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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g11671 FvH4_6g07631 FvH4_6g07633 |
| pyrus_communis | pycom12g19220 |
| rosa_laevigata | RLG00000004863 |
| rosa_roxburghii | Rroxscaffold_2G00142700 Rroxscaffold_3G00268420 |
| rosa_rugosa | Rorug02G0084300 |
| rosa_samantha | Rh2AG133300 Rh2BG136900 Rh2CG138400 Rh2DG138800 Rh3BG081600 Rh3CG082000 Rh7AG069500 Rh7DG078700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 173 |
| AclI | AACGTT | 1 cut(s) | 152 |
| AclWI | GGATC | 1 cut(s) | 175 |
| AcuI | CTGAAG | 1 cut(s) | 113 |
| AjnI | CCWGG | 1 cut(s) | 120 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 89, 121 |
| AluBI | AGCT | 1 cut(s) | 278 |
| AluI | AGCT | 1 cut(s) | 278 |
| AlwI | GGATC | 1 cut(s) | 175 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 34 |
| ApeKI | GCWGC | 1 cut(s) | 117 |
| BbvI | GCAGC | 1 cut(s) | 129 |
| BciT130I | CCWGG | 1 cut(s) | 122 |
| BclI | TGATCA | 1 cut(s) | 40 |
| BfaI | CTAG | 2 cut(s) | 84, 146 |
| BfmI | CTRYAG | 1 cut(s) | 201 |
| BisI | GCNGC | 1 cut(s) | 118 |
| BlsI | GCNGC | 1 cut(s) | 119 |
| Bme1390I | CCNGG | 1 cut(s) | 122 |
| BmiI | GGNNCC | 1 cut(s) | 186 |
| BmrFI | CCNGG | 1 cut(s) | 122 |
| BmrI | ACTGGG | 1 cut(s) | 202 |
| BmsI | GCATC | 2 cut(s) | 187, 277 |
| BmuI | ACTGGG | 1 cut(s) | 202 |
| BoxI | GACNNNNGTC | 1 cut(s) | 69 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 212, 242 |
| Bse1I | ACTGG | 1 cut(s) | 197 |
| BseBI | CCWGG | 1 cut(s) | 122 |
| BseGI | GGATG | 2 cut(s) | 202, 292 |
| BseMII | CTCAG | 2 cut(s) | 194, 225 |
| BseNI | ACTGG | 1 cut(s) | 197 |
| BseRI | GAGGAG | 1 cut(s) | 233 |
| BseXI | GCAGC | 1 cut(s) | 129 |
| Bsp143I | GATC | 3 cut(s) | 40, 167, 222 |
| BspCNI | CTCAG | 2 cut(s) | 193, 224 |
| BspLI | GGNNCC | 1 cut(s) | 186 |
| BspPI | GGATC | 1 cut(s) | 175 |
| BspQI | GCTCTTC | 1 cut(s) | 107 |
| BsrI | ACTGG | 1 cut(s) | 197 |
| BssMI | GATC | 3 cut(s) | 40, 167, 222 |
| Bst2UI | CCWGG | 1 cut(s) | 122 |
| Bst6I | CTCTTC | 1 cut(s) | 107 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 34 |
| BstDEI | CTNAG | 2 cut(s) | 180, 211 |
| BstF5I | GGATG | 2 cut(s) | 202, 292 |
| BstKTI | GATC | 3 cut(s) | 43, 170, 225 |
| BstMBI | GATC | 3 cut(s) | 40, 167, 222 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 34 |
| BstNI | CCWGG | 1 cut(s) | 122 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 69 |
| BstSCI | CCNGG | 1 cut(s) | 120 |
| BstSFI | CTRYAG | 1 cut(s) | 201 |
| BstV1I | GCAGC | 1 cut(s) | 129 |
| BtsCI | GGATG | 2 cut(s) | 202, 292 |
| CaiI | CAGNNNCTG | 1 cut(s) | 34 |
| CviJI | RGCY | 5 cut(s) | 80, 120, 134, 142, 278 |
| CviKI_1 | RGCY | 5 cut(s) | 80, 120, 134, 142, 278 |
| DdeI | CTNAG | 2 cut(s) | 180, 211 |
| DpnI | GATC | 3 cut(s) | 42, 169, 224 |
| DpnII | GATC | 3 cut(s) | 40, 167, 222 |
| Eam1104I | CTCTTC | 1 cut(s) | 107 |
| EarI | CTCTTC | 1 cut(s) | 107 |
| Eco57I | CTGAAG | 1 cut(s) | 113 |
| EcoRII | CCWGG | 1 cut(s) | 120 |
| FaiI | YATR | 9 cut(s) | 45, 203, 231, 240, 249, 258, 260, 262, 316 |
| FbaI | TGATCA | 1 cut(s) | 40 |
| FblI | GTMKAC | 1 cut(s) | 173 |
| Fnu4HI | GCNGC | 1 cut(s) | 118 |
| FokI | GGATG | 2 cut(s) | 209, 299 |
| Fsp4HI | GCNGC | 1 cut(s) | 118 |
| FspBI | CTAG | 2 cut(s) | 84, 146 |
| GluI | GCNGC | 1 cut(s) | 118 |
| HincII | GTYRAC | 2 cut(s) | 64, 174 |
| HindII | GTYRAC | 2 cut(s) | 64, 174 |
| Hpy166II | GTNNAC | 3 cut(s) | 64, 174, 306 |
| Hpy188I | TCNGA | 2 cut(s) | 93, 214 |
| Hpy188III | TCNNGA | 1 cut(s) | 182 |
| Hpy8I | GTNNAC | 3 cut(s) | 64, 174, 306 |
| Hpy99I | CGWCG | 1 cut(s) | 175 |
| HpyCH4IV | ACGT | 1 cut(s) | 152 |
| HpyCH4V | TGCA | 1 cut(s) | 233 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 34 |
| HpyF3I | CTNAG | 2 cut(s) | 180, 211 |
| HpySE526I | ACGT | 1 cut(s) | 152 |
| Ksp22I | TGATCA | 1 cut(s) | 40 |
| Kzo9I | GATC | 3 cut(s) | 40, 167, 222 |
| LguI | GCTCTTC | 1 cut(s) | 107 |
| LpnPI | CCDG | 5 cut(s) | 42, 107, 134, 167, 178 |
| Lsp1109I | GCAGC | 1 cut(s) | 129 |
| LweI | GCATC | 2 cut(s) | 187, 277 |
| MaeI | CTAG | 2 cut(s) | 84, 146 |
| MaeII | ACGT | 1 cut(s) | 152 |
| MalI | GATC | 3 cut(s) | 42, 169, 224 |
| MboI | GATC | 3 cut(s) | 40, 167, 222 |
| MboII | GAAGA | 2 cut(s) | 106, 124 |
| MluCI | AATT | 1 cut(s) | 234 |
| MnlI | CCTC | 1 cut(s) | 211 |
| MseI | TTAA | 1 cut(s) | 293 |
| MspR9I | CCNGG | 1 cut(s) | 122 |
| MvaI | CCWGG | 1 cut(s) | 122 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 34 |
| NdeII | GATC | 3 cut(s) | 40, 167, 222 |
| NlaIV | GGNNCC | 1 cut(s) | 186 |
| PciSI | GCTCTTC | 1 cut(s) | 107 |
| PkrI | GCNGC | 1 cut(s) | 119 |
| PshAI | GACNNNNGTC | 1 cut(s) | 69 |
| Psp1406I | AACGTT | 1 cut(s) | 152 |
| Psp6I | CCWGG | 1 cut(s) | 120 |
| PspGI | CCWGG | 1 cut(s) | 120 |
| PspN4I | GGNNCC | 1 cut(s) | 186 |
| PstNI | CAGNNNCTG | 1 cut(s) | 34 |
| SalI | GTCGAC | 1 cut(s) | 172 |
| SapI | GCTCTTC | 1 cut(s) | 107 |
| SaqAI | TTAA | 1 cut(s) | 293 |
| SatI | GCNGC | 1 cut(s) | 118 |
| Sau3AI | GATC | 3 cut(s) | 40, 167, 222 |
| ScrFI | CCNGG | 1 cut(s) | 122 |
| SetI | ASST | 3 cut(s) | 61, 155, 280 |
| SfaNI | GCATC | 2 cut(s) | 187, 277 |
| SfcI | CTRYAG | 1 cut(s) | 201 |
| Sse9I | AATT | 1 cut(s) | 234 |
| SspMI | CTAG | 2 cut(s) | 84, 146 |
| StyD4I | CCNGG | 1 cut(s) | 120 |
| TaiI | ACGT | 1 cut(s) | 155 |
| TaqI | TCGA | 3 cut(s) | 8, 138, 173 |
| TasI | AATT | 1 cut(s) | 234 |
| Tru1I | TTAA | 1 cut(s) | 293 |
| Tru9I | TTAA | 1 cut(s) | 293 |
| TseI | GCWGC | 1 cut(s) | 117 |
| TspDTI | ATGAA | 1 cut(s) | 5 |
| XmiI | GTMKAC | 1 cut(s) | 173 |
| XspI | CTAG | 2 cut(s) | 84, 146 |