Rorug02G0343800

GTP-binding protein OBGM, mitochondrial

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
42916064 .. 42916267
204 bp
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UTR
Exon/CDS
Intron
Rorug02G0343800.1

Sequence Viewer

Length: 204 bp
ATGGATCAACAAAATGGCCTGTTTCAGATTCTTGCTCCACCAGTTAAGGAAGAAAACAAAGAACAAGTTAGAGCAGTCGCAGAACTCGCAAAGCAATGCCTCAAGTTGAGTAGTGCAGAAAGACCAACAATGGAAGAAGTGACCCGAGAGTTAAAGAGGCTGTCACTCCTGTCAGACACGTATCTTACGGTTCATGTTAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

67

Amino Acids

7.61

Weight (kDa)

5.75

Isoelectric Point (pI)

45.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 12
AflIII ACRYGT 1 cut(s) 177
AlwI GGATC 1 cut(s) 12
Ama87I CYCGRG 1 cut(s) 144
AoxI GGCC 1 cut(s) 16
AvaI CYCGRG 1 cut(s) 144
BmeT110I CYCGRG 1 cut(s) 144
BpuEI CTTGAG 1 cut(s) 86
BsaAI YACGTR 1 cut(s) 180
Bse1I ACTGG 1 cut(s) 41
Bse3DI GCAATG 1 cut(s) 101
BseMI GCAATG 1 cut(s) 101
BseNI ACTGG 1 cut(s) 41
BsgI GTGCAG 1 cut(s) 135
BshFI GGCC 1 cut(s) 18
BsiHKCI CYCGRG 1 cut(s) 144
BsnI GGCC 1 cut(s) 18
BsoBI CYCGRG 1 cut(s) 144
Bsp143I GATC 1 cut(s) 4
BspANI GGCC 1 cut(s) 18
BspPI GGATC 1 cut(s) 12
BsrDI GCAATG 1 cut(s) 101
BsrI ACTGG 1 cut(s) 41
BssMI GATC 1 cut(s) 4
Bst4CI ACNGT 1 cut(s) 190
BstBAI YACGTR 1 cut(s) 180
BstKTI GATC 1 cut(s) 7
BstMBI GATC 1 cut(s) 4
BstMWI GCNNNNNNNGC 1 cut(s) 86
BsuRI GGCC 1 cut(s) 18
CviAII CATG 1 cut(s) 194
CviJI RGCY 2 cut(s) 18, 160
CviKI_1 RGCY 2 cut(s) 18, 160
DpnI GATC 1 cut(s) 6
DpnII GATC 1 cut(s) 4
Eco88I CYCGRG 1 cut(s) 144
FaeI CATG 1 cut(s) 197
FaiI YATR 1 cut(s) 195
FatI CATG 1 cut(s) 193
HaeIII GGCC 1 cut(s) 18
Hin1II CATG 1 cut(s) 197
HinfI GANTC 1 cut(s) 28
Hpy188I TCNGA 2 cut(s) 27, 175
HpyCH4III ACNGT 1 cut(s) 190
HpyCH4IV ACGT 1 cut(s) 179
HpyCH4V TGCA 1 cut(s) 116
HpyF10VI GCNNNNNNNGC 1 cut(s) 86
HpySE526I ACGT 1 cut(s) 179
Hsp92II CATG 1 cut(s) 197
Kzo9I GATC 1 cut(s) 4
LmnI GCTCC 1 cut(s) 40
LpnPI CCDG 3 cut(s) 32, 54, 182
MaeII ACGT 1 cut(s) 179
MaeIII GTNAC 2 cut(s) 139, 162
MalI GATC 1 cut(s) 6
MboI GATC 1 cut(s) 4
MboII GAAGA 2 cut(s) 62, 146
MnlI CCTC 2 cut(s) 110, 150
MseI TTAA 3 cut(s) 45, 152, 202
MwoI GCNNNNNNNGC 1 cut(s) 86
NdeII GATC 1 cut(s) 4
NlaIII CATG 1 cut(s) 197
NmuCI GTSAC 2 cut(s) 139, 162
PfeI GAWTC 1 cut(s) 28
Ppu21I YACGTR 1 cut(s) 180
SaqAI TTAA 3 cut(s) 45, 152, 202
Sau3AI GATC 1 cut(s) 4
SetI ASST 1 cut(s) 182
SmlI CTYRAG 1 cut(s) 101
SmoI CTYRAG 1 cut(s) 101
TaaI ACNGT 1 cut(s) 190
TaiI ACGT 1 cut(s) 182
TfiI GAWTC 1 cut(s) 28
Tru1I TTAA 3 cut(s) 45, 152, 202
Tru9I TTAA 3 cut(s) 45, 152, 202
TseFI GTSAC 2 cut(s) 139, 162
Tsp45I GTSAC 2 cut(s) 139, 162
TspDTI ATGAA 1 cut(s) 182
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.