Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0002775

Physical Location & Seq

Genomic Coordinates Reverse (-)

56688485 .. 56691619

Gene Structure 3135 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG399100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1791 bp

ATGTGGGTGCAGCGTGCAAAACCGTTTAGGCAGATAAAGGCCTTTAGTCAGTCTTTTAAGTCTCCATGGATTTTTTCAATATCGTCTTCCTACTCAGATACTCCTCACAAGAAGTCGAAGCTTGCCCCTCTACAGGAAAGGAAAATGATAGACAGGTTTAGGCTATATGCTAAAGGGGGCGGGGGTGGCAGTGGTTGCTCCAGCTCTCGCCGTAGTCGCCATGATCGCCATGGCATACCTGATGGTGGGAATGGTGGAAGAGGTGGTGATGTGATTCTGGAATGTTCTCCAACAGTTTGGGACTTCAGTGGTTTGCAACCTCACCTTATAGCACAGAGAGGGGGGCATGGATCCTCGAAGAATAAAATTGGCACTCGAGGAGCGGATAAGGTTGCGCAAGTGCCCATTGGTACAGTGATTCATCTTATGAAGGGTGAAATTCCTTTGGTTGCTGAATGCCATGTTTCTAAAGATTTGGACCCATGGGAGCTTCCAGGTACTCCTATTGATGATGTAACTGGCTCTGACCAGCAGTCTGCCCCTAGTGGTCGAAATATGGCAGTGGATACTGGTAGCTCATCATCTCGACCTGAAAGAATTGATGAGGAATCAGCTCAAATGAAGGAAACCAGCCAAGTTGAATCCACTGAGGTTCCTACTCAATCTCCACCTTCTTCCTCTGAGATTTGCACCAATGATGAGACAGAGGAAGAAGAACAAATTCAATACAACGTTGCTGAGTTAACAGTAAGAGGTCAACGATTAGTTATTGCTTGTGGAGCGGAAGGTGGTCTAGGTAGCGTGTCTCTCAAAGTCCCAAAGAAGTTCAAAACTGATTCGTTAGATGCTCAGGTATCTAATGATCAGTTAACCGTTAGTGCTGGTTTACCTGGTTCTGAAGCTGTTCTCATATTAGAACTAAAGAGCATTGCCGATGTGAGCCTAGTGGGAATGCCAAATGCTGGTAAAAGCACTCTATTAGGGGCTATATCTAGGGCTAAGCCTGCAGTGGGCCATTACGCCTTCACCACTCTTAGACCCAATTTGGGGAACCTAAACTTTGATGACTTTTCACTCACAGTTGCTGATGTTCCGGGACTCATAAAGGGTGCCCACGAGAATCGTGGACTTGGACATGCATTCCTCCGCCACATAGAACGCACAAAGGTTATAGCTTATGTGGTGGATTTGGCTGCTGGATTGGATGGACGAAAAGGAACCCCACCTTGGGAACAGCTTAGGGATTTGGTCTTAGAGCTCGAGTACCATCAAGTAGGTTTATCTGATCGACCGTCACTCATAGTGGCAAATAAAATAGATGAGGAAGGGACTGAAGGCGTGCATGAAGAACTGAAAAGAAGGGTACAGCATGTTCCTATATTCCCTGTCTGTGCCATTTTGGGGGAAGGAGTTCAAGAGCTAAAAATTGGTCTTAGGAGACTTGTGAATGGTGAAATGACAGACAGACTCCAGGTCGATAAAATTATGGTTAATCCAAAAGCTGCTGAGTCTTTGGCTGATCCTGAAGAGTATCCTAATTTGTTTGAGGATTGGCAAGTTGCTCTGTCGGTTGAATCTAGAGCTGCAGAGACAAGGGGTGTTTATCCTCCTGCAGAGGAGTACGTGAAACATGTTGATAAAACACACATGACCCTTGTGGAGGCTTTCAGGAACTTGCAAGTGAATGAAGAGAACTTGCAAATGGATGAAGAGCAGCCCCGTGAAAATGGAGACTCAATGCATGAGGTTTCTGAACTGAATGGGGAACACTGTAGAGGAACATGCAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GTP1_OBG MMR_HSR1

Protein Analysis

596

Amino Acids

65.02

Weight (kDa)

5.49

Isoelectric Point (pI)

49.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GTP1_OBG	PF01018	50 - 142	3.6e-24	GTP1/OBG
MMR_HSR1	PF01926	313 - 438	7.6e-23	50S ribosome-binding GTPase
FeoB_N	PF02421	313 - 475	6.9e-10	Ferrous iron transport protein B
Arf	PF00025	313 - 474	4.4e-06	ADP-ribosylation factor family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002775)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07615
fragaria_vesca	FvH4_3g36011 FvH4_3g36011 FvH4_3g36011 FvH4_3g36011 FvH4_3g36011 FvH4_3g36011
malus_domestica	MD03G1094400.v1.1 MD11G1109500.v1.1
prunus_persica	Prupe.6G078100_v2.0.a1 Prupe.6G078100_v2.0.a1 Prupe.6G078100_v2.0.a1 Prupe.6G078100_v2.0.a1 Prupe.6G078100_v2.0.a1 Prupe.6G078100_v2.0.a1 Prupe.6G078100_v2.0.a1
pyrus_communis	pycom03g07680
rosa_chinensis	RchiOBHm_Chr2g0137651 RchiOBHm_Chr5g0064441
rosa_laevigata	RLG00000019666 RLG00000035724
rosa_multiflora	Rmu_co8264625.1_g000001 Rmu_sc0000765.1_g000032 Rmu_sc0001125.1_g000005 Rmu_sc0006937.1_g000009
rosa_roxburghii	Rroxscaffold_1G00016560 Rroxscaffold_2G00106970
rosa_rugosa	Rorug02G0343800 Rorug05G0365000
rosa_samantha	Rh2AG391600 Rh2BG399100 Rh2CG378500 Rh2DG414100 Rh5AG423300 Rh5BG438800 Rh5CG461500 Rh5DG452100
rosa_wichuraiana	Rw2G032080 Rw5G039790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	396
AccB1I	GGYRCC	1 cut(s)	1109
AccB7I	CCANNNNNTGG	1 cut(s)	962
AccBSI	CCGCTC	2 cut(s)	383, 782
AciI	CCGC	4 cut(s)	180, 383, 782, 1147
AclI	AACGTT	1 cut(s)	732
AclWI	GGATC	3 cut(s)	345, 358, 1514
AcsI	RAATTY	2 cut(s)	438, 720
AcuI	CTGAAG	4 cut(s)	289, 918, 1353, 1545
AfaI	GTAC	5 cut(s)	412, 499, 1265, 1365, 1622
AflIII	ACRYGT	1 cut(s)	1630
AgsI	TTSAA	6 cut(s)	78, 641, 725, 829, 1415, 1574
AhdI	GACNNNNNGTC	2 cut(s)	532, 1472
AjnI	CCWGG	3 cut(s)	493, 889, 1470
AjuI	GAANNNNNNNTTGG	2 cut(s)	1210, 1242
Alw21I	GWGCWC	1 cut(s)	1260
Alw26I	GTCTC	6 cut(s)	66, 695, 810, 1432, 1583, 1725
AlwI	GGATC	3 cut(s)	345, 358, 1514
AlwNI	CAGNNNCTG	1 cut(s)	1085
Ama87I	CYCGRG	2 cut(s)	375, 1259
AoxI	GGCC	2 cut(s)	39, 1012
ApeKI	GCWGC	6 cut(s)	10, 1193, 1502, 1583, 1714, 1785
ApoI	RAATTY	2 cut(s)	438, 720
Asp700I	GAANNNNTTC	3 cut(s)	720, 903, 1410
AspLEI	GCGC	1 cut(s)	397
AspS9I	GGNCC	2 cut(s)	478, 1012
AsuC2I	CCSGG	1 cut(s)	1095
AsuHPI	GGTGA	5 cut(s)	278, 314, 446, 1018, 1463
AvaI	CYCGRG	2 cut(s)	375, 1259
AvaII	GGWCC	1 cut(s)	478
BaeGI	GKGCMC	2 cut(s)	405, 1114
BamHI	GGATCC	1 cut(s)	350
BanI	GGYRCC	1 cut(s)	1109
BanII	GRGCYC	1 cut(s)	1260
BauI	CACGAG	1 cut(s)	1115
BbsI	GAAGAC	1 cut(s)	78
Bbv12I	GWGCWC	1 cut(s)	1260
BbvI	GCAGC	5 cut(s)	22, 1180, 1489, 1570, 1726
BccI	CCATC	3 cut(s)	236, 1199, 1275
BceAI	ACGGC	1 cut(s)	195
BciT130I	CCWGG	3 cut(s)	495, 891, 1472
BciVI	GTATCC	2 cut(s)	559, 1542
BclI	TGATCA	1 cut(s)	862
BcnI	CCSGG	1 cut(s)	1095
BcoDI	GTCTC	6 cut(s)	66, 695, 810, 1432, 1583, 1725
BfaI	CTAG	5 cut(s)	543, 794, 944, 993, 1578
BfmI	CTRYAG	5 cut(s)	131, 1005, 1584, 1611, 1771
BfuI	GTATCC	2 cut(s)	559, 1542
BisI	GCNGC	6 cut(s)	11, 1194, 1503, 1584, 1715, 1786
BlpI	GCTNAGC	1 cut(s)	999
BlsI	GCNGC	6 cut(s)	12, 1195, 1504, 1585, 1716, 1787
Bme1390I	CCNGG	4 cut(s)	495, 891, 1095, 1472
Bme18I	GGWCC	1 cut(s)	478
BmeRI	GACNNNNNGTC	2 cut(s)	532, 1472
BmeT110I	CYCGRG	2 cut(s)	375, 1259
BmgT120I	GGNCC	2 cut(s)	478, 1012
BmiI	GGNNCC	6 cut(s)	352, 480, 654, 1052, 1111, 1219
BmrFI	CCNGG	4 cut(s)	495, 891, 1095, 1472
BmsI	GCATC	1 cut(s)	835
BpiI	GAAGAC	1 cut(s)	78
BpmI	CTGGAG	2 cut(s)	184, 1454
Bpu10I	CCTNAGC	2 cut(s)	849, 1238
Bpu1102I	GCTNAGC	1 cut(s)	999
BpuMI	CCSGG	1 cut(s)	1095
BsaAI	YACGTR	1 cut(s)	1624
BsaJI	CCNNGG	4 cut(s)	65, 229, 482, 1226
BsaXI	ACNNNNNCTCC	2 cut(s)	649, 679
Bse1I	ACTGG	2 cut(s)	523, 574
Bse3DI	GCAATG	1 cut(s)	927
BseBI	CCWGG	3 cut(s)	495, 891, 1472
BseDI	CCNNGG	4 cut(s)	65, 229, 482, 1226
BseGI	GGATG	2 cut(s)	1210, 1711
BseMI	GCAATG	1 cut(s)	927
BseMII	CTCAG	6 cut(s)	108, 639, 672, 729, 863, 1497
BseNI	ACTGG	2 cut(s)	523, 574
BseRI	GAGGAG	3 cut(s)	93, 393, 1631
BseSI	GKGCMC	2 cut(s)	405, 1114
BseXI	GCAGC	5 cut(s)	22, 1180, 1489, 1570, 1726
BsgI	GTGCAG	1 cut(s)	29
Bsh1285I	CGRYCG	1 cut(s)	1292
BshFI	GGCC	2 cut(s)	41, 1014
BshNI	GGYRCC	1 cut(s)	1109
BsiEI	CGRYCG	1 cut(s)	1292
BsiHKAI	GWGCWC	1 cut(s)	1260
BsiHKCI	CYCGRG	2 cut(s)	375, 1259
BsiSI	CCGG	1 cut(s)	1094
BslFI	GGGAC	4 cut(s)	314, 800, 1110, 1342
BsmAI	GTCTC	6 cut(s)	66, 695, 810, 1432, 1583, 1725
BsmFI	GGGAC	4 cut(s)	314, 800, 1110, 1342
BsmI	GAATGC	3 cut(s)	461, 957, 1139
BsnI	GGCC	2 cut(s)	41, 1014
BsoBI	CYCGRG	2 cut(s)	375, 1259
Bsp1286I	GDGCHC	3 cut(s)	405, 1114, 1260
Bsp143I	GATC	5 cut(s)	223, 350, 862, 1285, 1519
Bsp1720I	GCTNAGC	1 cut(s)	999
Bsp19I	CCATGG	3 cut(s)	65, 229, 482
BspACI	CCGC	4 cut(s)	180, 383, 782, 1147
BspANI	GGCC	2 cut(s)	41, 1014
BspCNI	CTCAG	6 cut(s)	107, 640, 673, 730, 862, 1498
BspLI	GGNNCC	6 cut(s)	352, 480, 654, 1052, 1111, 1219
BspMAI	CTGCAG	3 cut(s)	1009, 1588, 1615
BspPI	GGATC	3 cut(s)	345, 358, 1514
BspQI	GCTCTTC	1 cut(s)	1704
BspT107I	GGYRCC	1 cut(s)	1109
BsrBI	CCGCTC	2 cut(s)	383, 782
BsrDI	GCAATG	1 cut(s)	927
BsrI	ACTGG	2 cut(s)	523, 574
BssECI	CCNNGG	4 cut(s)	65, 229, 482, 1226
BssMI	GATC	5 cut(s)	223, 350, 862, 1285, 1519
BssSI	CACGAG	1 cut(s)	1115
BssT1I	CCWWGG	4 cut(s)	65, 229, 482, 1226
Bst2BI	CACGAG	1 cut(s)	1115
Bst2UI	CCWGG	3 cut(s)	495, 891, 1472
Bst4CI	ACNGT	8 cut(s)	24, 295, 415, 748, 874, 1081, 1293, 1772
Bst6I	CTCTTC	4 cut(s)	253, 1521, 1683, 1704
BstAPI	GCANNNNNTGC	1 cut(s)	195
BstBAI	YACGTR	1 cut(s)	1624
BstC8I	GCNNGC	4 cut(s)	15, 123, 1005, 1340
BstDSI	CCRYGG	3 cut(s)	65, 229, 482
BstENI	CCTNNNNNAGG	1 cut(s)	1658
BstF5I	GGATG	2 cut(s)	1210, 1711
BstHHI	GCGC	1 cut(s)	397
BstKTI	GATC	5 cut(s)	226, 353, 865, 1288, 1522
BstMAI	GTCTC	6 cut(s)	66, 695, 810, 1432, 1583, 1725
BstMBI	GATC	5 cut(s)	223, 350, 862, 1285, 1519
BstMCI	CGRYCG	1 cut(s)	1292
BstMWI	GCNNNNNNNGC	6 cut(s)	186, 195, 216, 225, 779, 1004
BstNI	CCWGG	3 cut(s)	495, 891, 1472
BstNSI	RCATGY	4 cut(s)	1139, 1373, 1634, 1785
BstSCI	CCNGG	4 cut(s)	493, 889, 1093, 1470
BstSFI	CTRYAG	5 cut(s)	131, 1005, 1584, 1611, 1771
BstSLI	GKGCMC	2 cut(s)	405, 1114
BstV1I	GCAGC	5 cut(s)	22, 1180, 1489, 1570, 1726
BstV2I	GAAGAC	1 cut(s)	78
BstX2I	RGATCY	1 cut(s)	350
BstXI	CCANNNNNNTGG	1 cut(s)	297
BstYI	RGATCY	1 cut(s)	350
BsuI	GTATCC	2 cut(s)	559, 1542
BsuRI	GGCC	2 cut(s)	41, 1014
BtgI	CCRYGG	3 cut(s)	65, 229, 482
BtsCI	GGATG	2 cut(s)	1210, 1711
BtsI	GCAGTG	3 cut(s)	196, 567, 1014
BtsIMutI	CAGTG	7 cut(s)	196, 313, 420, 567, 645, 1014, 1768
Cac8I	GCNNGC	4 cut(s)	15, 123, 1005, 1340
CaiI	CAGNNNCTG	1 cut(s)	1085
CfoI	GCGC	1 cut(s)	397
Cfr13I	GGNCC	2 cut(s)	478, 1012
CsiI	ACCWGGT	1 cut(s)	889
Csp6I	GTAC	5 cut(s)	411, 498, 1264, 1364, 1621
CviQI	GTAC	5 cut(s)	411, 498, 1264, 1364, 1621
DpnI	GATC	5 cut(s)	225, 352, 864, 1287, 1521
DpnII	GATC	5 cut(s)	223, 350, 862, 1285, 1519
DriI	GACNNNNNGTC	2 cut(s)	532, 1472
Eam1104I	CTCTTC	4 cut(s)	253, 1521, 1683, 1704
Eam1105I	GACNNNNNGTC	2 cut(s)	532, 1472
EarI	CTCTTC	4 cut(s)	253, 1521, 1683, 1704
EciI	GGCGGA	1 cut(s)	1136
Ecl136II	GAGCTC	1 cut(s)	1258
Eco130I	CCWWGG	4 cut(s)	65, 229, 482, 1226
Eco147I	AGGCCT	1 cut(s)	41
Eco24I	GRGCYC	1 cut(s)	1260
Eco47I	GGWCC	1 cut(s)	478
Eco53kI	GAGCTC	1 cut(s)	1258
Eco57I	CTGAAG	4 cut(s)	289, 918, 1353, 1545
Eco88I	CYCGRG	2 cut(s)	375, 1259
EcoICRI	GAGCTC	1 cut(s)	1258
EcoNI	CCTNNNNNAGG	1 cut(s)	1658
EcoRII	CCWGG	3 cut(s)	493, 889, 1470
EcoT14I	CCWWGG	4 cut(s)	65, 229, 482, 1226
EcoT22I	ATGCAT	2 cut(s)	1141, 1743
EcoT38I	GRGCYC	1 cut(s)	1260
ErhI	CCWWGG	4 cut(s)	65, 229, 482, 1226
FaqI	GGGAC	4 cut(s)	314, 800, 1110, 1342
FauI	CCCGC	1 cut(s)	173
FbaI	TGATCA	1 cut(s)	862
Fnu4HI	GCNGC	6 cut(s)	11, 1194, 1503, 1584, 1715, 1786
FokI	GGATG	2 cut(s)	1217, 1718
FriOI	GRGCYC	1 cut(s)	1260
Fsp4HI	GCNGC	6 cut(s)	11, 1194, 1503, 1584, 1715, 1786
FspBI	CTAG	5 cut(s)	543, 794, 944, 993, 1578
FspI	TGCGCA	1 cut(s)	396
GlaI	GCGC	1 cut(s)	396
GluI	GCNGC	6 cut(s)	11, 1194, 1503, 1584, 1715, 1786
GsuI	CTGGAG	2 cut(s)	184, 1454
HaeIII	GGCC	2 cut(s)	41, 1014
HapII	CCGG	1 cut(s)	1094
HhaI	GCGC	1 cut(s)	397
Hin6I	GCGC	1 cut(s)	395
HinP1I	GCGC	1 cut(s)	395
HincII	GTYRAC	3 cut(s)	744, 758, 870
HindII	GTYRAC	3 cut(s)	744, 758, 870
HindIII	AAGCTT	1 cut(s)	119
HpaI	GTTAAC	2 cut(s)	744, 870
HpaII	CCGG	1 cut(s)	1094
HphI	GGTGA	5 cut(s)	278, 314, 446, 1018, 1463
Hpy166II	GTNNAC	5 cut(s)	744, 758, 870, 887, 1127
Hpy188I	TCNGA	6 cut(s)	97, 526, 682, 898, 1285, 1753
Hpy188III	TCNNGA	6 cut(s)	278, 585, 1415, 1523, 1578, 1669
Hpy8I	GTNNAC	5 cut(s)	744, 758, 870, 887, 1127
HpyAV	CCTTC	9 cut(s)	424, 616, 681, 779, 1033, 1319, 1328, 1353, 1400
HpyCH4III	ACNGT	8 cut(s)	24, 295, 415, 748, 874, 1081, 1293, 1772
HpyCH4IV	ACGT	2 cut(s)	732, 1623
HpyF10VI	GCNNNNNNNGC	6 cut(s)	186, 195, 216, 225, 779, 1004
HpySE526I	ACGT	2 cut(s)	732, 1623
HspAI	GCGC	1 cut(s)	395
Ksp22I	TGATCA	1 cut(s)	862
KspAI	GTTAAC	2 cut(s)	744, 870
Kzo9I	GATC	5 cut(s)	223, 350, 862, 1285, 1519
LguI	GCTCTTC	1 cut(s)	1704
LmnI	GCTCC	4 cut(s)	203, 380, 487, 779
Lsp1109I	GCAGC	5 cut(s)	22, 1180, 1489, 1570, 1726
LweI	GCATC	1 cut(s)	835
MabI	ACCWGGT	1 cut(s)	889
MaeI	CTAG	5 cut(s)	543, 794, 944, 993, 1578
MaeII	ACGT	2 cut(s)	732, 1623
MaeIII	GTNAC	2 cut(s)	514, 1293
MalI	GATC	5 cut(s)	225, 352, 864, 1287, 1521
MbiI	CCGCTC	2 cut(s)	383, 782
MboI	GATC	5 cut(s)	223, 350, 862, 1285, 1519
MflI	RGATCY	1 cut(s)	350
MhlI	GDGCHC	3 cut(s)	405, 1114, 1260
MluCI	AATT	8 cut(s)	366, 438, 597, 720, 1042, 1425, 1482, 1537
MlyI	GAGTC	4 cut(s)	1092, 1461, 1517, 1727
MmeI	TCCRAC	1 cut(s)	314
Mph1103I	ATGCAT	2 cut(s)	1141, 1743
MroXI	GAANNNNTTC	3 cut(s)	720, 903, 1410
MseI	TTAA	4 cut(s)	57, 743, 869, 1491
MspA1I	CMGCKG	1 cut(s)	1788
MspI	CCGG	1 cut(s)	1094
MspR9I	CCNGG	4 cut(s)	495, 891, 1095, 1472
Mva1269I	GAATGC	3 cut(s)	461, 957, 1139
MvaI	CCWGG	3 cut(s)	495, 891, 1472
MwoI	GCNNNNNNNGC	6 cut(s)	186, 195, 216, 225, 779, 1004
NciI	CCSGG	1 cut(s)	1095
NcoI	CCATGG	3 cut(s)	65, 229, 482
NdeII	GATC	5 cut(s)	223, 350, 862, 1285, 1519
NlaIV	GGNNCC	6 cut(s)	352, 480, 654, 1052, 1111, 1219
NmuCI	GTSAC	1 cut(s)	1293
NsbI	TGCGCA	1 cut(s)	396
NsiI	ATGCAT	2 cut(s)	1141, 1743
NspI	RCATGY	4 cut(s)	1139, 1373, 1634, 1785
PaeR7I	CTCGAG	2 cut(s)	375, 1259
PceI	AGGCCT	1 cut(s)	41
PciI	ACATGT	1 cut(s)	1630
PciSI	GCTCTTC	1 cut(s)	1704
PctI	GAATGC	3 cut(s)	461, 957, 1139
PdmI	GAANNNNTTC	3 cut(s)	720, 903, 1410
PfeI	GAWTC	7 cut(s)	274, 418, 608, 641, 836, 1120, 1574
PflMI	CCANNNNNTGG	1 cut(s)	962
PfoI	TCCNGGA	1 cut(s)	1093
PkrI	GCNGC	6 cut(s)	12, 1195, 1504, 1585, 1716, 1787
PleI	GAGTC	4 cut(s)	1092, 1461, 1516, 1727
PpsI	GAGTC	4 cut(s)	1092, 1461, 1516, 1727
Ppu21I	YACGTR	1 cut(s)	1624
PscI	ACATGT	1 cut(s)	1630
Psp124BI	GAGCTC	1 cut(s)	1260
Psp1406I	AACGTT	1 cut(s)	732
Psp6I	CCWGG	3 cut(s)	493, 889, 1470
PspGI	CCWGG	3 cut(s)	493, 889, 1470
PspN4I	GGNNCC	6 cut(s)	352, 480, 654, 1052, 1111, 1219
PspPI	GGNCC	2 cut(s)	478, 1012
PspXI	VCTCGAGB	2 cut(s)	375, 1259
PsrI	GAACNNNNNNTAC	2 cut(s)	1356, 1388
PstI	CTGCAG	3 cut(s)	1009, 1588, 1615
PstNI	CAGNNNCTG	1 cut(s)	1085
PsuI	RGATCY	1 cut(s)	350
PvuII	CAGCTG	1 cut(s)	1788
RsaI	GTAC	5 cut(s)	412, 499, 1265, 1365, 1622
RsaNI	GTAC	5 cut(s)	411, 498, 1264, 1364, 1621
SacI	GAGCTC	1 cut(s)	1260
SapI	GCTCTTC	1 cut(s)	1704
SaqAI	TTAA	4 cut(s)	57, 743, 869, 1491
SatI	GCNGC	6 cut(s)	11, 1194, 1503, 1584, 1715, 1786
Sau3AI	GATC	5 cut(s)	223, 350, 862, 1285, 1519
Sau96I	GGNCC	2 cut(s)	478, 1012
SchI	GAGTC	4 cut(s)	1092, 1461, 1517, 1727
ScrFI	CCNGG	4 cut(s)	495, 891, 1095, 1472
SduI	GDGCHC	3 cut(s)	405, 1114, 1260
SexAI	ACCWGGT	1 cut(s)	889
SfaNI	GCATC	1 cut(s)	835
SfcI	CTRYAG	5 cut(s)	131, 1005, 1584, 1611, 1771
Sfr274I	CTCGAG	2 cut(s)	375, 1259
SinI	GGWCC	1 cut(s)	478
SlaI	CTCGAG	2 cut(s)	375, 1259
SmlI	CTYRAG	2 cut(s)	375, 1259
SmoI	CTYRAG	2 cut(s)	375, 1259
Sse9I	AATT	8 cut(s)	366, 438, 597, 720, 1042, 1425, 1482, 1537
SseBI	AGGCCT	1 cut(s)	41
SsiI	CCGC	4 cut(s)	180, 383, 782, 1147
SspMI	CTAG	5 cut(s)	543, 794, 944, 993, 1578
SstI	GAGCTC	1 cut(s)	1260
StuI	AGGCCT	1 cut(s)	41
StyD4I	CCNGG	4 cut(s)	493, 889, 1093, 1470
StyI	CCWWGG	4 cut(s)	65, 229, 482, 1226
TaaI	ACNGT	8 cut(s)	24, 295, 415, 748, 874, 1081, 1293, 1772
TaiI	ACGT	2 cut(s)	735, 1626
TaqI	TCGA	8 cut(s)	116, 356, 376, 550, 586, 1260, 1288, 1476
TasI	AATT	8 cut(s)	366, 438, 597, 720, 1042, 1425, 1482, 1537
TfiI	GAWTC	7 cut(s)	274, 418, 608, 641, 836, 1120, 1574
Tru1I	TTAA	4 cut(s)	57, 743, 869, 1491
Tru9I	TTAA	4 cut(s)	57, 743, 869, 1491
TscAI	CASTG	7 cut(s)	196, 313, 420, 567, 652, 1014, 1775
TseFI	GTSAC	1 cut(s)	1293
TseI	GCWGC	6 cut(s)	10, 1193, 1502, 1583, 1714, 1785
Tsp45I	GTSAC	1 cut(s)	1293
TspDTI	ATGAA	6 cut(s)	410, 443, 635, 1359, 1701, 1722
TspRI	CASTG	7 cut(s)	196, 313, 420, 567, 652, 1014, 1775
Van91I	CCANNNNNTGG	1 cut(s)	962
VpaK11BI	GGWCC	1 cut(s)	478
XagI	CCTNNNNNAGG	1 cut(s)	1658
XapI	RAATTY	2 cut(s)	438, 720
XbaI	TCTAGA	1 cut(s)	1577
XceI	RCATGY	4 cut(s)	1139, 1373, 1634, 1785
XcmI	CCANNNNNNNNNTGG	2 cut(s)	227, 1121
XhoI	CTCGAG	2 cut(s)	375, 1259
XmnI	GAANNNNTTC	3 cut(s)	720, 903, 1410
XspI	CTAG	5 cut(s)	543, 794, 944, 993, 1578
Zsp2I	ATGCAT	2 cut(s)	1141, 1743

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.