CS domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G03773 AT3G03773 AT3G03773 |
| fragaria_vesca | FvH4_1g28480 |
| malus_domestica | MD12G1008700.v1.1 |
| prunus_persica | Prupe.7G010500_v2.0.a1 |
| pyrus_communis | pycom12g00650 |
| rosa_chinensis | RchiOBHm_Chr3g0496351 |
| rosa_laevigata | RLG00000022529 |
| rosa_multiflora | Rmu_co8304491.1_g000001 Rmu_sc0002461.1_g000005 |
| rosa_roxburghii | Rroxscaffold_6G00389260 |
| rosa_rugosa | Rorug03G0281700 Rorug03G0281800 Rorug03G0281900 |
| rosa_samantha | Rh3AG328500 Rh3BG364600 Rh3CG361600 Rh3DG364600 |
| rosa_wichuraiana | Rw3G028760 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 173 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 215 |
| AgsI | TTSAA | 1 cut(s) | 204 |
| AluBI | AGCT | 2 cut(s) | 193, 401 |
| AluI | AGCT | 2 cut(s) | 193, 401 |
| AoxI | GGCC | 1 cut(s) | 261 |
| ApeKI | GCWGC | 2 cut(s) | 253, 401 |
| AsuHPI | GGTGA | 2 cut(s) | 331, 361 |
| BbvI | GCAGC | 2 cut(s) | 240, 388 |
| BccI | CCATC | 1 cut(s) | 221 |
| BclI | TGATCA | 1 cut(s) | 163 |
| BfaI | CTAG | 2 cut(s) | 21, 415 |
| BisI | GCNGC | 2 cut(s) | 254, 402 |
| BlsI | GCNGC | 2 cut(s) | 255, 403 |
| BmiI | GGNNCC | 1 cut(s) | 57 |
| BpmI | CTGGAG | 2 cut(s) | 86, 278 |
| BsaJI | CCNNGG | 2 cut(s) | 107, 150 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 215 |
| BseDI | CCNNGG | 2 cut(s) | 107, 150 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 215 |
| BseXI | GCAGC | 2 cut(s) | 240, 388 |
| BshFI | GGCC | 1 cut(s) | 263 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 215 |
| BsnI | GGCC | 1 cut(s) | 263 |
| Bsp143I | GATC | 1 cut(s) | 163 |
| BspANI | GGCC | 1 cut(s) | 263 |
| BspLI | GGNNCC | 1 cut(s) | 57 |
| BssECI | CCNNGG | 2 cut(s) | 107, 150 |
| BssMI | GATC | 1 cut(s) | 163 |
| BssT1I | CCWWGG | 2 cut(s) | 107, 150 |
| Bst4CI | ACNGT | 1 cut(s) | 243 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 244, 253 |
| BstC8I | GCNNGC | 1 cut(s) | 185 |
| BstDEI | CTNAG | 1 cut(s) | 308 |
| BstKTI | GATC | 1 cut(s) | 166 |
| BstMBI | GATC | 1 cut(s) | 163 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 220, 244, 253, 302, 311, 401 |
| BstV1I | GCAGC | 2 cut(s) | 240, 388 |
| BsuRI | GGCC | 1 cut(s) | 263 |
| BtsI | GCAGTG | 1 cut(s) | 321 |
| BtsIMutI | CAGTG | 1 cut(s) | 321 |
| Cac8I | GCNNGC | 1 cut(s) | 185 |
| CviAII | CATG | 3 cut(s) | 179, 224, 374 |
| CviJI | RGCY | 8 cut(s) | 183, 187, 193, 263, 355, 363, 395, 401 |
| CviKI_1 | RGCY | 8 cut(s) | 183, 187, 193, 263, 355, 363, 395, 401 |
| DdeI | CTNAG | 1 cut(s) | 308 |
| DpnI | GATC | 1 cut(s) | 165 |
| DpnII | GATC | 1 cut(s) | 163 |
| Eco130I | CCWWGG | 2 cut(s) | 107, 150 |
| Eco147I | AGGCCT | 1 cut(s) | 263 |
| Eco32I | GATATC | 1 cut(s) | 198 |
| Eco57I | CTGAAG | 1 cut(s) | 173 |
| EcoRV | GATATC | 1 cut(s) | 198 |
| EcoT14I | CCWWGG | 2 cut(s) | 107, 150 |
| ErhI | CCWWGG | 2 cut(s) | 107, 150 |
| FaeI | CATG | 3 cut(s) | 182, 227, 377 |
| FaiI | YATR | 5 cut(s) | 180, 225, 351, 366, 375 |
| FatI | CATG | 3 cut(s) | 178, 223, 373 |
| FbaI | TGATCA | 1 cut(s) | 163 |
| Fnu4HI | GCNGC | 2 cut(s) | 254, 402 |
| Fsp4HI | GCNGC | 2 cut(s) | 254, 402 |
| FspBI | CTAG | 2 cut(s) | 21, 415 |
| GluI | GCNGC | 2 cut(s) | 254, 402 |
| GsuI | CTGGAG | 2 cut(s) | 86, 278 |
| HaeIII | GGCC | 1 cut(s) | 263 |
| Hin1II | CATG | 3 cut(s) | 182, 227, 377 |
| HinfI | GANTC | 2 cut(s) | 103, 146 |
| HphI | GGTGA | 2 cut(s) | 331, 361 |
| Hpy188I | TCNGA | 3 cut(s) | 133, 163, 392 |
| Hpy188III | TCNNGA | 3 cut(s) | 65, 124, 167 |
| HpyCH4III | ACNGT | 1 cut(s) | 243 |
| HpyCH4IV | ACGT | 1 cut(s) | 278 |
| HpyCH4V | TGCA | 5 cut(s) | 4, 223, 238, 247, 404 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 220, 244, 253, 302, 311, 401 |
| HpyF3I | CTNAG | 1 cut(s) | 308 |
| HpySE526I | ACGT | 1 cut(s) | 278 |
| Hsp92II | CATG | 3 cut(s) | 182, 227, 377 |
| Ksp22I | TGATCA | 1 cut(s) | 163 |
| Kzo9I | GATC | 1 cut(s) | 163 |
| LpnPI | CCDG | 3 cut(s) | 50, 169, 242 |
| Lsp1109I | GCAGC | 2 cut(s) | 240, 388 |
| MaeI | CTAG | 2 cut(s) | 21, 415 |
| MaeII | ACGT | 1 cut(s) | 278 |
| MaeIII | GTNAC | 1 cut(s) | 367 |
| MalI | GATC | 1 cut(s) | 165 |
| MboI | GATC | 1 cut(s) | 163 |
| MboII | GAAGA | 4 cut(s) | 112, 155, 192, 302 |
| MfeI | CAATTG | 1 cut(s) | 248 |
| MluCI | AATT | 1 cut(s) | 248 |
| MmeI | TCCRAC | 1 cut(s) | 83 |
| MnlI | CCTC | 6 cut(s) | 139, 182, 253, 274, 351, 392 |
| MseI | TTAA | 2 cut(s) | 90, 357 |
| MspA1I | CMGCKG | 1 cut(s) | 193 |
| MunI | CAATTG | 1 cut(s) | 248 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 220, 244, 253, 302, 311, 401 |
| NdeII | GATC | 1 cut(s) | 163 |
| NlaIII | CATG | 3 cut(s) | 182, 227, 377 |
| NlaIV | GGNNCC | 1 cut(s) | 57 |
| NmuCI | GTSAC | 1 cut(s) | 367 |
| PceI | AGGCCT | 1 cut(s) | 263 |
| PfeI | GAWTC | 2 cut(s) | 103, 146 |
| PkrI | GCNGC | 2 cut(s) | 255, 403 |
| PspN4I | GGNNCC | 1 cut(s) | 57 |
| PvuII | CAGCTG | 1 cut(s) | 193 |
| SaqAI | TTAA | 2 cut(s) | 90, 357 |
| SatI | GCNGC | 2 cut(s) | 254, 402 |
| Sau3AI | GATC | 1 cut(s) | 163 |
| SetI | ASST | 6 cut(s) | 131, 174, 195, 281, 384, 403 |
| Sse9I | AATT | 1 cut(s) | 248 |
| SseBI | AGGCCT | 1 cut(s) | 263 |
| SspMI | CTAG | 2 cut(s) | 21, 415 |
| StuI | AGGCCT | 1 cut(s) | 263 |
| StyI | CCWWGG | 2 cut(s) | 107, 150 |
| TaaI | ACNGT | 1 cut(s) | 243 |
| TaiI | ACGT | 1 cut(s) | 281 |
| TasI | AATT | 1 cut(s) | 248 |
| TfiI | GAWTC | 2 cut(s) | 103, 146 |
| Tru1I | TTAA | 2 cut(s) | 90, 357 |
| Tru9I | TTAA | 2 cut(s) | 90, 357 |
| TscAI | CASTG | 1 cut(s) | 321 |
| TseFI | GTSAC | 1 cut(s) | 367 |
| TseI | GCWGC | 2 cut(s) | 253, 401 |
| Tsp45I | GTSAC | 1 cut(s) | 367 |
| TspDTI | ATGAA | 3 cut(s) | 113, 156, 338 |
| TspRI | CASTG | 1 cut(s) | 321 |
| XspI | CTAG | 2 cut(s) | 21, 415 |