Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0015749

Physical Location & Seq

Genomic Coordinates Forward (+)

47453708 .. 47456485

Gene Structure 2778 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0372100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2148 bp

ATGCCAAAGCCGCAGGGACGGCAATGGTACGAGTGCATGACCATACGGAGCACAAAAACGGAAACCCCATTTACACTTGAGCTTTTGGTCAGACCAGCGCCCACTCTTCACTCTTGTTGCTCCCCCGAGATCTCTCATCAGATGGATGAAGTGTCTCTCAACACGGAGCCAGCGGGCGATGATGATGCTGATGGTTATGAGATTGAAGGAGACTGTGCAATGACAGAGTTTGTGAGTCAAACCGGCATTATGCAAGGAGAGAATCCTCTCCCTCCTTCGGCTGGAATGGAGTTCGATTCTTATGAGGATGTATATTACTTCTACAATTGCTATGCTAAGCAACAGGGGTTCGGGGTTAGAGTGAGTAATACATGGTATAGAAAGAGCAAGGAAAGGTACAGAGGAAAGCTTAGCTGCAGTAGTGCAGGTTTCAAAAAGAAGAGTGAAGCTAATCGCCCAAGGCCAGAAACTAGAACCGGTTGTCCAGCAATGGTGAAGTTCAGGTTAATGGAATCCAACAGGTGGAGAATTATTGAAGTTGAGCTCGAGCACAACCATTTGATCAGTCCAGCAAGTGGCAAATTTTATAAATCCCACAAGAGCATAGGTGGTGGAACCAAAAGATCATTGCAGTTGGATAGTGCTGAAGAAGTACAAAAGATAAGGCTATTCCGAACGGTGATTATTGATTCTGAGGGTAACAGAAGCATAGATGTTGACGAAGGAGAATCTGGTAATAAAGTTGACTACTCCAATCAATTGAAGCTTAAAGAAGGAGATGCCAAAGAGCTTCAGAATTTCTTTTCTCGCCTGCAATTGATGGATCCAGACTTCTTTTATGTAGTGGATCTAAATGAGAAAGGATGCTTGAGAAATTTGTTTTGGGCTGATGCGAGGAGTAGGGTTGCGTACACTTATTTCAGTGACGTAGTTGCCATTGACACTACATGCTTGGAAAACAAATTTGAAGTCCCATTGGTCTCATTCAGTGGAGTCAATCACCATGGACAATCTGTGCTGCTGGGTTGTGGTTTACTTGCAAGTGGGACTATTGAATCCTATACATGGTTGTTTAGAGCTTGGCTTACATGCATATTGGGACGTCCTCCACAAGCCATCATAACTGACCAATGCAGAACATTACAAACTGCTATTGCTGATGTTTTCCCTAGAGCTTCTCATTGTCTTTGCTTGTCTCAAATAATGCACAAGATTCCAGAAAATTTGGGAGGTTCATTTGAGTATGAGGCAATTAAAGCAGCTTTTATTAGAGCAGTTTACTATTCTTTGAGGGTGGAGGAATTTGAAGCAGCCTGGGAGGATATGGTCCAGCGTCATGGAATTAGAGATCATAAATGGCTTCAAGCATTATATGATGATCGAAAGCGGTGGGTTCCAGTATTTTTGAAGGATATATTTTTGGCAGGAATGTTTCCTATGCAACCAGATGAGGTTGTCTCTTCATTTTCTGAAGAATTTCTGGTTAAAAGTACTCCTCTGAAGGAATTTCTAGATAAGTATGATCAAGCTCTGCAGACTCATCATCAGCTGGAAGCCTTGGCAGATTTGGATTCAAGAAACTCGAGTTATATGTTCAAATCGGGAAGTCATTTTGAGTTGCAACTCTCAGAACTGTACACTAATGACATCTTAAGGAAGTTTGGAAAGGAGGTAGAGGGGATGTACTCTTGTTTTAGCACAAGACAATTAAATGTCGATGGGCCAGTCATTACATATACAGTGAAGGAACAAACTGAAGTTGATGGAAATAGGAGAGAGATGAGAGATTATGAGGTTTTGTATAATCCATCTGAGATGGAGGTCCTTTGCGTCTGTGGTATGTTCAACTTGAAAGGATATTTATGCAGGCATGCACTCTCCATCCTAAACCAAAATGGCATGCAGGAGATTCCAGCTCAATACATTCTTTCACGATGGAGAAAAGATGTTAAGCGCAGTTATGTTTATGATCACAGCTGCACTGGCATTGATATTAATAACCCAGTTCACAGGTACGATCATCTGTATAAATGCATCGTGCAGGTTGTGGAGGAAGGGAGGAAATCACAAGACCGTTACAAGATTGCATTGCAGGAATTGGATGGGATATTGAACAAGCTTTGTATTACCGAAGATTGTGCCTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4216 DUF4218 Transpos_assoc Transposase_21

Protein Analysis

715

Amino Acids

82.17

Weight (kDa)

5.69

Isoelectric Point (pI)

49.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAR1	PF03101	107 - 188	1.2e-21	FAR1 DNA-binding domain
MULE	PF10551	310 - 404	6.2e-27	MULE transposase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015749)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr3g0462471 RchiOBHm_Chr5g0082411
rosa_multiflora	Rmu_co8410823.1_g000001 Rmu_sc0002187.1_g000065
rosa_roxburghii	Rroxscaffold_2G00137060 Rroxscaffold_3G00237620
rosa_rugosa	Rorug02G0315000 Rorug02G0372100 Rorug06G0055000
rosa_samantha	Rh2AG032600 Rh2AG032700 Rh2DG032300 Rh3CG322400 Rh3DG222000 Rh5AG164400 Rh7BG436300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	588
AatII	GACGTC	1 cut(s)	1105
Acc36I	ACCTGC	2 cut(s)	416, 2032
AccB7I	CCANNNNNTGG	2 cut(s)	522, 575
AciI	CCGC	3 cut(s)	11, 173, 1387
AclWI	GGATC	3 cut(s)	818, 831, 855
AcsI	RAATTY	8 cut(s)	581, 796, 874, 962, 1222, 1301, 1475, 1505
AcuI	CTGAAG	5 cut(s)	666, 776, 1491, 1520, 1776
AcyI	GRCGYC	1 cut(s)	1102
AfaI	GTAC	8 cut(s)	29, 398, 654, 911, 1492, 1637, 1685, 2015
AfiI	CCNNNNNNNGG	5 cut(s)	277, 281, 522, 575, 1065
AflII	CTTAAG	1 cut(s)	1651
AgeI	ACCGGT	1 cut(s)	476
AjnI	CCWGG	1 cut(s)	1313
AjuI	GAANNNNNNNTTGG	2 cut(s)	865, 897
AloI	GAACNNNNNNTCC	2 cut(s)	466, 498
Alw21I	GWGCWC	3 cut(s)	53, 546, 552
Alw26I	GTCTC	5 cut(s)	159, 204, 985, 1200, 1462
AlwI	GGATC	3 cut(s)	818, 831, 855
Ama87I	CYCGRG	3 cut(s)	125, 545, 1582
AoxI	GGCC	2 cut(s)	461, 1721
ApeKI	GCWGC	5 cut(s)	414, 1018, 1259, 1310, 1977
ApoI	RAATTY	8 cut(s)	581, 796, 874, 962, 1222, 1301, 1475, 1505
ArsI	GACNNNNNNTTYG	2 cut(s)	954, 986
AseI	ATTAAT	1 cut(s)	1995
AsiGI	ACCGGT	1 cut(s)	476
Asp700I	GAANNNNTTC	1 cut(s)	1476
AspLEI	GCGC	2 cut(s)	100, 1956
AspS9I	GGNCC	3 cut(s)	1327, 1721, 1822
AsuHPI	GGTGA	3 cut(s)	505, 691, 992
AvaI	CYCGRG	3 cut(s)	125, 545, 1582
AvaII	GGWCC	2 cut(s)	1327, 1822
BamHI	GGATCC	1 cut(s)	823
BanII	GRGCYC	1 cut(s)	546
Bbv12I	GWGCWC	3 cut(s)	53, 546, 552
BbvI	GCAGC	5 cut(s)	401, 1005, 1271, 1322, 1964
BceAI	ACGGC	1 cut(s)	35
BcgI	CGANNNNNNTGC	3 cut(s)	167, 201, 2120
BciT130I	CCWGG	1 cut(s)	1315
BclI	TGATCA	3 cut(s)	561, 1522, 1969
BcoDI	GTCTC	5 cut(s)	159, 204, 985, 1200, 1462
BfaI	CTAG	3 cut(s)	471, 1170, 1511
BfmI	CTRYAG	2 cut(s)	415, 1532
BfoI	RGCGCY	1 cut(s)	101
BfrI	CTTAAG	1 cut(s)	1651
BfuAI	ACCTGC	2 cut(s)	416, 2032
BglII	AGATCT	1 cut(s)	129
BisI	GCNGC	6 cut(s)	11, 415, 1019, 1260, 1311, 1978
BlpI	GCTNAGC	2 cut(s)	336, 410
BlsI	GCNGC	6 cut(s)	12, 416, 1020, 1261, 1312, 1979
BmcAI	AGTACT	1 cut(s)	1492
Bme1390I	CCNGG	1 cut(s)	1315
Bme18I	GGWCC	2 cut(s)	1327, 1822
BmeT110I	CYCGRG	3 cut(s)	125, 545, 1582
BmgT120I	GGNCC	3 cut(s)	1327, 1721, 1822
BmiI	GGNNCC	4 cut(s)	168, 616, 825, 1395
BmrFI	CCNGG	1 cut(s)	1315
BmrI	ACTGGG	1 cut(s)	1997
BmsI	GCATC	5 cut(s)	175, 769, 854, 880, 2043
BmuI	ACTGGG	1 cut(s)	1997
BplI	GAGNNNNNCTC	2 cut(s)	1442, 1474
Bpu1102I	GCTNAGC	2 cut(s)	336, 410
BpuEI	CTTGAG	2 cut(s)	98, 889
BsaHI	GRCGYC	1 cut(s)	1102
BsaI	GGTCTC	1 cut(s)	985
BsaJI	CCNNGG	4 cut(s)	458, 1003, 1314, 1557
BsaWI	WCCGGW	1 cut(s)	476
Bsc4I	CCNNNNNNNGG	5 cut(s)	277, 281, 522, 575, 1065
Bse118I	RCCGGY	2 cut(s)	242, 476
Bse1I	ACTGG	4 cut(s)	1397, 1724, 1987, 2003
Bse3DI	GCAATG	5 cut(s)	29, 225, 495, 626, 2087
BseBI	CCWGG	1 cut(s)	1315
BseDI	CCNNGG	4 cut(s)	458, 1003, 1314, 1557
BseGI	GGATG	6 cut(s)	151, 313, 869, 1686, 1881, 2107
BseLI	CCNNNNNNNGG	5 cut(s)	277, 281, 522, 575, 1065
BseMI	GCAATG	5 cut(s)	29, 225, 495, 626, 2087
BseMII	CTCAG	3 cut(s)	684, 1641, 1803
BseNI	ACTGG	4 cut(s)	1397, 1724, 1987, 2003
BseRI	GAGGAG	2 cut(s)	910, 1485
BseXI	GCAGC	5 cut(s)	401, 1005, 1271, 1322, 1964
BseYI	CCCAGC	1 cut(s)	1021
BsgI	GTGCAG	3 cut(s)	444, 1963, 2060
BshFI	GGCC	2 cut(s)	463, 1723
BshTI	ACCGGT	1 cut(s)	476
BsiHKAI	GWGCWC	3 cut(s)	53, 546, 552
BsiHKCI	CYCGRG	3 cut(s)	125, 545, 1582
BsiSI	CCGG	2 cut(s)	243, 477
BslFI	GGGAC	4 cut(s)	30, 956, 1060, 1113
BslI	CCNNNNNNNGG	5 cut(s)	277, 281, 522, 575, 1065
BsmAI	GTCTC	5 cut(s)	159, 204, 985, 1200, 1462
BsmFI	GGGAC	4 cut(s)	30, 956, 1060, 1113
BsnI	GGCC	2 cut(s)	463, 1723
Bso31I	GGTCTC	1 cut(s)	985
BsoBI	CYCGRG	3 cut(s)	125, 545, 1582
Bsp1286I	GDGCHC	3 cut(s)	53, 546, 552
Bsp1407I	TGTACA	1 cut(s)	1635
Bsp1720I	GCTNAGC	2 cut(s)	336, 410
Bsp19I	CCATGG	1 cut(s)	1003
BspACI	CCGC	3 cut(s)	11, 173, 1387
BspANI	GGCC	2 cut(s)	463, 1723
BspCNI	CTCAG	3 cut(s)	685, 1640, 1804
BspLI	GGNNCC	4 cut(s)	168, 616, 825, 1395
BspMAI	CTGCAG	2 cut(s)	419, 1536
BspMI	ACCTGC	2 cut(s)	416, 2032
BspPI	GGATC	3 cut(s)	818, 831, 855
BspTI	CTTAAG	1 cut(s)	1651
BspTNI	GGTCTC	1 cut(s)	985
BsrDI	GCAATG	5 cut(s)	29, 225, 495, 626, 2087
BsrFI	RCCGGY	2 cut(s)	242, 476
BsrGI	TGTACA	1 cut(s)	1635
BsrI	ACTGG	4 cut(s)	1397, 1724, 1987, 2003
BssAI	RCCGGY	2 cut(s)	242, 476
BssECI	CCNNGG	4 cut(s)	458, 1003, 1314, 1557
BssNI	GRCGYC	1 cut(s)	1102
BssT1I	CCWWGG	3 cut(s)	458, 1003, 1557
Bst2UI	CCWGG	1 cut(s)	1315
Bst4CI	ACNGT	5 cut(s)	215, 679, 1635, 1741, 2075
Bst6I	CTCTTC	3 cut(s)	111, 434, 1465
BstACI	GRCGYC	1 cut(s)	1102
BstAFI	CTTAAG	1 cut(s)	1651
BstAUI	TGTACA	1 cut(s)	1635
BstC8I	GCNNGC	6 cut(s)	171, 175, 812, 1868, 1872, 1901
BstDEI	CTNAG	5 cut(s)	336, 410, 693, 1627, 1812
BstDSI	CCRYGG	1 cut(s)	1003
BstF5I	GGATG	6 cut(s)	151, 313, 869, 1686, 1881, 2107
BstH2I	RGCGCY	1 cut(s)	101
BstHHI	GCGC	2 cut(s)	100, 1956
BstMAI	GTCTC	5 cut(s)	159, 204, 985, 1200, 1462
BstMWI	GCNNNNNNNGC	4 cut(s)	10, 19, 1256, 1983
BstNI	CCWGG	1 cut(s)	1315
BstNSI	RCATGY	4 cut(s)	951, 1092, 1874, 1903
BstSCI	CCNGG	1 cut(s)	1313
BstSFI	CTRYAG	2 cut(s)	415, 1532
BstV1I	GCAGC	5 cut(s)	401, 1005, 1271, 1322, 1964
BstX2I	RGATCY	3 cut(s)	129, 823, 847
BstXI	CCANNNNNNTGG	1 cut(s)	1337
BstYI	RGATCY	3 cut(s)	129, 823, 847
BsuRI	GGCC	2 cut(s)	463, 1723
BtgI	CCRYGG	1 cut(s)	1003
BtgZI	GCGATG	1 cut(s)	192
BtsCI	GGATG	6 cut(s)	151, 313, 869, 1686, 1881, 2107
BtsIMutI	CAGTG	4 cut(s)	928, 994, 1746, 1980
BveI	ACCTGC	2 cut(s)	416, 2032
Cac8I	GCNNGC	6 cut(s)	171, 175, 812, 1868, 1872, 1901
CfoI	GCGC	2 cut(s)	100, 1956
Cfr10I	RCCGGY	2 cut(s)	242, 476
Cfr13I	GGNCC	3 cut(s)	1327, 1721, 1822
CseI	GACGC	2 cut(s)	1322, 1819
Csp6I	GTAC	8 cut(s)	28, 397, 653, 910, 1491, 1636, 1684, 2014
CspAI	ACCGGT	1 cut(s)	476
CviAII	CATG	9 cut(s)	37, 372, 948, 1004, 1065, 1089, 1337, 1871, 1900
CviQI	GTAC	8 cut(s)	28, 397, 653, 910, 1491, 1636, 1684, 2014
DdeI	CTNAG	5 cut(s)	336, 410, 693, 1627, 1812
Eam1104I	CTCTTC	3 cut(s)	111, 434, 1465
EarI	CTCTTC	3 cut(s)	111, 434, 1465
Ecl136II	GAGCTC	1 cut(s)	544
Eco130I	CCWWGG	3 cut(s)	458, 1003, 1557
Eco24I	GRGCYC	1 cut(s)	546
Eco31I	GGTCTC	1 cut(s)	985
Eco47I	GGWCC	2 cut(s)	1327, 1822
Eco53kI	GAGCTC	1 cut(s)	544
Eco57I	CTGAAG	5 cut(s)	666, 776, 1491, 1520, 1776
Eco88I	CYCGRG	3 cut(s)	125, 545, 1582
EcoICRI	GAGCTC	1 cut(s)	544
EcoO109I	RGGNCCY	1 cut(s)	1822
EcoRII	CCWGG	1 cut(s)	1313
EcoT14I	CCWWGG	3 cut(s)	458, 1003, 1557
EcoT22I	ATGCAT	2 cut(s)	1094, 2036
EcoT38I	GRGCYC	1 cut(s)	546
ErhI	CCWWGG	3 cut(s)	458, 1003, 1557
FaeI	CATG	9 cut(s)	40, 375, 951, 1007, 1068, 1092, 1340, 1874, 1903
FaqI	GGGAC	4 cut(s)	30, 956, 1060, 1113
FatI	CATG	9 cut(s)	36, 371, 947, 1003, 1064, 1088, 1336, 1870, 1899
FauI	CCCGC	1 cut(s)	166
FbaI	TGATCA	3 cut(s)	561, 1522, 1969
Fnu4HI	GCNGC	6 cut(s)	11, 415, 1019, 1260, 1311, 1978
FokI	GGATG	6 cut(s)	158, 320, 876, 1693, 1868, 2114
FriOI	GRGCYC	1 cut(s)	546
Fsp4HI	GCNGC	6 cut(s)	11, 415, 1019, 1260, 1311, 1978
FspBI	CTAG	3 cut(s)	471, 1170, 1511
GlaI	GCGC	2 cut(s)	99, 1955
GluI	GCNGC	6 cut(s)	11, 415, 1019, 1260, 1311, 1978
GsaI	CCCAGC	1 cut(s)	1025
HaeII	RGCGCY	1 cut(s)	101
HaeIII	GGCC	2 cut(s)	463, 1723
HapII	CCGG	2 cut(s)	243, 477
HgaI	GACGC	2 cut(s)	1322, 1819
HhaI	GCGC	2 cut(s)	100, 1956
Hin1I	GRCGYC	1 cut(s)	1102
Hin1II	CATG	9 cut(s)	40, 375, 951, 1007, 1068, 1092, 1340, 1874, 1903
Hin6I	GCGC	2 cut(s)	98, 1954
HinP1I	GCGC	2 cut(s)	98, 1954
HincII	GTYRAC	2 cut(s)	718, 745
HindII	GTYRAC	2 cut(s)	718, 745
HindIII	AAGCTT	3 cut(s)	407, 764, 2117
HpaII	CCGG	2 cut(s)	243, 477
HphI	GGTGA	3 cut(s)	505, 691, 992
Hpy166II	GTNNAC	7 cut(s)	718, 745, 912, 1034, 1279, 1638, 2008
Hpy188I	TCNGA	9 cut(s)	92, 141, 674, 694, 795, 1471, 1500, 1630, 1813
Hpy188III	TCNNGA	6 cut(s)	827, 1217, 1511, 1575, 1602, 1932
Hpy8I	GTNNAC	7 cut(s)	718, 745, 912, 1034, 1279, 1638, 2008
HpyAV	CCTTC	8 cut(s)	200, 285, 716, 767, 1402, 1495, 1738, 2048
HpyCH4III	ACNGT	5 cut(s)	215, 679, 1635, 1741, 2075
HpyCH4IV	ACGT	2 cut(s)	927, 1102
HpyF10VI	GCNNNNNNNGC	4 cut(s)	10, 19, 1256, 1983
HpyF3I	CTNAG	5 cut(s)	336, 410, 693, 1627, 1812
HpySE526I	ACGT	2 cut(s)	927, 1102
Hsp92I	GRCGYC	1 cut(s)	1102
Hsp92II	CATG	9 cut(s)	40, 375, 951, 1007, 1068, 1092, 1340, 1874, 1903
HspAI	GCGC	2 cut(s)	98, 1954
Ksp22I	TGATCA	3 cut(s)	561, 1522, 1969
LmnI	GCTCC	3 cut(s)	48, 125, 166
Lsp1109I	GCAGC	5 cut(s)	401, 1005, 1271, 1322, 1964
LweI	GCATC	5 cut(s)	175, 769, 854, 880, 2043
MaeI	CTAG	3 cut(s)	471, 1170, 1511
MaeII	ACGT	2 cut(s)	927, 1102
MaeIII	GTNAC	3 cut(s)	698, 923, 2075
MboII	GAAGA	6 cut(s)	98, 451, 659, 1452, 1484, 2144
MfeI	CAATTG	3 cut(s)	325, 758, 815
MflI	RGATCY	3 cut(s)	129, 823, 847
MhlI	GDGCHC	3 cut(s)	53, 546, 552
MlyI	GAGTC	3 cut(s)	244, 1002, 1531
MmeI	TCCRAC	2 cut(s)	540, 615
Mph1103I	ATGCAT	2 cut(s)	1094, 2036
MroXI	GAANNNNTTC	1 cut(s)	1476
MseI	TTAA	8 cut(s)	506, 768, 1254, 1485, 1652, 1709, 1950, 1995
MspA1I	CMGCKG	3 cut(s)	173, 1549, 1977
MspCI	CTTAAG	1 cut(s)	1651
MspI	CCGG	2 cut(s)	243, 477
MspR9I	CCNGG	1 cut(s)	1315
MunI	CAATTG	3 cut(s)	325, 758, 815
MvaI	CCWGG	1 cut(s)	1315
MwoI	GCNNNNNNNGC	4 cut(s)	10, 19, 1256, 1983
NcoI	CCATGG	1 cut(s)	1003
NlaIII	CATG	9 cut(s)	40, 375, 951, 1007, 1068, 1092, 1340, 1874, 1903
NlaIV	GGNNCC	4 cut(s)	168, 616, 825, 1395
NmuCI	GTSAC	1 cut(s)	923
NsiI	ATGCAT	2 cut(s)	1094, 2036
NspI	RCATGY	4 cut(s)	951, 1092, 1874, 1903
PaeI	GCATGC	2 cut(s)	1874, 1903
PaeR7I	CTCGAG	2 cut(s)	545, 1582
PdmI	GAANNNNTTC	1 cut(s)	1476
PfeI	GAWTC	9 cut(s)	262, 296, 512, 689, 728, 1055, 1213, 1571, 1909
PflMI	CCANNNNNTGG	2 cut(s)	522, 575
PinAI	ACCGGT	1 cut(s)	476
PkrI	GCNGC	6 cut(s)	12, 416, 1020, 1261, 1312, 1979
PleI	GAGTC	3 cut(s)	243, 1001, 1531
PpsI	GAGTC	3 cut(s)	243, 1001, 1531
PpuMI	RGGWCCY	1 cut(s)	1822
PshBI	ATTAAT	1 cut(s)	1995
PsiI	TTATAA	1 cut(s)	588
Psp124BI	GAGCTC	1 cut(s)	546
Psp5II	RGGWCCY	1 cut(s)	1822
Psp6I	CCWGG	1 cut(s)	1313
PspFI	CCCAGC	1 cut(s)	1021
PspGI	CCWGG	1 cut(s)	1313
PspN4I	GGNNCC	4 cut(s)	168, 616, 825, 1395
PspPI	GGNCC	3 cut(s)	1327, 1721, 1822
PspPPI	RGGWCCY	1 cut(s)	1822
PspXI	VCTCGAGB	2 cut(s)	545, 1582
PstI	CTGCAG	2 cut(s)	419, 1536
PsuI	RGATCY	3 cut(s)	129, 823, 847
PvuII	CAGCTG	2 cut(s)	1549, 1977
RsaI	GTAC	8 cut(s)	29, 398, 654, 911, 1492, 1637, 1685, 2015
RsaNI	GTAC	8 cut(s)	28, 397, 653, 910, 1491, 1636, 1684, 2014
SacI	GAGCTC	1 cut(s)	546
SaqAI	TTAA	8 cut(s)	506, 768, 1254, 1485, 1652, 1709, 1950, 1995
SatI	GCNGC	6 cut(s)	11, 415, 1019, 1260, 1311, 1978
Sau96I	GGNCC	3 cut(s)	1327, 1721, 1822
ScaI	AGTACT	1 cut(s)	1492
SchI	GAGTC	3 cut(s)	244, 1002, 1531
ScrFI	CCNGG	1 cut(s)	1315
SduI	GDGCHC	3 cut(s)	53, 546, 552
SfaNI	GCATC	5 cut(s)	175, 769, 854, 880, 2043
SfcI	CTRYAG	2 cut(s)	415, 1532
Sfr274I	CTCGAG	2 cut(s)	545, 1582
SinI	GGWCC	2 cut(s)	1327, 1822
SlaI	CTCGAG	2 cut(s)	545, 1582
SmlI	CTYRAG	5 cut(s)	77, 545, 868, 1582, 1651
SmoI	CTYRAG	5 cut(s)	77, 545, 868, 1582, 1651
SphI	GCATGC	2 cut(s)	1874, 1903
SsiI	CCGC	3 cut(s)	11, 173, 1387
SspMI	CTAG	3 cut(s)	471, 1170, 1511
SstI	GAGCTC	1 cut(s)	546
StyD4I	CCNGG	1 cut(s)	1313
StyI	CCWWGG	3 cut(s)	458, 1003, 1557
TaaI	ACNGT	5 cut(s)	215, 679, 1635, 1741, 2075
TaiI	ACGT	2 cut(s)	930, 1105
TaqI	TCGA	5 cut(s)	294, 546, 1381, 1583, 1716
TatI	WGTACW	4 cut(s)	652, 1490, 1635, 1683
TauI	GCSGC	1 cut(s)	13
TfiI	GAWTC	9 cut(s)	262, 296, 512, 689, 728, 1055, 1213, 1571, 1909
Tru1I	TTAA	8 cut(s)	506, 768, 1254, 1485, 1652, 1709, 1950, 1995
Tru9I	TTAA	8 cut(s)	506, 768, 1254, 1485, 1652, 1709, 1950, 1995
TscAI	CASTG	4 cut(s)	928, 994, 1746, 1987
TseFI	GTSAC	1 cut(s)	923
TseI	GCWGC	5 cut(s)	414, 1018, 1259, 1310, 1977
Tsp45I	GTSAC	1 cut(s)	923
TspDTI	ATGAA	3 cut(s)	162, 1224, 1452
TspGWI	ACGGA	3 cut(s)	61, 74, 179
TspRI	CASTG	4 cut(s)	928, 994, 1746, 1987
Van91I	CCANNNNNTGG	2 cut(s)	522, 575
Vha464I	CTTAAG	1 cut(s)	1651
VpaK11BI	GGWCC	2 cut(s)	1327, 1822
VspI	ATTAAT	1 cut(s)	1995
XapI	RAATTY	8 cut(s)	581, 796, 874, 962, 1222, 1301, 1475, 1505
XbaI	TCTAGA	1 cut(s)	1510
XceI	RCATGY	4 cut(s)	951, 1092, 1874, 1903
XhoI	CTCGAG	2 cut(s)	545, 1582
XmnI	GAANNNNTTC	1 cut(s)	1476
XspI	CTAG	3 cut(s)	471, 1170, 1511
ZraI	GACGTC	1 cut(s)	1103
ZrmI	AGTACT	1 cut(s)	1492
Zsp2I	ATGCAT	2 cut(s)	1094, 2036

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.