1684
Hpy188III	TCNNGA	7 cut(s)	182, 269, 335, 350, 850, 1181, 1585
Hpy8I	GTNNAC	5 cut(s)	454, 722, 1061, 1235, 1523
Hpy99I	CGWCG	1 cut(s)	133
HpyAV	CCTTC	5 cut(s)	391, 526, 785, 795, 1445
HpyCH4III	ACNGT	7 cut(s)	277, 622, 895, 920, 1384, 1399, 1527
HpyCH4IV	ACGT	1 cut(s)	1051
HpyCH4V	TGCA	6 cut(s)	448, 497, 656, 727, 809, 913
HpyF10VI	GCNNNNNNNGC	3 cut(s)	74, 566, 1130
HpySE526I	ACGT	1 cut(s)	1051
Hsp92II	CATG	7 cut(s)	169, 338, 504, 884, 997, 1068, 1337
HspAI	GCGC	2 cut(s)	187, 1494
KspI	CCGCGG	1 cut(s)	222
Kzo9I	GATC	8 cut(s)	105, 140, 172, 391, 472, 563, 1011, 1225
LguI	GCTCTTC	1 cut(s)	882
LmnI	GCTCC	2 cut(s)	12, 365
Lsp1109I	GCAGC	4 cut(s)	432, 664, 1136, 1364
MaeI	CTAG	4 cut(s)	282, 557, 1293, 1541
MaeII	ACGT	1 cut(s)	1051
MaeIII	GTNAC	6 cut(s)	37, 146, 889, 1357, 1533, 1564
MalI	GATC	8 cut(s)	107, 142, 174, 393, 474, 565, 1013, 1227
MbiI	CCGCTC	1 cut(s)	1280
MboI	GATC	8 cut(s)	105, 140, 172, 391, 472, 563, 1011, 1225
MboII	GAAGA	8 cut(s)	383, 638, 792, 816, 869, 968, 1086, 1496
MfeI	CAATTG	1 cut(s)	1118
MflI	RGATCY	3 cut(s)	140, 472, 563
MhlI	GDGCHC	2 cut(s)	181, 1260
MlsI	TGGCCA	1 cut(s)	1031
MluCI	AATT	5 cut(s)	329, 668, 845, 1118, 1469
MluNI	TGGCCA	1 cut(s)	1031
MlyI	GAGTC	5 cut(s)	6, 89, 125, 218, 259
MmeI	TCCRAC	3 cut(s)	34, 99, 1423
MnlI	CCTC	9 cut(s)	57, 82, 91, 94, 307, 575, 710, 775, 1510
Mox20I	TGGCCA	1 cut(s)	1031
MroXI	GAANNNNTTC	1 cut(s)	784
MscI	TGGCCA	1 cut(s)	1031
MseI	TTAA	6 cut(s)	249, 288, 870, 1074, 1175, 1307
MslI	CAYNNNNRTG	1 cut(s)	1301
Msp20I	TGGCCA	1 cut(s)	1031
MspA1I	CMGCKG	4 cut(s)	221, 677, 1127, 1355
MspCI	CTTAAG	1 cut(s)	1073
MspR9I	CCNGG	2 cut(s)	579, 665
MunI	CAATTG	1 cut(s)	1118
Mva1269I	GAATGC	1 cut(s)	1133
MvaI	CCWGG	2 cut(s)	579, 665
MvnI	CGCG	4 cut(s)	68, 189, 221, 1494
MwoI	GCNNNNNNNGC	3 cut(s)	74, 566, 1130
NcoI	CCATGG	1 cut(s)	1064
NdeII	GATC	8 cut(s)	105, 140, 172, 391, 472, 563, 1011, 1225
NheI	GCTAGC	1 cut(s)	1292
NlaIII	CATG	7 cut(s)	169, 338, 504, 884, 997, 1068, 1337
NlaIV	GGNNCC	3 cut(s)	8, 1070, 1192
NmeAIII	GCCGAG	4 cut(s)	28, 53, 103, 139
NmuCI	GTSAC	3 cut(s)	37, 889, 1564
NspI	RCATGY	1 cut(s)	504
PaeR7I	CTCGAG	1 cut(s)	182
PagI	TCATGA	1 cut(s)	334
PciI	ACATGT	1 cut(s)	500
PciSI	GCTCTTC	1 cut(s)	882
PcsI	WCGNNNNNNNCGW	4 cut(s)	80, 125, 134, 694
PctI	GAATGC	1 cut(s)	1133
PdmI	GAANNNNTTC	1 cut(s)	784
PfeI	GAWTC	4 cut(s)	56, 1330, 1591, 1718
PflMI	CCANNNNNTGG	1 cut(s)	956
PkrI	GCNGC	8 cut(s)	70, 220, 447, 679, 1126, 1201, 1279, 1354
PleI	GAGTC	5 cut(s)	6, 88, 124, 218, 259
PpsI	GAGTC	5 cut(s)	6, 88, 124, 218, 259
PscI	ACATGT	1 cut(s)	500
PshBI	ATTAAT	1 cut(s)	870
PsiI	TTATAA	1 cut(s)	908
Psp6I	CCWGG	2 cut(s)	577, 663
PspFI	CCCAGC	1 cut(s)	1168
PspGI	CCWGG	2 cut(s)	577, 663
PspN4I	GGNNCC	3 cut(s)	8, 1070, 1192
PspPI	GGNCC	4 cut(s)	575, 607, 661, 1711
PstI	CTGCAG	1 cut(s)	729
PstNI	CAGNNNCTG	2 cut(s)	566, 707
PsuI	RGATCY	3 cut(s)	140, 472, 563
PvuII	CAGCTG	3 cut(s)	677, 1127, 1355
RsaI	GTAC	1 cut(s)	1062
RsaNI	GTAC	1 cut(s)	1061
RseI	CAYNNNNRTG	1 cut(s)	1301
SacII	CCGCGG	1 cut(s)	222
SapI	GCTCTTC	1 cut(s)	882
SaqAI	TTAA	6 cut(s)	249, 288, 870, 1074, 1175, 1307
SatI	GCNGC	8 cut(s)	69, 219, 446, 678, 1125, 1200, 1278, 1353
Sau3AI	GATC	8 cut(s)	105, 140, 172, 391, 472, 563, 1011, 1225
Sau96I	GGNCC	4 cut(s)	575, 607, 661, 1711
SchI	GAGTC	5 cut(s)	6, 89, 125, 218, 259
ScrFI	CCNGG	2 cut(s)	579, 665
SduI	GDGCHC	2 cut(s)	181, 1260
SfcI	CTRYAG	2 cut(s)	725, 1383
Sfr274I	CTCGAG	1 cut(s)	182
Sfr303I	CCGCGG	1 cut(s)	222
SgrBI	CCGCGG	1 cut(s)	222
SinI	GGWCC	3 cut(s)	575, 607, 1711
SlaI	CTCGAG	1 cut(s)	182
SmiMI	CAYNNNNRTG	1 cut(s)	1301
SmlI	CTYRAG	5 cut(s)	182, 425, 457, 586, 1073
SmoI	CTYRAG	5 cut(s)	182, 425, 457, 586, 1073
Sse9I	AATT	5 cut(s)	329, 668, 845, 1118, 1469
SsiI	CCGC	6 cut(s)	68, 219, 221, 1199, 1278, 1624
SspI	AATATT	1 cut(s)	1044
SspMI	CTAG	4 cut(s)	282, 557, 1293, 1541
StyD4I	CCNGG	2 cut(s)	577, 663
StyI	CCWWGG	1 cut(s)	1064
TaaI	ACNGT	7 cut(s)	277, 622, 895, 920, 1384, 1399, 1527
TaiI	ACGT	1 cut(s)	1054
TaqI	TCGA	5 cut(s)	54, 83, 183, 697, 827
TasI	AATT	5 cut(s)	329, 668, 845, 1118, 1469
TauI	GCSGC	4 cut(s)	71, 221, 1202, 1280
TfiI	GAWTC	4 cut(s)	56, 1330, 1591, 1718
Tru1I	TTAA	6 cut(s)	249, 288, 870, 1074, 1175, 1307
Tru9I	TTAA	6 cut(s)	249, 288, 870, 1074, 1175, 1307
TscAI	CASTG	4 cut(s)	604, 627, 708, 840
TseFI	GTSAC	3 cut(s)	37, 889, 1564
TseI	GCWGC	4 cut(s)	445, 677, 1124, 1352
Tsp45I	GTSAC	3 cut(s)	37, 889, 1564
TspDTI	ATGAA	7 cut(s)	267, 323, 869, 1122, 1307, 1496, 1595
TspRI	CASTG	4 cut(s)	604, 627, 708, 840
Van91I	CCANNNNNTGG	1 cut(s)	956
Vha464I	CTTAAG	1 cut(s)	1073
VpaK11BI	GGWCC	3 cut(s)	575, 607, 1711
VspI	ATTAAT	1 cut(s)	870
XagI	CCTNNNNNAGG	1 cut(s)	789
XapI	RAATTY	3 cut(s)	668, 845, 1469
XceI	RCATGY	1 cut(s)	504
XhoI	CTCGAG	1 cut(s)	182
XmnI	GAANNNNTTC	1 cut(s)	784
XspI	CTAG	4 cut(s)	282, 557, 1293, 1541

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.