No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g28880 FvH4_1g29111 FvH4_1g29422 FvH4_3g26312 FvH4_3g30613 FvH4_3g37082 FvH4_6g20922 |
| rosa_chinensis | RchiOBHm_Chr6g0267751 |
| rosa_laevigata | RLG00000001633 RLG00000009125 RLG00000009185 RLG00000013920 RLG00000029463 RLG00000035008 |
| rosa_multiflora | Rmu_sc0000725.1_g000014 Rmu_sc0007681.1_g000006 Rmu_sc0008058.1_g000006 Rmu_ssc0000146.1_g000011 |
| rosa_roxburghii | Rroxscaffold_3G00236910 Rroxscaffold_4G00328890 Rroxscaffold_5G00347550 Rroxscaffold_7G00199890 |
| rosa_rugosa | Rorug03G0294400 Rorug04G0032500 Rorug07G0164400 Rorug07G0242300 |
| rosa_samantha | Rh1AG092000 Rh1AG092100 Rh1CG089000 Rh1CG089100 Rh4AG132600 Rh4BG108900 Rh4CG140300 Rh4DG100900 Rh4DG101000 Rh4DG109200 Rh6BG164600 Rh6DG150300 Rh6DG150400 Rh7AG351300 Rh7BG377400 Rh7BG408800 Rh7CG332900 Rh7CG368600 Rh7DG348100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1680 |
| AatII | GACGTC | 1 cut(s) | 1684 |
| Acc16I | TGCGCA | 1 cut(s) | 717 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 79 |
| AccI | GTMKAC | 1 cut(s) | 2271 |
| AccII | CGCG | 5 cut(s) | 369, 518, 807, 1264, 1672 |
| AccIII | TCCGGA | 1 cut(s) | 139 |
| AclI | AACGTT | 1 cut(s) | 662 |
| AclWI | GGATC | 7 cut(s) | 150, 152, 807, 820, 1933, 2036, 2064 |
| AcoI | YGGCCR | 2 cut(s) | 454, 1731 |
| AcsI | RAATTY | 6 cut(s) | 704, 939, 1666, 1718, 1910, 1994 |
| AcuI | CTGAAG | 2 cut(s) | 266, 1457 |
| AcyI | GRCGYC | 2 cut(s) | 5, 1681 |
| AfaI | GTAC | 3 cut(s) | 1291, 1465, 1956 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 79, 168, 485, 749, 1103, 1205, 1404, 2044 |
| AflIII | ACRYGT | 2 cut(s) | 678, 787 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1104 |
| AjnI | CCWGG | 2 cut(s) | 494, 1526 |
| AluBI | AGCT | 7 cut(s) | 281, 546, 1079, 1142, 1217, 1511, 1549 |
| AluI | AGCT | 7 cut(s) | 281, 546, 1079, 1142, 1217, 1511, 1549 |
| Alw21I | GWGCWC | 2 cut(s) | 1608, 2131 |
| Alw26I | GTCTC | 3 cut(s) | 1033, 1304, 1536 |
| AlwI | GGATC | 7 cut(s) | 150, 152, 807, 820, 1933, 2036, 2064 |
| Ama87I | CYCGRG | 1 cut(s) | 541 |
| Aor13HI | TCCGGA | 1 cut(s) | 139 |
| AoxI | GGCC | 6 cut(s) | 239, 454, 1542, 1694, 1731, 2077 |
| ApaI | GGGCCC | 1 cut(s) | 1698 |
| ApeKI | GCWGC | 1 cut(s) | 2205 |
| ApoI | RAATTY | 6 cut(s) | 704, 939, 1666, 1718, 1910, 1994 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2126, 2158 |
| AseI | ATTAAT | 1 cut(s) | 1452 |
| AspLEI | GCGC | 4 cut(s) | 135, 501, 718, 2190 |
| AspS9I | GGNCC | 4 cut(s) | 1694, 1695, 2077, 2252 |
| AsuC2I | CCSGG | 2 cut(s) | 1406, 2045 |
| AsuHPI | GGTGA | 1 cut(s) | 1888 |
| AsuII | TTCGAA | 1 cut(s) | 1722 |
| AsuNHI | GCTAGC | 1 cut(s) | 1213 |
| AvaI | CYCGRG | 1 cut(s) | 541 |
| AvaII | GGWCC | 1 cut(s) | 2252 |
| AxyI | CCTNAGG | 2 cut(s) | 1791, 2119 |
| BaeGI | GKGCMC | 1 cut(s) | 1698 |
| BalI | TGGCCA | 2 cut(s) | 456, 1733 |
| BamHI | GGATCC | 1 cut(s) | 812 |
| BanII | GRGCYC | 2 cut(s) | 1698, 1744 |
| BauI | CACGAG | 1 cut(s) | 1329 |
| BbsI | GAAGAC | 1 cut(s) | 675 |
| Bbv12I | GWGCWC | 2 cut(s) | 1608, 2131 |
| BbvI | GCAGC | 1 cut(s) | 2217 |
| BccI | CCATC | 5 cut(s) | 50, 81, 465, 1723, 1816 |
| BceAI | ACGGC | 1 cut(s) | 1416 |
| BciT130I | CCWGG | 2 cut(s) | 496, 1528 |
| BcnI | CCSGG | 2 cut(s) | 1406, 2045 |
| BcoDI | GTCTC | 3 cut(s) | 1033, 1304, 1536 |
| BfaI | CTAG | 7 cut(s) | 9, 39, 504, 525, 726, 1214, 1418 |
| BfmI | CTRYAG | 1 cut(s) | 1272 |
| BfoI | RGCGCY | 2 cut(s) | 136, 502 |
| BglII | AGATCT | 1 cut(s) | 1498 |
| BisI | GCNGC | 1 cut(s) | 2206 |
| BlpI | GCTNAGC | 1 cut(s) | 1507 |
| BlsI | GCNGC | 1 cut(s) | 2207 |
| Bme1390I | CCNGG | 4 cut(s) | 496, 1406, 1528, 2045 |
| Bme18I | GGWCC | 1 cut(s) | 2252 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1104 |
| BmeT110I | CYCGRG | 1 cut(s) | 541 |
| BmgT120I | GGNCC | 4 cut(s) | 1694, 1695, 2077, 2252 |
| BmiI | GGNNCC | 2 cut(s) | 814, 1696 |
| BmrFI | CCNGG | 4 cut(s) | 496, 1406, 1528, 2045 |
| BmrI | ACTGGG | 1 cut(s) | 1738 |
| BmsI | GCATC | 6 cut(s) | 165, 958, 1285, 1850, 1902, 2225 |
| BmtI | GCTAGC | 1 cut(s) | 1217 |
| BmuI | ACTGGG | 1 cut(s) | 1738 |
| BpiI | GAAGAC | 1 cut(s) | 675 |
| BpmI | CTGGAG | 2 cut(s) | 1128, 1203 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1507 |
| Bpu14I | TTCGAA | 1 cut(s) | 1722 |
| BpuEI | CTTGAG | 3 cut(s) | 446, 1538, 1592 |
| BpuMI | CCSGG | 2 cut(s) | 1406, 2045 |
| BsaHI | GRCGYC | 2 cut(s) | 5, 1681 |
| BsaI | GGTCTC | 1 cut(s) | 1536 |
| BsaJI | CCNNGG | 2 cut(s) | 421, 2073 |
| BsaWI | WCCGGW | 3 cut(s) | 139, 691, 1959 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1608, 1638, 2157, 2187, 2232, 2262 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 79, 168, 485, 749, 1103, 1205, 1404, 2044 |
| Bse1I | ACTGG | 3 cut(s) | 1047, 1145, 1744 |
| Bse21I | CCTNAGG | 2 cut(s) | 1791, 2119 |
| Bse3DI | GCAATG | 2 cut(s) | 415, 2183 |
| BseAI | TCCGGA | 1 cut(s) | 139 |
| BseBI | CCWGG | 2 cut(s) | 496, 1528 |
| BseDI | CCNNGG | 2 cut(s) | 421, 2073 |
| BseGI | GGATG | 6 cut(s) | 180, 720, 901, 1256, 1734, 1933 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 79, 168, 485, 749, 1103, 1205, 1404, 2044 |
| BseMI | GCAATG | 2 cut(s) | 415, 2183 |
| BseMII | CTCAG | 4 cut(s) | 120, 1521, 1782, 1868 |
| BseNI | ACTGG | 3 cut(s) | 1047, 1145, 1744 |
| BseRI | GAGGAG | 1 cut(s) | 1997 |
| BseSI | GKGCMC | 1 cut(s) | 1698 |
| BseXI | GCAGC | 1 cut(s) | 2217 |
| Bsh1236I | CGCG | 5 cut(s) | 369, 518, 807, 1264, 1672 |
| Bsh1285I | CGRYCG | 2 cut(s) | 600, 1177 |
| BshFI | GGCC | 6 cut(s) | 241, 456, 1544, 1696, 1733, 2079 |
| BsiEI | CGRYCG | 2 cut(s) | 600, 1177 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1608, 2131 |
| BsiHKCI | CYCGRG | 1 cut(s) | 541 |
| BsiSI | CCGG | 5 cut(s) | 140, 692, 1405, 1960, 2045 |
| BslFI | GGGAC | 5 cut(s) | 127, 439, 932, 1079, 2194 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 79, 168, 485, 749, 1103, 1205, 1404, 2044 |
| BsmAI | GTCTC | 3 cut(s) | 1033, 1304, 1536 |
| BsmFI | GGGAC | 5 cut(s) | 127, 439, 932, 1079, 2194 |
| BsnI | GGCC | 6 cut(s) | 241, 456, 1544, 1696, 1733, 2079 |
| Bso31I | GGTCTC | 1 cut(s) | 1536 |
| BsoBI | CYCGRG | 1 cut(s) | 541 |
| Bsp119I | TTCGAA | 1 cut(s) | 1722 |
| Bsp120I | GGGCCC | 1 cut(s) | 1694 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1608, 1698, 1744, 2131 |
| Bsp13I | TCCGGA | 1 cut(s) | 139 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1507 |
| Bsp19I | CCATGG | 1 cut(s) | 2073 |
| Bsp68I | TCGCGA | 2 cut(s) | 807, 1672 |
| BspANI | GGCC | 6 cut(s) | 241, 456, 1544, 1696, 1733, 2079 |
| BspCNI | CTCAG | 4 cut(s) | 119, 1520, 1783, 1867 |
| BspEI | TCCGGA | 1 cut(s) | 139 |
| BspFNI | CGCG | 5 cut(s) | 369, 518, 807, 1264, 1672 |
| BspLI | GGNNCC | 2 cut(s) | 814, 1696 |
| BspOI | GCTAGC | 1 cut(s) | 1217 |
| BspPI | GGATC | 7 cut(s) | 150, 152, 807, 820, 1933, 2036, 2064 |
| BspQI | GCTCTTC | 2 cut(s) | 496, 1883 |
| BspT104I | TTCGAA | 1 cut(s) | 1722 |
| BspTNI | GGTCTC | 1 cut(s) | 1536 |
| BsrDI | GCAATG | 2 cut(s) | 415, 2183 |
| BsrI | ACTGG | 3 cut(s) | 1047, 1145, 1744 |
| BssECI | CCNNGG | 2 cut(s) | 421, 2073 |
| BssNI | GRCGYC | 2 cut(s) | 5, 1681 |
| BssSI | CACGAG | 1 cut(s) | 1329 |
| BssT1I | CCWWGG | 2 cut(s) | 421, 2073 |
| Bst2BI | CACGAG | 1 cut(s) | 1329 |
| Bst2UI | CCWGG | 2 cut(s) | 496, 1528 |
| Bst4CI | ACNGT | 5 cut(s) | 210, 430, 1354, 1900, 2218 |
| Bst6I | CTCTTC | 4 cut(s) | 496, 1280, 1533, 1883 |
| BstACI | GRCGYC | 2 cut(s) | 5, 1681 |
| BstBI | TTCGAA | 1 cut(s) | 1722 |
| BstC8I | GCNNGC | 6 cut(s) | 349, 714, 805, 973, 1215, 1740 |
| BstDEI | CTNAG | 7 cut(s) | 86, 106, 1507, 1791, 1854, 2060, 2119 |
| BstDSI | CCRYGG | 1 cut(s) | 2073 |
| BstF5I | GGATG | 6 cut(s) | 180, 720, 901, 1256, 1734, 1933 |
| BstFNI | CGCG | 5 cut(s) | 369, 518, 807, 1264, 1672 |
| BstH2I | RGCGCY | 2 cut(s) | 136, 502 |
| BstHHI | GCGC | 4 cut(s) | 135, 501, 718, 2190 |
| BstMAI | GTCTC | 3 cut(s) | 1033, 1304, 1536 |
| BstMCI | CGRYCG | 2 cut(s) | 600, 1177 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 842, 1210, 1693, 1739 |
| BstNI | CCWGG | 2 cut(s) | 496, 1528 |
| BstNSI | RCATGY | 4 cut(s) | 682, 791, 1025, 1046 |
| BstSCI | CCNGG | 4 cut(s) | 494, 1404, 1526, 2043 |
| BstSFI | CTRYAG | 1 cut(s) | 1272 |
| BstSLI | GKGCMC | 1 cut(s) | 1698 |
| BstUI | CGCG | 5 cut(s) | 369, 518, 807, 1264, 1672 |
| BstV1I | GCAGC | 1 cut(s) | 2217 |
| BstV2I | GAAGAC | 1 cut(s) | 675 |
| BstX2I | RGATCY | 5 cut(s) | 157, 812, 1498, 1938, 2056 |
| BstYI | RGATCY | 5 cut(s) | 157, 812, 1498, 1938, 2056 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1791, 2119 |
| BsuRI | GGCC | 6 cut(s) | 241, 456, 1544, 1696, 1733, 2079 |
| BtgI | CCRYGG | 1 cut(s) | 2073 |
| BtgZI | GCGATG | 1 cut(s) | 59 |
| BtsCI | GGATG | 6 cut(s) | 180, 720, 901, 1256, 1734, 1933 |
| BtsI | GCAGTG | 1 cut(s) | 956 |
| BtsIMutI | CAGTG | 2 cut(s) | 956, 1054 |
| BtuMI | TCGCGA | 2 cut(s) | 807, 1672 |
| Cac8I | GCNNGC | 6 cut(s) | 349, 714, 805, 973, 1215, 1740 |
| CfoI | GCGC | 4 cut(s) | 135, 501, 718, 2190 |
| Cfr13I | GGNCC | 4 cut(s) | 1694, 1695, 2077, 2252 |
| CseI | GACGC | 1 cut(s) | 358 |
| Csp6I | GTAC | 3 cut(s) | 1290, 1464, 1955 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1852, 1887 |
| CviAII | CATG | 9 cut(s) | 98, 679, 788, 1022, 1043, 1167, 1924, 1943, 2074 |
| CviQI | GTAC | 3 cut(s) | 1290, 1464, 1955 |
| DdeI | CTNAG | 7 cut(s) | 86, 106, 1507, 1791, 1854, 2060, 2119 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1680 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1104 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1680 |
| EaeI | YGGCCR | 2 cut(s) | 454, 1731 |
| Eam1104I | CTCTTC | 4 cut(s) | 496, 1280, 1533, 1883 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1104 |
| EarI | CTCTTC | 4 cut(s) | 496, 1280, 1533, 1883 |
| EciI | GGCGGA | 1 cut(s) | 768 |
| Eco130I | CCWWGG | 2 cut(s) | 421, 2073 |
| Eco24I | GRGCYC | 2 cut(s) | 1698, 1744 |
| Eco31I | GGTCTC | 1 cut(s) | 1536 |
| Eco32I | GATATC | 1 cut(s) | 1832 |
| Eco47I | GGWCC | 1 cut(s) | 2252 |
| Eco57I | CTGAAG | 2 cut(s) | 266, 1457 |
| Eco81I | CCTNAGG | 2 cut(s) | 1791, 2119 |
| Eco88I | CYCGRG | 1 cut(s) | 541 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1694 |
| EcoRI | GAATTC | 3 cut(s) | 1666, 1910, 1994 |
| EcoRII | CCWGG | 2 cut(s) | 494, 1526 |
| EcoRV | GATATC | 1 cut(s) | 1832 |
| EcoT14I | CCWWGG | 2 cut(s) | 421, 2073 |
| EcoT38I | GRGCYC | 2 cut(s) | 1698, 1744 |
| ErhI | CCWWGG | 2 cut(s) | 421, 2073 |
| FaeI | CATG | 9 cut(s) | 101, 682, 791, 1025, 1046, 1170, 1927, 1946, 2077 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1818, 1850 |
| FaqI | GGGAC | 5 cut(s) | 127, 439, 932, 1079, 2194 |
| FatI | CATG | 9 cut(s) | 97, 678, 787, 1021, 1042, 1166, 1923, 1942, 2073 |
| FauI | CCCGC | 4 cut(s) | 103, 340, 438, 1605 |
| FblI | GTMKAC | 1 cut(s) | 2271 |
| Fnu4HI | GCNGC | 1 cut(s) | 2206 |
| FokI | GGATG | 6 cut(s) | 187, 707, 908, 1243, 1741, 1940 |
| FriOI | GRGCYC | 2 cut(s) | 1698, 1744 |
| Fsp4HI | GCNGC | 1 cut(s) | 2206 |
| FspBI | CTAG | 7 cut(s) | 9, 39, 504, 525, 726, 1214, 1418 |
| FspI | TGCGCA | 1 cut(s) | 717 |
| GlaI | GCGC | 4 cut(s) | 134, 500, 717, 2189 |
| GluI | GCNGC | 1 cut(s) | 2206 |
| GsuI | CTGGAG | 2 cut(s) | 1128, 1203 |
| HaeII | RGCGCY | 2 cut(s) | 136, 502 |
| HaeIII | GGCC | 6 cut(s) | 241, 456, 1544, 1696, 1733, 2079 |
| HapII | CCGG | 5 cut(s) | 140, 692, 1405, 1960, 2045 |
| HgaI | GACGC | 1 cut(s) | 358 |
| HhaI | GCGC | 4 cut(s) | 135, 501, 718, 2190 |
| Hin1I | GRCGYC | 2 cut(s) | 5, 1681 |
| Hin1II | CATG | 9 cut(s) | 101, 682, 791, 1025, 1046, 1170, 1927, 1946, 2077 |
| Hin6I | GCGC | 4 cut(s) | 133, 499, 716, 2188 |
| HinP1I | GCGC | 4 cut(s) | 133, 499, 716, 2188 |
| HindIII | AAGCTT | 2 cut(s) | 1077, 1547 |
| HpaII | CCGG | 5 cut(s) | 140, 692, 1405, 1960, 2045 |
| HphI | GGTGA | 1 cut(s) | 1888 |
| Hpy166II | GTNNAC | 3 cut(s) | 197, 433, 2272 |
| Hpy8I | GTNNAC | 3 cut(s) | 197, 433, 2272 |
| Hpy99I | CGWCG | 6 cut(s) | 374, 798, 1102, 1204, 1683, 1955 |
| HpyCH4III | ACNGT | 5 cut(s) | 210, 430, 1354, 1900, 2218 |
| HpyCH4IV | ACGT | 2 cut(s) | 662, 1681 |
| HpyCH4V | TGCA | 6 cut(s) | 627, 641, 1306, 1841, 2161, 2213 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 842, 1210, 1693, 1739 |
| HpyF3I | CTNAG | 7 cut(s) | 86, 106, 1507, 1791, 1854, 2060, 2119 |
| HpySE526I | ACGT | 2 cut(s) | 662, 1681 |
| Hsp92I | GRCGYC | 2 cut(s) | 5, 1681 |
| Hsp92II | CATG | 9 cut(s) | 101, 682, 791, 1025, 1046, 1170, 1927, 1946, 2077 |
| HspAI | GCGC | 4 cut(s) | 133, 499, 716, 2188 |
| Kpn2I | TCCGGA | 1 cut(s) | 139 |
| LguI | GCTCTTC | 2 cut(s) | 496, 1883 |
| LmnI | GCTCC | 4 cut(s) | 1147, 1222, 1762, 2134 |
| Lsp1109I | GCAGC | 1 cut(s) | 2217 |
| LweI | GCATC | 6 cut(s) | 165, 958, 1285, 1850, 1902, 2225 |
| MaeI | CTAG | 7 cut(s) | 9, 39, 504, 525, 726, 1214, 1418 |
| MaeII | ACGT | 2 cut(s) | 662, 1681 |
| MaeIII | GTNAC | 4 cut(s) | 579, 1169, 1190, 1859 |
| MfeI | CAATTG | 3 cut(s) | 818, 1301, 1553 |
| MflI | RGATCY | 5 cut(s) | 157, 812, 1498, 1938, 2056 |
| MhlI | GDGCHC | 4 cut(s) | 1608, 1698, 1744, 2131 |
| MlsI | TGGCCA | 2 cut(s) | 456, 1733 |
| MluNI | TGGCCA | 2 cut(s) | 456, 1733 |
| MlyI | GAGTC | 5 cut(s) | 433, 533, 1487, 1994, 2104 |
| Mox20I | TGGCCA | 2 cut(s) | 456, 1733 |
| MroI | TCCGGA | 1 cut(s) | 139 |
| MscI | TGGCCA | 2 cut(s) | 456, 1733 |
| MseI | TTAA | 6 cut(s) | 309, 777, 857, 1248, 1452, 1775 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1047, 1811 |
| Msp20I | TGGCCA | 2 cut(s) | 456, 1733 |
| MspA1I | CMGCKG | 3 cut(s) | 110, 1223, 2208 |
| MspI | CCGG | 5 cut(s) | 140, 692, 1405, 1960, 2045 |
| MspR9I | CCNGG | 4 cut(s) | 496, 1406, 1528, 2045 |
| MunI | CAATTG | 3 cut(s) | 818, 1301, 1553 |
| MvaI | CCWGG | 2 cut(s) | 496, 1528 |
| MvnI | CGCG | 5 cut(s) | 369, 518, 807, 1264, 1672 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 842, 1210, 1693, 1739 |
| NciI | CCSGG | 2 cut(s) | 1406, 2045 |
| NcoI | CCATGG | 1 cut(s) | 2073 |
| NheI | GCTAGC | 1 cut(s) | 1213 |
| NlaIII | CATG | 9 cut(s) | 101, 682, 791, 1025, 1046, 1170, 1927, 1946, 2077 |
| NlaIV | GGNNCC | 2 cut(s) | 814, 1696 |
| NmuCI | GTSAC | 3 cut(s) | 1169, 1190, 1859 |
| NruI | TCGCGA | 2 cut(s) | 807, 1672 |
| NsbI | TGCGCA | 1 cut(s) | 717 |
| NspI | RCATGY | 4 cut(s) | 682, 791, 1025, 1046 |
| NspV | TTCGAA | 1 cut(s) | 1722 |
| PaeR7I | CTCGAG | 1 cut(s) | 541 |
| PciI | ACATGT | 2 cut(s) | 678, 787 |
| PciSI | GCTCTTC | 2 cut(s) | 496, 1883 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1998 |
| PfeI | GAWTC | 5 cut(s) | 449, 798, 878, 910, 1628 |
| PflFI | GACNNNGTC | 1 cut(s) | 1949 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 79 |
| PkrI | GCNGC | 1 cut(s) | 2207 |
| Ple19I | CGATCG | 2 cut(s) | 600, 1177 |
| PleI | GAGTC | 5 cut(s) | 433, 533, 1486, 1993, 2103 |
| PpsI | GAGTC | 5 cut(s) | 433, 533, 1486, 1993, 2103 |
| PscI | ACATGT | 2 cut(s) | 678, 787 |
| PshBI | ATTAAT | 1 cut(s) | 1452 |
| Psp1406I | AACGTT | 1 cut(s) | 662 |
| Psp6I | CCWGG | 2 cut(s) | 494, 1526 |
| PspGI | CCWGG | 2 cut(s) | 494, 1526 |
| PspN4I | GGNNCC | 2 cut(s) | 814, 1696 |
| PspOMI | GGGCCC | 1 cut(s) | 1694 |
| PspPI | GGNCC | 4 cut(s) | 1694, 1695, 2077, 2252 |
| PspXI | VCTCGAGB | 1 cut(s) | 541 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 147, 179 |
| PsuI | RGATCY | 5 cut(s) | 157, 812, 1498, 1938, 2056 |
| PsyI | GACNNNGTC | 1 cut(s) | 1949 |
| PvuI | CGATCG | 2 cut(s) | 600, 1177 |
| RruI | TCGCGA | 2 cut(s) | 807, 1672 |
| RsaI | GTAC | 3 cut(s) | 1291, 1465, 1956 |
| RsaNI | GTAC | 3 cut(s) | 1290, 1464, 1955 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1047, 1811 |
| SapI | GCTCTTC | 2 cut(s) | 496, 1883 |
| SaqAI | TTAA | 6 cut(s) | 309, 777, 857, 1248, 1452, 1775 |
| SatI | GCNGC | 1 cut(s) | 2206 |
| Sau96I | GGNCC | 4 cut(s) | 1694, 1695, 2077, 2252 |
| SchI | GAGTC | 5 cut(s) | 433, 533, 1487, 1994, 2104 |
| ScrFI | CCNGG | 4 cut(s) | 496, 1406, 1528, 2045 |
| SduI | GDGCHC | 4 cut(s) | 1608, 1698, 1744, 2131 |
| SfaNI | GCATC | 6 cut(s) | 165, 958, 1285, 1850, 1902, 2225 |
| SfcI | CTRYAG | 1 cut(s) | 1272 |
| Sfr274I | CTCGAG | 1 cut(s) | 541 |
| SfuI | TTCGAA | 1 cut(s) | 1722 |
| SinI | GGWCC | 1 cut(s) | 2252 |
| SlaI | CTCGAG | 1 cut(s) | 541 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1047, 1811 |
| SmlI | CTYRAG | 4 cut(s) | 461, 541, 1517, 1607 |
| SmoI | CTYRAG | 4 cut(s) | 461, 541, 1517, 1607 |
| SspI | AATATT | 1 cut(s) | 401 |
| SspMI | CTAG | 7 cut(s) | 9, 39, 504, 525, 726, 1214, 1418 |
| StyD4I | CCNGG | 4 cut(s) | 494, 1404, 1526, 2043 |
| StyI | CCWWGG | 2 cut(s) | 421, 2073 |
| TaaI | ACNGT | 5 cut(s) | 210, 430, 1354, 1900, 2218 |
| TaiI | ACGT | 2 cut(s) | 665, 1684 |
| TaqII | GACCGA | 1 cut(s) | 2240 |
| TatI | WGTACW | 1 cut(s) | 1289 |
| TfiI | GAWTC | 5 cut(s) | 449, 798, 878, 910, 1628 |
| Tru1I | TTAA | 6 cut(s) | 309, 777, 857, 1248, 1452, 1775 |
| Tru9I | TTAA | 6 cut(s) | 309, 777, 857, 1248, 1452, 1775 |
| TscAI | CASTG | 2 cut(s) | 963, 1054 |
| TseFI | GTSAC | 3 cut(s) | 1169, 1190, 1859 |
| TseI | GCWGC | 1 cut(s) | 2205 |
| Tsp45I | GTSAC | 3 cut(s) | 1169, 1190, 1859 |
| TspDTI | ATGAA | 7 cut(s) | 114, 242, 837, 1155, 1391, 1718, 2118 |
| TspGWI | ACGGA | 3 cut(s) | 182, 1115, 1741 |
| TspRI | CASTG | 2 cut(s) | 963, 1054 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1949 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 79 |
| VpaK11BI | GGWCC | 1 cut(s) | 2252 |
| VspI | ATTAAT | 1 cut(s) | 1452 |
| XapI | RAATTY | 6 cut(s) | 704, 939, 1666, 1718, 1910, 1994 |
| XceI | RCATGY | 4 cut(s) | 682, 791, 1025, 1046 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 268, 694 |
| XhoI | CTCGAG | 1 cut(s) | 541 |
| XmiI | GTMKAC | 1 cut(s) | 2271 |
| XspI | CTAG | 7 cut(s) | 9, 39, 504, 525, 726, 1214, 1418 |
| ZraI | GACGTC | 1 cut(s) | 1682 |