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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g28880 FvH4_1g29111 FvH4_1g29422 FvH4_3g26312 FvH4_3g30613 FvH4_3g37082 FvH4_6g20922 |
| rosa_chinensis | RchiOBHm_Chr6g0267751 |
| rosa_laevigata | RLG00000001633 RLG00000009125 RLG00000009185 RLG00000013920 RLG00000029463 RLG00000035008 |
| rosa_multiflora | Rmu_sc0000725.1_g000014 Rmu_sc0007681.1_g000006 Rmu_sc0008058.1_g000006 Rmu_ssc0000146.1_g000011 |
| rosa_roxburghii | Rroxscaffold_3G00236910 Rroxscaffold_4G00328890 Rroxscaffold_5G00347550 Rroxscaffold_7G00199890 |
| rosa_rugosa | Rorug03G0294400 Rorug04G0032500 Rorug07G0164400 Rorug07G0242300 |
| rosa_samantha | Rh1AG092000 Rh1AG092100 Rh1CG089000 Rh1CG089100 Rh4AG132600 Rh4BG108900 Rh4CG140300 Rh4DG100900 Rh4DG101000 Rh4DG109200 Rh6BG164600 Rh6DG150300 Rh6DG150400 Rh7AG351300 Rh7BG377400 Rh7BG408800 Rh7CG332900 Rh7CG368600 Rh7DG348100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 555 |
| AccBSI | CCGCTC | 1 cut(s) | 431 |
| AccII | CGCG | 1 cut(s) | 1248 |
| AccIII | TCCGGA | 1 cut(s) | 1630 |
| AciI | CCGC | 7 cut(s) | 189, 429, 635, 802, 983, 1246, 1579 |
| AclWI | GGATC | 9 cut(s) | 121, 150, 152, 1025, 1118, 1126, 1317, 1365, 1622 |
| AcoI | YGGCCR | 1 cut(s) | 15 |
| AcsI | RAATTY | 4 cut(s) | 343, 768, 1507, 1559 |
| AcuI | CTGAAG | 1 cut(s) | 1334 |
| AfaI | GTAC | 4 cut(s) | 266, 427, 1103, 1499 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 79, 740 |
| AflII | CTTAAG | 1 cut(s) | 1091 |
| AjnI | CCWGG | 2 cut(s) | 472, 1464 |
| AluBI | AGCT | 6 cut(s) | 70, 85, 1144, 1169, 1574, 1731 |
| AluI | AGCT | 6 cut(s) | 70, 85, 1144, 1169, 1574, 1731 |
| Alw21I | GWGCWC | 1 cut(s) | 72 |
| Alw26I | GTCTC | 5 cut(s) | 332, 337, 614, 1184, 1444 |
| AlwI | GGATC | 9 cut(s) | 121, 150, 152, 1025, 1118, 1126, 1317, 1365, 1622 |
| Ama87I | CYCGRG | 3 cut(s) | 63, 334, 369 |
| Aor13HI | TCCGGA | 1 cut(s) | 1630 |
| AoxI | GGCC | 2 cut(s) | 15, 763 |
| ApeKI | GCWGC | 2 cut(s) | 59, 1238 |
| ApoI | RAATTY | 4 cut(s) | 343, 768, 1507, 1559 |
| AseI | ATTAAT | 1 cut(s) | 195 |
| AspLEI | GCGC | 2 cut(s) | 556, 1552 |
| AspS9I | GGNCC | 2 cut(s) | 648, 1535 |
| AsuHPI | GGTGA | 2 cut(s) | 547, 1378 |
| AvaI | CYCGRG | 3 cut(s) | 63, 334, 369 |
| AvaII | GGWCC | 2 cut(s) | 648, 1535 |
| BanII | GRGCYC | 1 cut(s) | 72 |
| BauI | CACGAG | 4 cut(s) | 432, 613, 1170, 1523 |
| BbsI | GAAGAC | 2 cut(s) | 704, 915 |
| Bbv12I | GWGCWC | 1 cut(s) | 72 |
| BbvI | GCAGC | 2 cut(s) | 46, 1225 |
| BccI | CCATC | 1 cut(s) | 787 |
| BciT130I | CCWGG | 2 cut(s) | 474, 1466 |
| BcoDI | GTCTC | 5 cut(s) | 332, 337, 614, 1184, 1444 |
| BfaI | CTAG | 6 cut(s) | 98, 213, 467, 608, 1166, 1376 |
| BfrI | CTTAAG | 1 cut(s) | 1091 |
| BglII | AGATCT | 2 cut(s) | 463, 1339 |
| BisI | GCNGC | 4 cut(s) | 60, 984, 1239, 1246 |
| BlpI | GCTNAGC | 1 cut(s) | 1575 |
| BlsI | GCNGC | 4 cut(s) | 61, 985, 1240, 1247 |
| Bme1390I | CCNGG | 2 cut(s) | 474, 1466 |
| Bme18I | GGWCC | 2 cut(s) | 648, 1535 |
| BmeT110I | CYCGRG | 3 cut(s) | 63, 334, 369 |
| BmgT120I | GGNCC | 2 cut(s) | 648, 1535 |
| BmiI | GGNNCC | 3 cut(s) | 649, 885, 1536 |
| BmrFI | CCNGG | 2 cut(s) | 474, 1466 |
| BmsI | GCATC | 3 cut(s) | 46, 805, 1572 |
| BpiI | GAAGAC | 2 cut(s) | 704, 915 |
| BpmI | CTGGAG | 1 cut(s) | 870 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1575 |
| BpuEI | CTTGAG | 1 cut(s) | 924 |
| BsaJI | CCNNGG | 2 cut(s) | 229, 1074 |
| BsaWI | WCCGGW | 1 cut(s) | 1630 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 365, 395, 814, 844 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 79, 740 |
| Bse1I | ACTGG | 2 cut(s) | 887, 1538 |
| Bse3DI | GCAATG | 1 cut(s) | 1066 |
| BseAI | TCCGGA | 1 cut(s) | 1630 |
| BseBI | CCWGG | 2 cut(s) | 474, 1466 |
| BseDI | CCNNGG | 2 cut(s) | 229, 1074 |
| BseGI | GGATG | 3 cut(s) | 283, 802, 1587 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 79, 740 |
| BseMI | GCAATG | 1 cut(s) | 1066 |
| BseMII | CTCAG | 2 cut(s) | 983, 1589 |
| BseNI | ACTGG | 2 cut(s) | 887, 1538 |
| BseRI | GAGGAG | 1 cut(s) | 715 |
| BseXI | GCAGC | 2 cut(s) | 46, 1225 |
| BseYI | CCCAGC | 1 cut(s) | 818 |
| BsgI | GTGCAG | 1 cut(s) | 686 |
| Bsh1236I | CGCG | 1 cut(s) | 1248 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1491 |
| BshFI | GGCC | 2 cut(s) | 17, 765 |
| BsiEI | CGRYCG | 1 cut(s) | 1491 |
| BsiHKAI | GWGCWC | 1 cut(s) | 72 |
| BsiHKCI | CYCGRG | 3 cut(s) | 63, 334, 369 |
| BsiSI | CCGG | 1 cut(s) | 1631 |
| BslFI | GGGAC | 1 cut(s) | 661 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 79, 740 |
| BsmAI | GTCTC | 5 cut(s) | 332, 337, 614, 1184, 1444 |
| BsmBI | CGTCTC | 1 cut(s) | 337 |
| BsmFI | GGGAC | 1 cut(s) | 661 |
| BsmI | GAATGC | 4 cut(s) | 556, 961, 1466, 1552 |
| BsnI | GGCC | 2 cut(s) | 17, 765 |
| BsoBI | CYCGRG | 3 cut(s) | 63, 334, 369 |
| Bsp1286I | GDGCHC | 1 cut(s) | 72 |
| Bsp13I | TCCGGA | 1 cut(s) | 1630 |
| Bsp1407I | TGTACA | 1 cut(s) | 1101 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1575 |
| BspACI | CCGC | 7 cut(s) | 189, 429, 635, 802, 983, 1246, 1579 |
| BspANI | GGCC | 2 cut(s) | 17, 765 |
| BspCNI | CTCAG | 2 cut(s) | 984, 1588 |
| BspEI | TCCGGA | 1 cut(s) | 1630 |
| BspFNI | CGCG | 1 cut(s) | 1248 |
| BspLI | GGNNCC | 3 cut(s) | 649, 885, 1536 |
| BspPI | GGATC | 9 cut(s) | 121, 150, 152, 1025, 1118, 1126, 1317, 1365, 1622 |
| BspTI | CTTAAG | 1 cut(s) | 1091 |
| BsrBI | CCGCTC | 1 cut(s) | 431 |
| BsrDI | GCAATG | 1 cut(s) | 1066 |
| BsrGI | TGTACA | 1 cut(s) | 1101 |
| BsrI | ACTGG | 2 cut(s) | 887, 1538 |
| BssECI | CCNNGG | 2 cut(s) | 229, 1074 |
| BssSI | CACGAG | 4 cut(s) | 432, 613, 1170, 1523 |
| BssT1I | CCWWGG | 1 cut(s) | 229 |
| Bst2BI | CACGAG | 4 cut(s) | 432, 613, 1170, 1523 |
| Bst2UI | CCWGG | 2 cut(s) | 474, 1466 |
| Bst4CI | ACNGT | 2 cut(s) | 1195, 1484 |
| BstAFI | CTTAAG | 1 cut(s) | 1091 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 458 |
| BstAUI | TGTACA | 1 cut(s) | 1101 |
| BstC8I | GCNNGC | 1 cut(s) | 1243 |
| BstDEI | CTNAG | 5 cut(s) | 86, 746, 992, 1575, 1732 |
| BstF5I | GGATG | 3 cut(s) | 283, 802, 1587 |
| BstFNI | CGCG | 1 cut(s) | 1248 |
| BstHHI | GCGC | 2 cut(s) | 556, 1552 |
| BstMAI | GTCTC | 5 cut(s) | 332, 337, 614, 1184, 1444 |
| BstMCI | CGRYCG | 1 cut(s) | 1491 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 44, 382, 458, 609 |
| BstNI | CCWGG | 2 cut(s) | 474, 1466 |
| BstSCI | CCNGG | 2 cut(s) | 472, 1464 |
| BstUI | CGCG | 1 cut(s) | 1248 |
| BstV1I | GCAGC | 2 cut(s) | 46, 1225 |
| BstV2I | GAAGAC | 2 cut(s) | 704, 915 |
| BstX2I | RGATCY | 5 cut(s) | 463, 1123, 1309, 1339, 1370 |
| BstYI | RGATCY | 5 cut(s) | 463, 1123, 1309, 1339, 1370 |
| BsuRI | GGCC | 2 cut(s) | 17, 765 |
| BtsCI | GGATG | 3 cut(s) | 283, 802, 1587 |
| BtsIMutI | CAGTG | 4 cut(s) | 1010, 1200, 1480, 1545 |
| Cac8I | GCNNGC | 1 cut(s) | 1243 |
| CfoI | GCGC | 2 cut(s) | 556, 1552 |
| Cfr13I | GGNCC | 2 cut(s) | 648, 1535 |
| CseI | GACGC | 1 cut(s) | 458 |
| Csp6I | GTAC | 4 cut(s) | 265, 426, 1102, 1498 |
| CviAII | CATG | 3 cut(s) | 316, 488, 848 |
| CviQI | GTAC | 4 cut(s) | 265, 426, 1102, 1498 |
| DdeI | CTNAG | 5 cut(s) | 86, 746, 992, 1575, 1732 |
| EaeI | YGGCCR | 1 cut(s) | 15 |
| EciI | GGCGGA | 1 cut(s) | 791 |
| Ecl136II | GAGCTC | 1 cut(s) | 70 |
| Eco130I | CCWWGG | 1 cut(s) | 229 |
| Eco24I | GRGCYC | 1 cut(s) | 72 |
| Eco47I | GGWCC | 2 cut(s) | 648, 1535 |
| Eco53kI | GAGCTC | 1 cut(s) | 70 |
| Eco57I | CTGAAG | 1 cut(s) | 1334 |
| Eco88I | CYCGRG | 3 cut(s) | 63, 334, 369 |
| EcoICRI | GAGCTC | 1 cut(s) | 70 |
| EcoRII | CCWGG | 2 cut(s) | 472, 1464 |
| EcoT14I | CCWWGG | 1 cut(s) | 229 |
| EcoT38I | GRGCYC | 1 cut(s) | 72 |
| ErhI | CCWWGG | 1 cut(s) | 229 |
| Esp3I | CGTCTC | 1 cut(s) | 337 |
| FaeI | CATG | 3 cut(s) | 319, 491, 851 |
| FaqI | GGGAC | 1 cut(s) | 661 |
| FatI | CATG | 3 cut(s) | 315, 487, 847 |
| FauI | CCCGC | 1 cut(s) | 182 |
| Fnu4HI | GCNGC | 4 cut(s) | 60, 984, 1239, 1246 |
| FokI | GGATG | 3 cut(s) | 270, 809, 1594 |
| FriOI | GRGCYC | 1 cut(s) | 72 |
| Fsp4HI | GCNGC | 4 cut(s) | 60, 984, 1239, 1246 |
| FspBI | CTAG | 6 cut(s) | 98, 213, 467, 608, 1166, 1376 |
| FspI | TGCGCA | 1 cut(s) | 555 |
| GlaI | GCGC | 2 cut(s) | 555, 1551 |
| GluI | GCNGC | 4 cut(s) | 60, 984, 1239, 1246 |
| GsaI | CCCAGC | 1 cut(s) | 822 |
| GsuI | CTGGAG | 1 cut(s) | 870 |
| HaeIII | GGCC | 2 cut(s) | 17, 765 |
| HapII | CCGG | 1 cut(s) | 1631 |
| HgaI | GACGC | 1 cut(s) | 458 |
| HhaI | GCGC | 2 cut(s) | 556, 1552 |
| Hin1II | CATG | 3 cut(s) | 319, 491, 851 |
| Hin6I | GCGC | 2 cut(s) | 554, 1550 |
| HinP1I | GCGC | 2 cut(s) | 554, 1550 |
| HindIII | AAGCTT | 1 cut(s) | 1729 |
| HinfI | GANTC | 7 cut(s) | 11, 572, 1291, 1319, 1469, 1652, 1682 |
| HpaII | CCGG | 1 cut(s) | 1631 |
| HphI | GGTGA | 2 cut(s) | 547, 1378 |
| Hpy166II | GTNNAC | 2 cut(s) | 221, 1163 |
| Hpy188I | TCNGA | 6 cut(s) | 10, 82, 993, 1261, 1314, 1687 |
| Hpy8I | GTNNAC | 2 cut(s) | 221, 1163 |
| Hpy99I | CGWCG | 1 cut(s) | 858 |
| HpyAV | CCTTC | 7 cut(s) | 20, 664, 755, 1013, 1309, 1610, 1706 |
| HpyCH4III | ACNGT | 2 cut(s) | 1195, 1484 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 44, 382, 458, 609 |
| HpyF3I | CTNAG | 5 cut(s) | 86, 746, 992, 1575, 1732 |
| Hsp92II | CATG | 3 cut(s) | 319, 491, 851 |
| HspAI | GCGC | 2 cut(s) | 554, 1550 |
| Kpn2I | TCCGGA | 1 cut(s) | 1630 |
| LmnI | GCTCC | 6 cut(s) | 75, 82, 373, 889, 916, 1557 |
| Lsp1109I | GCAGC | 2 cut(s) | 46, 1225 |
| LweI | GCATC | 3 cut(s) | 46, 805, 1572 |
| MaeI | CTAG | 6 cut(s) | 98, 213, 467, 608, 1166, 1376 |
| MaeIII | GTNAC | 2 cut(s) | 1271, 1622 |
| MbiI | CCGCTC | 1 cut(s) | 431 |
| MfeI | CAATTG | 2 cut(s) | 393, 1105 |
| MflI | RGATCY | 5 cut(s) | 463, 1123, 1309, 1339, 1370 |
| MhlI | GDGCHC | 1 cut(s) | 72 |
| MlyI | GAGTC | 1 cut(s) | 581 |
| MmeI | TCCRAC | 2 cut(s) | 97, 458 |
| MroI | TCCGGA | 1 cut(s) | 1630 |
| MseI | TTAA | 5 cut(s) | 195, 456, 546, 1092, 1230 |
| MslI | CAYNNNNRTG | 1 cut(s) | 706 |
| MspA1I | CMGCKG | 1 cut(s) | 1579 |
| MspCI | CTTAAG | 1 cut(s) | 1091 |
| MspI | CCGG | 1 cut(s) | 1631 |
| MspR9I | CCNGG | 2 cut(s) | 474, 1466 |
| MunI | CAATTG | 2 cut(s) | 393, 1105 |
| Mva1269I | GAATGC | 4 cut(s) | 556, 961, 1466, 1552 |
| MvaI | CCWGG | 2 cut(s) | 474, 1466 |
| MvnI | CGCG | 1 cut(s) | 1248 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 44, 382, 458, 609 |
| NlaIII | CATG | 3 cut(s) | 319, 491, 851 |
| NlaIV | GGNNCC | 3 cut(s) | 649, 885, 1536 |
| NmeAIII | GCCGAG | 1 cut(s) | 1099 |
| NmuCI | GTSAC | 1 cut(s) | 1271 |
| NsbI | TGCGCA | 1 cut(s) | 555 |
| PaeR7I | CTCGAG | 2 cut(s) | 63, 334 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 636 |
| PctI | GAATGC | 4 cut(s) | 556, 961, 1466, 1552 |
| PfeI | GAWTC | 6 cut(s) | 11, 1291, 1319, 1469, 1652, 1682 |
| PkrI | GCNGC | 4 cut(s) | 61, 985, 1240, 1247 |
| Ple19I | CGATCG | 1 cut(s) | 1491 |
| PleI | GAGTC | 1 cut(s) | 580 |
| PpsI | GAGTC | 1 cut(s) | 580 |
| PshBI | ATTAAT | 1 cut(s) | 195 |
| Psp124BI | GAGCTC | 1 cut(s) | 72 |
| Psp6I | CCWGG | 2 cut(s) | 472, 1464 |
| PspFI | CCCAGC | 1 cut(s) | 818 |
| PspGI | CCWGG | 2 cut(s) | 472, 1464 |
| PspN4I | GGNNCC | 3 cut(s) | 649, 885, 1536 |
| PspPI | GGNCC | 2 cut(s) | 648, 1535 |
| PsuI | RGATCY | 5 cut(s) | 463, 1123, 1309, 1339, 1370 |
| PvuI | CGATCG | 1 cut(s) | 1491 |
| RsaI | GTAC | 4 cut(s) | 266, 427, 1103, 1499 |
| RsaNI | GTAC | 4 cut(s) | 265, 426, 1102, 1498 |
| RseI | CAYNNNNRTG | 1 cut(s) | 706 |
| SacI | GAGCTC | 1 cut(s) | 72 |
| SaqAI | TTAA | 5 cut(s) | 195, 456, 546, 1092, 1230 |
| SatI | GCNGC | 4 cut(s) | 60, 984, 1239, 1246 |
| Sau96I | GGNCC | 2 cut(s) | 648, 1535 |
| SchI | GAGTC | 1 cut(s) | 581 |
| ScrFI | CCNGG | 2 cut(s) | 474, 1466 |
| SduI | GDGCHC | 1 cut(s) | 72 |
| SfaNI | GCATC | 3 cut(s) | 46, 805, 1572 |
| Sfr274I | CTCGAG | 2 cut(s) | 63, 334 |
| SinI | GGWCC | 2 cut(s) | 648, 1535 |
| SlaI | CTCGAG | 2 cut(s) | 63, 334 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 706 |
| SmlI | CTYRAG | 4 cut(s) | 63, 334, 939, 1091 |
| SmoI | CTYRAG | 4 cut(s) | 63, 334, 939, 1091 |
| SsiI | CCGC | 7 cut(s) | 189, 429, 635, 802, 983, 1246, 1579 |
| SspI | AATATT | 1 cut(s) | 878 |
| SspMI | CTAG | 6 cut(s) | 98, 213, 467, 608, 1166, 1376 |
| SstI | GAGCTC | 1 cut(s) | 72 |
| StyD4I | CCNGG | 2 cut(s) | 472, 1464 |
| StyI | CCWWGG | 1 cut(s) | 229 |
| TaaI | ACNGT | 2 cut(s) | 1195, 1484 |
| TaqI | TCGA | 9 cut(s) | 64, 156, 166, 335, 973, 1294, 1322, 1392, 1491 |
| TaqII | GACCGA | 1 cut(s) | 243 |
| TatI | WGTACW | 2 cut(s) | 1101, 1497 |
| TauI | GCSGC | 2 cut(s) | 986, 1248 |
| TfiI | GAWTC | 6 cut(s) | 11, 1291, 1319, 1469, 1652, 1682 |
| Tru1I | TTAA | 5 cut(s) | 195, 456, 546, 1092, 1230 |
| Tru9I | TTAA | 5 cut(s) | 195, 456, 546, 1092, 1230 |
| TscAI | CASTG | 4 cut(s) | 1017, 1200, 1487, 1545 |
| TseFI | GTSAC | 1 cut(s) | 1271 |
| TseI | GCWGC | 2 cut(s) | 59, 1238 |
| Tsp45I | GTSAC | 1 cut(s) | 1271 |
| TspDTI | ATGAA | 9 cut(s) | 410, 852, 1232, 1559, 1652, 1677, 1686, 1725, 1734 |
| TspGWI | ACGGA | 1 cut(s) | 894 |
| TspRI | CASTG | 4 cut(s) | 1017, 1200, 1487, 1545 |
| Vha464I | CTTAAG | 1 cut(s) | 1091 |
| VpaK11BI | GGWCC | 2 cut(s) | 648, 1535 |
| VspI | ATTAAT | 1 cut(s) | 195 |
| XapI | RAATTY | 4 cut(s) | 343, 768, 1507, 1559 |
| XbaI | TCTAGA | 2 cut(s) | 97, 212 |
| XhoI | CTCGAG | 2 cut(s) | 63, 334 |
| XspI | CTAG | 6 cut(s) | 98, 213, 467, 608, 1166, 1376 |