Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0007043

Physical Location & Seq

Genomic Coordinates Forward (+)

30240674 .. 30242581

Gene Structure 1908 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0294100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1395 bp

ATGGCTTCAGCGATTCTTTCATGGTTGAGTTTCGTATTAATAACACTGGGAGTACTTGGTGCATTGTTTGTTAACCCTTCATGTTCCACTTCAAGAAGAGCTCTAGATCTCCACGACCATGGCTTACAGGTGCAAAGTGGGTTCAAGGTGACTCTCAAACACGTGGATTCTGGAAAGAACCTAACCAGACTTGAACGTCTTCAACGCCGAATCAAGCGAGGACGAAAGAGGCTGCAAAGGCTGAATGCAATGAAGCTCAAGAGCTCTACATCACCAGATAGTCATACCAAAGTTGAAACTCCGGTTCATGCAGGCCTGGGAGAGTTTTTGATGACGTTATCGATTGGTACTCCGGCAAAGAGCTTTTCAGCAATTGTGGACACGGGGAGCGATCTTATATGGACTCAGTGCGAGCCATGCAAGCAATGTTATAAGCAGCCAACCCCAATTTTCAACCCGAAAGAATCTTCTACTTTCTCAAAGGTGTCATGTACAAGCGAGCTATGTGATGCACTGCCCTCCTCGAAATGCACTAACAAAAGCTGTGAGTATTACTACACTTATGGCGATTCTTCATCAACGGATGGGATTCTCGCAACCGAAACGTTCTCTTTCGGAGACGAAGACTCCAGCGACGTTTCCATTCCCAAAATTAGTTTTGGATGTGGAGGAGACAACGAGGGTGGCGGGTTCAACCAAGGCGCGGGGCTCGTGGGGTTGGGCCGCGGAACCTTGTCCTTGGTTTCGCAGCTCAAGGAACCCAAGTTCTCCTATTGTCTTCCTTCCGTAGACGACACGCAAAGTACGAGCACACTTTTGATGGGGTCATTAGCAAGCTTGAACAGCAGTACATCATCATCTGATGTTGCAAACATCAAAACCACCCCTTTGATCAAAAACCCATCACAGCCTACTTTTTACTATCTTTCCCTTGAAGGAATCACCTTAGGGGGCACTCGCTTGCCTATCGCAAAAGACACATTCACCCTAGGAGATGATGGTGGCGGTGGCCTAATCATAGACTCTGGGACAACCCTTACTTATCTTGCAGAGGATGCTTACGATGCTGTTGTGAAAGAATTCACTTCCCAGATGGAACTTCCGGAGAAAGATGCGATCGACACGGTAGGGCTAGACCTGTGCTTCGAATTGCCAGAGGATGCTACCAAAGTAGAGGTGCCCAAGCTGGTATTTCATTTCAAGGATGCAGATTTGGAACTGCCTAGTGAGAATTATATGATTGCGGATTCGGACGTTGGAGTCATTTGCTTGGCTGCTGGGAGCGCCGGGGATATGTCTGTGTTTGGGAATTATCAGCAGCAGAATATGTTGGTTCTGCATGATCTAGTCAAGGAGACGATCTCGTTTGTTCCTACAAAATGCGACCAGTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003858 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0016491 GO:0016614 GO:0016616 GO:0035064 GO:0042393 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0055114 GO:0140030 GO:0140034

KEGG Pathways

Metabolic & Signaling

ko00630 ko00650 ko01100 ko01120 ko01200 map00630 map00650 map01100 map01120 map01200

Pfam Domains

Protein Families

NAD_binding_11 NAD_binding_2

Protein Analysis

464

Amino Acids

49.94

Weight (kDa)

4.97

Isoelectric Point (pI)

42.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TAXi_N	PF14543	109 - 276	6e-53	Xylanase inhibitor N-terminal
Asp	PF00026	109 - 457	5.5e-18	Eukaryotic aspartyl protease
TAXi_C	PF14541	307 - 457	9.8e-33	Xylanase inhibitor C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007043)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G25530 AT3G25530 AT3G25530
fragaria_vesca	FvH4_3g21710 FvH4_3g21710 FvH4_3g21710
malus_domestica	MD14G1000800.v1.1
prunus_persica	Prupe.7G000400_v2.0.a1 Prupe.7G000400_v2.0.a1
pyrus_communis	pycom49g00040
rosa_chinensis	RchiOBHm_Chr3g0497571
rosa_laevigata	RLG00000022451
rosa_multiflora	Rmu_sc0000212.1_g000018
rosa_roxburghii	Rroxscaffold_6G00387920
rosa_rugosa	Rorug03G0294100 Rorug03G0294200 Rorug03G0294200 Rorug03G0294200 Rorug03G0294300 Rorug03G0294400
rosa_samantha	Rh3AG337600 Rh3BG376200 Rh3CG371900 Rh3DG372500
rosa_wichuraiana	Rw0G011450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	432
AasI	GACNNNNNNGTC	2 cut(s)	195, 1259
AccB1I	GGYRCC	1 cut(s)	1177
AccI	GTMKAC	1 cut(s)	789
AccII	CGCG	2 cut(s)	704, 726
AccIII	TCCGGA	1 cut(s)	1102
AciI	CCGC	6 cut(s)	687, 704, 724, 726, 1005, 1244
AclI	AACGTT	1 cut(s)	605
AcsI	RAATTY	1 cut(s)	1079
AcvI	CACGTG	1 cut(s)	163
AfaI	GTAC	5 cut(s)	54, 349, 493, 805, 850
AfiI	CCNNNNNNNGG	1 cut(s)	703
AflIII	ACRYGT	1 cut(s)	160
AjnI	CCWGG	1 cut(s)	315
AloI	GAACNNNNNNTCC	2 cut(s)	749, 781
AluBI	AGCT	9 cut(s)	101, 256, 264, 363, 502, 543, 751, 837, 1186
AluI	AGCT	9 cut(s)	101, 256, 264, 363, 502, 543, 751, 837, 1186
Alw21I	GWGCWC	3 cut(s)	103, 266, 812
Alw26I	GTCTC	3 cut(s)	612, 666, 1349
Aor13HI	TCCGGA	1 cut(s)	1102
AoxI	GGCC	3 cut(s)	313, 721, 1009
ApeKI	GCWGC	5 cut(s)	232, 436, 748, 1274, 1318
ApoI	RAATTY	1 cut(s)	1079
ArsI	GACNNNNNNTTYG	2 cut(s)	1127, 1159
AseI	ATTAAT	1 cut(s)	38
Asp700I	GAANNNNTTC	2 cut(s)	198, 1079
AspA2I	CCTAGG	1 cut(s)	988
AspLEI	GCGC	2 cut(s)	704, 1286
AspS9I	GGNCC	1 cut(s)	721
AsuC2I	CCSGG	1 cut(s)	1288
AsuHPI	GGTGA	4 cut(s)	160, 264, 934, 976
AsuII	TTCGAA	1 cut(s)	1146
AvrII	CCTAGG	1 cut(s)	988
AxyI	CCTNAGG	1 cut(s)	946
BaeGI	GKGCMC	2 cut(s)	956, 1182
BanI	GGYRCC	1 cut(s)	1177
BanII	GRGCYC	3 cut(s)	103, 266, 711
BauI	CACGAG	1 cut(s)	710
BbrPI	CACGTG	1 cut(s)	163
BbsI	GAAGAC	3 cut(s)	191, 630, 770
Bbv12I	GWGCWC	3 cut(s)	103, 266, 812
BbvI	GCAGC	5 cut(s)	219, 448, 760, 1261, 1330
BccI	CCATC	5 cut(s)	578, 814, 910, 992, 1087
BciT130I	CCWGG	1 cut(s)	317
BclI	TGATCA	1 cut(s)	891
BcnI	CCSGG	1 cut(s)	1288
BcoDI	GTCTC	3 cut(s)	612, 666, 1349
BfaI	CTAG	5 cut(s)	104, 989, 1133, 1224, 1346
BfoI	RGCGCY	1 cut(s)	1287
BglII	AGATCT	1 cut(s)	106
BisI	GCNGC	6 cut(s)	233, 437, 724, 749, 1275, 1319
BlnI	CCTAGG	1 cut(s)	988
BlsI	GCNGC	6 cut(s)	234, 438, 725, 750, 1276, 1320
BmcAI	AGTACT	1 cut(s)	54
Bme1390I	CCNGG	2 cut(s)	317, 1288
BmgT120I	GGNCC	1 cut(s)	721
BmiI	GGNNCC	3 cut(s)	730, 759, 1179
BmrFI	CCNGG	2 cut(s)	317, 1288
BmrI	ACTGGG	1 cut(s)	56
BmsI	GCATC	6 cut(s)	499, 1045, 1054, 1102, 1150, 1195
BmuI	ACTGGG	1 cut(s)	56
BpiI	GAAGAC	3 cut(s)	191, 630, 770
BplI	GAGNNNNNCTC	2 cut(s)	1346, 1378
BpmI	CTGGAG	1 cut(s)	613
Bpu14I	TTCGAA	1 cut(s)	1146
BpuEI	CTTGAG	2 cut(s)	242, 737
BpuMI	CCSGG	1 cut(s)	1288
Bsa29I	ATCGAT	1 cut(s)	341
BsaAI	YACGTR	1 cut(s)	163
BsaJI	CCNNGG	7 cut(s)	118, 316, 697, 724, 738, 988, 1287
BsaWI	WCCGGW	2 cut(s)	301, 1102
BsaXI	ACNNNNNCTCC	2 cut(s)	611, 641
Bsc4I	CCNNNNNNNGG	1 cut(s)	703
Bse1I	ACTGG	2 cut(s)	51, 1387
Bse21I	CCTNAGG	1 cut(s)	946
Bse3DI	GCAATG	2 cut(s)	255, 431
BseAI	TCCGGA	1 cut(s)	1102
BseBI	CCWGG	1 cut(s)	317
BseCI	ATCGAT	1 cut(s)	341
BseDI	CCNNGG	7 cut(s)	118, 316, 697, 724, 738, 988, 1287
BseGI	GGATG	5 cut(s)	589, 668, 1060, 1165, 1210
BseLI	CCNNNNNNNGG	1 cut(s)	703
BseMI	GCAATG	2 cut(s)	255, 431
BseMII	CTCAG	1 cut(s)	419
BseNI	ACTGG	2 cut(s)	51, 1387
BseRI	GAGGAG	2 cut(s)	511, 684
BseSI	GKGCMC	2 cut(s)	956, 1182
BseXI	GCAGC	5 cut(s)	219, 448, 760, 1261, 1330
BseYI	CCCAGC	1 cut(s)	1277
Bsh1236I	CGCG	2 cut(s)	704, 726
Bsh1285I	CGRYCG	1 cut(s)	1119
BshFI	GGCC	3 cut(s)	315, 723, 1011
BshNI	GGYRCC	1 cut(s)	1177
BshVI	ATCGAT	1 cut(s)	341
BsiEI	CGRYCG	1 cut(s)	1119
BsiHKAI	GWGCWC	3 cut(s)	103, 266, 812
BsiSI	CCGG	4 cut(s)	302, 353, 1103, 1287
BslFI	GGGAC	1 cut(s)	1042
BslI	CCNNNNNNNGG	1 cut(s)	703
BsmAI	GTCTC	3 cut(s)	612, 666, 1349
BsmBI	CGTCTC	2 cut(s)	612, 1349
BsmFI	GGGAC	1 cut(s)	1042
BsmI	GAATGC	1 cut(s)	250
BsnI	GGCC	3 cut(s)	315, 723, 1011
Bsp119I	TTCGAA	1 cut(s)	1146
Bsp1286I	GDGCHC	6 cut(s)	103, 266, 711, 812, 956, 1182
Bsp13I	TCCGGA	1 cut(s)	1102
Bsp1407I	TGTACA	1 cut(s)	491
Bsp143I	GATC	6 cut(s)	106, 391, 891, 1116, 1342, 1359
Bsp19I	CCATGG	1 cut(s)	118
BspACI	CCGC	6 cut(s)	687, 704, 724, 726, 1005, 1244
BspANI	GGCC	3 cut(s)	315, 723, 1011
BspCNI	CTCAG	1 cut(s)	418
BspDI	ATCGAT	1 cut(s)	341
BspEI	TCCGGA	1 cut(s)	1102
BspFNI	CGCG	2 cut(s)	704, 726
BspLI	GGNNCC	3 cut(s)	730, 759, 1179
BspQI	GCTCTTC	1 cut(s)	91
BspT104I	TTCGAA	1 cut(s)	1146
BspT107I	GGYRCC	1 cut(s)	1177
BsrDI	GCAATG	2 cut(s)	255, 431
BsrGI	TGTACA	1 cut(s)	491
BsrI	ACTGG	2 cut(s)	51, 1387
BssECI	CCNNGG	7 cut(s)	118, 316, 697, 724, 738, 988, 1287
BssMI	GATC	6 cut(s)	106, 391, 891, 1116, 1342, 1359
BssSI	CACGAG	1 cut(s)	710
BssT1I	CCWWGG	4 cut(s)	118, 697, 738, 988
Bst2BI	CACGAG	1 cut(s)	710
Bst2UI	CCWGG	1 cut(s)	317
Bst4CI	ACNGT	1 cut(s)	1126
Bst6I	CTCTTC	1 cut(s)	91
BstAPI	GCANNNNNTGC	1 cut(s)	1055
BstAUI	TGTACA	1 cut(s)	491
BstBAI	YACGTR	1 cut(s)	163
BstBI	TTCGAA	1 cut(s)	1146
BstC8I	GCNNGC	6 cut(s)	313, 413, 422, 500, 835, 962
BstDEI	CTNAG	2 cut(s)	405, 946
BstDSI	CCRYGG	2 cut(s)	118, 724
BstF5I	GGATG	5 cut(s)	589, 668, 1060, 1165, 1210
BstFNI	CGCG	2 cut(s)	704, 726
BstH2I	RGCGCY	1 cut(s)	1287
BstHHI	GCGC	2 cut(s)	704, 1286
BstKTI	GATC	6 cut(s)	109, 394, 894, 1119, 1345, 1362
BstMAI	GTCTC	3 cut(s)	612, 666, 1349
BstMBI	GATC	6 cut(s)	106, 391, 891, 1116, 1342, 1359
BstMCI	CGRYCG	1 cut(s)	1119
BstMWI	GCNNNNNNNGC	7 cut(s)	238, 417, 421, 843, 1055, 1064, 1283
BstNI	CCWGG	1 cut(s)	317
BstSCI	CCNGG	2 cut(s)	315, 1286
BstSLI	GKGCMC	2 cut(s)	956, 1182
BstUI	CGCG	2 cut(s)	704, 726
BstV1I	GCAGC	5 cut(s)	219, 448, 760, 1261, 1330
BstV2I	GAAGAC	3 cut(s)	191, 630, 770
BstX2I	RGATCY	1 cut(s)	106
BstXI	CCANNNNNNTGG	1 cut(s)	119
BstYI	RGATCY	1 cut(s)	106
Bsu15I	ATCGAT	1 cut(s)	341
Bsu36I	CCTNAGG	1 cut(s)	946
BsuRI	GGCC	3 cut(s)	315, 723, 1011
BsuTUI	ATCGAT	1 cut(s)	341
BtgI	CCRYGG	2 cut(s)	118, 724
BtsCI	GGATG	5 cut(s)	589, 668, 1060, 1165, 1210
BtsI	GCAGTG	1 cut(s)	512
BtsIMutI	CAGTG	3 cut(s)	44, 413, 512
Cac8I	GCNNGC	6 cut(s)	313, 413, 422, 500, 835, 962
CfoI	GCGC	2 cut(s)	704, 1286
Cfr13I	GGNCC	1 cut(s)	721
Cfr42I	CCGCGG	1 cut(s)	727
ClaI	ATCGAT	1 cut(s)	341
Csp6I	GTAC	5 cut(s)	53, 348, 492, 804, 849
CspCI	CAANNNNNGTGG	2 cut(s)	664, 699
CviAII	CATG	7 cut(s)	21, 81, 119, 308, 417, 489, 1340
CviQI	GTAC	5 cut(s)	53, 348, 492, 804, 849
DdeI	CTNAG	2 cut(s)	405, 946
DpnI	GATC	6 cut(s)	108, 393, 893, 1118, 1344, 1361
DpnII	GATC	6 cut(s)	106, 391, 891, 1116, 1342, 1359
DrdI	GACNNNNNNGTC	2 cut(s)	195, 1259
DseDI	GACNNNNNNGTC	2 cut(s)	195, 1259
Eam1104I	CTCTTC	1 cut(s)	91
EarI	CTCTTC	1 cut(s)	91
Ecl136II	GAGCTC	2 cut(s)	101, 264
Eco130I	CCWWGG	4 cut(s)	118, 697, 738, 988
Eco147I	AGGCCT	1 cut(s)	315
Eco24I	GRGCYC	3 cut(s)	103, 266, 711
Eco53kI	GAGCTC	2 cut(s)	101, 264
Eco72I	CACGTG	1 cut(s)	163
Eco81I	CCTNAGG	1 cut(s)	946
EcoICRI	GAGCTC	2 cut(s)	101, 264
EcoRI	GAATTC	1 cut(s)	1079
EcoRII	CCWGG	1 cut(s)	315
EcoT14I	CCWWGG	4 cut(s)	118, 697, 738, 988
EcoT38I	GRGCYC	3 cut(s)	103, 266, 711
ErhI	CCWWGG	4 cut(s)	118, 697, 738, 988
Esp3I	CGTCTC	2 cut(s)	612, 1349
FaeI	CATG	7 cut(s)	24, 84, 122, 311, 420, 492, 1343
FaqI	GGGAC	1 cut(s)	1042
FatI	CATG	7 cut(s)	20, 80, 118, 307, 416, 488, 1339
FauI	CCCGC	2 cut(s)	680, 697
FbaI	TGATCA	1 cut(s)	891
FblI	GTMKAC	1 cut(s)	789
Fnu4HI	GCNGC	6 cut(s)	233, 437, 724, 749, 1275, 1319
FokI	GGATG	5 cut(s)	596, 675, 1067, 1172, 1217
FriOI	GRGCYC	3 cut(s)	103, 266, 711
Fsp4HI	GCNGC	6 cut(s)	233, 437, 724, 749, 1275, 1319
FspBI	CTAG	5 cut(s)	104, 989, 1133, 1224, 1346
GlaI	GCGC	2 cut(s)	703, 1285
GluI	GCNGC	6 cut(s)	233, 437, 724, 749, 1275, 1319
GsaI	CCCAGC	1 cut(s)	1281
GsuI	CTGGAG	1 cut(s)	613
HaeII	RGCGCY	1 cut(s)	1287
HaeIII	GGCC	3 cut(s)	315, 723, 1011
HapII	CCGG	4 cut(s)	302, 353, 1103, 1287
HhaI	GCGC	2 cut(s)	704, 1286
Hin1II	CATG	7 cut(s)	24, 84, 122, 311, 420, 492, 1343
Hin6I	GCGC	2 cut(s)	702, 1284
HinP1I	GCGC	2 cut(s)	702, 1284
HincII	GTYRAC	1 cut(s)	73
HindII	GTYRAC	1 cut(s)	73
HindIII	AAGCTT	1 cut(s)	835
HpaI	GTTAAC	1 cut(s)	73
HpaII	CCGG	4 cut(s)	302, 353, 1103, 1287
HphI	GGTGA	4 cut(s)	160, 264, 934, 976
Hpy166II	GTNNAC	3 cut(s)	73, 379, 790
Hpy188I	TCNGA	3 cut(s)	617, 862, 1252
Hpy188III	TCNNGA	5 cut(s)	93, 104, 171, 259, 1103
Hpy8I	GTNNAC	3 cut(s)	73, 379, 790
Hpy99I	CGWCG	1 cut(s)	638
HpyAV	CCTTC	3 cut(s)	87, 792, 929
HpyCH4III	ACNGT	1 cut(s)	1126
HpyCH4IV	ACGT	6 cut(s)	162, 196, 335, 605, 636, 1254
HpyF10VI	GCNNNNNNNGC	7 cut(s)	238, 417, 421, 843, 1055, 1064, 1283
HpyF3I	CTNAG	2 cut(s)	405, 946
HpySE526I	ACGT	6 cut(s)	162, 196, 335, 605, 636, 1254
Hsp92II	CATG	7 cut(s)	24, 84, 122, 311, 420, 492, 1343
HspAI	GCGC	2 cut(s)	702, 1284
Kpn2I	TCCGGA	1 cut(s)	1102
Ksp22I	TGATCA	1 cut(s)	891
KspAI	GTTAAC	1 cut(s)	73
KspI	CCGCGG	1 cut(s)	727
Kzo9I	GATC	6 cut(s)	106, 391, 891, 1116, 1342, 1359
LguI	GCTCTTC	1 cut(s)	91
LmnI	GCTCC	2 cut(s)	387, 1281
Lsp1109I	GCAGC	5 cut(s)	219, 448, 760, 1261, 1330
LweI	GCATC	6 cut(s)	499, 1045, 1054, 1102, 1150, 1195
MaeI	CTAG	5 cut(s)	104, 989, 1133, 1224, 1346
MaeII	ACGT	6 cut(s)	162, 196, 335, 605, 636, 1254
MaeIII	GTNAC	1 cut(s)	148
MalI	GATC	6 cut(s)	108, 393, 893, 1118, 1344, 1361
MboI	GATC	6 cut(s)	106, 391, 891, 1116, 1342, 1359
MboII	GAAGA	6 cut(s)	108, 191, 459, 564, 635, 770
MfeI	CAATTG	1 cut(s)	372
MflI	RGATCY	1 cut(s)	106
MhlI	GDGCHC	6 cut(s)	103, 266, 711, 812, 956, 1182
MluCI	AATT	7 cut(s)	372, 447, 651, 1079, 1148, 1231, 1309
MlyI	GAGTC	5 cut(s)	145, 397, 620, 1016, 1269
MmeI	TCCRAC	1 cut(s)	1237
MnlI	CCTC	9 cut(s)	212, 222, 529, 532, 662, 673, 1045, 1150, 1168
MroI	TCCGGA	1 cut(s)	1102
MroXI	GAANNNNTTC	2 cut(s)	198, 1079
MseI	TTAA	2 cut(s)	38, 72
MslI	CAYNNNNRTG	1 cut(s)	117
MspA1I	CMGCKG	1 cut(s)	726
MspI	CCGG	4 cut(s)	302, 353, 1103, 1287
MspR9I	CCNGG	2 cut(s)	317, 1288
MunI	CAATTG	1 cut(s)	372
Mva1269I	GAATGC	1 cut(s)	250
MvaI	CCWGG	1 cut(s)	317
MvnI	CGCG	2 cut(s)	704, 726
MwoI	GCNNNNNNNGC	7 cut(s)	238, 417, 421, 843, 1055, 1064, 1283
NciI	CCSGG	1 cut(s)	1288
NcoI	CCATGG	1 cut(s)	118
NdeII	GATC	6 cut(s)	106, 391, 891, 1116, 1342, 1359
NlaIII	CATG	7 cut(s)	24, 84, 122, 311, 420, 492, 1343
NlaIV	GGNNCC	3 cut(s)	730, 759, 1179
NmuCI	GTSAC	1 cut(s)	148
NspV	TTCGAA	1 cut(s)	1146
PceI	AGGCCT	1 cut(s)	315
PciSI	GCTCTTC	1 cut(s)	91
PcsI	WCGNNNNNNNCGW	1 cut(s)	803
PctI	GAATGC	1 cut(s)	250
PdmI	GAANNNNTTC	2 cut(s)	198, 1079
PfeI	GAWTC	8 cut(s)	13, 167, 210, 464, 569, 589, 939, 1247
PkrI	GCNGC	6 cut(s)	234, 438, 725, 750, 1276, 1320
Ple19I	CGATCG	1 cut(s)	1119
PleI	GAGTC	5 cut(s)	145, 397, 620, 1016, 1268
PmaCI	CACGTG	1 cut(s)	163
PmlI	CACGTG	1 cut(s)	163
PpsI	GAGTC	5 cut(s)	145, 397, 620, 1016, 1268
Ppu21I	YACGTR	1 cut(s)	163
PshBI	ATTAAT	1 cut(s)	38
PsiI	TTATAA	1 cut(s)	432
Psp124BI	GAGCTC	2 cut(s)	103, 266
Psp1406I	AACGTT	1 cut(s)	605
Psp6I	CCWGG	1 cut(s)	315
PspCI	CACGTG	1 cut(s)	163
PspFI	CCCAGC	1 cut(s)	1277
PspGI	CCWGG	1 cut(s)	315
PspN4I	GGNNCC	3 cut(s)	730, 759, 1179
PspPI	GGNCC	1 cut(s)	721
PsuI	RGATCY	1 cut(s)	106
PvuI	CGATCG	1 cut(s)	1119
RsaI	GTAC	5 cut(s)	54, 349, 493, 805, 850
RsaNI	GTAC	5 cut(s)	53, 348, 492, 804, 849
RseI	CAYNNNNRTG	1 cut(s)	117
SacI	GAGCTC	2 cut(s)	103, 266
SacII	CCGCGG	1 cut(s)	727
SapI	GCTCTTC	1 cut(s)	91
SaqAI	TTAA	2 cut(s)	38, 72
SatI	GCNGC	6 cut(s)	233, 437, 724, 749, 1275, 1319
Sau3AI	GATC	6 cut(s)	106, 391, 891, 1116, 1342, 1359
Sau96I	GGNCC	1 cut(s)	721
ScaI	AGTACT	1 cut(s)	54
SchI	GAGTC	5 cut(s)	145, 397, 620, 1016, 1269
ScrFI	CCNGG	2 cut(s)	317, 1288
SduI	GDGCHC	6 cut(s)	103, 266, 711, 812, 956, 1182
SfaNI	GCATC	6 cut(s)	499, 1045, 1054, 1102, 1150, 1195
Sfr303I	CCGCGG	1 cut(s)	727
SfuI	TTCGAA	1 cut(s)	1146
SgrBI	CCGCGG	1 cut(s)	727
SmiMI	CAYNNNNRTG	1 cut(s)	117
SmlI	CTYRAG	2 cut(s)	257, 752
SmoI	CTYRAG	2 cut(s)	257, 752
Sse9I	AATT	7 cut(s)	372, 447, 651, 1079, 1148, 1231, 1309
SseBI	AGGCCT	1 cut(s)	315
SsiI	CCGC	6 cut(s)	687, 704, 724, 726, 1005, 1244
SspMI	CTAG	5 cut(s)	104, 989, 1133, 1224, 1346
SstI	GAGCTC	2 cut(s)	103, 266
StuI	AGGCCT	1 cut(s)	315
StyD4I	CCNGG	2 cut(s)	315, 1286
StyI	CCWWGG	4 cut(s)	118, 697, 738, 988
TaaI	ACNGT	1 cut(s)	1126
TaiI	ACGT	6 cut(s)	165, 199, 338, 608, 639, 1257
TaqI	TCGA	4 cut(s)	341, 524, 1119, 1146
TasI	AATT	7 cut(s)	372, 447, 651, 1079, 1148, 1231, 1309
TatI	WGTACW	3 cut(s)	52, 491, 848
TauI	GCSGC	1 cut(s)	726
TfiI	GAWTC	8 cut(s)	13, 167, 210, 464, 569, 589, 939, 1247
Tru1I	TTAA	2 cut(s)	38, 72
Tru9I	TTAA	2 cut(s)	38, 72
TscAI	CASTG	3 cut(s)	51, 413, 519
TseFI	GTSAC	1 cut(s)	148
TseI	GCWGC	5 cut(s)	232, 436, 748, 1274, 1318
Tsp45I	GTSAC	1 cut(s)	148
TspDTI	ATGAA	6 cut(s)	9, 69, 266, 296, 564, 1184
TspGWI	ACGGA	2 cut(s)	596, 775
TspRI	CASTG	3 cut(s)	51, 413, 519
VspI	ATTAAT	1 cut(s)	38
XapI	RAATTY	1 cut(s)	1079
XbaI	TCTAGA	1 cut(s)	103
XmaJI	CCTAGG	1 cut(s)	988
XmiI	GTMKAC	1 cut(s)	789
XmnI	GAANNNNTTC	2 cut(s)	198, 1079
XspI	CTAG	5 cut(s)	104, 989, 1133, 1224, 1346
ZrmI	AGTACT	1 cut(s)	54

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.