Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0002036

Physical Location & Seq

Genomic Coordinates Reverse (-)

30267715 .. 30271335

Gene Structure 3621 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0294400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1389 bp

ATGGAACCTAAACCAGACCCGGATATTGATGATGATTTTAGCGAGCTGTACAAGGAGTACACTGGCCCTCCTGGGTCAAATGCCACAAACACACAGGACAGAGCAAAACCGAATAAGAGGTCCCTTGCTGGGTCTGATGAGGAAGAGGAAGCTCGCGACCCGAATGCTGTCCCGACTGATTTCACTAGCCGGGAAGCTAAGGTTTGGGAGGCAAAGTCAAAAGCTACTGAGAGGAATTGGAAGAAGAGGAAGGAAGAGGAACTGATTTGCAAAATATGCGGAGAATCGGGGCACTTTACTCAGGGGTGCCCATCTACTCTTGGAGCAAATCGCAAGTCTCAAGATTTCTTTGAAAGGGTACCTGCTAGAGAAAAGCATGTAAGAGCGCTTTTCACAGAGAAAGTGATAAACAGGATTGAAAAGGATATTGGCTGCAATATTAAGATGGACGAGAAATTCATCATTGTCAGTGGCAAAGATAGGTTAATATTAAGGAAAGGCGTGGATGCTGTGCACAAGATGATGAGAGAGGAAGGTGAACAACGGGGTAGTTCTCAAGTGACTAGATCAAGGTCACCCGAGCGAAGCCCTGTTGGTTCACGGTTACACCGCTCTGAATCCCAGAGGTCTCATTCTGGTCCTCGTAATGGATCAAACTTTCAACCAAGGTTTCACAGGCAGGAGAAGTTTGTTGAAGACCGTATACGTCAAAATATGCAAAAATTTTCCAGGGGTTCTCCACAAGCTTATGGTAATGACGGAGCTCGAGGTCGGCCAAGTCATTCAAATTCTCCAGCACGTGCCCCTTACATGGGCAACTCATATAATTCATATGATGGTCATAATCAGAGCATGGCCACTTATAGAAATGATGGATGGGAATCTGATAAAAAGGGATCTGATGTGCAATCTGGTCATCAGTTTGATTACCCAACCGTCCCACAGACATTAGAAGAATTAGAATTGGAGTACAAAAGAGAGGCGATGGAGCTTGGAAGAATTCGTGACAAAGAAGAAGATGAAGAAAATTACAAACATCGTGAGGCCATTAGGGAAATGCGAGAGAACTACATGAAGAAACTGGCTACCTTGAGGGGCATGCATGCAAAACAGTGGGAGAATTTTCTTCAGCTTGATGCCCAGAGACGTCAACAACAGGCTCATCAGCAAATGCCCACCGCAGGTTTTGGTAGTTACAAATCACACAATTACGCTGAATATGACGGCCCAGCAGCTAATCCTCATTATTCCGGGCCTACTTTAGCAATGGATTCAAGGAGCAGGTACCCACACGCTATGGAAAATTATCCTTCAAGACCTCATGACAATTTTGGTGAGTTCCAGCGTCAGAGACATGAGGATTATGGGAGAGGTTACAATCGATACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003858 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0016491 GO:0016614 GO:0016616 GO:0035064 GO:0042393 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0055114 GO:0140030 GO:0140034

KEGG Pathways

Metabolic & Signaling

ko00630 ko00650 ko01100 ko01120 ko01200 map00630 map00650 map01100 map01120 map01200

Pfam Domains

Protein Families

NAD_binding_11 NAD_binding_2

Protein Analysis

462

Amino Acids

53.54

Weight (kDa)

8.73

Isoelectric Point (pI)

59.04

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002036)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g28880 FvH4_1g29111 FvH4_1g29422 FvH4_3g26312 FvH4_3g30613 FvH4_3g37082 FvH4_6g20922
rosa_chinensis	RchiOBHm_Chr6g0267751
rosa_laevigata	RLG00000001633 RLG00000009125 RLG00000009185 RLG00000013920 RLG00000029463 RLG00000035008
rosa_multiflora	Rmu_sc0000725.1_g000014 Rmu_sc0007681.1_g000006 Rmu_sc0008058.1_g000006 Rmu_ssc0000146.1_g000011
rosa_roxburghii	Rroxscaffold_3G00236910 Rroxscaffold_4G00328890 Rroxscaffold_5G00347550 Rroxscaffold_7G00199890
rosa_rugosa	Rorug03G0294400 Rorug04G0032500 Rorug07G0164400 Rorug07G0242300
rosa_samantha	Rh1AG092000 Rh1AG092100 Rh1CG089000 Rh1CG089100 Rh4AG132600 Rh4BG108900 Rh4CG140300 Rh4DG100900 Rh4DG101000 Rh4DG109200 Rh6BG164600 Rh6DG150300 Rh6DG150400 Rh7AG351300 Rh7BG377400 Rh7BG408800 Rh7CG332900 Rh7CG368600 Rh7DG348100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1150
Acc36I	ACCTGC	3 cut(s)	370, 1172, 1272
Acc65I	GGTACC	2 cut(s)	358, 1284
AccB1I	GGYRCC	3 cut(s)	306, 358, 1284
AccBSI	CCGCTC	1 cut(s)	612
AccI	GTMKAC	1 cut(s)	703
AccII	CGCG	1 cut(s)	156
AciI	CCGC	3 cut(s)	279, 610, 1179
AclWI	GGATC	2 cut(s)	658, 904
AcoI	YGGCCR	2 cut(s)	773, 855
AcsI	RAATTY	5 cut(s)	455, 722, 787, 999, 1120
AcuI	CTGAAG	1 cut(s)	1112
AcvI	CACGTG	1 cut(s)	800
AcyI	GRCGYC	1 cut(s)	1147
AfaI	GTAC	5 cut(s)	50, 59, 360, 971, 1286
AfeI	AGCGCT	1 cut(s)	387
AfiI	CCNNNNNNNGG	5 cut(s)	129, 647, 811, 812, 1181
AgsI	TTSAA	7 cut(s)	353, 419, 662, 695, 786, 1275, 1314
AjnI	CCWGG	2 cut(s)	70, 728
AjuI	GAANNNNNNNTTGG	2 cut(s)	411, 443
AluBI	AGCT	9 cut(s)	46, 152, 197, 224, 746, 764, 991, 1132, 1235
AluI	AGCT	9 cut(s)	46, 152, 197, 224, 746, 764, 991, 1132, 1235
Alw21I	GWGCWC	2 cut(s)	516, 766
Alw26I	GTCTC	4 cut(s)	342, 633, 1138, 1345
Alw44I	GTGCAC	1 cut(s)	512
AlwI	GGATC	2 cut(s)	658, 904
Ama87I	CYCGRG	2 cut(s)	578, 765
Aor51HI	AGCGCT	1 cut(s)	387
AoxI	GGCC	6 cut(s)	64, 773, 855, 1044, 1225, 1253
ApaLI	GTGCAC	1 cut(s)	512
ApeKI	GCWGC	2 cut(s)	432, 1232
ApoI	RAATTY	5 cut(s)	455, 722, 787, 999, 1120
ArsI	GACNNNNNNTTYG	4 cut(s)	104, 136, 320, 352
Asp718I	GGTACC	2 cut(s)	358, 1284
AspLEI	GCGC	1 cut(s)	388
AspS9I	GGNCC	5 cut(s)	65, 120, 638, 1226, 1253
AsuC2I	CCSGG	3 cut(s)	20, 191, 1252
AsuHPI	GGTGA	3 cut(s)	548, 567, 1346
AvaI	CYCGRG	2 cut(s)	578, 765
AvaII	GGWCC	2 cut(s)	120, 638
BaeGI	GKGCMC	4 cut(s)	294, 311, 516, 805
BalI	TGGCCA	1 cut(s)	857
BanI	GGYRCC	3 cut(s)	306, 358, 1284
BanII	GRGCYC	1 cut(s)	766
BarI	GAAGNNNNNNTAC	2 cut(s)	687, 719
BbrPI	CACGTG	1 cut(s)	800
BbsI	GAAGAC	1 cut(s)	702
Bbv12I	GWGCWC	2 cut(s)	516, 766
BbvI	GCAGC	2 cut(s)	419, 1244
BccI	CCATC	6 cut(s)	319, 439, 830, 866, 870, 979
BceAI	ACGGC	1 cut(s)	1240
BcgI	CGANNNNNNTGC	2 cut(s)	146, 180
BciT130I	CCWGG	2 cut(s)	72, 730
BcnI	CCSGG	3 cut(s)	20, 191, 1252
BcoDI	GTCTC	4 cut(s)	342, 633, 1138, 1345
BfaI	CTAG	3 cut(s)	186, 366, 564
BfoI	RGCGCY	1 cut(s)	389
BfuAI	ACCTGC	3 cut(s)	370, 1172, 1272
BisI	GCNGC	2 cut(s)	433, 1233
BlsI	GCNGC	2 cut(s)	434, 1234
Bme1390I	CCNGG	5 cut(s)	20, 72, 191, 730, 1252
Bme18I	GGWCC	2 cut(s)	120, 638
BmeT110I	CYCGRG	2 cut(s)	578, 765
BmgT120I	GGNCC	5 cut(s)	65, 120, 638, 1226, 1253
BmiI	GGNNCC	5 cut(s)	6, 122, 308, 360, 1286
BmrFI	CCNGG	5 cut(s)	20, 72, 191, 730, 1252
BmsI	GCATC	2 cut(s)	496, 1126
BpiI	GAAGAC	1 cut(s)	702
BpmI	CTGGAG	1 cut(s)	777
Bpu10I	CCTNAGC	1 cut(s)	198
BpuEI	CTTGAG	3 cut(s)	324, 540, 1111
BpuMI	CCSGG	3 cut(s)	20, 191, 1252
Bsa29I	ATCGAT	1 cut(s)	1381
BsaAI	YACGTR	1 cut(s)	800
BsaBI	GATNNNNATC	1 cut(s)	880
BsaHI	GRCGYC	1 cut(s)	1147
BsaI	GGTCTC	1 cut(s)	633
BsaJI	CCNNGG	3 cut(s)	71, 665, 729
BsaXI	ACNNNNNCTCC	4 cut(s)	52, 82, 200, 230
Bsc4I	CCNNNNNNNGG	5 cut(s)	129, 647, 811, 812, 1181
Bse1I	ACTGG	2 cut(s)	67, 1086
Bse3DI	GCAATG	1 cut(s)	1272
Bse8I	GATNNNNATC	1 cut(s)	880
BseBI	CCWGG	2 cut(s)	72, 730
BseCI	ATCGAT	1 cut(s)	1381
BseDI	CCNNGG	3 cut(s)	71, 665, 729
BseGI	GGATG	2 cut(s)	511, 881
BseJI	GATNNNNATC	1 cut(s)	880
BseLI	CCNNNNNNNGG	5 cut(s)	129, 647, 811, 812, 1181
BseMI	GCAATG	1 cut(s)	1272
BseMII	CTCAG	2 cut(s)	219, 314
BseNI	ACTGG	2 cut(s)	67, 1086
BseSI	GKGCMC	4 cut(s)	294, 311, 516, 805
BseXI	GCAGC	2 cut(s)	419, 1244
BseYI	CCCAGC	2 cut(s)	128, 1228
Bsh1236I	CGCG	1 cut(s)	156
BshFI	GGCC	6 cut(s)	66, 775, 857, 1046, 1227, 1255
BshNI	GGYRCC	3 cut(s)	306, 358, 1284
BshVI	ATCGAT	1 cut(s)	1381
BsiHKAI	GWGCWC	2 cut(s)	516, 766
BsiHKCI	CYCGRG	2 cut(s)	578, 765
BsiSI	CCGG	3 cut(s)	20, 190, 1251
BslFI	GGGAC	3 cut(s)	106, 155, 923
BslI	CCNNNNNNNGG	5 cut(s)	129, 647, 811, 812, 1181
BsmAI	GTCTC	4 cut(s)	342, 633, 1138, 1345
BsmBI	CGTCTC	1 cut(s)	1138
BsmFI	GGGAC	3 cut(s)	106, 155, 923
BsmI	GAATGC	1 cut(s)	169
BsnI	GGCC	6 cut(s)	66, 775, 857, 1046, 1227, 1255
Bso31I	GGTCTC	1 cut(s)	633
BsoBI	CYCGRG	2 cut(s)	578, 765
Bsp1286I	GDGCHC	5 cut(s)	294, 311, 516, 766, 805
Bsp1407I	TGTACA	1 cut(s)	48
Bsp143I	GATC	3 cut(s)	566, 650, 896
Bsp68I	TCGCGA	1 cut(s)	156
BspACI	CCGC	3 cut(s)	279, 610, 1179
BspANI	GGCC	6 cut(s)	66, 775, 857, 1046, 1227, 1255
BspCNI	CTCAG	2 cut(s)	220, 313
BspDI	ATCGAT	1 cut(s)	1381
BspFNI	CGCG	1 cut(s)	156
BspHI	TCATGA	1 cut(s)	1321
BspLI	GGNNCC	5 cut(s)	6, 122, 308, 360, 1286
BspMI	ACCTGC	3 cut(s)	370, 1172, 1272
BspPI	GGATC	2 cut(s)	658, 904
BspT107I	GGYRCC	3 cut(s)	306, 358, 1284
BspTNI	GGTCTC	1 cut(s)	633
BsrBI	CCGCTC	1 cut(s)	612
BsrDI	GCAATG	1 cut(s)	1272
BsrGI	TGTACA	1 cut(s)	48
BsrI	ACTGG	2 cut(s)	67, 1086
BssECI	CCNNGG	3 cut(s)	71, 665, 729
BssMI	GATC	3 cut(s)	566, 650, 896
BssNAI	GTATAC	1 cut(s)	704
BssNI	GRCGYC	1 cut(s)	1147
BssT1I	CCWWGG	1 cut(s)	665
Bst1107I	GTATAC	1 cut(s)	704
Bst2UI	CCWGG	2 cut(s)	72, 730
Bst4CI	ACNGT	4 cut(s)	603, 701, 937, 1113
Bst6I	CTCTTC	3 cut(s)	138, 239, 249
BstACI	GRCGYC	1 cut(s)	1147
BstAPI	GCANNNNNTGC	1 cut(s)	276
BstAUI	TGTACA	1 cut(s)	48
BstBAI	YACGTR	1 cut(s)	800
BstC8I	GCNNGC	4 cut(s)	44, 154, 1100, 1104
BstDEI	CTNAG	3 cut(s)	198, 228, 300
BstEII	GGTNACC	1 cut(s)	573
BstF5I	GGATG	2 cut(s)	511, 881
BstFNI	CGCG	1 cut(s)	156
BstH2I	RGCGCY	1 cut(s)	389
BstHHI	GCGC	1 cut(s)	388
BstKTI	GATC	3 cut(s)	569, 653, 899
BstMAI	GTCTC	4 cut(s)	342, 633, 1138, 1345
BstMBI	GATC	3 cut(s)	566, 650, 896
BstMWI	GCNNNNNNNGC	1 cut(s)	276
BstNI	CCWGG	2 cut(s)	72, 730
BstNSI	RCATGY	3 cut(s)	380, 1102, 1106
BstPI	GGTNACC	1 cut(s)	573
BstSCI	CCNGG	5 cut(s)	18, 70, 189, 728, 1250
BstSLI	GKGCMC	4 cut(s)	294, 311, 516, 805
BstUI	CGCG	1 cut(s)	156
BstV1I	GCAGC	2 cut(s)	419, 1244
BstV2I	GAAGAC	1 cut(s)	702
BstX2I	RGATCY	1 cut(s)	896
BstYI	RGATCY	1 cut(s)	896
BstZ17I	GTATAC	1 cut(s)	704
Bsu15I	ATCGAT	1 cut(s)	1381
BsuRI	GGCC	6 cut(s)	66, 775, 857, 1046, 1227, 1255
BsuTUI	ATCGAT	1 cut(s)	1381
BtgZI	GCGATG	1 cut(s)	998
BtsCI	GGATG	2 cut(s)	511, 881
BtsIMutI	CAGTG	3 cut(s)	60, 475, 1118
BtuMI	TCGCGA	1 cut(s)	156
BveI	ACCTGC	3 cut(s)	370, 1172, 1272
Cac8I	GCNNGC	4 cut(s)	44, 154, 1100, 1104
CciI	TCATGA	1 cut(s)	1321
CfoI	GCGC	1 cut(s)	388
Cfr13I	GGNCC	5 cut(s)	65, 120, 638, 1226, 1253
ClaI	ATCGAT	1 cut(s)	1381
CseI	GACGC	1 cut(s)	1334
Csp6I	GTAC	5 cut(s)	49, 58, 359, 970, 1285
CviAII	CATG	8 cut(s)	377, 811, 853, 1072, 1099, 1103, 1322, 1355
CviQI	GTAC	5 cut(s)	49, 58, 359, 970, 1285
DdeI	CTNAG	3 cut(s)	198, 228, 300
DpnI	GATC	3 cut(s)	568, 652, 898
DpnII	GATC	3 cut(s)	566, 650, 896
EaeI	YGGCCR	2 cut(s)	773, 855
Eam1104I	CTCTTC	3 cut(s)	138, 239, 249
EarI	CTCTTC	3 cut(s)	138, 239, 249
Ecl136II	GAGCTC	1 cut(s)	764
Eco130I	CCWWGG	1 cut(s)	665
Eco24I	GRGCYC	1 cut(s)	766
Eco31I	GGTCTC	1 cut(s)	633
Eco47I	GGWCC	2 cut(s)	120, 638
Eco47III	AGCGCT	1 cut(s)	387
Eco53kI	GAGCTC	1 cut(s)	764
Eco57I	CTGAAG	1 cut(s)	1112
Eco72I	CACGTG	1 cut(s)	800
Eco88I	CYCGRG	2 cut(s)	578, 765
Eco91I	GGTNACC	1 cut(s)	573
EcoICRI	GAGCTC	1 cut(s)	764
EcoO109I	RGGNCCY	1 cut(s)	120
EcoO65I	GGTNACC	1 cut(s)	573
EcoRI	GAATTC	1 cut(s)	999
EcoRII	CCWGG	2 cut(s)	70, 728
EcoT14I	CCWWGG	1 cut(s)	665
EcoT22I	ATGCAT	1 cut(s)	1104
EcoT38I	GRGCYC	1 cut(s)	766
ErhI	CCWWGG	1 cut(s)	665
Esp3I	CGTCTC	1 cut(s)	1138
FaeI	CATG	8 cut(s)	380, 814, 856, 1075, 1102, 1106, 1325, 1358
FaqI	GGGAC	3 cut(s)	106, 155, 923
FatI	CATG	8 cut(s)	376, 810, 852, 1071, 1098, 1102, 1321, 1354
FauNDI	CATATG	1 cut(s)	832
FblI	GTMKAC	1 cut(s)	703
Fnu4HI	GCNGC	2 cut(s)	433, 1233
FokI	GGATG	2 cut(s)	518, 888
FriOI	GRGCYC	1 cut(s)	766
Fsp4HI	GCNGC	2 cut(s)	433, 1233
FspBI	CTAG	3 cut(s)	186, 366, 564
GlaI	GCGC	1 cut(s)	387
GluI	GCNGC	2 cut(s)	433, 1233
GsaI	CCCAGC	2 cut(s)	132, 1232
GsuI	CTGGAG	1 cut(s)	777
HaeII	RGCGCY	1 cut(s)	389
HaeIII	GGCC	6 cut(s)	66, 775, 857, 1046, 1227, 1255
HapII	CCGG	3 cut(s)	20, 190, 1251
HgaI	GACGC	1 cut(s)	1334
HhaI	GCGC	1 cut(s)	388
Hin1I	GRCGYC	1 cut(s)	1147
Hin1II	CATG	8 cut(s)	380, 814, 856, 1075, 1102, 1106, 1325, 1358
Hin6I	GCGC	1 cut(s)	386
HinP1I	GCGC	1 cut(s)	386
HincII	GTYRAC	1 cut(s)	1151
HindII	GTYRAC	1 cut(s)	1151
HindIII	AAGCTT	1 cut(s)	744
HinfI	GANTC	4 cut(s)	284, 617, 881, 1271
HpaII	CCGG	3 cut(s)	20, 190, 1251
HphI	GGTGA	3 cut(s)	548, 567, 1346
Hpy166II	GTNNAC	6 cut(s)	60, 514, 539, 599, 704, 1151
Hpy188I	TCNGA	6 cut(s)	136, 616, 849, 886, 901, 1350
Hpy188III	TCNNGA	7 cut(s)	155, 172, 341, 1004, 1040, 1314, 1322
Hpy8I	GTNNAC	6 cut(s)	60, 514, 539, 599, 704, 1151
HpyAV	CCTTC	3 cut(s)	244, 527, 1320
HpyCH4III	ACNGT	4 cut(s)	603, 701, 937, 1113
HpyCH4IV	ACGT	3 cut(s)	706, 799, 1147
HpyCH4V	TGCA	7 cut(s)	270, 435, 514, 718, 907, 1102, 1106
HpyF10VI	GCNNNNNNNGC	1 cut(s)	276
HpyF3I	CTNAG	3 cut(s)	198, 228, 300
HpySE526I	ACGT	3 cut(s)	706, 799, 1147
Hsp92I	GRCGYC	1 cut(s)	1147
Hsp92II	CATG	8 cut(s)	380, 814, 856, 1075, 1102, 1106, 1325, 1358
HspAI	GCGC	1 cut(s)	386
KpnI	GGTACC	2 cut(s)	362, 1288
Kzo9I	GATC	3 cut(s)	566, 650, 896
LmnI	GCTCC	4 cut(s)	323, 761, 988, 1278
Lsp1109I	GCAGC	2 cut(s)	419, 1244
LweI	GCATC	2 cut(s)	496, 1126
MaeI	CTAG	3 cut(s)	186, 366, 564
MaeII	ACGT	3 cut(s)	706, 799, 1147
MaeIII	GTNAC	6 cut(s)	559, 573, 603, 1004, 1193, 1373
MalI	GATC	3 cut(s)	568, 652, 898
MbiI	CCGCTC	1 cut(s)	612
MboI	GATC	3 cut(s)	566, 650, 896
MflI	RGATCY	1 cut(s)	896
MhlI	GDGCHC	5 cut(s)	294, 311, 516, 766, 805
MlsI	TGGCCA	1 cut(s)	857
MluNI	TGGCCA	1 cut(s)	857
Mox20I	TGGCCA	1 cut(s)	857
Mph1103I	ATGCAT	1 cut(s)	1104
MscI	TGGCCA	1 cut(s)	857
MseI	TTAA	3 cut(s)	441, 485, 491
Msp20I	TGGCCA	1 cut(s)	857
MspI	CCGG	3 cut(s)	20, 190, 1251
MspR9I	CCNGG	5 cut(s)	20, 72, 191, 730, 1252
Mva1269I	GAATGC	1 cut(s)	169
MvaI	CCWGG	2 cut(s)	72, 730
MvnI	CGCG	1 cut(s)	156
MwoI	GCNNNNNNNGC	1 cut(s)	276
NciI	CCSGG	3 cut(s)	20, 191, 1252
NdeI	CATATG	1 cut(s)	832
NdeII	GATC	3 cut(s)	566, 650, 896
NlaIII	CATG	8 cut(s)	380, 814, 856, 1075, 1102, 1106, 1325, 1358
NlaIV	GGNNCC	5 cut(s)	6, 122, 308, 360, 1286
NmuCI	GTSAC	3 cut(s)	559, 573, 1004
NruI	TCGCGA	1 cut(s)	156
NsiI	ATGCAT	1 cut(s)	1104
NspI	RCATGY	3 cut(s)	380, 1102, 1106
PaeI	GCATGC	2 cut(s)	1102, 1106
PaeR7I	CTCGAG	1 cut(s)	765
PagI	TCATGA	1 cut(s)	1321
PctI	GAATGC	1 cut(s)	169
PfeI	GAWTC	4 cut(s)	284, 617, 881, 1271
PkrI	GCNGC	2 cut(s)	434, 1234
PmaCI	CACGTG	1 cut(s)	800
PmlI	CACGTG	1 cut(s)	800
Ppu21I	YACGTR	1 cut(s)	800
PpuMI	RGGWCCY	1 cut(s)	120
Psp124BI	GAGCTC	1 cut(s)	766
Psp5II	RGGWCCY	1 cut(s)	120
Psp6I	CCWGG	2 cut(s)	70, 728
PspCI	CACGTG	1 cut(s)	800
PspEI	GGTNACC	1 cut(s)	573
PspFI	CCCAGC	2 cut(s)	128, 1228
PspGI	CCWGG	2 cut(s)	70, 728
PspN4I	GGNNCC	5 cut(s)	6, 122, 308, 360, 1286
PspPI	GGNCC	5 cut(s)	65, 120, 638, 1226, 1253
PspPPI	RGGWCCY	1 cut(s)	120
PspXI	VCTCGAGB	1 cut(s)	765
PsuI	RGATCY	1 cut(s)	896
RruI	TCGCGA	1 cut(s)	156
RsaI	GTAC	5 cut(s)	50, 59, 360, 971, 1286
RsaNI	GTAC	5 cut(s)	49, 58, 359, 970, 1285
SacI	GAGCTC	1 cut(s)	766
SaqAI	TTAA	3 cut(s)	441, 485, 491
SatI	GCNGC	2 cut(s)	433, 1233
Sau3AI	GATC	3 cut(s)	566, 650, 896
Sau96I	GGNCC	5 cut(s)	65, 120, 638, 1226, 1253
ScrFI	CCNGG	5 cut(s)	20, 72, 191, 730, 1252
SduI	GDGCHC	5 cut(s)	294, 311, 516, 766, 805
SfaNI	GCATC	2 cut(s)	496, 1126
Sfr274I	CTCGAG	1 cut(s)	765
SinI	GGWCC	2 cut(s)	120, 638
SlaI	CTCGAG	1 cut(s)	765
SmlI	CTYRAG	4 cut(s)	339, 555, 765, 1090
SmoI	CTYRAG	4 cut(s)	339, 555, 765, 1090
SphI	GCATGC	2 cut(s)	1102, 1106
SsiI	CCGC	3 cut(s)	279, 610, 1179
SspI	AATATT	2 cut(s)	439, 489
SspMI	CTAG	3 cut(s)	186, 366, 564
SstI	GAGCTC	1 cut(s)	766
StyD4I	CCNGG	5 cut(s)	18, 70, 189, 728, 1250
StyI	CCWWGG	1 cut(s)	665
TaaI	ACNGT	4 cut(s)	603, 701, 937, 1113
TaiI	ACGT	3 cut(s)	709, 802, 1150
TaqI	TCGA	2 cut(s)	766, 1381
TatI	WGTACW	3 cut(s)	48, 57, 969
TfiI	GAWTC	4 cut(s)	284, 617, 881, 1271
Tru1I	TTAA	3 cut(s)	441, 485, 491
Tru9I	TTAA	3 cut(s)	441, 485, 491
TscAI	CASTG	3 cut(s)	67, 475, 1118
TseFI	GTSAC	3 cut(s)	559, 573, 1004
TseI	GCWGC	2 cut(s)	432, 1232
Tsp45I	GTSAC	3 cut(s)	559, 573, 1004
TspDTI	ATGAA	4 cut(s)	448, 819, 1035, 1088
TspGWI	ACGGA	1 cut(s)	774
TspRI	CASTG	3 cut(s)	67, 475, 1118
VneI	GTGCAC	1 cut(s)	512
VpaK11BI	GGWCC	2 cut(s)	120, 638
XapI	RAATTY	5 cut(s)	455, 722, 787, 999, 1120
XceI	RCATGY	3 cut(s)	380, 1102, 1106
XhoI	CTCGAG	1 cut(s)	765
XmiI	GTMKAC	1 cut(s)	703
XspI	CTAG	3 cut(s)	186, 366, 564
ZraI	GACGTC	1 cut(s)	1148
Zsp2I	ATGCAT	1 cut(s)	1104

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.