Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0005740

Physical Location & Seq

Genomic Coordinates Reverse (-)

29360552 .. 29362825

Gene Structure 2274 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0289000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2061 bp

ATGCTTCGTCATCTTGTACCCTATAAAACCTGGAGAATGTCCCTAACAACAACACCGACTCATCTTCCACTCTCTCTCACTCTCACAAAATCCACTCTATCGAAAATGGAGCCCAAGGGCACTCTCATCTTCTCCACCGTTGGCCGACCCCACTACGGCTTCGACCTATTCTCCCTCCGCCTCAGCTCCTCCCATCTCCCCCTCGAACACCGCCTCACCGACGGCAAATCCATCAACTTCAACGCCCAATTCGCCCGCGACGACGACCAGTCCATCGTCTTCATCTCCGAACGAACCGGGTCGCCCGCCATTTACTTAACCCGACCCGGAATCCCAAACCCCCGACTGCTGCATTCCGTGCCCGGAAGCCTCTTCCACGACCGGCCCATCATCAAGGACGGCAAGCTCTACTTCATCTCAGCTCACGAACAGCCCGACCGGCTTTTCAAGAGCTGGTCTGCTCTCTACTCCACTGAGCTTGATGGTGAGAACCAAAAGAAGAAGACCACCCGGTTGACTCCGCCCGGGTCTGTCGATTACAGTCCGGCCGTTTCTCTCTCCGGCGAGTTCGTCGCCGTCGCTTCGTACGGCTCTCGTCCCTGGGACGGCGAGTTTCACCAGCTCAACACCGACATCGTCGTCTTCCGAGCTTCACAGCCCGGAGAGCGTGTGGTGGTCTGTGAGCGCGGCGGGTGGCCCACCTGGTCCGGCGACTCCGTCATCTACTTTCATCGCCAAGACGACGACGGCTGGTGGGCCATTTTCCGAATTGATTTCCCCCACGATTTCGAATCCTCTGCATACCCGTTGACTCCCACTCGGGTCACTCCGTCGGGTCTCCACTGCTTCACTCCGGCCGCCATGCACGACGGAAGACGAATCGCCATCGCCACTCGCCGCCGCGACACGAAGTTCCGACACGTGGAGGTCTTCGACGTCGACACGAAGACGTTCCGTCCGGTCACCTCGACGCTGAACCCGGATTTCCACCATTACAACCCGTTCGTTTCCCCGGACTCCGAGTTCCTCGGGTACCACCGGTTCCGCGGCGAGTCGACTCAGTGGGGCGGCGAGTCGATCATTCCTCACCTGGAGCCGGTGTCGTCTCCCGTCACACATCTCCAAATGCTGAGGCTTCACGGCTTCTTCCCGACCTTCTCTCCCGACGCCGATCTCGTCGCCTTTAATCCCGATTTCCAAGGAAACCCCGGCGTCAAAATCGTCAGGTCCGACGGGTCAAAGTGTTGGACTTTAATCAAAGGCCGCACGGCCTTCTACAACTGCTGGAGCCCCACAGAGAGACACGTCATATACACATCCATAGGCGGAATCTTCCAGTCAGCAAAGACAACGGTCCAGATTGCGCGAATAGAGTTTGACCCGTCTGATCTGAACGGTGATAAGGACGTCCCATGCAACGTTAAGATCCTCACTCGCGAAGACACAGGGAATAACGCCTTCGCTTCCTGCTCCCCAGACGGCAAGTCGCTCGTGTTCCGGTCCGGTCGGACAGGCCACAAGAACCTCTACATTGTCGACGCCGTTAACGGCGAGTTTAACGGCGGAATCCGTCGGTTGACGGAGGGGCCGTGTATTGATACCATGCCGAGCTGGTCGCCCAGAGGAGACCTCATCGCCTTCTCTTCGAACCGGCACAAACCGGACGATGATGCTGTGTTCAGCATTTACGTCATCAACCCGGACGGCTCGGGGTTGCGGAGGATCCACGTGGCGGGGGATGACGTGGACAGGGAGAGGATCAACCACGTGTGCTTTAGTAGAGACGGGGAGTGGCTGCTGTTCACGGCTAACTTGGACGGCGTGACGGCTGAGCCGGTGTCGTTTCCGAACCAGTTTCAGCCGTACGGGGATTTGTACGTGGTGAGATTGGACGGGAGTGGGTTGAGGAGGCTGACGTGGAATGGGTATGAGAATGGCACGCCGACGTGGCACACGGGTGATGAGCTGGACTTGGGGCGGCTGCGTTTGGGTCCTTCCGAAGCTGGAGATAAACTCAAGGGTCAATTTGACGAACCTCTTTGGATTTCTTGTGACATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF2470 Putative_PNPOx Pyrid_oxidase_2

Protein Analysis

686

Amino Acids

77.12

Weight (kDa)

6.44

Isoelectric Point (pI)

37.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Tricorn_N	PF26549	481 - 574	6e-10	Tricorn protease N-terminal beta propeller domain
PD40	PF07676	524 - 564	7.5e-06	WD40-like Beta Propeller Repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005740)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03890 AT3G03890
fragaria_vesca	FvH4_1g28200 FvH4_1g28200 FvH4_1g28200 FvH4_1g28200
malus_domestica	MD12G1004000.v1.1 MD12G1004200.v1.1 MD14G1002900.v1.1
prunus_persica	Prupe.7G004600_v2.0.a1 Prupe.7G004600_v2.0.a1 Prupe.7G004600_v2.0.a1
pyrus_communis	pycom12g00350 pycom14g00080
rosa_chinensis	RchiOBHm_Chr3g0497041
rosa_laevigata	RLG00000022486
rosa_multiflora	Rmu_sc0008737.1_g000002 Rmu_sc0009312.1_g000002 Rmu_sc0035985.1_g000001 Rmu_sc0036941.1_g000001
rosa_roxburghii	Rroxscaffold_6G00388440
rosa_rugosa	Rorug03G0289000 Rorug03G0289100
rosa_samantha	Rh3AG333400 Rh3BG370700 Rh3CG367400 Rh3DG368700
rosa_wichuraiana	Rw3G029290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	638
AatII	GACGTC	2 cut(s)	939, 1410
Acc65I	GGTACC	1 cut(s)	1032
AccB1I	GGYRCC	1 cut(s)	1032
AccI	GTMKAC	3 cut(s)	939, 1055, 1536
AccII	CGCG	6 cut(s)	258, 687, 903, 1047, 1366, 1437
AclI	AACGTT	1 cut(s)	1419
AclWI	GGATC	4 cut(s)	1420, 1717, 1730, 1766
AcoI	YGGCCR	3 cut(s)	142, 546, 855
AcvI	CACGTG	3 cut(s)	922, 1729, 1768
AcyI	GRCGYC	5 cut(s)	936, 1167, 1212, 1407, 1539
AfaI	GTAC	5 cut(s)	18, 587, 1034, 1865, 1877
AfiI	CCNNNNNNNGG	5 cut(s)	155, 605, 922, 1096, 1732
AflIII	ACRYGT	3 cut(s)	919, 1303, 1767
AgeI	ACCGGT	1 cut(s)	1038
AgsI	TTSAA	2 cut(s)	241, 448
AhdI	GACNNNNNGTC	3 cut(s)	268, 954, 1483
AjiI	CACGTC	4 cut(s)	1306, 1744, 1917, 1947
AjnI	CCWGG	4 cut(s)	29, 599, 701, 1089
AleI	CACNNNNGTG	1 cut(s)	1956
AloI	GAACNNNNNNTCC	2 cut(s)	1007, 1039
Alw26I	GTCTC	5 cut(s)	842, 1110, 1294, 1620, 1776
AlwI	GGATC	4 cut(s)	1420, 1717, 1730, 1766
Ama87I	CYCGRG	4 cut(s)	524, 819, 1028, 1708
ApeKI	GCWGC	3 cut(s)	349, 1795, 1981
AsiGI	ACCGGT	1 cut(s)	1038
Asp700I	GAANNNNTTC	1 cut(s)	950
Asp718I	GGTACC	1 cut(s)	1032
AspLEI	GCGC	2 cut(s)	687, 1366
AspS9I	GGNCC	9 cut(s)	384, 696, 705, 756, 1227, 1354, 1500, 1586, 1991
AsuHPI	GGTGA	8 cut(s)	208, 497, 608, 955, 1079, 1409, 1894, 1970
AsuII	TTCGAA	2 cut(s)	789, 1646
AvaI	CYCGRG	4 cut(s)	524, 819, 1028, 1708
AvaII	GGWCC	5 cut(s)	705, 1227, 1354, 1500, 1991
BaeGI	GKGCMC	2 cut(s)	122, 363
BamHI	GGATCC	1 cut(s)	1722
BanI	GGYRCC	1 cut(s)	1032
BanII	GRGCYC	2 cut(s)	114, 1292
BauI	CACGAG	1 cut(s)	1490
BbrPI	CACGTG	3 cut(s)	922, 1729, 1768
BbsI	GAAGAC	7 cut(s)	271, 509, 634, 880, 922, 953, 1446
BbvCI	CCTCAGC	2 cut(s)	182, 1130
BbvI	GCAGC	3 cut(s)	336, 1782, 1968
BccI	CCATC	6 cut(s)	201, 239, 281, 395, 476, 893
BcgI	CGANNNNNNTGC	4 cut(s)	779, 813, 1471, 1505
BciT130I	CCWGG	4 cut(s)	31, 601, 703, 1091
BcoDI	GTCTC	5 cut(s)	842, 1110, 1294, 1620, 1776
BglI	GCCNNNNNGGC	2 cut(s)	439, 1948
BlpI	GCTNAGC	1 cut(s)	1830
Bme18I	GGWCC	5 cut(s)	705, 1227, 1354, 1500, 1991
BmeRI	GACNNNNNGTC	3 cut(s)	268, 954, 1483
BmeT110I	CYCGRG	4 cut(s)	524, 819, 1028, 1708
BmgBI	CACGTC	4 cut(s)	1306, 1744, 1917, 1947
BmgT120I	GGNCC	9 cut(s)	384, 696, 705, 756, 1227, 1354, 1500, 1586, 1991
BmiI	GGNNCC	8 cut(s)	111, 1034, 1043, 1095, 1289, 1587, 1724, 1992
BmsI	GCATC	1 cut(s)	1660
BoxI	GACNNNNGTC	1 cut(s)	1352
BpiI	GAAGAC	7 cut(s)	271, 509, 634, 880, 922, 953, 1446
BplI	GAGNNNNNCTC	4 cut(s)	1614, 1646, 1998, 2030
BpmI	CTGGAG	4 cut(s)	52, 1112, 1306, 2025
Bpu10I	CCTNAGC	2 cut(s)	182, 1130
Bpu1102I	GCTNAGC	1 cut(s)	1830
Bpu14I	TTCGAA	2 cut(s)	789, 1646
BpuEI	CTTGAG	1 cut(s)	2000
BsaAI	YACGTR	4 cut(s)	922, 1729, 1768, 1879
BsaHI	GRCGYC	5 cut(s)	936, 1167, 1212, 1407, 1539
BsaI	GGTCTC	2 cut(s)	842, 1620
BsaJI	CCNNGG	9 cut(s)	114, 524, 599, 600, 1011, 1027, 1045, 1198, 1207
BsaWI	WCCGGW	5 cut(s)	958, 1038, 1497, 1502, 1660
Bsc4I	CCNNNNNNNGG	5 cut(s)	155, 605, 922, 1096, 1732
Bse118I	RCCGGY	6 cut(s)	381, 438, 1038, 1096, 1650, 1834
Bse1I	ACTGG	3 cut(s)	268, 1336, 1852
BseBI	CCWGG	4 cut(s)	31, 601, 703, 1091
BseDI	CCNNGG	9 cut(s)	114, 524, 599, 600, 1011, 1027, 1045, 1198, 1207
BseGI	GGATG	2 cut(s)	1316, 1744
BseLI	CCNNNNNNNGG	5 cut(s)	155, 605, 922, 1096, 1732
BseMII	CTCAG	6 cut(s)	196, 432, 465, 1073, 1121, 1821
BseNI	ACTGG	3 cut(s)	268, 1336, 1852
BseRI	GAGGAG	3 cut(s)	178, 1638, 1921
BseSI	GKGCMC	2 cut(s)	122, 363
BseX3I	CGGCCG	2 cut(s)	546, 855
BseXI	GCAGC	3 cut(s)	336, 1782, 1968
Bsh1236I	CGCG	6 cut(s)	258, 687, 903, 1047, 1366, 1437
Bsh1285I	CGRYCG	5 cut(s)	382, 439, 549, 858, 1507
BshNI	GGYRCC	1 cut(s)	1032
BshTI	ACCGGT	1 cut(s)	1038
BsiEI	CGRYCG	5 cut(s)	382, 439, 549, 858, 1507
BsiHKCI	CYCGRG	4 cut(s)	524, 819, 1028, 1708
BsiWI	CGTACG	2 cut(s)	585, 1863
BslFI	GGGAC	4 cut(s)	25, 582, 617, 1394
BslI	CCNNNNNNNGG	5 cut(s)	155, 605, 922, 1096, 1732
BsmAI	GTCTC	5 cut(s)	842, 1110, 1294, 1620, 1776
BsmBI	CGTCTC	2 cut(s)	1110, 1776
BsmFI	GGGAC	4 cut(s)	25, 582, 617, 1394
BsmI	GAATGC	1 cut(s)	352
Bso31I	GGTCTC	2 cut(s)	842, 1620
BsoBI	CYCGRG	4 cut(s)	524, 819, 1028, 1708
Bsp119I	TTCGAA	2 cut(s)	789, 1646
Bsp1286I	GDGCHC	4 cut(s)	114, 122, 363, 1292
Bsp143I	GATC	6 cut(s)	1077, 1171, 1387, 1425, 1722, 1758
Bsp1720I	GCTNAGC	1 cut(s)	1830
Bsp68I	TCGCGA	1 cut(s)	1437
BspCNI	CTCAG	6 cut(s)	195, 431, 466, 1072, 1122, 1822
BspFNI	CGCG	6 cut(s)	258, 687, 903, 1047, 1366, 1437
BspLI	GGNNCC	8 cut(s)	111, 1034, 1043, 1095, 1289, 1587, 1724, 1992
BspPI	GGATC	4 cut(s)	1420, 1717, 1730, 1766
BspT104I	TTCGAA	2 cut(s)	789, 1646
BspT107I	GGYRCC	1 cut(s)	1032
BspTNI	GGTCTC	2 cut(s)	842, 1620
BsrFI	RCCGGY	6 cut(s)	381, 438, 1038, 1096, 1650, 1834
BsrI	ACTGG	3 cut(s)	268, 1336, 1852
BssAI	RCCGGY	6 cut(s)	381, 438, 1038, 1096, 1650, 1834
BssECI	CCNNGG	9 cut(s)	114, 524, 599, 600, 1011, 1027, 1045, 1198, 1207
BssMI	GATC	6 cut(s)	1077, 1171, 1387, 1425, 1722, 1758
BssNI	GRCGYC	5 cut(s)	936, 1167, 1212, 1407, 1539
BssSI	CACGAG	1 cut(s)	1490
BssT1I	CCWWGG	2 cut(s)	114, 1198
Bst2BI	CACGAG	1 cut(s)	1490
Bst2UI	CCWGG	4 cut(s)	31, 601, 703, 1091
Bst4CI	ACNGT	4 cut(s)	139, 542, 1354, 1397
Bst6I	CTCTTC	2 cut(s)	377, 1648
BstACI	GRCGYC	5 cut(s)	936, 1167, 1212, 1407, 1539
BstAPI	GCANNNNNTGC	1 cut(s)	358
BstBAI	YACGTR	4 cut(s)	922, 1729, 1768, 1879
BstBI	TTCGAA	2 cut(s)	789, 1646
BstC8I	GCNNGC	4 cut(s)	256, 306, 404, 1940
BstDEI	CTNAG	6 cut(s)	182, 418, 474, 1059, 1130, 1830
BstDSI	CCRYGG	1 cut(s)	1045
BstEII	GGTNACC	1 cut(s)	961
BstF5I	GGATG	2 cut(s)	1316, 1744
BstFNI	CGCG	6 cut(s)	258, 687, 903, 1047, 1366, 1437
BstHHI	GCGC	2 cut(s)	687, 1366
BstKTI	GATC	6 cut(s)	1080, 1174, 1390, 1428, 1725, 1761
BstMAI	GTCTC	5 cut(s)	842, 1110, 1294, 1620, 1776
BstMBI	GATC	6 cut(s)	1077, 1171, 1387, 1425, 1722, 1758
BstMCI	CGRYCG	5 cut(s)	382, 439, 549, 858, 1507
BstMWI	GCNNNNNNNGC	5 cut(s)	251, 358, 439, 664, 1948
BstNI	CCWGG	4 cut(s)	31, 601, 703, 1091
BstPAI	GACNNNNGTC	1 cut(s)	1352
BstPI	GGTNACC	1 cut(s)	961
BstSLI	GKGCMC	2 cut(s)	122, 363
BstUI	CGCG	6 cut(s)	258, 687, 903, 1047, 1366, 1437
BstV1I	GCAGC	3 cut(s)	336, 1782, 1968
BstV2I	GAAGAC	7 cut(s)	271, 509, 634, 880, 922, 953, 1446
BstX2I	RGATCY	2 cut(s)	1425, 1722
BstYI	RGATCY	2 cut(s)	1425, 1722
BstZI	CGGCCG	2 cut(s)	546, 855
BtgI	CCRYGG	1 cut(s)	1045
BtgZI	GCGATG	3 cut(s)	716, 871, 1618
BtrI	CACGTC	4 cut(s)	1306, 1744, 1917, 1947
BtsCI	GGATG	2 cut(s)	1316, 1744
BtsI	GCAGTG	1 cut(s)	841
BtsIMutI	CAGTG	3 cut(s)	471, 841, 1067
BtuMI	TCGCGA	1 cut(s)	1437
Cac8I	GCNNGC	4 cut(s)	256, 306, 404, 1940
CfoI	GCGC	2 cut(s)	687, 1366
Cfr10I	RCCGGY	6 cut(s)	381, 438, 1038, 1096, 1650, 1834
Cfr13I	GGNCC	9 cut(s)	384, 696, 705, 756, 1227, 1354, 1500, 1586, 1991
Cfr42I	CCGCGG	1 cut(s)	1048
Cfr9I	CCCGGG	1 cut(s)	524
CpoI	CGGWCCG	1 cut(s)	1500
CseI	GACGC	4 cut(s)	979, 1175, 1201, 1547
CsiI	ACCWGGT	1 cut(s)	701
Csp6I	GTAC	5 cut(s)	17, 586, 1033, 1864, 1876
CspAI	ACCGGT	1 cut(s)	1038
CspCI	CAANNNNNGTGG	2 cut(s)	460, 495
CspI	CGGWCCG	1 cut(s)	1500
CviAII	CATG	3 cut(s)	862, 1413, 1603
CviQI	GTAC	5 cut(s)	17, 586, 1033, 1864, 1876
DdeI	CTNAG	6 cut(s)	182, 418, 474, 1059, 1130, 1830
DpnI	GATC	6 cut(s)	1079, 1173, 1389, 1427, 1724, 1760
DpnII	GATC	6 cut(s)	1077, 1171, 1387, 1425, 1722, 1758
DrdI	GACNNNNNNGTC	1 cut(s)	638
DriI	GACNNNNNGTC	3 cut(s)	268, 954, 1483
DseDI	GACNNNNNNGTC	1 cut(s)	638
EaeI	YGGCCR	3 cut(s)	142, 546, 855
EagI	CGGCCG	2 cut(s)	546, 855
Eam1104I	CTCTTC	2 cut(s)	377, 1648
Eam1105I	GACNNNNNGTC	3 cut(s)	268, 954, 1483
EarI	CTCTTC	2 cut(s)	377, 1648
EciI	GGCGGA	4 cut(s)	167, 510, 1341, 1578
EclXI	CGGCCG	2 cut(s)	546, 855
Eco130I	CCWWGG	2 cut(s)	114, 1198
Eco24I	GRGCYC	2 cut(s)	114, 1292
Eco31I	GGTCTC	2 cut(s)	842, 1620
Eco47I	GGWCC	5 cut(s)	705, 1227, 1354, 1500, 1991
Eco52I	CGGCCG	2 cut(s)	546, 855
Eco72I	CACGTG	3 cut(s)	922, 1729, 1768
Eco88I	CYCGRG	4 cut(s)	524, 819, 1028, 1708
Eco91I	GGTNACC	1 cut(s)	961
EcoO109I	RGGNCCY	1 cut(s)	1991
EcoO65I	GGTNACC	1 cut(s)	961
EcoRII	CCWGG	4 cut(s)	29, 599, 701, 1089
EcoT14I	CCWWGG	2 cut(s)	114, 1198
EcoT38I	GRGCYC	2 cut(s)	114, 1292
ErhI	CCWWGG	2 cut(s)	114, 1198
Esp3I	CGTCTC	2 cut(s)	1110, 1776
FaeI	CATG	3 cut(s)	865, 1416, 1606
FaiI	YATR	9 cut(s)	24, 802, 863, 1310, 1312, 1322, 1414, 1604, 1929
FalI	AAGNNNNNCTT	2 cut(s)	395, 427
FaqI	GGGAC	4 cut(s)	25, 582, 617, 1394
FatI	CATG	3 cut(s)	861, 1412, 1602
FauI	CCCGC	4 cut(s)	263, 313, 683, 1726
FblI	GTMKAC	3 cut(s)	939, 1055, 1536
FokI	GGATG	2 cut(s)	1303, 1751
FriOI	GRGCYC	2 cut(s)	114, 1292
GlaI	GCGC	2 cut(s)	686, 1365
GsuI	CTGGAG	4 cut(s)	52, 1112, 1306, 2025
HgaI	GACGC	4 cut(s)	979, 1175, 1201, 1547
HhaI	GCGC	2 cut(s)	687, 1366
Hin1I	GRCGYC	5 cut(s)	936, 1167, 1212, 1407, 1539
Hin1II	CATG	3 cut(s)	865, 1416, 1606
Hin6I	GCGC	2 cut(s)	685, 1364
HinP1I	GCGC	2 cut(s)	685, 1364
HincII	GTYRAC	7 cut(s)	516, 810, 940, 1056, 1537, 1546, 1578
HindII	GTYRAC	7 cut(s)	516, 810, 940, 1056, 1537, 1546, 1578
HpaI	GTTAAC	1 cut(s)	1546
HphI	GGTGA	8 cut(s)	208, 497, 608, 955, 1079, 1409, 1894, 1970
Hpy166II	GTNNAC	9 cut(s)	516, 810, 940, 1056, 1537, 1546, 1578, 1747, 1803
Hpy188III	TCNNGA	7 cut(s)	425, 448, 1150, 1163, 1190, 1357, 1436
Hpy8I	GTNNAC	9 cut(s)	516, 810, 940, 1056, 1537, 1546, 1578, 1747, 1803
HpyAV	CCTTC	5 cut(s)	1165, 1282, 1468, 1648, 2004
HpyCH4III	ACNGT	4 cut(s)	139, 542, 1354, 1397
HpyCH4V	TGCA	4 cut(s)	352, 800, 865, 1416
HpyF10VI	GCNNNNNNNGC	5 cut(s)	251, 358, 439, 664, 1948
HpyF3I	CTNAG	6 cut(s)	182, 418, 474, 1059, 1130, 1830
Hsp92I	GRCGYC	5 cut(s)	936, 1167, 1212, 1407, 1539
Hsp92II	CATG	3 cut(s)	865, 1416, 1606
HspAI	GCGC	2 cut(s)	685, 1364
KpnI	GGTACC	1 cut(s)	1036
KspAI	GTTAAC	1 cut(s)	1546
KspI	CCGCGG	1 cut(s)	1048
Kzo9I	GATC	6 cut(s)	1077, 1171, 1387, 1425, 1722, 1758
LmnI	GCTCC	5 cut(s)	109, 191, 1093, 1287, 1475
Lsp1109I	GCAGC	3 cut(s)	336, 1782, 1968
LweI	GCATC	1 cut(s)	1660
MabI	ACCWGGT	1 cut(s)	701
MaeIII	GTNAC	5 cut(s)	823, 961, 1111, 1822, 2051
MalI	GATC	6 cut(s)	1079, 1173, 1389, 1427, 1724, 1760
MboI	GATC	6 cut(s)	1077, 1171, 1387, 1425, 1722, 1758
MflI	RGATCY	2 cut(s)	1425, 1722
MhlI	GDGCHC	4 cut(s)	114, 122, 363, 1292
MluCI	AATT	3 cut(s)	248, 768, 2024
MlyI	GAGTC	8 cut(s)	52, 511, 707, 805, 1010, 1051, 1061, 1082
MmeI	TCCRAC	4 cut(s)	940, 1226, 1254, 1487
MroXI	GAANNNNTTC	1 cut(s)	950
MseI	TTAA	6 cut(s)	317, 1185, 1253, 1422, 1545, 1557
MslI	CAYNNNNRTG	1 cut(s)	1956
MspA1I	CMGCKG	1 cut(s)	1047
Mva1269I	GAATGC	1 cut(s)	352
MvaI	CCWGG	4 cut(s)	31, 601, 703, 1091
MvnI	CGCG	6 cut(s)	258, 687, 903, 1047, 1366, 1437
MwoI	GCNNNNNNNGC	5 cut(s)	251, 358, 439, 664, 1948
NdeII	GATC	6 cut(s)	1077, 1171, 1387, 1425, 1722, 1758
NlaIII	CATG	3 cut(s)	865, 1416, 1606
NlaIV	GGNNCC	8 cut(s)	111, 1034, 1043, 1095, 1289, 1587, 1724, 1992
NmeAIII	GCCGAG	1 cut(s)	1632
NmuCI	GTSAC	5 cut(s)	823, 961, 1111, 1822, 2051
NruI	TCGCGA	1 cut(s)	1437
NspV	TTCGAA	2 cut(s)	789, 1646
OliI	CACNNNNGTG	1 cut(s)	1956
PasI	CCCWGGG	1 cut(s)	600
PcsI	WCGNNNNNNNCGW	5 cut(s)	258, 432, 1173, 1227, 1586
PctI	GAATGC	1 cut(s)	352
PdmI	GAANNNNTTC	1 cut(s)	950
PfeI	GAWTC	5 cut(s)	330, 791, 879, 1329, 1566
Pfl23II	CGTACG	2 cut(s)	585, 1863
PflFI	GACNNNGTC	2 cut(s)	635, 716
PinAI	ACCGGT	1 cut(s)	1038
PleI	GAGTC	8 cut(s)	52, 511, 707, 805, 1010, 1051, 1060, 1081
PmaCI	CACGTG	3 cut(s)	922, 1729, 1768
PmlI	CACGTG	3 cut(s)	922, 1729, 1768
PpsI	GAGTC	8 cut(s)	52, 511, 707, 805, 1010, 1051, 1060, 1081
Ppu21I	YACGTR	4 cut(s)	922, 1729, 1768, 1879
PpuMI	RGGWCCY	1 cut(s)	1991
PshAI	GACNNNNGTC	1 cut(s)	1352
Psp1406I	AACGTT	1 cut(s)	1419
Psp5II	RGGWCCY	1 cut(s)	1991
Psp6I	CCWGG	4 cut(s)	29, 599, 701, 1089
PspCI	CACGTG	3 cut(s)	922, 1729, 1768
PspEI	GGTNACC	1 cut(s)	961
PspGI	CCWGG	4 cut(s)	29, 599, 701, 1089
PspLI	CGTACG	2 cut(s)	585, 1863
PspN4I	GGNNCC	8 cut(s)	111, 1034, 1043, 1095, 1289, 1587, 1724, 1992
PspPI	GGNCC	9 cut(s)	384, 696, 705, 756, 1227, 1354, 1500, 1586, 1991
PspPPI	RGGWCCY	1 cut(s)	1991
PsrI	GAACNNNNNNTAC	2 cut(s)	1025, 1057
PsuI	RGATCY	2 cut(s)	1425, 1722
PsyI	GACNNNGTC	2 cut(s)	635, 716
RruI	TCGCGA	1 cut(s)	1437
RsaI	GTAC	5 cut(s)	18, 587, 1034, 1865, 1877
RsaNI	GTAC	5 cut(s)	17, 586, 1033, 1864, 1876
RseI	CAYNNNNRTG	1 cut(s)	1956
Rsr2I	CGGWCCG	1 cut(s)	1500
RsrII	CGGWCCG	1 cut(s)	1500
SacII	CCGCGG	1 cut(s)	1048
SalI	GTCGAC	3 cut(s)	938, 1054, 1535
SaqAI	TTAA	6 cut(s)	317, 1185, 1253, 1422, 1545, 1557
Sau3AI	GATC	6 cut(s)	1077, 1171, 1387, 1425, 1722, 1758
Sau96I	GGNCC	9 cut(s)	384, 696, 705, 756, 1227, 1354, 1500, 1586, 1991
SchI	GAGTC	8 cut(s)	52, 511, 707, 805, 1010, 1051, 1061, 1082
SduI	GDGCHC	4 cut(s)	114, 122, 363, 1292
SexAI	ACCWGGT	1 cut(s)	701
SfaNI	GCATC	1 cut(s)	1660
Sfr303I	CCGCGG	1 cut(s)	1048
SfuI	TTCGAA	2 cut(s)	789, 1646
SgrBI	CCGCGG	1 cut(s)	1048
SinI	GGWCC	5 cut(s)	705, 1227, 1354, 1500, 1991
SmaI	CCCGGG	1 cut(s)	526
SmiMI	CAYNNNNRTG	1 cut(s)	1956
SmlI	CTYRAG	1 cut(s)	2015
SmoI	CTYRAG	1 cut(s)	2015
Sse9I	AATT	3 cut(s)	248, 768, 2024
StyI	CCWWGG	2 cut(s)	114, 1198
TaaI	ACNGT	4 cut(s)	139, 542, 1354, 1397
TasI	AATT	3 cut(s)	248, 768, 2024
TauI	GCSGC	8 cut(s)	690, 860, 900, 903, 1050, 1071, 1266, 1981
TfiI	GAWTC	5 cut(s)	330, 791, 879, 1329, 1566
Tru1I	TTAA	6 cut(s)	317, 1185, 1253, 1422, 1545, 1557
Tru9I	TTAA	6 cut(s)	317, 1185, 1253, 1422, 1545, 1557
TscAI	CASTG	3 cut(s)	478, 848, 1067
TseFI	GTSAC	5 cut(s)	823, 961, 1111, 1822, 2051
TseI	GCWGC	3 cut(s)	349, 1795, 1981
Tsp45I	GTSAC	5 cut(s)	823, 961, 1111, 1822, 2051
TspDTI	ATGAA	3 cut(s)	271, 403, 719
TspGWI	ACGGA	7 cut(s)	346, 706, 819, 885, 944, 1559, 1595
TspMI	CCCGGG	1 cut(s)	524
TspRI	CASTG	3 cut(s)	478, 848, 1067
Tth111I	GACNNNGTC	2 cut(s)	635, 716
VpaK11BI	GGWCC	5 cut(s)	705, 1227, 1354, 1500, 1991
XmaI	CCCGGG	1 cut(s)	524
XmiI	GTMKAC	3 cut(s)	939, 1055, 1536
XmnI	GAANNNNTTC	1 cut(s)	950
ZraI	GACGTC	2 cut(s)	937, 1408

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.