Rorug02G0084300

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0015625
Physical Location & Seq
Reverse (-)
6779518 .. 6782170
2653 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0084300.1

Sequence Viewer

Length: 1515 bp
ATGGAGAAGAAGCTCTCAGATGTAGCCATGGAAGGAAGCGTGAAGAAGCTCAATGATCTGATCCAACAAGACCCACTTGTGTTAGACAGAGCTTTTGTTTCATCCTTGTCTGAAACCCCACTTCATATAGCTTCAATGTTGGGCCATTTGGACTTGGTCAAAGAGCTACTGAGTCGCAACCCCGAGTTCGCCACCGAGTTGGACTCGCGCGGGTCGACGCCGCTCCACCTGGCTGCGGCCAAAGGACACGTGGGGGTCGTGAGGGAGCTGCTCTTGGCGGACTCGGCGGCGTGTTTGGTGAGGAACCAGGATGGGAGGACGGCGCTCCACGTGGCGGCTGTTAAGGGAAGAGTTGAGGTGGTGGGGGAGTTGGTCCGAGCCAGGACTGAGTCGACTCGGGCGTTGACCGATAGAGGGGAGAGTGTGATGCATTTGTGTGTGGGGAGTAATAGGCTGGAGGGTTTAAGGGTTTTGGTGGAGTGTGTTGGAAAAGATGATCAGCTTGTGAATTTGAAGGATGGGAATGGTAACACCATTTTGCATATTGCCGTGGCCAAGAAGCAAGTTGAGATCATTAAGTTTTTGCTGACCAGGACTGCAGTGAACGTGAACGCTTTGGATGTGAATGGCTCAACTGCATTAGACATTCTACTGCAGGGTCCTAGAGATTTGAAGGACATGGAGGTTGAGGATTCTCTTAGAGAGGTTGGGGCACAAAGGGCAAAGGACATGCGTTCAATTGAGCATGAATGGGTTCCGAAAAAAGAACCTCAGATAACAAGACGTGTAGCCTCAGTAGTGTCTTCGAATGGGGAAAGGACGATGACAAGACGTGCAACGTCAGTAGTATCCGCTAGTGGTGAACGCCAGACAACGAGGCGCCTAGGCTCAACGGTATCCTCAAAAAAAGAGAATGAGACTAACAAACCGGGGGTGAATCAGAAGCCTACTGAGTGGCTCGGCAGGAAGAGAGATTCATTGATGGTGGTGGCGTCACTCCTTGCAACTGTAGCCTTCCAAGCTGCAATAACTCCACCTGGAGGTTTTTGGCAGGATGACAGTCAAGTAGACGAAAATGGTAACCCTGTTGATAATCCTCACAGCGCAGGAACATCTATCATGGCCTCTCAAAACAGAAAAGAGTATGGTGTATTCATGATTTTTAACACAATCGCTTTCCTCTCATCTCTGAGCATAATTCTTCTTCTTGTTAGTGGGCTGCCTATAAAAAAGCGGAGGTGGATGTGGATACAAATGATCATAACGTGGATTGCCATCTCTACACTAGGCGCAACTTACTTTCTCTCGCTCCGTCACATGTCCCCTAAGAATGTGGAAAACGTGTTGCGTCAGGTCTCATCGATATCTGTTTTGACATGGTTGTGTTTGATCTTGCTTGTTTTGATAGGGAATGTCATACGTTTGAATTTATGGGTTCTCAGAAAGTATGGTTATATAAAGCCAAAAGACGAAGACCCATCAGCTACAATTGATGAAGAACTTGAAGATGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DNA_pol_A_exo1

Protein Analysis

504

Amino Acids

55.64

Weight (kDa)

8.73

Isoelectric Point (pI)

36.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 8 - 91 4.8e-12 Ankyrin repeats (3 copies)
Ank_4 PF13637 41 - 88 5.3e-07 Ankyrin repeats (many copies)
Ank_2 PF12796 100 - 164 6.5e-07 Ankyrin repeats (3 copies)
Ank_4 PF13637 144 - 196 1.2e-06 Ankyrin repeats (many copies)
Ank_5 PF13857 167 - 216 1.2e-07 Ankyrin repeats (many copies)
Ank_2 PF12796 169 - 216 5.5e-06 Ankyrin repeats (3 copies)
Ank PF00023 175 - 207 9.5e-06 Ankyrin repeat
PGG PF13962 318 - 437 2.5e-28 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 879
AccBSI CCGCTC 1 cut(s) 223
AccI GTMKAC 3 cut(s) 215, 392, 1068
AccII CGCG 2 cut(s) 208, 210
AciI CCGC 8 cut(s) 210, 221, 236, 278, 287, 335, 852, 1234
AclWI GGATC 1 cut(s) 55
AcoI YGGCCR 2 cut(s) 237, 552
AcsI RAATTY 2 cut(s) 508, 1426
AcvI CACGTG 2 cut(s) 250, 331
AcyI GRCGYC 3 cut(s) 218, 880, 992
AfiI CCNNNNNNNGG 4 cut(s) 235, 334, 414, 1040
AflIII ACRYGT 4 cut(s) 247, 784, 1317, 1341
AgsI TTSAA 6 cut(s) 135, 514, 673, 738, 1426, 1505
AjiI CACGTC 2 cut(s) 785, 833
AjnI CCWGG 5 cut(s) 228, 306, 380, 590, 1036
AluBI AGCT 9 cut(s) 13, 49, 92, 131, 166, 268, 502, 1022, 1484
AluI AGCT 9 cut(s) 13, 49, 92, 131, 166, 268, 502, 1022, 1484
Alw26I GTCTC 2 cut(s) 911, 1360
AlwI GGATC 1 cut(s) 55
Ama87I CYCGRG 2 cut(s) 182, 396
AoxI GGCC 4 cut(s) 142, 237, 552, 1122
ApeKI GCWGC 4 cut(s) 233, 268, 1022, 1219
ApoI RAATTY 2 cut(s) 508, 1426
ArsI GACNNNNNNTTYG 2 cut(s) 77, 109
Asp700I GAANNNNTTC 1 cut(s) 753
AspA2I CCTAGG 1 cut(s) 883
AspLEI GCGC 5 cut(s) 210, 325, 882, 1106, 1292
AspS9I GGNCC 3 cut(s) 142, 373, 659
AsuC2I CCSGG 1 cut(s) 930
AsuHPI GGTGA 3 cut(s) 310, 872, 946
AsuII TTCGAA 1 cut(s) 806
AvaI CYCGRG 2 cut(s) 182, 396
AvaII GGWCC 2 cut(s) 373, 659
AvrII CCTAGG 1 cut(s) 883
BaeGI GKGCMC 1 cut(s) 715
BalI TGGCCA 1 cut(s) 554
BanI GGYRCC 1 cut(s) 879
BbrPI CACGTG 2 cut(s) 250, 331
BbsI GAAGAC 2 cut(s) 795, 1479
BbvI GCAGC 4 cut(s) 220, 255, 1009, 1206
BccI CCATC 5 cut(s) 305, 512, 976, 1283, 1486
BceAI ACGGC 2 cut(s) 336, 533
BciT130I CCWGG 5 cut(s) 230, 308, 382, 592, 1038
BciVI GTATCC 3 cut(s) 859, 907, 1242
BclI TGATCA 2 cut(s) 496, 1257
BcnI CCSGG 1 cut(s) 930
BcoDI GTCTC 2 cut(s) 911, 1360
BfaI CTAG 4 cut(s) 663, 855, 884, 1286
BfmI CTRYAG 3 cut(s) 597, 653, 1008
BfoI RGCGCY 2 cut(s) 326, 883
BfuI GTATCC 3 cut(s) 859, 907, 1242
BisI GCNGC 8 cut(s) 221, 234, 237, 269, 288, 336, 1023, 1220
BlnI CCTAGG 1 cut(s) 883
BlsI GCNGC 8 cut(s) 222, 235, 238, 270, 289, 337, 1024, 1221
Bme1390I CCNGG 6 cut(s) 230, 308, 382, 592, 930, 1038
Bme18I GGWCC 2 cut(s) 373, 659
BmeT110I CYCGRG 2 cut(s) 182, 396
BmgBI CACGTC 2 cut(s) 785, 833
BmgT120I GGNCC 3 cut(s) 142, 373, 659
BmiI GGNNCC 4 cut(s) 305, 660, 756, 881
BmrFI CCNGG 6 cut(s) 230, 308, 382, 592, 930, 1038
BmsI GCATC 1 cut(s) 417
BpiI GAAGAC 2 cut(s) 795, 1479
BplI GAGNNNNNCTC 2 cut(s) 188, 220
BpmI CTGGAG 2 cut(s) 476, 1059
Bpu14I TTCGAA 1 cut(s) 806
BpuMI CCSGG 1 cut(s) 930
Bsa29I ATCGAT 1 cut(s) 1361
BsaAI YACGTR 2 cut(s) 250, 331
BsaBI GATNNNNATC 1 cut(s) 1274
BsaHI GRCGYC 3 cut(s) 218, 880, 992
BsaI GGTCTC 1 cut(s) 1360
BsaJI CCNNGG 4 cut(s) 27, 549, 883, 929
Bsc4I CCNNNNNNNGG 4 cut(s) 235, 334, 414, 1040
Bse8I GATNNNNATC 1 cut(s) 1274
BseBI CCWGG 5 cut(s) 230, 308, 382, 592, 1038
BseCI ATCGAT 1 cut(s) 1361
BseDI CCNNGG 4 cut(s) 27, 549, 883, 929
BseGI GGATG 6 cut(s) 101, 316, 523, 625, 1060, 1248
BseJI GATNNNNATC 1 cut(s) 1274
BseLI CCNNNNNNNGG 4 cut(s) 235, 334, 414, 1040
BseMII CTCAG 8 cut(s) 30, 161, 378, 785, 807, 942, 1181, 1453
BseSI GKGCMC 1 cut(s) 715
BseXI GCAGC 4 cut(s) 220, 255, 1009, 1206
Bsh1236I CGCG 2 cut(s) 208, 210
BshFI GGCC 4 cut(s) 144, 239, 554, 1124
BshNI GGYRCC 1 cut(s) 879
BshVI ATCGAT 1 cut(s) 1361
BsiHKCI CYCGRG 2 cut(s) 182, 396
BsiSI CCGG 1 cut(s) 929
BslFI GGGAC 1 cut(s) 1306
BslI CCNNNNNNNGG 4 cut(s) 235, 334, 414, 1040
BsmAI GTCTC 2 cut(s) 911, 1360
BsmFI GGGAC 1 cut(s) 1306
BsnI GGCC 4 cut(s) 144, 239, 554, 1124
Bso31I GGTCTC 1 cut(s) 1360
BsoBI CYCGRG 2 cut(s) 182, 396
Bsp119I TTCGAA 1 cut(s) 806
Bsp1286I GDGCHC 1 cut(s) 715
Bsp143I GATC 6 cut(s) 55, 60, 496, 570, 1257, 1389
Bsp19I CCATGG 1 cut(s) 27
BspACI CCGC 8 cut(s) 210, 221, 236, 278, 287, 335, 852, 1234
BspANI GGCC 4 cut(s) 144, 239, 554, 1124
BspCNI CTCAG 8 cut(s) 29, 162, 379, 784, 806, 943, 1182, 1452
BspDI ATCGAT 1 cut(s) 1361
BspFNI CGCG 2 cut(s) 208, 210
BspHI TCATGA 1 cut(s) 1155
BspLI GGNNCC 4 cut(s) 305, 660, 756, 881
BspMAI CTGCAG 2 cut(s) 601, 657
BspPI GGATC 1 cut(s) 55
BspT104I TTCGAA 1 cut(s) 806
BspT107I GGYRCC 1 cut(s) 879
BspTNI GGTCTC 1 cut(s) 1360
BsrBI CCGCTC 1 cut(s) 223
BssECI CCNNGG 4 cut(s) 27, 549, 883, 929
BssMI GATC 6 cut(s) 55, 60, 496, 570, 1257, 1389
BssNI GRCGYC 3 cut(s) 218, 880, 992
BssT1I CCWWGG 2 cut(s) 27, 883
Bst2UI CCWGG 5 cut(s) 230, 308, 382, 592, 1038
Bst4CI ACNGT 3 cut(s) 895, 1009, 1061
Bst6I CTCTTC 2 cut(s) 343, 962
BstACI GRCGYC 3 cut(s) 218, 880, 992
BstBAI YACGTR 2 cut(s) 250, 331
BstBI TTCGAA 1 cut(s) 806
BstDSI CCRYGG 2 cut(s) 27, 549
BstEII GGTNACC 1 cut(s) 1079
BstF5I GGATG 6 cut(s) 101, 316, 523, 625, 1060, 1248
BstFNI CGCG 2 cut(s) 208, 210
BstH2I RGCGCY 2 cut(s) 326, 883
BstHHI GCGC 5 cut(s) 210, 325, 882, 1106, 1292
BstKTI GATC 6 cut(s) 58, 63, 499, 573, 1260, 1392
BstMAI GTCTC 2 cut(s) 911, 1360
BstMBI GATC 6 cut(s) 55, 60, 496, 570, 1257, 1389
BstMWI GCNNNNNNNGC 4 cut(s) 284, 719, 1010, 1019
BstNI CCWGG 5 cut(s) 230, 308, 382, 592, 1038
BstNSI RCATGY 2 cut(s) 733, 1321
BstPI GGTNACC 1 cut(s) 1079
BstSCI CCNGG 6 cut(s) 228, 306, 380, 590, 928, 1036
BstSFI CTRYAG 3 cut(s) 597, 653, 1008
BstSLI GKGCMC 1 cut(s) 715
BstUI CGCG 2 cut(s) 208, 210
BstV1I GCAGC 4 cut(s) 220, 255, 1009, 1206
BstV2I GAAGAC 2 cut(s) 795, 1479
BstXI CCANNNNNNTGG 1 cut(s) 199
Bsu15I ATCGAT 1 cut(s) 1361
BsuI GTATCC 3 cut(s) 859, 907, 1242
BsuRI GGCC 4 cut(s) 144, 239, 554, 1124
BsuTUI ATCGAT 1 cut(s) 1361
BtgI CCRYGG 2 cut(s) 27, 549
BtrI CACGTC 2 cut(s) 785, 833
BtsCI GGATG 6 cut(s) 101, 316, 523, 625, 1060, 1248
BtsI GCAGTG 1 cut(s) 606
BtsIMutI CAGTG 1 cut(s) 606
CciI TCATGA 1 cut(s) 1155
CfoI GCGC 5 cut(s) 210, 325, 882, 1106, 1292
Cfr13I GGNCC 3 cut(s) 142, 373, 659
ClaI ATCGAT 1 cut(s) 1361
CseI GACGC 3 cut(s) 226, 981, 1337
CviAII CATG 8 cut(s) 28, 679, 730, 746, 1120, 1156, 1318, 1377
DinI GGCGCC 1 cut(s) 881
DpnI GATC 6 cut(s) 57, 62, 498, 572, 1259, 1391
DpnII GATC 6 cut(s) 55, 60, 496, 570, 1257, 1389
EaeI YGGCCR 2 cut(s) 237, 552
Eam1104I CTCTTC 2 cut(s) 343, 962
EarI CTCTTC 2 cut(s) 343, 962
EciI GGCGGA 1 cut(s) 293
Eco130I CCWWGG 2 cut(s) 27, 883
Eco31I GGTCTC 1 cut(s) 1360
Eco32I GATATC 1 cut(s) 1365
Eco47I GGWCC 2 cut(s) 373, 659
Eco72I CACGTG 2 cut(s) 250, 331
Eco88I CYCGRG 2 cut(s) 182, 396
Eco91I GGTNACC 1 cut(s) 1079
EcoO109I RGGNCCY 1 cut(s) 659
EcoO65I GGTNACC 1 cut(s) 1079
EcoRII CCWGG 5 cut(s) 228, 306, 380, 590, 1036
EcoRV GATATC 1 cut(s) 1365
EcoT14I CCWWGG 2 cut(s) 27, 883
EcoT22I ATGCAT 1 cut(s) 432
EgeI GGCGCC 1 cut(s) 881
EheI GGCGCC 1 cut(s) 881
ErhI CCWWGG 2 cut(s) 27, 883
FaeI CATG 8 cut(s) 31, 682, 733, 749, 1123, 1159, 1321, 1380
FalI AAGNNNNNCTT 2 cut(s) 60, 92
FaqI GGGAC 1 cut(s) 1306
FatI CATG 8 cut(s) 27, 678, 729, 745, 1119, 1155, 1317, 1376
FauI CCCGC 1 cut(s) 203
FbaI TGATCA 2 cut(s) 496, 1257
FblI GTMKAC 3 cut(s) 215, 392, 1068
Fnu4HI GCNGC 8 cut(s) 221, 234, 237, 269, 288, 336, 1023, 1220
FokI GGATG 6 cut(s) 88, 323, 530, 632, 1067, 1255
Fsp4HI GCNGC 8 cut(s) 221, 234, 237, 269, 288, 336, 1023, 1220
FspBI CTAG 4 cut(s) 663, 855, 884, 1286
GlaI GCGC 5 cut(s) 209, 324, 881, 1105, 1291
GluI GCNGC 8 cut(s) 221, 234, 237, 269, 288, 336, 1023, 1220
GsuI CTGGAG 2 cut(s) 476, 1059
HaeII RGCGCY 2 cut(s) 326, 883
HaeIII GGCC 4 cut(s) 144, 239, 554, 1124
HapII CCGG 1 cut(s) 929
HgaI GACGC 3 cut(s) 226, 981, 1337
HhaI GCGC 5 cut(s) 210, 325, 882, 1106, 1292
Hin1I GRCGYC 3 cut(s) 218, 880, 992
Hin1II CATG 8 cut(s) 31, 682, 733, 749, 1123, 1159, 1321, 1380
Hin6I GCGC 5 cut(s) 208, 323, 880, 1104, 1290
HinP1I GCGC 5 cut(s) 208, 323, 880, 1104, 1290
HincII GTYRAC 3 cut(s) 216, 393, 405
HindII GTYRAC 3 cut(s) 216, 393, 405
HinfI GANTC 8 cut(s) 172, 203, 281, 389, 394, 692, 937, 974
HpaII CCGG 1 cut(s) 929
HphI GGTGA 3 cut(s) 310, 872, 946
Hpy166II GTNNAC 7 cut(s) 216, 393, 405, 604, 610, 863, 1069
Hpy188I TCNGA 9 cut(s) 19, 60, 112, 377, 759, 774, 942, 1191, 1442
Hpy188III TCNNGA 2 cut(s) 259, 1156
Hpy8I GTNNAC 7 cut(s) 216, 393, 405, 604, 610, 863, 1069
Hpy99I CGWCG 1 cut(s) 220
HpyAV CCTTC 4 cut(s) 26, 508, 667, 1024
HpyCH4III ACNGT 3 cut(s) 895, 1009, 1061
HpyCH4IV ACGT 9 cut(s) 249, 330, 606, 784, 832, 839, 1265, 1341, 1420
HpyCH4V TGCA 8 cut(s) 430, 541, 599, 638, 655, 836, 1004, 1025
HpyF10VI GCNNNNNNNGC 4 cut(s) 284, 719, 1010, 1019
HpySE526I ACGT 9 cut(s) 249, 330, 606, 784, 832, 839, 1265, 1341, 1420
Hsp92I GRCGYC 3 cut(s) 218, 880, 992
Hsp92II CATG 8 cut(s) 31, 682, 733, 749, 1123, 1159, 1321, 1380
HspAI GCGC 5 cut(s) 208, 323, 880, 1104, 1290
KasI GGCGCC 1 cut(s) 879
Ksp22I TGATCA 2 cut(s) 496, 1257
Kzo9I GATC 6 cut(s) 55, 60, 496, 570, 1257, 1389
LmnI GCTCC 4 cut(s) 228, 265, 330, 1314
Lsp1109I GCAGC 4 cut(s) 220, 255, 1009, 1206
LweI GCATC 1 cut(s) 417
MaeI CTAG 4 cut(s) 663, 855, 884, 1286
MaeII ACGT 9 cut(s) 249, 330, 606, 784, 832, 839, 1265, 1341, 1420
MaeIII GTNAC 4 cut(s) 527, 993, 1079, 1313
MalI GATC 6 cut(s) 57, 62, 498, 572, 1259, 1391
MbiI CCGCTC 1 cut(s) 223
MboI GATC 6 cut(s) 55, 60, 496, 570, 1257, 1389
MboII GAAGA 9 cut(s) 19, 55, 360, 795, 979, 1193, 1196, 1484, 1508
MfeI CAATTG 2 cut(s) 738, 1488
MhlI GDGCHC 1 cut(s) 715
MlsI TGGCCA 1 cut(s) 554
MluCI AATT 5 cut(s) 508, 738, 1197, 1426, 1488
MluNI TGGCCA 1 cut(s) 554
Mly113I GGCGCC 1 cut(s) 880
MlyI GAGTC 5 cut(s) 181, 197, 275, 388, 398
MmeI TCCRAC 3 cut(s) 88, 180, 466
Mox20I TGGCCA 1 cut(s) 554
Mph1103I ATGCAT 1 cut(s) 432
MroXI GAANNNNTTC 1 cut(s) 753
MscI TGGCCA 1 cut(s) 554
MseI TTAA 4 cut(s) 342, 464, 576, 1164
MslI CAYNNNNRTG 2 cut(s) 435, 1381
Msp20I TGGCCA 1 cut(s) 554
MspI CCGG 1 cut(s) 929
MspR9I CCNGG 6 cut(s) 230, 308, 382, 592, 930, 1038
MunI CAATTG 2 cut(s) 738, 1488
MvaI CCWGG 5 cut(s) 230, 308, 382, 592, 1038
MvnI CGCG 2 cut(s) 208, 210
MwoI GCNNNNNNNGC 4 cut(s) 284, 719, 1010, 1019
NarI GGCGCC 1 cut(s) 880
NciI CCSGG 1 cut(s) 930
NcoI CCATGG 1 cut(s) 27
NdeII GATC 6 cut(s) 55, 60, 496, 570, 1257, 1389
NlaIII CATG 8 cut(s) 31, 682, 733, 749, 1123, 1159, 1321, 1380
NlaIV GGNNCC 4 cut(s) 305, 660, 756, 881
NmeAIII GCCGAG 2 cut(s) 263, 939
NmuCI GTSAC 2 cut(s) 993, 1313
NsiI ATGCAT 1 cut(s) 432
NspI RCATGY 2 cut(s) 733, 1321
NspV TTCGAA 1 cut(s) 806
PagI TCATGA 1 cut(s) 1155
PciI ACATGT 1 cut(s) 1317
PcsI WCGNNNNNNNCGW 3 cut(s) 212, 255, 398
PdmI GAANNNNTTC 1 cut(s) 753
PfeI GAWTC 3 cut(s) 692, 937, 974
PflFI GACNNNGTC 2 cut(s) 155, 388
PkrI GCNGC 8 cut(s) 222, 235, 238, 270, 289, 337, 1024, 1221
PleI GAGTC 5 cut(s) 180, 197, 275, 388, 397
PluTI GGCGCC 1 cut(s) 883
PmaCI CACGTG 2 cut(s) 250, 331
PmlI CACGTG 2 cut(s) 250, 331
PpsI GAGTC 5 cut(s) 180, 197, 275, 388, 397
Ppu21I YACGTR 2 cut(s) 250, 331
PpuMI RGGWCCY 1 cut(s) 659
PscI ACATGT 1 cut(s) 1317
Psp5II RGGWCCY 1 cut(s) 659
Psp6I CCWGG 5 cut(s) 228, 306, 380, 590, 1036
PspCI CACGTG 2 cut(s) 250, 331
PspEI GGTNACC 1 cut(s) 1079
PspGI CCWGG 5 cut(s) 228, 306, 380, 590, 1036
PspN4I GGNNCC 4 cut(s) 305, 660, 756, 881
PspPI GGNCC 3 cut(s) 142, 373, 659
PspPPI RGGWCCY 1 cut(s) 659
PstI CTGCAG 2 cut(s) 601, 657
PsyI GACNNNGTC 2 cut(s) 155, 388
RseI CAYNNNNRTG 2 cut(s) 435, 1381
SalI GTCGAC 2 cut(s) 214, 391
SaqAI TTAA 4 cut(s) 342, 464, 576, 1164
SatI GCNGC 8 cut(s) 221, 234, 237, 269, 288, 336, 1023, 1220
Sau3AI GATC 6 cut(s) 55, 60, 496, 570, 1257, 1389
Sau96I GGNCC 3 cut(s) 142, 373, 659
SchI GAGTC 5 cut(s) 181, 197, 275, 388, 398
ScrFI CCNGG 6 cut(s) 230, 308, 382, 592, 930, 1038
SduI GDGCHC 1 cut(s) 715
SfaNI GCATC 1 cut(s) 417
SfcI CTRYAG 3 cut(s) 597, 653, 1008
SfoI GGCGCC 1 cut(s) 881
SfuI TTCGAA 1 cut(s) 806
SinI GGWCC 2 cut(s) 373, 659
SmiMI CAYNNNNRTG 2 cut(s) 435, 1381
Sse9I AATT 5 cut(s) 508, 738, 1197, 1426, 1488
SsiI CCGC 8 cut(s) 210, 221, 236, 278, 287, 335, 852, 1234
SspDI GGCGCC 1 cut(s) 879
SspMI CTAG 4 cut(s) 663, 855, 884, 1286
StyD4I CCNGG 6 cut(s) 228, 306, 380, 590, 928, 1036
StyI CCWWGG 2 cut(s) 27, 883
TaaI ACNGT 3 cut(s) 895, 1009, 1061
TaiI ACGT 9 cut(s) 252, 333, 609, 787, 835, 842, 1268, 1344, 1423
TaqI TCGA 4 cut(s) 215, 392, 806, 1361
TaqII GACCGA 1 cut(s) 422
TasI AATT 5 cut(s) 508, 738, 1197, 1426, 1488
TauI GCSGC 4 cut(s) 223, 239, 290, 338
TfiI GAWTC 3 cut(s) 692, 937, 974
Tru1I TTAA 4 cut(s) 342, 464, 576, 1164
Tru9I TTAA 4 cut(s) 342, 464, 576, 1164
TscAI CASTG 1 cut(s) 606
TseFI GTSAC 2 cut(s) 993, 1313
TseI GCWGC 4 cut(s) 233, 268, 1022, 1219
Tsp45I GTSAC 2 cut(s) 993, 1313
TspDTI ATGAA 6 cut(s) 90, 113, 762, 966, 1144, 1509
TspGWI ACGGA 1 cut(s) 1301
TspRI CASTG 1 cut(s) 606
Tth111I GACNNNGTC 2 cut(s) 155, 388
VpaK11BI GGWCC 2 cut(s) 373, 659
XapI RAATTY 2 cut(s) 508, 1426
XceI RCATGY 2 cut(s) 733, 1321
XcmI CCANNNNNNNNNTGG 1 cut(s) 247
XmaJI CCTAGG 1 cut(s) 883
XmiI GTMKAC 3 cut(s) 215, 392, 1068
XmnI GAANNNNTTC 1 cut(s) 753
XspI CTAG 4 cut(s) 663, 855, 884, 1286
Zsp2I ATGCAT 1 cut(s) 432
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.