Rorug02G0411700

Protein of unknown function (DUF1666)

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
52782978 .. 52790067
7090 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0411700.1

Sequence Viewer

Length: 3324 bp
ATGATGATGTCAGCAGCCTGTGACGTCAACCCTACACAAAGGCCTCATTCTTCACTGCTCTCAAAGCCTCCTGCGCATTTGTCTCACTTATTATTACTAGCTATATTGGCTTTTTTGATCTTGGCACAGGGACAAGACTTATATGACTTTGAACAAATTGACGACCCTACTGTTCTCCCACTCATCTCACAGATTGTGTATGGCCGCATCTCCAATGCCACAGCAATTCTCAGTCGGGATCTTAGCAACCATTCCAGCTTCTGTGTAAAAGACCCGGAAGCTGATTGGAACCAGCTGGCATTTAACTTTTCGTCCAATCTGGATTTCTTGGAATCATGCATTCAAAAGACTAAAGGAGATTTTGCACTGCGTTTGTGTACATCAGCGGAGATGAAATTCTACTTCAAAAGTTTATTTGAAAAATCTGAGAGCGCAAATTACGTGAAGCCTAATGAAAATTGTAATTTTACCTCATGGATTTCGGGGTGTGAACCTGGATGGGCTTGTAGCATTGGCCAGAATCAGCATGTTGACCTTCAAAATTCAGACGACATTCTTGCTAGAACTCACAACTGCCAGCCTTGTTGTGACGGTTTCTTCTGTCCGCACGGTATTACTTGCATGATACCTTGTCCGTCGGGTTCTTATTGTCCCCTGGCAACCCTGGACAAAACAACTGGTGTTTGTGAACCATACAAATACCAACTACCTCCAGGGAAACCGAACCATACTTGTGGAGGAGCAAACATATGGGCTGACGTTGGTACTAGTAGTGAAGTATTTTGTCCAGTTGGATCATACTGTCCAACAACTGTGAAAAAAATTCCTTGCAGTAGTGGACACTACTGCAGGATGGGTTCTACCTCTGAGAAACGCTGCTTTAAGCTGACTTCATGTAATCAAAGCACTCCAAGTCAAAATAATTATGCATACGGAATAATGCTTATTGCAGCTCTGAGTACTCTTCTACTTATTTTTTACAATTTTTCCTACCAAGTTCTCACCACTAGGAACAGGACACTGGACAAATCCCGGGAAGCGGCAGCAAAAAATGCAAGGAAGGTAGCAAATTCATGGAAATATGCTGCAGATGCTGCAAAGAATTTTGCAAGCGGATTGCCAGCTCATTTATCACCTAAGTTTTCTCGAAAAAAGGACGTCCCAGGTGCACCTCTGCATCCAAGTGCATTCTCTGCTTCTTTGTCCTCACCTGTGCCATCTAAAGGAAAGCAAAAGGAATCTGGTGAGCTCATCCAGATGAGTGAAACTGAAGACAATCCAGAGAGTTTTGAACGGTTTATCTTTGGATCTGAGGATAAAATTGTAGGAAATGTGTCAAGTGGAAAACTAACACATACTCATAGCCAGATATGCAAGTACACTTATGCTCAACTTGAGAAAGAGAAGGCTCAGCAGCAAGACTATGAGGACTTTACCTTACCTGGGGTCGTTGAAATCGCCAATAATATTGAGACTAGGAAAAGGCCTCTAATCGAGATTTCTTTTAAAGACCTTACACTTACTTTGAAAGCGCAAAACAAACATCTATTGAGATGTGTAAGTGGTAAAATAAAGCCTGGTTGCATTACTGCAGTCATGGGTCCGTCAGGTGCTGGAAAAACAACATTTGTTTCTGCTCTAGCTGGAAAAGCAATTGGATGCAAGGTGACTGGTCTAATTCTTATAAATGGAAAGAATGAACCAATCCATTCGTATAAAAGAATCATAGGTTTTGTGCCGCAAGATGATACTGTGCACGGAAACTTGACAGTGGAAGAGAATTTGTGGTTCAGTGCAAAGTGCAGATTGTCAGTGGACTTATCAAAAGCAGATGAATTTCTAGTGACTGAAAGAGTTATTGAGTCCTTGGGCCTAAAGACAGTACGCAATTCCTTGGTTGGAACTGTAGAGAAGCGAGGAATTTCTGGAGGAGAGAGGAAACGTGTGAATGTTGGCATGGAAATGGTTATGGAACCTTCACTTTTGATTTTGGATGAACCCACATCAGGGTTGGACAGTGCCTCTTCTCAGCTACTTCTTGGAGCACTTAGATGGGAAGCTTTTGAAGGGGTAAACATTTGCATGGTGGTTCACCAACCTAGTAATGCATTATTCAAGAAGTTTGACGATCTGGTACTCCTGGCAAAAGGGGGCCTTACTGTCTATCATGGATCAGCAGAGAAAGTTGAAGAATACTTGGCAGGCCTTGGGGTCAATGTCCCAGACCGGATCAATCCTCCGGACTACTTTATTGACATTTTGGAGGGAATAGTAACAACAGAACGCAGCTCAAGTGTATACTATAAAGAGCTTCCTATCAGATGGATGCTTCATAAGGGGTACTCAGTACCCCCTGATATGTGGCACAGTACTGCTGGACTTGCATCGTCCTCAACTGGTGGAAATTCAATTGATGAAACAAATATTGCTGCTGCTGAAATGGAGGAACCATCTGTTTCAGCAAGTCTATGGAAATACATAAAAACTAATGTGATATTGCATTGTGATTCAATACGGCTCAATTTCTTGAAATCCAAGGATTTATCAAACCGGAGAACTCCAGGAGTTCTTCAGCAATACAAATACTTCCTCTGCAGAGTTGGTAAGCAGAGACTTCGAGAAGCTCGAATACAAGTAGTGGATTATTTAATTTTACTACTCGCTGGAGCCTGCTTAGGATCACTTGCTAAAGTGAGCGACCATAATTTTGGAGCACTTGGTTACACATATACCATTATTGCAGTTTCTCTACTGTGTAAAATTGCGGCTTTGAGATCATTTTCTCTGGATAGATTACACTATTGGAGAGAAGCTGCATCTGGAATGAGCAGCTTGGCTTATTTTCTCGCTAAGGATACAGTCGATCATTTTAATACAGTGATCAAACCTTTGGTGTATCTGTCCATGTTCTACTTTTTCACCGACCCAAGATCTAGCTTAGCGGATAATTACATTGTTCTACTCTGCCTTGTGTACTGCGTAACTGGTATAGCCTATGCACTAGCAATCTTCTTTGACCAAGGTGCAGCCCAACTGTTGTCAGTCCTTCTTCCTGTTGTTTTGACTCTTACAGCAACACAGCCTCAGGATAGTGAAATTCTAAAGATTTTGGCCAATTTATGCTATCCTAAGTGGGCTTTGGAGGCATTTGTGATTGCAAATGCTGAAAGCTACTCAGGGGTATGGCTAATAACTCGTTGCGGGACGCTTTTGAAAAGTGGCTATGATCTTCATGATTGGAATCTTTGTATAACTGTCTTGATCATCACTGGTTTAGTTAGTCGTGCGATTGCATTCTTTTGTATGCTGATCTTTCAGAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1107

Amino Acids

122.07

Weight (kDa)

7.88

Isoelectric Point (pI)

39.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 519 - 669 2.6e-23 ABC transporter
ABC2_membrane_7 PF19055 698 - 1107 2.5e-216 ABC-2 type transporter
ABC2_membrane PF01061 858 - 1052 1.7e-08 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011436)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1685
AatII GACGTC 2 cut(s) 27, 1161
Acc16I TGCGCA 1 cut(s) 75
AccI GTMKAC 1 cut(s) 2298
AccIII TCCGGA 1 cut(s) 2239
AciI CCGC 9 cut(s) 205, 386, 605, 1040, 1113, 1739, 2765, 2942, 3201
AclWI GGATC 6 cut(s) 246, 802, 1315, 2179, 2237, 2686
AcoI YGGCCR 3 cut(s) 202, 514, 3111
AcuI CTGAAG 2 cut(s) 1290, 2555
AcyI GRCGYC 2 cut(s) 24, 1158
AfiI CCNNNNNNNGG 5 cut(s) 1039, 1223, 1443, 2006, 2007
AflIII ACRYGT 1 cut(s) 1942
AhlI ACTAGT 1 cut(s) 767
AjnI CCWGG 9 cut(s) 493, 654, 663, 712, 1162, 1441, 1576, 2139, 2560
AjuI GAANNNNNNNTTGG 2 cut(s) 308, 340
Alw21I GWGCWC 5 cut(s) 1171, 1251, 1758, 2047, 2716
Alw26I GTCTC 3 cut(s) 87, 1466, 2605
Alw44I GTGCAC 2 cut(s) 1167, 1754
AlwI GGATC 6 cut(s) 246, 802, 1315, 2179, 2237, 2686
AlwNI CAGNNNCTG 3 cut(s) 261, 1094, 1613
Ama87I CYCGRG 1 cut(s) 1032
Aor13HI TCCGGA 1 cut(s) 2239
AoxI GGCC 8 cut(s) 41, 202, 514, 1484, 1870, 2152, 2203, 3111
ApaLI GTGCAC 2 cut(s) 1167, 1754
ArsI GACNNNNNNTTYG 2 cut(s) 2690, 2722
AspLEI GCGC 3 cut(s) 76, 434, 1534
AspS9I GGNCC 3 cut(s) 1601, 1870, 2152
AsuC2I CCSGG 3 cut(s) 275, 1033, 1034
AsuHPI GGTGA 7 cut(s) 994, 1125, 1200, 1256, 1678, 2084, 2911
AvaI CYCGRG 1 cut(s) 1032
AvaII GGWCC 1 cut(s) 1601
AxyI CCTNAGG 1 cut(s) 3084
BaeGI GKGCMC 2 cut(s) 1171, 1758
BalI TGGCCA 2 cut(s) 516, 3113
BanII GRGCYC 1 cut(s) 1251
BarI GAAGNNNNNNTAC 2 cut(s) 2613, 2645
BbsI GAAGAC 1 cut(s) 1278
Bbv12I GWGCWC 5 cut(s) 1171, 1251, 1758, 2047, 2716
BccI CCATC 6 cut(s) 492, 847, 1225, 2046, 2316, 2458
BceAI ACGGC 1 cut(s) 2531
BcgI CGANNNNNNTGC 4 cut(s) 539, 573, 2597, 2631
BciT130I CCWGG 9 cut(s) 495, 656, 665, 714, 1164, 1443, 1578, 2141, 2562
BciVI GTATCC 1 cut(s) 2848
BclI TGATCA 2 cut(s) 2880, 3261
BcnI CCSGG 3 cut(s) 275, 1033, 1034
BcoDI GTCTC 3 cut(s) 87, 1466, 2605
BcuI ACTAGT 1 cut(s) 767
BfmI CTRYAG 5 cut(s) 847, 1086, 1590, 1905, 2593
BfuI GTATCC 1 cut(s) 2848
BglII AGATCT 1 cut(s) 2930
BlpI GCTNAGC 2 cut(s) 1410, 2938
BmcAI AGTACT 2 cut(s) 961, 2371
Bme18I GGWCC 1 cut(s) 1601
BmeT110I CYCGRG 1 cut(s) 1032
BmgT120I GGNCC 3 cut(s) 1601, 1870, 2152
BmiI GGNNCC 6 cut(s) 290, 1602, 1974, 2153, 2448, 2668
BmsI GCATC 7 cut(s) 216, 1081, 1186, 1649, 2316, 2393, 2825
BpiI GAAGAC 1 cut(s) 1278
BpmI CTGGAG 4 cut(s) 696, 1947, 2544, 2685
Bpu10I CCTNAGC 2 cut(s) 2674, 2850
Bpu1102I GCTNAGC 2 cut(s) 1410, 2938
BpuEI CTTGAG 2 cut(s) 1415, 2275
BpuMI CCSGG 3 cut(s) 275, 1033, 1034
BsaAI YACGTR 1 cut(s) 442
BsaBI GATNNNNATC 1 cut(s) 3240
BsaHI GRCGYC 2 cut(s) 24, 1158
BsaWI WCCGGW 3 cut(s) 2226, 2239, 2550
Bsc4I CCNNNNNNNGG 5 cut(s) 1039, 1223, 1443, 2006, 2007
Bse1I ACTGG 7 cut(s) 682, 788, 1026, 1675, 2401, 2989, 3274
Bse21I CCTNAGG 1 cut(s) 3084
Bse8I GATNNNNATC 1 cut(s) 3240
BseAI TCCGGA 1 cut(s) 2239
BseBI CCWGG 9 cut(s) 495, 656, 665, 714, 1164, 1443, 1578, 2141, 2562
BseGI GGATG 7 cut(s) 503, 858, 1177, 1251, 1664, 1999, 2331
BseJI GATNNNNATC 1 cut(s) 3240
BseLI CCNNNNNNNGG 5 cut(s) 1039, 1223, 1443, 2006, 2007
BseNI ACTGG 7 cut(s) 682, 788, 1026, 1675, 2401, 2989, 3274
BseRI GAGGAG 2 cut(s) 753, 1944
BseSI GKGCMC 2 cut(s) 1171, 1758
BsgI GTGCAG 2 cut(s) 1822, 3045
BshFI GGCC 8 cut(s) 43, 204, 516, 1486, 1872, 2154, 2205, 3113
BsiHKAI GWGCWC 5 cut(s) 1171, 1251, 1758, 2047, 2716
BsiHKCI CYCGRG 1 cut(s) 1032
BsiSI CCGG 5 cut(s) 275, 1033, 2227, 2240, 2551
BslFI GGGAC 5 cut(s) 144, 636, 1145, 2204, 3217
BslI CCNNNNNNNGG 5 cut(s) 1039, 1223, 1443, 2006, 2007
BsmAI GTCTC 3 cut(s) 87, 1466, 2605
BsmFI GGGAC 5 cut(s) 144, 636, 1145, 2204, 3217
BsmI GAATGC 3 cut(s) 339, 1187, 3293
BsnI GGCC 8 cut(s) 43, 204, 516, 1486, 1872, 2154, 2205, 3113
BsoBI CYCGRG 1 cut(s) 1032
Bsp1286I GDGCHC 5 cut(s) 1171, 1251, 1758, 2047, 2716
Bsp13I TCCGGA 1 cut(s) 2239
Bsp1407I TGTACA 1 cut(s) 377
Bsp1720I GCTNAGC 2 cut(s) 1410, 2938
BspACI CCGC 9 cut(s) 205, 386, 605, 1040, 1113, 1739, 2765, 2942, 3201
BspANI GGCC 8 cut(s) 43, 204, 516, 1486, 1872, 2154, 2205, 3113
BspEI TCCGGA 1 cut(s) 2239
BspHI TCATGA 1 cut(s) 3232
BspLI GGNNCC 6 cut(s) 290, 1602, 1974, 2153, 2448, 2668
BspMAI CTGCAG 4 cut(s) 851, 1090, 1594, 2597
BspPI GGATC 6 cut(s) 246, 802, 1315, 2179, 2237, 2686
BsrGI TGTACA 1 cut(s) 377
BsrI ACTGG 7 cut(s) 682, 788, 1026, 1675, 2401, 2989, 3274
BssNAI GTATAC 1 cut(s) 2299
BssNI GRCGYC 2 cut(s) 24, 1158
BssT1I CCWWGG 5 cut(s) 1866, 1893, 2206, 2535, 3019
Bst1107I GTATAC 1 cut(s) 2299
Bst2UI CCWGG 9 cut(s) 495, 656, 665, 714, 1164, 1443, 1578, 2141, 2562
Bst6I CTCTTC 3 cut(s) 969, 1770, 2029
BstACI GRCGYC 2 cut(s) 24, 1158
BstAPI GCANNNNNTGC 3 cut(s) 1052, 1094, 1193
BstAUI TGTACA 1 cut(s) 377
BstBAI YACGTR 1 cut(s) 442
BstC8I GCNNGC 6 cut(s) 297, 578, 1111, 1122, 2203, 2671
BstF5I GGATG 7 cut(s) 503, 858, 1177, 1251, 1664, 1999, 2331
BstHHI GCGC 3 cut(s) 76, 434, 1534
BstMAI GTCTC 3 cut(s) 87, 1466, 2605
BstNI CCWGG 9 cut(s) 495, 656, 665, 714, 1164, 1443, 1578, 2141, 2562
BstNSI RCATGY 1 cut(s) 530
BstSFI CTRYAG 5 cut(s) 847, 1086, 1590, 1905, 2593
BstSLI GKGCMC 2 cut(s) 1171, 1758
BstV2I GAAGAC 1 cut(s) 1278
BstX2I RGATCY 3 cut(s) 238, 1307, 2930
BstXI CCANNNNNNTGG 2 cut(s) 734, 2708
BstYI RGATCY 3 cut(s) 238, 1307, 2930
BstZ17I GTATAC 1 cut(s) 2299
Bsu36I CCTNAGG 1 cut(s) 3084
BsuI GTATCC 1 cut(s) 2848
BsuRI GGCC 8 cut(s) 43, 204, 516, 1486, 1872, 2154, 2205, 3113
BtsCI GGATG 7 cut(s) 503, 858, 1177, 1251, 1664, 1999, 2331
BtsI GCAGTG 2 cut(s) 53, 365
BtsIMutI CAGTG 9 cut(s) 53, 365, 1019, 1776, 1798, 1818, 2023, 2883, 3267
Cac8I GCNNGC 6 cut(s) 297, 578, 1111, 1122, 2203, 2671
CaiI CAGNNNCTG 3 cut(s) 261, 1094, 1613
CciI TCATGA 1 cut(s) 3232
CfoI GCGC 3 cut(s) 76, 434, 1534
Cfr13I GGNCC 3 cut(s) 1601, 1870, 2152
Cfr9I CCCGGG 1 cut(s) 1032
CseI GACGC 1 cut(s) 3214
DraI TTTAAA 1 cut(s) 1507
EaeI YGGCCR 3 cut(s) 202, 514, 3111
Eam1104I CTCTTC 3 cut(s) 969, 1770, 2029
EarI CTCTTC 3 cut(s) 969, 1770, 2029
Ecl136II GAGCTC 1 cut(s) 1249
Eco130I CCWWGG 5 cut(s) 1866, 1893, 2206, 2535, 3019
Eco147I AGGCCT 3 cut(s) 43, 1486, 2205
Eco24I GRGCYC 1 cut(s) 1251
Eco47I GGWCC 1 cut(s) 1601
Eco53kI GAGCTC 1 cut(s) 1249
Eco57I CTGAAG 2 cut(s) 1290, 2555
Eco81I CCTNAGG 1 cut(s) 3084
Eco88I CYCGRG 1 cut(s) 1032
EcoICRI GAGCTC 1 cut(s) 1249
EcoO109I RGGNCCY 1 cut(s) 2152
EcoRII CCWGG 9 cut(s) 493, 654, 663, 712, 1162, 1441, 1576, 2139, 2560
EcoT14I CCWWGG 5 cut(s) 1866, 1893, 2206, 2535, 3019
EcoT22I ATGCAT 3 cut(s) 341, 931, 2110
EcoT38I GRGCYC 1 cut(s) 1251
ErhI CCWWGG 5 cut(s) 1866, 1893, 2206, 2535, 3019
FalI AAGNNNNNCTT 2 cut(s) 2139, 2171
FaqI GGGAC 5 cut(s) 144, 636, 1145, 2204, 3217
FauI CCCGC 1 cut(s) 3194
FauNDI CATATG 1 cut(s) 749
FbaI TGATCA 2 cut(s) 2880, 3261
FblI GTMKAC 1 cut(s) 2298
FokI GGATG 7 cut(s) 510, 865, 1164, 1238, 1671, 2006, 2338
FriOI GRGCYC 1 cut(s) 1251
FspI TGCGCA 1 cut(s) 75
GlaI GCGC 3 cut(s) 75, 433, 1533
GsuI CTGGAG 4 cut(s) 696, 1947, 2544, 2685
HaeIII GGCC 8 cut(s) 43, 204, 516, 1486, 1872, 2154, 2205, 3113
HapII CCGG 5 cut(s) 275, 1033, 2227, 2240, 2551
HgaI GACGC 1 cut(s) 3214
HhaI GCGC 3 cut(s) 76, 434, 1534
Hin1I GRCGYC 2 cut(s) 24, 1158
Hin6I GCGC 3 cut(s) 74, 432, 1532
HinP1I GCGC 3 cut(s) 74, 432, 1532
HincII GTYRAC 2 cut(s) 28, 532
HindII GTYRAC 2 cut(s) 28, 532
HindIII AAGCTT 1 cut(s) 2058
HinfI GANTC 8 cut(s) 332, 520, 1238, 1722, 1862, 2507, 3064, 3241
HpaII CCGG 5 cut(s) 275, 1033, 2227, 2240, 2551
HphI GGTGA 7 cut(s) 994, 1125, 1200, 1256, 1678, 2084, 2911
Hpy188I TCNGA 7 cut(s) 427, 547, 868, 957, 1312, 2321, 3318
Hpy99I CGWCG 1 cut(s) 640
HpyAV CCTTC 6 cut(s) 545, 1054, 1399, 1986, 2060, 3056
HpyCH4IV ACGT 5 cut(s) 24, 441, 759, 1158, 1942
HpySE526I ACGT 5 cut(s) 24, 441, 759, 1158, 1942
Hsp92I GRCGYC 2 cut(s) 24, 1158
HspAI GCGC 3 cut(s) 74, 432, 1532
Kpn2I TCCGGA 1 cut(s) 2239
Ksp22I TGATCA 2 cut(s) 2880, 3261
LmnI GCTCC 4 cut(s) 740, 2042, 2666, 2711
LweI GCATC 7 cut(s) 216, 1081, 1186, 1649, 2316, 2393, 2825
MaeII ACGT 5 cut(s) 24, 441, 759, 1158, 1942
MaeIII GTNAC 7 cut(s) 20, 587, 1666, 1843, 2272, 2720, 2980
MfeI CAATTG 2 cut(s) 1653, 2409
MflI RGATCY 3 cut(s) 238, 1307, 2930
MhlI GDGCHC 5 cut(s) 1171, 1251, 1758, 2047, 2716
MlsI TGGCCA 2 cut(s) 516, 3113
MluNI TGGCCA 2 cut(s) 516, 3113
MlyI GAGTC 2 cut(s) 1871, 3058
MmeI TCCRAC 4 cut(s) 772, 830, 1879, 1992
Mox20I TGGCCA 2 cut(s) 516, 3113
Mph1103I ATGCAT 3 cut(s) 341, 931, 2110
MroI TCCGGA 1 cut(s) 2239
MscI TGGCCA 2 cut(s) 516, 3113
MseI TTAA 5 cut(s) 303, 882, 1506, 2648, 2871
MslI CAYNNNNRTG 6 cut(s) 732, 1182, 1256, 1961, 2050, 2081
Msp20I TGGCCA 2 cut(s) 516, 3113
MspA1I CMGCKG 2 cut(s) 295, 386
MspI CCGG 5 cut(s) 275, 1033, 2227, 2240, 2551
MunI CAATTG 2 cut(s) 1653, 2409
Mva1269I GAATGC 3 cut(s) 339, 1187, 3293
MvaI CCWGG 9 cut(s) 495, 656, 665, 714, 1164, 1443, 1578, 2141, 2562
NciI CCSGG 3 cut(s) 275, 1033, 1034
NdeI CATATG 1 cut(s) 749
NlaIV GGNNCC 6 cut(s) 290, 1602, 1974, 2153, 2448, 2668
NmuCI GTSAC 4 cut(s) 20, 587, 1666, 1843
NsbI TGCGCA 1 cut(s) 75
NsiI ATGCAT 3 cut(s) 341, 931, 2110
NspI RCATGY 1 cut(s) 530
PagI TCATGA 1 cut(s) 3232
PceI AGGCCT 3 cut(s) 43, 1486, 2205
PcsI WCGNNNNNNNCGW 1 cut(s) 2623
PctI GAATGC 3 cut(s) 339, 1187, 3293
PfeI GAWTC 6 cut(s) 332, 520, 1238, 1722, 2507, 3241
PfoI TCCNGGA 1 cut(s) 2560
PleI GAGTC 2 cut(s) 1870, 3058
PpsI GAGTC 2 cut(s) 1870, 3058
Ppu21I YACGTR 1 cut(s) 442
PsiI TTATAA 1 cut(s) 1685
Psp124BI GAGCTC 1 cut(s) 1251
Psp6I CCWGG 9 cut(s) 493, 654, 663, 712, 1162, 1441, 1576, 2139, 2560
PspGI CCWGG 9 cut(s) 493, 654, 663, 712, 1162, 1441, 1576, 2139, 2560
PspN4I GGNNCC 6 cut(s) 290, 1602, 1974, 2153, 2448, 2668
PspPI GGNCC 3 cut(s) 1601, 1870, 2152
PstI CTGCAG 4 cut(s) 851, 1090, 1594, 2597
PstNI CAGNNNCTG 3 cut(s) 261, 1094, 1613
PsuI RGATCY 3 cut(s) 238, 1307, 2930
PvuII CAGCTG 1 cut(s) 295
RseI CAYNNNNRTG 6 cut(s) 732, 1182, 1256, 1961, 2050, 2081
SacI GAGCTC 1 cut(s) 1251
SaqAI TTAA 5 cut(s) 303, 882, 1506, 2648, 2871
Sau96I GGNCC 3 cut(s) 1601, 1870, 2152
ScaI AGTACT 2 cut(s) 961, 2371
SchI GAGTC 2 cut(s) 1871, 3058
SduI GDGCHC 5 cut(s) 1171, 1251, 1758, 2047, 2716
SfaNI GCATC 7 cut(s) 216, 1081, 1186, 1649, 2316, 2393, 2825
SfcI CTRYAG 5 cut(s) 847, 1086, 1590, 1905, 2593
SinI GGWCC 1 cut(s) 1601
SmaI CCCGGG 1 cut(s) 1034
SmiMI CAYNNNNRTG 6 cut(s) 732, 1182, 1256, 1961, 2050, 2081
SmlI CTYRAG 2 cut(s) 1394, 2290
SmoI CTYRAG 2 cut(s) 1394, 2290
SpeI ACTAGT 1 cut(s) 767
SseBI AGGCCT 3 cut(s) 43, 1486, 2205
SsiI CCGC 9 cut(s) 205, 386, 605, 1040, 1113, 1739, 2765, 2942, 3201
SspI AATATT 2 cut(s) 1468, 2425
SstI GAGCTC 1 cut(s) 1251
StuI AGGCCT 3 cut(s) 43, 1486, 2205
StyI CCWWGG 5 cut(s) 1866, 1893, 2206, 2535, 3019
TaiI ACGT 5 cut(s) 27, 444, 762, 1161, 1945
TaqI TCGA 5 cut(s) 1147, 1494, 2617, 2626, 2862
TatI WGTACW 5 cut(s) 377, 959, 1377, 2369, 2973
TauI GCSGC 4 cut(s) 207, 1043, 1741, 2768
TfiI GAWTC 6 cut(s) 332, 520, 1238, 1722, 2507, 3241
Tru1I TTAA 5 cut(s) 303, 882, 1506, 2648, 2871
Tru9I TTAA 5 cut(s) 303, 882, 1506, 2648, 2871
TscAI CASTG 9 cut(s) 60, 372, 1026, 1776, 1798, 1818, 2023, 2883, 3274
TseFI GTSAC 4 cut(s) 20, 587, 1666, 1843
Tsp45I GTSAC 4 cut(s) 20, 587, 1666, 1843
TspGWI ACGGA 4 cut(s) 624, 948, 1593, 1773
TspMI CCCGGG 1 cut(s) 1032
TspRI CASTG 9 cut(s) 60, 372, 1026, 1776, 1798, 1818, 2023, 2883, 3274
VneI GTGCAC 2 cut(s) 1167, 1754
VpaK11BI GGWCC 1 cut(s) 1601
XceI RCATGY 1 cut(s) 530
XcmI CCANNNNNNNNNTGG 1 cut(s) 2008
XmaI CCCGGG 1 cut(s) 1032
XmiI GTMKAC 1 cut(s) 2298
ZraI GACGTC 2 cut(s) 25, 1159
ZrmI AGTACT 2 cut(s) 961, 2371
Zsp2I ATGCAT 3 cut(s) 341, 931, 2110
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.