Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0006808

Physical Location & Seq

Genomic Coordinates Forward (+)

6303538 .. 6307330

Gene Structure 3793 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0078200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1821 bp

ATGGCTCCTCCCAAAATCTTACTCTGCGGCGATGTCTCCGGCGACCTCAAGCAGCTATTCAAACGAGTCGTTTCGGTCAACAAATCGGCCGGTCCGTTCGACGCGTTGTTCTGCGTCGGCCAGTTCTTCCCCGACTCGGCGGACCAGCTCGAGGAGTTCACCGGTTACATCGAAGGCCGGGCCGGGATTCCTCTCCCGACCTACTTCATCGGCGACTATGGCGTCGGTGCCACTAAGTTTCTCTTGGCCGCAACCAAGGACTCCGGGAACCAAGGCTTCAAAATGGACGGGTTGAAGGTTTGCAACAATCTCTACTGGCTGAAAGGCAGTGGCAAATTCACCTTCCACGGGTTATCGGTGGTGTATTTCTCCGGTCTGCAATCTTCTGATAGACAACAGTTTGGGACTTACAGTCAGGATGATGTTGATGCACTGCGGGCAATTGCTGAGGATCCTGGGATTGTTGACTTGTTCCTAACTAACAAATGGCCAAGGGGGGTTACAAATAAAGCAGCTACATCTGATGTTCCTCCCGGAGCCTCTGAGCCTTTTGGCACTGACTCTACTGTGGCAGAGTTAGTAGCTGAGATCAAACCACGGTATCATATTGCAGGCACCAAAGGCATTTTCTATGCACGTGAGCCTTACTCCAATGTCGATGCTGTGCATATCACCCGCTTCATAGGTCTTGCTCCAGTTGGAAACAAAGACAAGCAGAAATTTCTTCATGCGCTTTCTCCTACTCCAGCATCTACTATGTCTGCTCTTGAAATTAAGACAAAATCGCCAAATACTACCTTGTCTCCATACATGTATATCAAGGGAACAGCTAATGCAAAAGAAGGTGCAAAGAGGTCTAGTGATAGTGTTTCTGATTCTGATTCACAGTACTGGAGATATGATGTCTCCCAAAAAAGGCAGAAACATGGAGCTGGAGATGGTAATAGGCTGTGCTTTAAGTTTGTATCCTCCGGTTCTTGTCCACGAGGGGAAACTTGCAACTTTCAACATGACATGGATGCAAGAGAACAATCTTTGAGAGGTGTTTGCTTCGATTTTATGAACAAAGGAAAGTGTGAAAGGGGTACTGATTGCAAATTTAAGCACAGCTTACAGGATGAAGGTGAAAGCAATTCTCACAAGAGACGCACTGGAAATGCTACCAGGTCGACAGAGTGCTGGTTTTGTTTGTCAAGCTCCAAAATAGAGTCTCATCTATTTATCAGCTTAGGGGAGCATTACTACTGTGCACTTGCTAAAGGCCCACTTGTTGAAGACCACGTATTGCTAATCCCTATTGGGCATTCACCCAATACCCTTTCTCTACCCTCTGAATGCGAGATTGAGCTTGGTAAATTCCAGGATGGTCTTAAAAAATTTTATAAGAAACAAGACAAGGAAGTAGTTTTCTTTGAGTGGGCTTCAAAACATTCAACTCATGCCAATCTTCAGGTCGTTCCTATTCCATCAGCCAAAGCAGCTAGTGTTCAAAACTTATTTCACTTAGCTGCTGACAGGTTCGAATTCAAATTTACGACCACGAAATTCAGTAACAGTTCTGATGGGAGAAAATCGTTGAGGACCCAGTTTGATAGAAATTTTAGCTTCTTCTATGCTGAACTCCCTGATGGTACAGTCCTATCACATTTAATTGAGGAGAGCGAGAAATTTCTACCCCAATTTGGACGTGAGGTTATGGCAGGTTTATTGAACAAGGCTGACAGGGCTGATTGGAGGAGGTGTACAGATAGCAAAGAAGAGGAAACGAAGATGGTAGAAAAATTCAAGAGTAGATTCAAAGAATTTGATCCAAATAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltr_RsmB-F

Protein Analysis

606

Amino Acids

67.53

Weight (kDa)

8.23

Isoelectric Point (pI)

47.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-CCCH_DUS3L	PF25585	315 - 341	2.2e-06	DUS3L CCCH zinc finger domain
CwfJ_C_1	PF04677	383 - 500	2e-36	Protein similar to CwfJ C-terminal
CwfJ_C_2	PF04676	517 - 603	1.8e-20	Protein similar to CwfJ C-terminus 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006808)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G66180 AT5G66180 AT5G66180
fragaria_vesca	FvH4_1g11660 FvH4_1g11660 FvH4_1g11660 FvH4_1g11660 FvH4_1g11660 FvH4_1g11660 FvH4_1g11660
malus_domestica	MD02G1129700.v1.1 MD15G1244000.v1.1
prunus_persica	Prupe.7G169900_v2.0.a1
pyrus_communis	pycom02g10170 pycom15g21490
rosa_chinensis	RchiOBHm_Chr2g0099251
rosa_laevigata	RLG00000016865
rosa_multiflora	Rmu_sc0002025.1_g000004 Rmu_sc0036312.1_g000002
rosa_roxburghii	Rroxscaffold_2G00143280
rosa_rugosa	Rorug02G0078200
rosa_samantha	Rh2AG127400 Rh2BG130400 Rh2CG131600 Rh2DG132000
rosa_wichuraiana	Rw2G009830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1383
AasI	GACNNNNNNGTC	1 cut(s)	221
Acc36I	ACCTGC	1 cut(s)	1691
AccB1I	GGYRCC	2 cut(s)	227, 614
AccI	GTMKAC	1 cut(s)	1169
AccII	CGCG	1 cut(s)	104
AciI	CCGC	5 cut(s)	27, 140, 249, 436, 676
AclWI	GGATC	3 cut(s)	446, 459, 1802
AcoI	YGGCCR	4 cut(s)	87, 118, 246, 488
AcuI	CTGAAG	1 cut(s)	1433
AcvI	CACGTG	1 cut(s)	638
AcyI	GRCGYC	1 cut(s)	222
AfaI	GTAC	4 cut(s)	890, 1087, 1633, 1744
AfiI	CCNNNNNNNGG	5 cut(s)	136, 151, 348, 915, 1682
AflIII	ACRYGT	2 cut(s)	102, 810
AgeI	ACCGGT	1 cut(s)	161
AhdI	GACNNNNNGTC	1 cut(s)	411
AjiI	CACGTC	1 cut(s)	1688
AjnI	CCWGG	3 cut(s)	454, 1163, 1359
AjuI	GAANNNNNNNTTGG	2 cut(s)	611, 643
Alw21I	GWGCWC	1 cut(s)	1252
Alw26I	GTCTC	5 cut(s)	40, 807, 910, 1138, 1215
Alw44I	GTGCAC	1 cut(s)	1248
AlwI	GGATC	3 cut(s)	446, 459, 1802
Ama87I	CYCGRG	1 cut(s)	149
AoxI	GGCC	7 cut(s)	87, 118, 175, 180, 246, 488, 1261
ApaLI	GTGCAC	1 cut(s)	1248
ApeKI	GCWGC	4 cut(s)	52, 512, 1478, 1508
AsiGI	ACCGGT	1 cut(s)	161
AspLEI	GCGC	1 cut(s)	733
AspS9I	GGNCC	5 cut(s)	92, 142, 180, 1262, 1581
AsuC2I	CCSGG	4 cut(s)	179, 184, 265, 534
AsuHPI	GGTGA	5 cut(s)	151, 331, 664, 1136, 1299
AsuII	TTCGAA	1 cut(s)	1521
AvaI	CYCGRG	1 cut(s)	149
AvaII	GGWCC	3 cut(s)	92, 142, 1581
BaeGI	GKGCMC	1 cut(s)	1252
BaeI	ACNNNNGTAYC	2 cut(s)	584, 617
BalI	TGGCCA	1 cut(s)	490
BamHI	GGATCC	1 cut(s)	451
BanI	GGYRCC	2 cut(s)	227, 614
BauI	CACGAG	1 cut(s)	984
BbrPI	CACGTG	1 cut(s)	638
BbsI	GAAGAC	1 cut(s)	1281
Bbv12I	GWGCWC	1 cut(s)	1252
BbvCI	CCTCAGC	1 cut(s)	447
BbvI	GCAGC	4 cut(s)	64, 524, 1490, 1495
BccI	CCATC	6 cut(s)	932, 1358, 1474, 1556, 1622, 1765
BciT130I	CCWGG	3 cut(s)	456, 1165, 1361
BciVI	GTATCC	1 cut(s)	976
BcnI	CCSGG	4 cut(s)	179, 184, 265, 534
BcoDI	GTCTC	5 cut(s)	40, 807, 910, 1138, 1215
BfaI	CTAG	2 cut(s)	858, 1482
BfuAI	ACCTGC	1 cut(s)	1691
BfuI	GTATCC	1 cut(s)	976
BisI	GCNGC	6 cut(s)	28, 53, 249, 513, 1479, 1509
BlsI	GCNGC	6 cut(s)	29, 54, 250, 514, 1480, 1510
BmcAI	AGTACT	1 cut(s)	890
Bme1390I	CCNGG	7 cut(s)	179, 184, 265, 456, 534, 1165, 1361
Bme18I	GGWCC	3 cut(s)	92, 142, 1581
BmeRI	GACNNNNNGTC	1 cut(s)	411
BmeT110I	CYCGRG	1 cut(s)	149
BmgBI	CACGTC	1 cut(s)	1688
BmgT120I	GGNCC	5 cut(s)	92, 142, 180, 1262, 1581
BmiI	GGNNCC	7 cut(s)	6, 229, 269, 453, 538, 616, 1583
BmrFI	CCNGG	7 cut(s)	179, 184, 265, 456, 534, 1165, 1361
BmrI	ACTGGG	1 cut(s)	1579
BmsI	GCATC	4 cut(s)	418, 649, 758, 1009
BmuI	ACTGGG	1 cut(s)	1579
BpiI	GAAGAC	1 cut(s)	1281
BplI	GAGNNNNNCTC	2 cut(s)	632, 664
BpmI	CTGGAG	4 cut(s)	678, 729, 913, 954
Bpu10I	CCTNAGC	2 cut(s)	447, 1228
Bpu14I	TTCGAA	1 cut(s)	1521
BpuEI	CTTGAG	1 cut(s)	32
BpuMI	CCSGG	4 cut(s)	179, 184, 265, 534
BsaAI	YACGTR	2 cut(s)	638, 1282
BsaHI	GRCGYC	1 cut(s)	222
BsaJI	CCNNGG	6 cut(s)	255, 271, 346, 455, 491, 596
BsaWI	WCCGGW	3 cut(s)	161, 371, 971
BsaXI	ACNNNNNCTCC	4 cut(s)	787, 817, 1726, 1756
Bsc4I	CCNNNNNNNGG	5 cut(s)	136, 151, 348, 915, 1682
Bse118I	RCCGGY	2 cut(s)	89, 161
Bse1I	ACTGG	6 cut(s)	121, 320, 695, 896, 1156, 1585
BseBI	CCWGG	3 cut(s)	456, 1165, 1361
BseDI	CCNNGG	6 cut(s)	255, 271, 346, 455, 491, 596
BseGI	GGATG	4 cut(s)	424, 1024, 1123, 1369
BseLI	CCNNNNNNNGG	5 cut(s)	136, 151, 348, 915, 1682
BseMII	CTCAG	3 cut(s)	438, 534, 576
BseNI	ACTGG	6 cut(s)	121, 320, 695, 896, 1156, 1585
BseRI	GAGGAG	3 cut(s)	167, 1670, 1750
BseSI	GKGCMC	1 cut(s)	1252
BseX3I	CGGCCG	1 cut(s)	87
BseXI	GCAGC	4 cut(s)	64, 524, 1490, 1495
Bsh1236I	CGCG	1 cut(s)	104
Bsh1285I	CGRYCG	1 cut(s)	90
BshFI	GGCC	7 cut(s)	89, 120, 177, 182, 248, 490, 1263
BshNI	GGYRCC	2 cut(s)	227, 614
BshTI	ACCGGT	1 cut(s)	161
BsiEI	CGRYCG	1 cut(s)	90
BsiHKAI	GWGCWC	1 cut(s)	1252
BsiHKCI	CYCGRG	1 cut(s)	149
BsiSI	CCGG	9 cut(s)	39, 90, 162, 178, 183, 264, 372, 534, 972
BslFI	GGGAC	1 cut(s)	418
BslI	CCNNNNNNNGG	5 cut(s)	136, 151, 348, 915, 1682
BsmAI	GTCTC	5 cut(s)	40, 807, 910, 1138, 1215
BsmBI	CGTCTC	1 cut(s)	1138
BsmFI	GGGAC	1 cut(s)	418
BsmI	GAATGC	2 cut(s)	1303, 1340
BsnI	GGCC	7 cut(s)	89, 120, 177, 182, 248, 490, 1263
BsoBI	CYCGRG	1 cut(s)	149
Bsp119I	TTCGAA	1 cut(s)	1521
Bsp1286I	GDGCHC	1 cut(s)	1252
Bsp1407I	TGTACA	1 cut(s)	1742
Bsp143I	GATC	3 cut(s)	451, 588, 1807
BspACI	CCGC	5 cut(s)	27, 140, 249, 436, 676
BspANI	GGCC	7 cut(s)	89, 120, 177, 182, 248, 490, 1263
BspCNI	CTCAG	3 cut(s)	439, 535, 577
BspFNI	CGCG	1 cut(s)	104
BspLI	GGNNCC	7 cut(s)	6, 229, 269, 453, 538, 616, 1583
BspMI	ACCTGC	1 cut(s)	1691
BspPI	GGATC	3 cut(s)	446, 459, 1802
BspT104I	TTCGAA	1 cut(s)	1521
BspT107I	GGYRCC	2 cut(s)	227, 614
BsrFI	RCCGGY	2 cut(s)	89, 161
BsrGI	TGTACA	1 cut(s)	1742
BsrI	ACTGG	6 cut(s)	121, 320, 695, 896, 1156, 1585
BssAI	RCCGGY	2 cut(s)	89, 161
BssECI	CCNNGG	6 cut(s)	255, 271, 346, 455, 491, 596
BssMI	GATC	3 cut(s)	451, 588, 1807
BssNI	GRCGYC	1 cut(s)	222
BssSI	CACGAG	1 cut(s)	984
BssT1I	CCWWGG	3 cut(s)	255, 271, 491
Bst2BI	CACGAG	1 cut(s)	984
Bst2UI	CCWGG	3 cut(s)	456, 1165, 1361
Bst4CI	ACNGT	8 cut(s)	399, 413, 568, 600, 888, 1247, 1556, 1636
Bst6I	CTCTTC	1 cut(s)	1752
BstACI	GRCGYC	1 cut(s)	222
BstAUI	TGTACA	1 cut(s)	1742
BstBAI	YACGTR	2 cut(s)	638, 1282
BstBI	TTCGAA	1 cut(s)	1521
BstC8I	GCNNGC	2 cut(s)	438, 613
BstDEI	CTNAG	6 cut(s)	234, 447, 543, 585, 1228, 1504
BstDSI	CCRYGG	2 cut(s)	346, 596
BstF5I	GGATG	4 cut(s)	424, 1024, 1123, 1369
BstFNI	CGCG	1 cut(s)	104
BstHHI	GCGC	1 cut(s)	733
BstKTI	GATC	3 cut(s)	454, 591, 1810
BstMAI	GTCTC	5 cut(s)	40, 807, 910, 1138, 1215
BstMBI	GATC	3 cut(s)	451, 588, 1807
BstMCI	CGRYCG	1 cut(s)	90
BstMWI	GCNNNNNNNGC	5 cut(s)	219, 437, 621, 1478, 1724
BstNI	CCWGG	3 cut(s)	456, 1165, 1361
BstNSI	RCATGY	1 cut(s)	814
BstSCI	CCNGG	7 cut(s)	177, 182, 263, 454, 532, 1163, 1359
BstSLI	GKGCMC	1 cut(s)	1252
BstUI	CGCG	1 cut(s)	104
BstV1I	GCAGC	4 cut(s)	64, 524, 1490, 1495
BstV2I	GAAGAC	1 cut(s)	1281
BstX2I	RGATCY	1 cut(s)	451
BstYI	RGATCY	1 cut(s)	451
BstZI	CGGCCG	1 cut(s)	87
BsuI	GTATCC	1 cut(s)	976
BsuRI	GGCC	7 cut(s)	89, 120, 177, 182, 248, 490, 1263
BtgI	CCRYGG	2 cut(s)	346, 596
BtgZI	GCGATG	1 cut(s)	45
BtrI	CACGTC	1 cut(s)	1688
BtsCI	GGATG	4 cut(s)	424, 1024, 1123, 1369
BtsI	GCAGTG	2 cut(s)	334, 431
BtsIMutI	CAGTG	4 cut(s)	334, 431, 555, 1149
BveI	ACCTGC	1 cut(s)	1691
Cac8I	GCNNGC	2 cut(s)	438, 613
CfoI	GCGC	1 cut(s)	733
Cfr10I	RCCGGY	2 cut(s)	89, 161
Cfr13I	GGNCC	5 cut(s)	92, 142, 180, 1262, 1581
CpoI	CGGWCCG	1 cut(s)	92
CseI	GACGC	4 cut(s)	103, 110, 211, 1155
CsiI	ACCWGGT	1 cut(s)	1163
Csp6I	GTAC	4 cut(s)	889, 1086, 1632, 1743
CspAI	ACCGGT	1 cut(s)	161
CspI	CGGWCCG	1 cut(s)	92
CviAII	CATG	6 cut(s)	728, 811, 926, 1010, 1015, 1439
CviQI	GTAC	4 cut(s)	889, 1086, 1632, 1743
DdeI	CTNAG	6 cut(s)	234, 447, 543, 585, 1228, 1504
DpnI	GATC	3 cut(s)	453, 590, 1809
DpnII	GATC	3 cut(s)	451, 588, 1807
DrdI	GACNNNNNNGTC	1 cut(s)	221
DriI	GACNNNNNGTC	1 cut(s)	411
DseDI	GACNNNNNNGTC	1 cut(s)	221
EaeI	YGGCCR	4 cut(s)	87, 118, 246, 488
EagI	CGGCCG	1 cut(s)	87
Eam1104I	CTCTTC	1 cut(s)	1752
Eam1105I	GACNNNNNGTC	1 cut(s)	411
EarI	CTCTTC	1 cut(s)	1752
EciI	GGCGGA	1 cut(s)	155
EclXI	CGGCCG	1 cut(s)	87
Eco130I	CCWWGG	3 cut(s)	255, 271, 491
Eco47I	GGWCC	3 cut(s)	92, 142, 1581
Eco52I	CGGCCG	1 cut(s)	87
Eco57I	CTGAAG	1 cut(s)	1433
Eco72I	CACGTG	1 cut(s)	638
Eco88I	CYCGRG	1 cut(s)	149
EcoO109I	RGGNCCY	1 cut(s)	1581
EcoRI	GAATTC	1 cut(s)	1523
EcoRII	CCWGG	3 cut(s)	454, 1163, 1359
EcoT14I	CCWWGG	3 cut(s)	255, 271, 491
ErhI	CCWWGG	3 cut(s)	255, 271, 491
Esp3I	CGTCTC	1 cut(s)	1138
FaeI	CATG	6 cut(s)	731, 814, 929, 1013, 1018, 1442
FalI	AAGNNNNNCTT	6 cut(s)	227, 259, 1094, 1126, 1251, 1283
FaqI	GGGAC	1 cut(s)	418
FatI	CATG	6 cut(s)	727, 810, 925, 1009, 1014, 1438
FauI	CCCGC	2 cut(s)	429, 683
FblI	GTMKAC	1 cut(s)	1169
Fnu4HI	GCNGC	6 cut(s)	28, 53, 249, 513, 1479, 1509
FokI	GGATG	4 cut(s)	431, 1031, 1130, 1376
Fsp4HI	GCNGC	6 cut(s)	28, 53, 249, 513, 1479, 1509
FspBI	CTAG	2 cut(s)	858, 1482
GlaI	GCGC	1 cut(s)	732
GluI	GCNGC	6 cut(s)	28, 53, 249, 513, 1479, 1509
GsuI	CTGGAG	4 cut(s)	678, 729, 913, 954
HaeIII	GGCC	7 cut(s)	89, 120, 177, 182, 248, 490, 1263
HapII	CCGG	9 cut(s)	39, 90, 162, 178, 183, 264, 372, 534, 972
HgaI	GACGC	4 cut(s)	103, 110, 211, 1155
HhaI	GCGC	1 cut(s)	733
Hin1I	GRCGYC	1 cut(s)	222
Hin1II	CATG	6 cut(s)	731, 814, 929, 1013, 1018, 1442
Hin6I	GCGC	1 cut(s)	731
HinP1I	GCGC	1 cut(s)	731
HincII	GTYRAC	3 cut(s)	79, 466, 1170
HindII	GTYRAC	3 cut(s)	79, 466, 1170
HinfI	GANTC	9 cut(s)	66, 134, 187, 260, 560, 875, 881, 1208, 1794
HpaII	CCGG	9 cut(s)	39, 90, 162, 178, 183, 264, 372, 534, 972
HphI	GGTGA	5 cut(s)	151, 331, 664, 1136, 1299
Hpy166II	GTNNAC	7 cut(s)	79, 159, 466, 983, 1170, 1250, 1743
Hpy188I	TCNGA	7 cut(s)	388, 523, 544, 874, 880, 1333, 1561
Hpy188III	TCNNGA	4 cut(s)	196, 416, 767, 1786
Hpy8I	GTNNAC	7 cut(s)	79, 159, 466, 983, 1170, 1250, 1743
Hpy99I	CGWCG	3 cut(s)	104, 119, 227
HpyAV	CCTTC	5 cut(s)	167, 289, 352, 836, 1115
HpyCH4III	ACNGT	8 cut(s)	399, 413, 568, 600, 888, 1247, 1556, 1636
HpyCH4IV	ACGT	3 cut(s)	637, 1281, 1687
HpyF10VI	GCNNNNNNNGC	5 cut(s)	219, 437, 621, 1478, 1724
HpyF3I	CTNAG	6 cut(s)	234, 447, 543, 585, 1228, 1504
HpySE526I	ACGT	3 cut(s)	637, 1281, 1687
Hsp92I	GRCGYC	1 cut(s)	222
Hsp92II	CATG	6 cut(s)	731, 814, 929, 1013, 1018, 1442
HspAI	GCGC	1 cut(s)	731
Kzo9I	GATC	3 cut(s)	451, 588, 1807
LmnI	GCTCC	6 cut(s)	10, 536, 697, 929, 1202, 1234
Lsp1109I	GCAGC	4 cut(s)	64, 524, 1490, 1495
LweI	GCATC	4 cut(s)	418, 649, 758, 1009
MabI	ACCWGGT	1 cut(s)	1163
MaeI	CTAG	2 cut(s)	858, 1482
MaeII	ACGT	3 cut(s)	637, 1281, 1687
MaeIII	GTNAC	3 cut(s)	164, 499, 1550
MalI	GATC	3 cut(s)	453, 590, 1809
MboI	GATC	3 cut(s)	451, 588, 1807
MboII	GAAGA	8 cut(s)	118, 375, 716, 1286, 1439, 1600, 1769, 1780
MfeI	CAATTG	1 cut(s)	441
MflI	RGATCY	1 cut(s)	451
MhlI	GDGCHC	1 cut(s)	1252
MlsI	TGGCCA	1 cut(s)	490
MluI	ACGCGT	1 cut(s)	102
MluNI	TGGCCA	1 cut(s)	490
MlyI	GAGTC	5 cut(s)	75, 128, 254, 554, 1217
MmeI	TCCRAC	1 cut(s)	679
Mox20I	TGGCCA	1 cut(s)	490
MscI	TGGCCA	1 cut(s)	490
MseI	TTAA	5 cut(s)	774, 957, 1101, 1371, 1649
Msp20I	TGGCCA	1 cut(s)	490
MspI	CCGG	9 cut(s)	39, 90, 162, 178, 183, 264, 372, 534, 972
MspR9I	CCNGG	7 cut(s)	179, 184, 265, 456, 534, 1165, 1361
MunI	CAATTG	1 cut(s)	441
Mva1269I	GAATGC	2 cut(s)	1303, 1340
MvaI	CCWGG	3 cut(s)	456, 1165, 1361
MvnI	CGCG	1 cut(s)	104
MwoI	GCNNNNNNNGC	5 cut(s)	219, 437, 621, 1478, 1724
NciI	CCSGG	4 cut(s)	179, 184, 265, 534
NdeII	GATC	3 cut(s)	451, 588, 1807
NlaIII	CATG	6 cut(s)	731, 814, 929, 1013, 1018, 1442
NlaIV	GGNNCC	7 cut(s)	6, 229, 269, 453, 538, 616, 1583
NmeAIII	GCCGAG	1 cut(s)	116
NspI	RCATGY	1 cut(s)	814
NspV	TTCGAA	1 cut(s)	1521
PaeR7I	CTCGAG	1 cut(s)	149
PciI	ACATGT	1 cut(s)	810
PcsI	WCGNNNNNNNCGW	1 cut(s)	92
PctI	GAATGC	2 cut(s)	1303, 1340
PfeI	GAWTC	4 cut(s)	187, 875, 881, 1794
PfoI	TCCNGGA	3 cut(s)	263, 532, 1359
PinAI	ACCGGT	1 cut(s)	161
PkrI	GCNGC	6 cut(s)	29, 54, 250, 514, 1480, 1510
PleI	GAGTC	5 cut(s)	74, 128, 254, 554, 1216
PmaCI	CACGTG	1 cut(s)	638
PmlI	CACGTG	1 cut(s)	638
PpsI	GAGTC	5 cut(s)	74, 128, 254, 554, 1216
Ppu21I	YACGTR	2 cut(s)	638, 1282
PpuMI	RGGWCCY	1 cut(s)	1581
PscI	ACATGT	1 cut(s)	810
PsiI	TTATAA	1 cut(s)	1383
Psp5II	RGGWCCY	1 cut(s)	1581
Psp6I	CCWGG	3 cut(s)	454, 1163, 1359
PspCI	CACGTG	1 cut(s)	638
PspGI	CCWGG	3 cut(s)	454, 1163, 1359
PspN4I	GGNNCC	7 cut(s)	6, 229, 269, 453, 538, 616, 1583
PspPI	GGNCC	5 cut(s)	92, 142, 180, 1262, 1581
PspPPI	RGGWCCY	1 cut(s)	1581
PspXI	VCTCGAGB	1 cut(s)	149
PsuI	RGATCY	1 cut(s)	451
RsaI	GTAC	4 cut(s)	890, 1087, 1633, 1744
RsaNI	GTAC	4 cut(s)	889, 1086, 1632, 1743
Rsr2I	CGGWCCG	1 cut(s)	92
RsrII	CGGWCCG	1 cut(s)	92
SalI	GTCGAC	1 cut(s)	1168
SaqAI	TTAA	5 cut(s)	774, 957, 1101, 1371, 1649
SatI	GCNGC	6 cut(s)	28, 53, 249, 513, 1479, 1509
Sau3AI	GATC	3 cut(s)	451, 588, 1807
Sau96I	GGNCC	5 cut(s)	92, 142, 180, 1262, 1581
ScaI	AGTACT	1 cut(s)	890
SchI	GAGTC	5 cut(s)	75, 128, 254, 554, 1217
ScrFI	CCNGG	7 cut(s)	179, 184, 265, 456, 534, 1165, 1361
SduI	GDGCHC	1 cut(s)	1252
SexAI	ACCWGGT	1 cut(s)	1163
SfaNI	GCATC	4 cut(s)	418, 649, 758, 1009
Sfr274I	CTCGAG	1 cut(s)	149
SfuI	TTCGAA	1 cut(s)	1521
SinI	GGWCC	3 cut(s)	92, 142, 1581
SlaI	CTCGAG	1 cut(s)	149
SmlI	CTYRAG	2 cut(s)	47, 149
SmoI	CTYRAG	2 cut(s)	47, 149
SsiI	CCGC	5 cut(s)	27, 140, 249, 436, 676
SspMI	CTAG	2 cut(s)	858, 1482
StyD4I	CCNGG	7 cut(s)	177, 182, 263, 454, 532, 1163, 1359
StyI	CCWWGG	3 cut(s)	255, 271, 491
TaaI	ACNGT	8 cut(s)	399, 413, 568, 600, 888, 1247, 1556, 1636
TaiI	ACGT	3 cut(s)	640, 1284, 1690
TaqI	TCGA	7 cut(s)	99, 150, 171, 657, 1053, 1169, 1521
TaqII	GACCGA	1 cut(s)	64
TatI	WGTACW	2 cut(s)	888, 1742
TauI	GCSGC	2 cut(s)	30, 251
TfiI	GAWTC	4 cut(s)	187, 875, 881, 1794
Tru1I	TTAA	5 cut(s)	774, 957, 1101, 1371, 1649
Tru9I	TTAA	5 cut(s)	774, 957, 1101, 1371, 1649
TscAI	CASTG	4 cut(s)	334, 438, 562, 1156
TseI	GCWGC	4 cut(s)	52, 512, 1478, 1508
TspDTI	ATGAA	5 cut(s)	196, 670, 716, 1076, 1134
TspGWI	ACGGA	1 cut(s)	84
TspRI	CASTG	4 cut(s)	334, 438, 562, 1156
VneI	GTGCAC	1 cut(s)	1248
VpaK11BI	GGWCC	3 cut(s)	92, 142, 1581
XceI	RCATGY	1 cut(s)	814
XhoI	CTCGAG	1 cut(s)	149
XmiI	GTMKAC	1 cut(s)	1169
XspI	CTAG	2 cut(s)	858, 1482
ZrmI	AGTACT	1 cut(s)	890

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.