Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0011682

Physical Location & Seq

Genomic Coordinates Reverse (-)

13225531 .. 13227905

Gene Structure 2375 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0150100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2067 bp

ATGTCGTTTGTATTTCCAAAACCTCTCACCAAGTCCAGAAATAGCTCTTCATATTCTAGTTATTCTAATTTTGATTTGGACGAAAATCATTACAAATTGATCAGAAACCCTGAATCTGATTATGATGAATTACTCGTTCGTCTTTCACTATATGCCTTCAACCGACTATCCCCCAGTGATCAACGAGAGCAAGTAGCAAAAATCAGTCACACTGTCAACGATAAAGATGTGCAATTCCTCGAGGAAAGCGATGAGGCTATCAGACTGACATCAACATTTGCAGAGCAATTCAAGAAACTAAACTTTGCTGATCAGAAGAAGCTTTTCCTATCCAAAGTTATACAGAAATTCAAGCGTGAAAGGCAGTTCGGGGAGTTGATATCTTCATTCAAGCAACTAGATGCAGATCATCAACAACAACTGATTGACAAAATCGTTCCTATTACATCAGAGAATCTCCGGAATCCTGGGGAAATTGAAGAGGAGTTCAGACTCAGAAGATTCACACAGCTGTCTAGAGATTATACCCACCATGTTTACAAGCGTCTTGTTTCCCGGAAAGATACTAAAATAAGTAAAGAACAAGAAGAGACATCCGACGATGATAATTGTTGGGATTGGAATTCCTGTTTTGGAGAGTTTTTCTCAACTATCTGGTTGCAGGAACAAAGCGCCGGTGCTCAAGACATGCTCAATGAACAACTCTCCGACGGAGACACAGCTGTTGTGGTTGAGAGAAGTGAAGAACAAGAGACCTCCTCCAACAATGAAGATGGTTCGAATTGGAAGTCCTGTTTTGCTGAATTTTTCTTGGGTTTCTCAGTAATTTGGTTCCAGGGACAAAGCGCCGGTGGTCAAGACATGCTCATTGAACAGCTCGTCAAGGGAACTAGAGGTGTTGTGATTGAGAAACGTCTGCCGGAAGAAAGTGAGGGGGATTTCAAACTGAGAAGATTTACAGAGCTATGCAAGAATGTAGTTGACTTCGGGGTCCAAAAGAAATTTCTTAACAATGCTGAATGGAAACTACGAAGATGGAGAAACGATTATAGTTCCAGGTTGATCGGTGAGCCGCAGGATTCTCACAGTGCTGCTGAACTACTCTCTCATCTCTGGACTTTTGGGGTTAGCCTACTATCACCAAAGTATCAACAGCAGAAGATTGATGAAATGTCTACTCAAGTCAAATCCGGTGTTAAAATCAAAATACCCCTTGCAGCAGCAGCAGAGGATCAGACTAGTACTACTGATCATGAGGAAGCTATGAGAATTAGAAGATTGACAGAGCTGTTTAATCAAGTTCCGGTCCCTACCCGAATTGATTTATTCAAGGAGTTGAGGGAAACGTTGTTGAAGGCAAAACGCTACTCTGAGGCTGTTCGTGTCTTCAGGGGACTAAGCTCCAAGTATCAAACGGAGATAATCGAGAACATGTTCTATCGGATAACGGAGTCCTGGTGGGAAAGTGGCGACCCTGCCGAAGTCATAGTTGAGAAATTCTCGAGTGAAAGTGAGGAGAATTTCAGGCTTAGAAGATTTATTAAGATGTGTATTAAACATCTTTCCACTTGGAACTATATTATCTGGCCGAAAGCTTACAGACTGGAACTGCATAGTGCATCAGATCCTTATGACGAGTTCTTGTTTGGTCTAGCAGTTACTTGGTTCAAAGCAAAATGCGCCAATATTCGAAGAAACCCCATTCAACTTATACATTTCGGCAAATATGAATTCCGTGATATAATTGAGAAACTGCCGGAGGAGACTGAGGAGGATTTCAAGCTCAGGAGATTCACAGAGTCGTTTAAGCGACTTGAGTTCACTTCCCAAGAGTGTATCCTTGACTACATTCAAGATGCAATATCTACCGAGCTAGGCTATCCTGAACCGAAGATGGTACCTCATTCCGCGCATATACCGTCTGTAGGAAGGGGTTTGTTTGATCCTGAATGGTTCCACTACAAAATTACAAATCCAAGAAATCAAGTAGCAGCAACTACTCAAGGGCAAGGAGCAGGTGGAGCAACTACTCAAGCAGCAGTAGGGCAGGGAACGAGTCAACAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001882 GO:0001883 GO:0002252 GO:0002376 GO:0003674 GO:0005488 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0005829 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0008150 GO:0009506 GO:0009605 GO:0009607 GO:0009615 GO:0012505 GO:0016020 GO:0017076 GO:0019001 GO:0030054 GO:0031090 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0035639 GO:0036094 GO:0043167 GO:0043168 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051607 GO:0051704 GO:0051707 GO:0055044 GO:0071944 GO:0097159 GO:0097367 GO:0098542 GO:0098588 GO:0098805 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arf

Protein Analysis

688

Amino Acids

80.17

Weight (kDa)

5.67

Isoelectric Point (pI)

53.47

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011682)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49860 AT3G49870 AT3G49870 AT5G67560
fragaria_vesca	FvH4_1g17760
malus_domestica	MD02G1186600.v1.1 MD15G1297800.v1.1
prunus_persica	Prupe.6G220000_v2.0.a1
pyrus_communis	pycom02g15170
rosa_chinensis	RchiOBHm_Chr2g0108091 RchiOBHm_Chr2g0108181
rosa_multiflora	Rmu_sc0001484.1_g000004
rosa_roxburghii	Rroxscaffold_2G00135640
rosa_rugosa	Rorug02G0150100
rosa_samantha	Rh2AG199400 Rh2BG212100 Rh2CG204000 Rh2DG207100
rosa_wichuraiana	Rw2G015820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2006
AasI	GACNNNNNNGTC	1 cut(s)	989
AbsI	CCTCGAGG	1 cut(s)	239
Acc36I	ACCTGC	1 cut(s)	2006
Acc65I	GGTACC	1 cut(s)	1897
AccB1I	GGYRCC	1 cut(s)	1897
AccI	GTMKAC	1 cut(s)	1175
AccII	CGCG	1 cut(s)	1910
AccIII	TCCGGA	1 cut(s)	459
AciI	CCGC	2 cut(s)	1073, 1908
AclI	AACGTT	1 cut(s)	1346
AclWI	GGATC	3 cut(s)	1239, 1619, 1937
AcoI	YGGCCR	1 cut(s)	1586
AcsI	RAATTY	7 cut(s)	347, 622, 803, 1001, 1496, 1519, 1730
AcuI	CTGAAG	1 cut(s)	1372
AfaI	GTAC	2 cut(s)	1243, 1899
AfiI	CCNNNNNNNGG	1 cut(s)	1925
AflIII	ACRYGT	1 cut(s)	1431
AhlI	ACTAGT	1 cut(s)	1238
AjnI	CCWGG	4 cut(s)	466, 834, 1055, 1454
AjuI	GAANNNNNNNTTGG	2 cut(s)	987, 1019
Alw21I	GWGCWC	1 cut(s)	682
Alw26I	GTCTC	4 cut(s)	584, 708, 746, 1757
AlwI	GGATC	3 cut(s)	1239, 1619, 1937
Ama87I	CYCGRG	2 cut(s)	239, 1501
Aor13HI	TCCGGA	1 cut(s)	459
AoxI	GGCC	1 cut(s)	1586
ApeKI	GCWGC	6 cut(s)	1091, 1217, 1220, 1223, 1991, 2036
ApoI	RAATTY	7 cut(s)	347, 622, 803, 1001, 1496, 1519, 1730
ArsI	GACNNNNNNTTYG	2 cut(s)	773, 805
Asp700I	GAANNNNTTC	2 cut(s)	323, 1433
Asp718I	GGTACC	1 cut(s)	1897
AspLEI	GCGC	4 cut(s)	674, 848, 1682, 1912
AspS9I	GGNCC	2 cut(s)	991, 1306
AsuC2I	CCSGG	1 cut(s)	556
AsuHPI	GGTGA	3 cut(s)	19, 1079, 1131
AsuII	TTCGAA	2 cut(s)	779, 1690
AvaI	CYCGRG	2 cut(s)	239, 1501
AvaII	GGWCC	2 cut(s)	991, 1306
BaeI	ACNNNNGTAYC	2 cut(s)	1130, 1163
BanI	GGYRCC	1 cut(s)	1897
BbsI	GAAGAC	1 cut(s)	1378
Bbv12I	GWGCWC	1 cut(s)	682
BbvI	GCAGC	6 cut(s)	1078, 1229, 1232, 1235, 2003, 2048
BccI	CCATC	3 cut(s)	767, 1029, 1888
BciT130I	CCWGG	4 cut(s)	468, 836, 1057, 1456
BciVI	GTATCC	1 cut(s)	1847
BclI	TGATCA	4 cut(s)	99, 178, 310, 1249
BcnI	CCSGG	1 cut(s)	556
BcoDI	GTCTC	4 cut(s)	584, 708, 746, 1757
BcuI	ACTAGT	1 cut(s)	1238
BfaI	CTAG	7 cut(s)	57, 398, 516, 891, 1239, 1652, 1874
BfmI	CTRYAG	1 cut(s)	1923
BfoI	RGCGCY	2 cut(s)	675, 849
BfuAI	ACCTGC	1 cut(s)	2006
BfuI	GTATCC	1 cut(s)	1847
BisI	GCNGC	7 cut(s)	1073, 1092, 1218, 1221, 1224, 1992, 2037
BlsI	GCNGC	7 cut(s)	1074, 1093, 1219, 1222, 1225, 1993, 2038
BmcAI	AGTACT	1 cut(s)	1243
Bme1390I	CCNGG	5 cut(s)	468, 556, 836, 1057, 1456
Bme18I	GGWCC	2 cut(s)	991, 1306
BmeT110I	CYCGRG	2 cut(s)	239, 1501
BmgT120I	GGNCC	2 cut(s)	991, 1306
BmiI	GGNNCC	5 cut(s)	833, 992, 1308, 1899, 1955
BmrFI	CCNGG	5 cut(s)	468, 556, 836, 1057, 1456
BmrI	ACTGGG	1 cut(s)	168
BmsI	GCATC	3 cut(s)	391, 1628, 1846
BmuI	ACTGGG	1 cut(s)	168
BpiI	GAAGAC	1 cut(s)	1378
BplI	GAGNNNNNCTC	6 cut(s)	629, 661, 743, 775, 1484, 1516
Bpu10I	CCTNAGC	1 cut(s)	1784
Bpu14I	TTCGAA	2 cut(s)	779, 1690
BpuEI	CTTGAG	5 cut(s)	666, 1164, 1835, 1986, 2016
BpuMI	CCSGG	1 cut(s)	556
BsaBI	GATNNNNATC	1 cut(s)	405
BsaI	GGTCTC	1 cut(s)	746
BsaJI	CCNNGG	2 cut(s)	467, 835
BsaWI	WCCGGW	3 cut(s)	459, 1190, 1303
BsaXI	ACNNNNNCTCC	2 cut(s)	1442, 1472
Bsc4I	CCNNNNNNNGG	1 cut(s)	1925
Bse118I	RCCGGY	2 cut(s)	674, 848
Bse1I	ACTGG	2 cut(s)	174, 1608
Bse8I	GATNNNNATC	1 cut(s)	405
BseAI	TCCGGA	1 cut(s)	459
BseBI	CCWGG	4 cut(s)	468, 836, 1057, 1456
BseDI	CCNNGG	2 cut(s)	467, 835
BseGI	GGATG	1 cut(s)	593
BseJI	GATNNNNATC	1 cut(s)	405
BseLI	CCNNNNNNNGG	1 cut(s)	1925
BseMII	CTCAG	6 cut(s)	508, 834, 938, 1362, 1758, 1798
BseNI	ACTGG	2 cut(s)	174, 1608
BseRI	GAGGAG	5 cut(s)	497, 748, 1529, 1775, 1784
BseXI	GCAGC	6 cut(s)	1078, 1229, 1232, 1235, 2003, 2048
Bsh1236I	CGCG	1 cut(s)	1910
BshFI	GGCC	1 cut(s)	1588
BshNI	GGYRCC	1 cut(s)	1897
BsiHKAI	GWGCWC	1 cut(s)	682
BsiHKCI	CYCGRG	2 cut(s)	239, 1501
BsiSI	CCGG	8 cut(s)	460, 556, 675, 849, 920, 1191, 1304, 1757
BslFI	GGGAC	3 cut(s)	852, 1292, 1407
BslI	CCNNNNNNNGG	1 cut(s)	1925
BsmAI	GTCTC	4 cut(s)	584, 708, 746, 1757
BsmFI	GGGAC	3 cut(s)	852, 1292, 1407
BsnI	GGCC	1 cut(s)	1588
Bso31I	GGTCTC	1 cut(s)	746
BsoBI	CYCGRG	2 cut(s)	239, 1501
Bsp119I	TTCGAA	2 cut(s)	779, 1690
Bsp1286I	GDGCHC	1 cut(s)	682
Bsp13I	TCCGGA	1 cut(s)	459
Bsp143I	GATC	9 cut(s)	99, 178, 310, 406, 1062, 1231, 1249, 1624, 1942
BspACI	CCGC	2 cut(s)	1073, 1908
BspANI	GGCC	1 cut(s)	1588
BspCNI	CTCAG	6 cut(s)	507, 833, 939, 1363, 1759, 1797
BspEI	TCCGGA	1 cut(s)	459
BspFNI	CGCG	1 cut(s)	1910
BspHI	TCATGA	1 cut(s)	1252
BspLI	GGNNCC	5 cut(s)	833, 992, 1308, 1899, 1955
BspMI	ACCTGC	1 cut(s)	2006
BspPI	GGATC	3 cut(s)	1239, 1619, 1937
BspQI	GCTCTTC	1 cut(s)	52
BspT104I	TTCGAA	2 cut(s)	779, 1690
BspT107I	GGYRCC	1 cut(s)	1897
BspTNI	GGTCTC	1 cut(s)	746
BsrFI	RCCGGY	2 cut(s)	674, 848
BsrI	ACTGG	2 cut(s)	174, 1608
BssAI	RCCGGY	2 cut(s)	674, 848
BssECI	CCNNGG	2 cut(s)	467, 835
BssMI	GATC	9 cut(s)	99, 178, 310, 406, 1062, 1231, 1249, 1624, 1942
Bst2UI	CCWGG	4 cut(s)	468, 836, 1057, 1456
Bst4CI	ACNGT	3 cut(s)	214, 1088, 1920
Bst6I	CTCTTC	3 cut(s)	52, 474, 582
BstBI	TTCGAA	2 cut(s)	779, 1690
BstDEI	CTNAG	8 cut(s)	494, 820, 947, 1371, 1397, 1529, 1767, 1784
BstF5I	GGATG	1 cut(s)	593
BstFNI	CGCG	1 cut(s)	1910
BstH2I	RGCGCY	2 cut(s)	675, 849
BstHHI	GCGC	4 cut(s)	674, 848, 1682, 1912
BstKTI	GATC	9 cut(s)	102, 181, 313, 409, 1065, 1234, 1252, 1627, 1945
BstMAI	GTCTC	4 cut(s)	584, 708, 746, 1757
BstMBI	GATC	9 cut(s)	99, 178, 310, 406, 1062, 1231, 1249, 1624, 1942
BstMWI	GCNNNNNNNGC	4 cut(s)	361, 1223, 1679, 2021
BstNI	CCWGG	4 cut(s)	468, 836, 1057, 1456
BstNSI	RCATGY	3 cut(s)	691, 865, 1435
BstSCI	CCNGG	5 cut(s)	466, 554, 834, 1055, 1454
BstSFI	CTRYAG	1 cut(s)	1923
BstUI	CGCG	1 cut(s)	1910
BstV1I	GCAGC	6 cut(s)	1078, 1229, 1232, 1235, 2003, 2048
BstV2I	GAAGAC	1 cut(s)	1378
BstX2I	RGATCY	1 cut(s)	1624
BstYI	RGATCY	1 cut(s)	1624
BsuI	GTATCC	1 cut(s)	1847
BsuRI	GGCC	1 cut(s)	1588
BtgZI	GCGATG	1 cut(s)	264
BtsCI	GGATG	1 cut(s)	593
BtsIMutI	CAGTG	3 cut(s)	181, 210, 1093
BveI	ACCTGC	1 cut(s)	2006
CciI	TCATGA	1 cut(s)	1252
CfoI	GCGC	4 cut(s)	674, 848, 1682, 1912
Cfr10I	RCCGGY	2 cut(s)	674, 848
Cfr13I	GGNCC	2 cut(s)	991, 1306
CseI	GACGC	1 cut(s)	533
Csp6I	GTAC	2 cut(s)	1242, 1898
CviAII	CATG	5 cut(s)	533, 688, 862, 1253, 1432
CviQI	GTAC	2 cut(s)	1242, 1898
DdeI	CTNAG	8 cut(s)	494, 820, 947, 1371, 1397, 1529, 1767, 1784
DpnI	GATC	9 cut(s)	101, 180, 312, 408, 1064, 1233, 1251, 1626, 1944
DpnII	GATC	9 cut(s)	99, 178, 310, 406, 1062, 1231, 1249, 1624, 1942
DrdI	GACNNNNNNGTC	1 cut(s)	989
DseDI	GACNNNNNNGTC	1 cut(s)	989
EaeI	YGGCCR	1 cut(s)	1586
Eam1104I	CTCTTC	3 cut(s)	52, 474, 582
EarI	CTCTTC	3 cut(s)	52, 474, 582
Eco31I	GGTCTC	1 cut(s)	746
Eco32I	GATATC	1 cut(s)	381
Eco47I	GGWCC	2 cut(s)	991, 1306
Eco57I	CTGAAG	1 cut(s)	1372
Eco88I	CYCGRG	2 cut(s)	239, 1501
EcoRI	GAATTC	2 cut(s)	622, 1730
EcoRII	CCWGG	4 cut(s)	466, 834, 1055, 1454
EcoRV	GATATC	1 cut(s)	381
FaeI	CATG	5 cut(s)	536, 691, 865, 1256, 1435
FaqI	GGGAC	3 cut(s)	852, 1292, 1407
FatI	CATG	5 cut(s)	532, 687, 861, 1252, 1431
FbaI	TGATCA	4 cut(s)	99, 178, 310, 1249
FblI	GTMKAC	1 cut(s)	1175
Fnu4HI	GCNGC	7 cut(s)	1073, 1092, 1218, 1221, 1224, 1992, 2037
FokI	GGATG	1 cut(s)	580
Fsp4HI	GCNGC	7 cut(s)	1073, 1092, 1218, 1221, 1224, 1992, 2037
FspBI	CTAG	7 cut(s)	57, 398, 516, 891, 1239, 1652, 1874
GlaI	GCGC	4 cut(s)	673, 847, 1681, 1911
GluI	GCNGC	7 cut(s)	1073, 1092, 1218, 1221, 1224, 1992, 2037
HaeII	RGCGCY	2 cut(s)	675, 849
HaeIII	GGCC	1 cut(s)	1588
HapII	CCGG	8 cut(s)	460, 556, 675, 849, 920, 1191, 1304, 1757
HgaI	GACGC	1 cut(s)	533
HhaI	GCGC	4 cut(s)	674, 848, 1682, 1912
Hin1II	CATG	5 cut(s)	536, 691, 865, 1256, 1435
Hin6I	GCGC	4 cut(s)	672, 846, 1680, 1910
HinP1I	GCGC	4 cut(s)	672, 846, 1680, 1910
HincII	GTYRAC	3 cut(s)	217, 982, 2060
HindII	GTYRAC	3 cut(s)	217, 982, 2060
HindIII	AAGCTT	2 cut(s)	320, 1593
HpaII	CCGG	8 cut(s)	460, 556, 675, 849, 920, 1191, 1304, 1757
HphI	GGTGA	3 cut(s)	19, 1079, 1131
Hpy166II	GTNNAC	6 cut(s)	217, 538, 982, 1176, 1821, 2060
Hpy8I	GTNNAC	6 cut(s)	217, 538, 982, 1176, 1821, 2060
Hpy99I	CGWCG	2 cut(s)	602, 713
HpyAV	CCTTC	3 cut(s)	166, 1348, 1923
HpyCH4III	ACNGT	3 cut(s)	214, 1088, 1920
HpyCH4IV	ACGT	2 cut(s)	913, 1346
HpyCH4V	TGCA	9 cut(s)	232, 281, 404, 661, 969, 1217, 1612, 1619, 1859
HpyF10VI	GCNNNNNNNGC	4 cut(s)	361, 1223, 1679, 2021
HpyF3I	CTNAG	8 cut(s)	494, 820, 947, 1371, 1397, 1529, 1767, 1784
HpySE526I	ACGT	2 cut(s)	913, 1346
Hsp92II	CATG	5 cut(s)	536, 691, 865, 1256, 1435
HspAI	GCGC	4 cut(s)	672, 846, 1680, 1910
Kpn2I	TCCGGA	1 cut(s)	459
KpnI	GGTACC	1 cut(s)	1901
Ksp22I	TGATCA	4 cut(s)	99, 178, 310, 1249
Kzo9I	GATC	9 cut(s)	99, 178, 310, 406, 1062, 1231, 1249, 1624, 1942
LguI	GCTCTTC	1 cut(s)	52
LmnI	GCTCC	3 cut(s)	1406, 2012, 2021
Lsp1109I	GCAGC	6 cut(s)	1078, 1229, 1232, 1235, 2003, 2048
LweI	GCATC	3 cut(s)	391, 1628, 1846
MaeI	CTAG	7 cut(s)	57, 398, 516, 891, 1239, 1652, 1874
MaeII	ACGT	2 cut(s)	913, 1346
MaeIII	GTNAC	2 cut(s)	206, 1657
MalI	GATC	9 cut(s)	101, 180, 312, 408, 1064, 1233, 1251, 1626, 1944
MboI	GATC	9 cut(s)	99, 178, 310, 406, 1062, 1231, 1249, 1624, 1942
MflI	RGATCY	1 cut(s)	1624
MhlI	GDGCHC	1 cut(s)	682
MlyI	GAGTC	4 cut(s)	486, 1460, 1808, 2065
MmeI	TCCRAC	3 cut(s)	621, 732, 786
MroI	TCCGGA	1 cut(s)	459
MroXI	GAANNNNTTC	2 cut(s)	323, 1433
MseI	TTAA	6 cut(s)	1008, 1197, 1293, 1542, 1554, 1806
MspA1I	CMGCKG	2 cut(s)	511, 722
MspI	CCGG	8 cut(s)	460, 556, 675, 849, 920, 1191, 1304, 1757
MspR9I	CCNGG	5 cut(s)	468, 556, 836, 1057, 1456
MvaI	CCWGG	4 cut(s)	468, 836, 1057, 1456
MvnI	CGCG	1 cut(s)	1910
MwoI	GCNNNNNNNGC	4 cut(s)	361, 1223, 1679, 2021
NciI	CCSGG	1 cut(s)	556
NdeII	GATC	9 cut(s)	99, 178, 310, 406, 1062, 1231, 1249, 1624, 1942
NlaIII	CATG	5 cut(s)	536, 691, 865, 1256, 1435
NlaIV	GGNNCC	5 cut(s)	833, 992, 1308, 1899, 1955
NmuCI	GTSAC	1 cut(s)	206
NspI	RCATGY	3 cut(s)	691, 865, 1435
NspV	TTCGAA	2 cut(s)	779, 1690
PaeR7I	CTCGAG	2 cut(s)	239, 1501
PagI	TCATGA	1 cut(s)	1252
PaqCI	CACCTGC	1 cut(s)	2006
PciI	ACATGT	1 cut(s)	1431
PciSI	GCTCTTC	1 cut(s)	52
PcsI	WCGNNNNNNNCGW	1 cut(s)	246
PdmI	GAANNNNTTC	2 cut(s)	323, 1433
PfeI	GAWTC	6 cut(s)	113, 454, 463, 501, 1079, 1791
PfoI	TCCNGGA	1 cut(s)	554
PkrI	GCNGC	7 cut(s)	1074, 1093, 1219, 1222, 1225, 1993, 2038
PleI	GAGTC	4 cut(s)	486, 1459, 1807, 2064
PpsI	GAGTC	4 cut(s)	486, 1459, 1807, 2064
PscI	ACATGT	1 cut(s)	1431
Psp1406I	AACGTT	1 cut(s)	1346
Psp6I	CCWGG	4 cut(s)	466, 834, 1055, 1454
PspGI	CCWGG	4 cut(s)	466, 834, 1055, 1454
PspN4I	GGNNCC	5 cut(s)	833, 992, 1308, 1899, 1955
PspPI	GGNCC	2 cut(s)	991, 1306
PspXI	VCTCGAGB	1 cut(s)	239
PsuI	RGATCY	1 cut(s)	1624
PvuII	CAGCTG	2 cut(s)	511, 722
RsaI	GTAC	2 cut(s)	1243, 1899
RsaNI	GTAC	2 cut(s)	1242, 1898
SapI	GCTCTTC	1 cut(s)	52
SaqAI	TTAA	6 cut(s)	1008, 1197, 1293, 1542, 1554, 1806
SatI	GCNGC	7 cut(s)	1073, 1092, 1218, 1221, 1224, 1992, 2037
Sau3AI	GATC	9 cut(s)	99, 178, 310, 406, 1062, 1231, 1249, 1624, 1942
Sau96I	GGNCC	2 cut(s)	991, 1306
ScaI	AGTACT	1 cut(s)	1243
SchI	GAGTC	4 cut(s)	486, 1460, 1808, 2065
ScrFI	CCNGG	5 cut(s)	468, 556, 836, 1057, 1456
SduI	GDGCHC	1 cut(s)	682
SfaNI	GCATC	3 cut(s)	391, 1628, 1846
SfcI	CTRYAG	1 cut(s)	1923
Sfr274I	CTCGAG	2 cut(s)	239, 1501
SfuI	TTCGAA	2 cut(s)	779, 1690
SgrAI	CRCCGGYG	2 cut(s)	674, 848
SinI	GGWCC	2 cut(s)	991, 1306
SlaI	CTCGAG	2 cut(s)	239, 1501
SmlI	CTYRAG	7 cut(s)	239, 681, 1179, 1501, 1814, 2001, 2031
SmoI	CTYRAG	7 cut(s)	239, 681, 1179, 1501, 1814, 2001, 2031
SpeI	ACTAGT	1 cut(s)	1238
SsiI	CCGC	2 cut(s)	1073, 1908
SspI	AATATT	1 cut(s)	1687
SspMI	CTAG	7 cut(s)	57, 398, 516, 891, 1239, 1652, 1874
StyD4I	CCNGG	5 cut(s)	466, 554, 834, 1055, 1454
TaaI	ACNGT	3 cut(s)	214, 1088, 1920
TaiI	ACGT	2 cut(s)	916, 1349
TaqI	TCGA	5 cut(s)	240, 779, 1425, 1502, 1690
TatI	WGTACW	1 cut(s)	1241
TauI	GCSGC	1 cut(s)	1075
TfiI	GAWTC	6 cut(s)	113, 454, 463, 501, 1079, 1791
Tru1I	TTAA	6 cut(s)	1008, 1197, 1293, 1542, 1554, 1806
Tru9I	TTAA	6 cut(s)	1008, 1197, 1293, 1542, 1554, 1806
TscAI	CASTG	3 cut(s)	181, 217, 1093
TseFI	GTSAC	1 cut(s)	206
TseI	GCWGC	6 cut(s)	1091, 1217, 1220, 1223, 1991, 2036
Tsp45I	GTSAC	1 cut(s)	206
TspDTI	ATGAA	7 cut(s)	39, 141, 375, 711, 783, 1182, 1743
TspGWI	ACGGA	4 cut(s)	726, 1430, 1463, 1724
TspRI	CASTG	3 cut(s)	181, 217, 1093
VpaK11BI	GGWCC	2 cut(s)	991, 1306
XapI	RAATTY	7 cut(s)	347, 622, 803, 1001, 1496, 1519, 1730
XbaI	TCTAGA	1 cut(s)	515
XceI	RCATGY	3 cut(s)	691, 865, 1435
XhoI	CTCGAG	2 cut(s)	239, 1501
XmiI	GTMKAC	1 cut(s)	1175
XmnI	GAANNNNTTC	2 cut(s)	323, 1433
XspI	CTAG	7 cut(s)	57, 398, 516, 891, 1239, 1652, 1874
ZrmI	AGTACT	1 cut(s)	1243

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.