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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g00460 |
| rosa_laevigata | RLG00000010210 RLG00000010225 RLG00000010230 RLG00000010234 |
| rosa_multiflora | Rmu_sc0001259.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00333290 Rroxscaffold_5G00333440 Rroxscaffold_7G00215820 |
| rosa_rugosa | Rorug03G0300600 Rorug03G0301000 Rorug05G0508700 |
| rosa_samantha | Rh4AG005100 Rh4AG005400 Rh4BG003900 Rh4CG005500 Rh4CG005900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 2166, 2529 |
| Acc36I | ACCTGC | 1 cut(s) | 996 |
| AccB1I | GGYRCC | 1 cut(s) | 2748 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 365 |
| AccI | GTMKAC | 2 cut(s) | 2613, 3514 |
| AccIII | TCCGGA | 1 cut(s) | 972 |
| AciI | CCGC | 4 cut(s) | 785, 947, 1789, 2986 |
| AclWI | GGATC | 4 cut(s) | 121, 134, 1175, 3765 |
| AcoI | YGGCCR | 1 cut(s) | 3035 |
| AcsI | RAATTY | 9 cut(s) | 249, 476, 826, 1307, 1322, 1592, 2093, 2171, 2962 |
| AcuI | CTGAAG | 1 cut(s) | 1367 |
| AcvI | CACGTG | 1 cut(s) | 2423 |
| AcyI | GRCGYC | 1 cut(s) | 2749 |
| AfaI | GTAC | 7 cut(s) | 859, 914, 1370, 1564, 1663, 1931, 2051 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 365, 860, 979, 1136, 1831, 2514, 3875 |
| AflII | CTTAAG | 2 cut(s) | 2759, 3857 |
| AflIII | ACRYGT | 2 cut(s) | 926, 2420 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 879 |
| AhlI | ACTAGT | 1 cut(s) | 2494 |
| AjnI | CCWGG | 6 cut(s) | 114, 280, 704, 853, 1519, 2862 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 3364, 3396, 3568, 3600 |
| AleI | CACNNNNGTG | 1 cut(s) | 140 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1011, 1043 |
| Alw21I | GWGCWC | 1 cut(s) | 934 |
| Alw26I | GTCTC | 5 cut(s) | 1790, 3143, 3344, 3548, 3837 |
| AlwI | GGATC | 4 cut(s) | 121, 134, 1175, 3765 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 326, 1345 |
| Ama87I | CYCGRG | 1 cut(s) | 995 |
| Aor13HI | TCCGGA | 1 cut(s) | 972 |
| AoxI | GGCC | 3 cut(s) | 422, 740, 3035 |
| ApeKI | GCWGC | 4 cut(s) | 782, 1736, 2570, 2988 |
| ApoI | RAATTY | 9 cut(s) | 249, 476, 826, 1307, 1322, 1592, 2093, 2171, 2962 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 2939, 2971, 3080, 3112 |
| AseI | ATTAAT | 2 cut(s) | 839, 1608 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 167, 3245, 3449, 3653 |
| AspLEI | GCGC | 2 cut(s) | 2751, 3902 |
| AspS9I | GGNCC | 5 cut(s) | 275, 344, 848, 1126, 1997 |
| AsuHPI | GGTGA | 9 cut(s) | 296, 812, 1420, 2205, 2336, 3242, 3294, 3443, 3647 |
| AsuII | TTCGAA | 2 cut(s) | 3383, 3587 |
| AvaI | CYCGRG | 1 cut(s) | 995 |
| AvaII | GGWCC | 5 cut(s) | 275, 344, 848, 1126, 1997 |
| AxyI | CCTNAGG | 1 cut(s) | 1185 |
| BaeGI | GKGCMC | 1 cut(s) | 1905 |
| BamHI | GGATCC | 1 cut(s) | 126 |
| BanI | GGYRCC | 1 cut(s) | 2748 |
| BbrPI | CACGTG | 1 cut(s) | 2423 |
| BbsI | GAAGAC | 5 cut(s) | 227, 878, 973, 1492, 3090 |
| Bbv12I | GWGCWC | 1 cut(s) | 934 |
| BbvI | GCAGC | 4 cut(s) | 769, 1723, 2557, 2975 |
| BccI | CCATC | 9 cut(s) | 671, 825, 1951, 1955, 1988, 2303, 2739, 2780, 3027 |
| BceAI | ACGGC | 2 cut(s) | 630, 2976 |
| BciT130I | CCWGG | 6 cut(s) | 116, 282, 706, 855, 1521, 2864 |
| BclI | TGATCA | 3 cut(s) | 1093, 2098, 3067 |
| BcoDI | GTCTC | 5 cut(s) | 1790, 3143, 3344, 3548, 3837 |
| BcuI | ACTAGT | 1 cut(s) | 2494 |
| BfaI | CTAG | 7 cut(s) | 953, 1016, 1637, 2472, 2495, 2933, 3719 |
| BfmI | CTRYAG | 4 cut(s) | 2136, 2775, 2850, 3060 |
| BfoI | RGCGCY | 1 cut(s) | 2752 |
| BfrI | CTTAAG | 2 cut(s) | 2759, 3857 |
| BfuAI | ACCTGC | 1 cut(s) | 996 |
| BisI | GCNGC | 4 cut(s) | 783, 1737, 2571, 2989 |
| BlpI | GCTNAGC | 1 cut(s) | 1740 |
| BlsI | GCNGC | 4 cut(s) | 784, 1738, 2572, 2990 |
| Bme1390I | CCNGG | 6 cut(s) | 116, 282, 706, 855, 1521, 2864 |
| Bme18I | GGWCC | 5 cut(s) | 275, 344, 848, 1126, 1997 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 879 |
| BmeT110I | CYCGRG | 1 cut(s) | 995 |
| BmgT120I | GGNCC | 5 cut(s) | 275, 344, 848, 1126, 1997 |
| BmiI | GGNNCC | 6 cut(s) | 128, 849, 1128, 1537, 2315, 2750 |
| BmrFI | CCNGG | 6 cut(s) | 116, 282, 706, 855, 1521, 2864 |
| BmsI | GCATC | 7 cut(s) | 1676, 1926, 1948, 2494, 3338, 3542, 3746 |
| BpiI | GAAGAC | 5 cut(s) | 227, 878, 973, 1492, 3090 |
| BpmI | CTGGAG | 2 cut(s) | 476, 2846 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2556 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1740 |
| Bpu14I | TTCGAA | 2 cut(s) | 3383, 3587 |
| BpuEI | CTTGAG | 1 cut(s) | 2211 |
| BsaAI | YACGTR | 1 cut(s) | 2423 |
| BsaBI | GATNNNNATC | 2 cut(s) | 333, 3823 |
| BsaHI | GRCGYC | 1 cut(s) | 2749 |
| BsaI | GGTCTC | 2 cut(s) | 1790, 3837 |
| BsaJI | CCNNGG | 6 cut(s) | 428, 704, 705, 1830, 2317, 3895 |
| BsaWI | WCCGGW | 1 cut(s) | 972 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 365, 860, 979, 1136, 1831, 2514, 3875 |
| Bse118I | RCCGGY | 1 cut(s) | 3037 |
| Bse1I | ACTGG | 7 cut(s) | 493, 727, 865, 988, 1474, 1927, 2284 |
| Bse21I | CCTNAGG | 1 cut(s) | 1185 |
| Bse3DI | GCAATG | 4 cut(s) | 375, 3196, 3397, 3601 |
| Bse8I | GATNNNNATC | 2 cut(s) | 333, 3823 |
| BseAI | TCCGGA | 1 cut(s) | 972 |
| BseBI | CCWGG | 6 cut(s) | 116, 282, 706, 855, 1521, 2864 |
| BseDI | CCNNGG | 6 cut(s) | 428, 704, 705, 1830, 2317, 3895 |
| BseGI | GGATG | 7 cut(s) | 12, 91, 1939, 1941, 1943, 2750, 2880 |
| BseJI | GATNNNNATC | 2 cut(s) | 333, 3823 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 365, 860, 979, 1136, 1831, 2514, 3875 |
| BseMI | GCAATG | 4 cut(s) | 375, 3196, 3397, 3601 |
| BseMII | CTCAG | 7 cut(s) | 639, 1176, 1754, 2266, 2570, 2672, 3924 |
| BseNI | ACTGG | 7 cut(s) | 493, 727, 865, 988, 1474, 1927, 2284 |
| BseRI | GAGGAG | 2 cut(s) | 1268, 3089 |
| BseSI | GKGCMC | 1 cut(s) | 1905 |
| BseXI | GCAGC | 4 cut(s) | 769, 1723, 2557, 2975 |
| BsgI | GTGCAG | 1 cut(s) | 140 |
| BshFI | GGCC | 3 cut(s) | 424, 742, 3037 |
| BshNI | GGYRCC | 1 cut(s) | 2748 |
| BsiHKAI | GWGCWC | 1 cut(s) | 934 |
| BsiHKCI | CYCGRG | 1 cut(s) | 995 |
| BsiSI | CCGG | 2 cut(s) | 973, 3038 |
| BslFI | GGGAC | 2 cut(s) | 1112, 2803 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 365, 860, 979, 1136, 1831, 2514, 3875 |
| BsmAI | GTCTC | 5 cut(s) | 1790, 3143, 3344, 3548, 3837 |
| BsmFI | GGGAC | 2 cut(s) | 1112, 2803 |
| BsmI | GAATGC | 3 cut(s) | 1243, 2458, 2875 |
| BsnI | GGCC | 3 cut(s) | 424, 742, 3037 |
| Bso31I | GGTCTC | 2 cut(s) | 1790, 3837 |
| BsoBI | CYCGRG | 1 cut(s) | 995 |
| Bsp119I | TTCGAA | 2 cut(s) | 3383, 3587 |
| Bsp1286I | GDGCHC | 2 cut(s) | 934, 1905 |
| Bsp13I | TCCGGA | 1 cut(s) | 972 |
| Bsp1407I | TGTACA | 2 cut(s) | 1368, 1562 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1740 |
| Bsp19I | CCATGG | 1 cut(s) | 1830 |
| BspACI | CCGC | 4 cut(s) | 785, 947, 1789, 2986 |
| BspANI | GGCC | 3 cut(s) | 424, 742, 3037 |
| BspCNI | CTCAG | 7 cut(s) | 638, 1177, 1753, 2265, 2569, 2671, 3925 |
| BspEI | TCCGGA | 1 cut(s) | 972 |
| BspHI | TCATGA | 2 cut(s) | 1078, 3070 |
| BspLI | GGNNCC | 6 cut(s) | 128, 849, 1128, 1537, 2315, 2750 |
| BspMI | ACCTGC | 1 cut(s) | 996 |
| BspPI | GGATC | 4 cut(s) | 121, 134, 1175, 3765 |
| BspT104I | TTCGAA | 2 cut(s) | 3383, 3587 |
| BspT107I | GGYRCC | 1 cut(s) | 2748 |
| BspTI | CTTAAG | 2 cut(s) | 2759, 3857 |
| BspTNI | GGTCTC | 2 cut(s) | 1790, 3837 |
| BsrDI | GCAATG | 4 cut(s) | 375, 3196, 3397, 3601 |
| BsrFI | RCCGGY | 1 cut(s) | 3037 |
| BsrGI | TGTACA | 2 cut(s) | 1368, 1562 |
| BsrI | ACTGG | 7 cut(s) | 493, 727, 865, 988, 1474, 1927, 2284 |
| BssAI | RCCGGY | 1 cut(s) | 3037 |
| BssECI | CCNNGG | 6 cut(s) | 428, 704, 705, 1830, 2317, 3895 |
| BssNI | GRCGYC | 1 cut(s) | 2749 |
| BssT1I | CCWWGG | 4 cut(s) | 428, 1830, 2317, 3895 |
| Bst2UI | CCWGG | 6 cut(s) | 116, 282, 706, 855, 1521, 2864 |
| Bst4CI | ACNGT | 8 cut(s) | 797, 2353, 2522, 2698, 2805, 2851, 2971, 3918 |
| Bst6I | CTCTTC | 1 cut(s) | 5 |
| BstACI | GRCGYC | 1 cut(s) | 2749 |
| BstAFI | CTTAAG | 2 cut(s) | 2759, 3857 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2411 |
| BstAUI | TGTACA | 2 cut(s) | 1368, 1562 |
| BstBAI | YACGTR | 1 cut(s) | 2423 |
| BstBI | TTCGAA | 2 cut(s) | 3383, 3587 |
| BstC8I | GCNNGC | 4 cut(s) | 1648, 1890, 2158, 2718 |
| BstDEI | CTNAG | 7 cut(s) | 625, 1185, 1740, 2252, 2556, 2658, 3933 |
| BstDSI | CCRYGG | 1 cut(s) | 1830 |
| BstF5I | GGATG | 7 cut(s) | 12, 91, 1939, 1941, 1943, 2750, 2880 |
| BstH2I | RGCGCY | 1 cut(s) | 2752 |
| BstHHI | GCGC | 2 cut(s) | 2751, 3902 |
| BstMAI | GTCTC | 5 cut(s) | 1790, 3143, 3344, 3548, 3837 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 723, 1856, 1909, 2411, 2567, 3396 |
| BstNI | CCWGG | 6 cut(s) | 116, 282, 706, 855, 1521, 2864 |
| BstNSI | RCATGY | 3 cut(s) | 236, 544, 930 |
| BstSCI | CCNGG | 6 cut(s) | 114, 280, 704, 853, 1519, 2862 |
| BstSFI | CTRYAG | 4 cut(s) | 2136, 2775, 2850, 3060 |
| BstSLI | GKGCMC | 1 cut(s) | 1905 |
| BstV1I | GCAGC | 4 cut(s) | 769, 1723, 2557, 2975 |
| BstV2I | GAAGAC | 5 cut(s) | 227, 878, 973, 1492, 3090 |
| BstX2I | RGATCY | 2 cut(s) | 126, 3770 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 3033, 3346, 3550, 3754 |
| BstYI | RGATCY | 2 cut(s) | 126, 3770 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1185 |
| BsuRI | GGCC | 3 cut(s) | 424, 742, 3037 |
| BtgI | CCRYGG | 1 cut(s) | 1830 |
| BtsCI | GGATG | 7 cut(s) | 12, 91, 1939, 1941, 1943, 2750, 2880 |
| BtsI | GCAGTG | 1 cut(s) | 3798 |
| BtsIMutI | CAGTG | 8 cut(s) | 720, 2299, 2694, 2976, 3339, 3543, 3747, 3798 |
| BveI | ACCTGC | 1 cut(s) | 996 |
| Cac8I | GCNNGC | 4 cut(s) | 1648, 1890, 2158, 2718 |
| CaiI | CAGNNNCTG | 2 cut(s) | 326, 1345 |
| CciI | TCATGA | 2 cut(s) | 1078, 3070 |
| CfoI | GCGC | 2 cut(s) | 2751, 3902 |
| Cfr10I | RCCGGY | 1 cut(s) | 3037 |
| Cfr13I | GGNCC | 5 cut(s) | 275, 344, 848, 1126, 1997 |
| CseI | GACGC | 2 cut(s) | 2445, 2930 |
| CsiI | ACCWGGT | 1 cut(s) | 114 |
| Csp6I | GTAC | 7 cut(s) | 858, 913, 1369, 1563, 1662, 1930, 2050 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 925, 960 |
| CviQI | GTAC | 7 cut(s) | 858, 913, 1369, 1563, 1662, 1930, 2050 |
| DdeI | CTNAG | 7 cut(s) | 625, 1185, 1740, 2252, 2556, 2658, 3933 |
| DinI | GGCGCC | 1 cut(s) | 2750 |
| DriI | GACNNNNNGTC | 1 cut(s) | 879 |
| EaeI | YGGCCR | 1 cut(s) | 3035 |
| Eam1104I | CTCTTC | 1 cut(s) | 5 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 879 |
| EarI | CTCTTC | 1 cut(s) | 5 |
| EciI | GGCGGA | 1 cut(s) | 1778 |
| Eco130I | CCWWGG | 4 cut(s) | 428, 1830, 2317, 3895 |
| Eco147I | AGGCCT | 1 cut(s) | 424 |
| Eco31I | GGTCTC | 2 cut(s) | 1790, 3837 |
| Eco32I | GATATC | 1 cut(s) | 373 |
| Eco47I | GGWCC | 5 cut(s) | 275, 344, 848, 1126, 1997 |
| Eco57I | CTGAAG | 1 cut(s) | 1367 |
| Eco72I | CACGTG | 1 cut(s) | 2423 |
| Eco81I | CCTNAGG | 1 cut(s) | 1185 |
| Eco88I | CYCGRG | 1 cut(s) | 995 |
| EcoO109I | RGGNCCY | 1 cut(s) | 848 |
| EcoRI | GAATTC | 3 cut(s) | 826, 1592, 2171 |
| EcoRII | CCWGG | 6 cut(s) | 114, 280, 704, 853, 1519, 2862 |
| EcoRV | GATATC | 1 cut(s) | 373 |
| EcoT14I | CCWWGG | 4 cut(s) | 428, 1830, 2317, 3895 |
| EcoT22I | ATGCAT | 3 cut(s) | 546, 1941, 3005 |
| EgeI | GGCGCC | 1 cut(s) | 2750 |
| EheI | GGCGCC | 1 cut(s) | 2750 |
| ErhI | CCWWGG | 4 cut(s) | 428, 1830, 2317, 3895 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2636, 2668 |
| FaqI | GGGAC | 2 cut(s) | 1112, 2803 |
| FauNDI | CATATG | 2 cut(s) | 1300, 3142 |
| FbaI | TGATCA | 3 cut(s) | 1093, 2098, 3067 |
| FblI | GTMKAC | 2 cut(s) | 2613, 3514 |
| Fnu4HI | GCNGC | 4 cut(s) | 783, 1737, 2571, 2989 |
| FokI | GGATG | 7 cut(s) | 19, 98, 1926, 1930, 1948, 2757, 2867 |
| Fsp4HI | GCNGC | 4 cut(s) | 783, 1737, 2571, 2989 |
| FspBI | CTAG | 7 cut(s) | 953, 1016, 1637, 2472, 2495, 2933, 3719 |
| GlaI | GCGC | 2 cut(s) | 2750, 3901 |
| GluI | GCNGC | 4 cut(s) | 783, 1737, 2571, 2989 |
| GsuI | CTGGAG | 2 cut(s) | 476, 2846 |
| HaeII | RGCGCY | 1 cut(s) | 2752 |
| HaeIII | GGCC | 3 cut(s) | 424, 742, 3037 |
| HapII | CCGG | 2 cut(s) | 973, 3038 |
| HgaI | GACGC | 2 cut(s) | 2445, 2930 |
| HhaI | GCGC | 2 cut(s) | 2751, 3902 |
| Hin1I | GRCGYC | 1 cut(s) | 2749 |
| Hin6I | GCGC | 2 cut(s) | 2749, 3900 |
| HinP1I | GCGC | 2 cut(s) | 2749, 3900 |
| HincII | GTYRAC | 3 cut(s) | 985, 2460, 2614 |
| HindII | GTYRAC | 3 cut(s) | 985, 2460, 2614 |
| HindIII | AAGCTT | 2 cut(s) | 2732, 3784 |
| HpaI | GTTAAC | 1 cut(s) | 985 |
| HpaII | CCGG | 2 cut(s) | 973, 3038 |
| HphI | GGTGA | 9 cut(s) | 296, 812, 1420, 2205, 2336, 3242, 3294, 3443, 3647 |
| Hpy166II | GTNNAC | 9 cut(s) | 985, 1315, 1371, 1563, 2460, 2614, 2974, 3515, 3921 |
| Hpy8I | GTNNAC | 9 cut(s) | 985, 1315, 1371, 1563, 2460, 2614, 2974, 3515, 3921 |
| HpyCH4III | ACNGT | 8 cut(s) | 797, 2353, 2522, 2698, 2805, 2851, 2971, 3918 |
| HpyCH4IV | ACGT | 2 cut(s) | 305, 2422 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 723, 1856, 1909, 2411, 2567, 3396 |
| HpyF3I | CTNAG | 7 cut(s) | 625, 1185, 1740, 2252, 2556, 2658, 3933 |
| HpySE526I | ACGT | 2 cut(s) | 305, 2422 |
| Hsp92I | GRCGYC | 1 cut(s) | 2749 |
| HspAI | GCGC | 2 cut(s) | 2749, 3900 |
| KasI | GGCGCC | 1 cut(s) | 2748 |
| Kpn2I | TCCGGA | 1 cut(s) | 972 |
| Ksp22I | TGATCA | 3 cut(s) | 1093, 2098, 3067 |
| KspAI | GTTAAC | 1 cut(s) | 985 |
| LmnI | GCTCC | 4 cut(s) | 937, 1342, 2581, 3481 |
| Lsp1109I | GCAGC | 4 cut(s) | 769, 1723, 2557, 2975 |
| LweI | GCATC | 7 cut(s) | 1676, 1926, 1948, 2494, 3338, 3542, 3746 |
| MabI | ACCWGGT | 1 cut(s) | 114 |
| MaeI | CTAG | 7 cut(s) | 953, 1016, 1637, 2472, 2495, 2933, 3719 |
| MaeII | ACGT | 2 cut(s) | 305, 2422 |
| MaeIII | GTNAC | 9 cut(s) | 142, 155, 228, 284, 990, 1037, 1578, 2474, 2993 |
| MfeI | CAATTG | 1 cut(s) | 3372 |
| MflI | RGATCY | 2 cut(s) | 126, 3770 |
| MhlI | GDGCHC | 2 cut(s) | 934, 1905 |
| Mly113I | GGCGCC | 1 cut(s) | 2749 |
| MlyI | GAGTC | 7 cut(s) | 217, 889, 963, 1502, 2471, 2609, 3814 |
| MmeI | TCCRAC | 4 cut(s) | 346, 1470, 2093, 3820 |
| Mph1103I | ATGCAT | 3 cut(s) | 546, 1941, 3005 |
| MroI | TCCGGA | 1 cut(s) | 972 |
| MroXI | GAANNNNTTC | 4 cut(s) | 167, 3245, 3449, 3653 |
| MslI | CAYNNNNRTG | 6 cut(s) | 140, 3344, 3508, 3548, 3712, 3752 |
| MspA1I | CMGCKG | 3 cut(s) | 272, 2570, 2988 |
| MspCI | CTTAAG | 2 cut(s) | 2759, 3857 |
| MspI | CCGG | 2 cut(s) | 973, 3038 |
| MspR9I | CCNGG | 6 cut(s) | 116, 282, 706, 855, 1521, 2864 |
| MunI | CAATTG | 1 cut(s) | 3372 |
| Mva1269I | GAATGC | 3 cut(s) | 1243, 2458, 2875 |
| MvaI | CCWGG | 6 cut(s) | 116, 282, 706, 855, 1521, 2864 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 723, 1856, 1909, 2411, 2567, 3396 |
| NarI | GGCGCC | 1 cut(s) | 2749 |
| NcoI | CCATGG | 1 cut(s) | 1830 |
| NdeI | CATATG | 2 cut(s) | 1300, 3142 |
| NlaIV | GGNNCC | 6 cut(s) | 128, 849, 1128, 1537, 2315, 2750 |
| NmuCI | GTSAC | 7 cut(s) | 142, 228, 284, 990, 1578, 2474, 2993 |
| NsiI | ATGCAT | 3 cut(s) | 546, 1941, 3005 |
| NspI | RCATGY | 3 cut(s) | 236, 544, 930 |
| NspV | TTCGAA | 2 cut(s) | 3383, 3587 |
| OliI | CACNNNNGTG | 1 cut(s) | 140 |
| PaeR7I | CTCGAG | 1 cut(s) | 995 |
| PagI | TCATGA | 2 cut(s) | 1078, 3070 |
| PasI | CCCWGGG | 1 cut(s) | 705 |
| PceI | AGGCCT | 1 cut(s) | 424 |
| PciI | ACATGT | 1 cut(s) | 926 |
| PctI | GAATGC | 3 cut(s) | 1243, 2458, 2875 |
| PdmI | GAANNNNTTC | 4 cut(s) | 167, 3245, 3449, 3653 |
| PflFI | GACNNNGTC | 1 cut(s) | 226 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 365 |
| PfoI | TCCNGGA | 2 cut(s) | 1519, 2862 |
| PkrI | GCNGC | 4 cut(s) | 784, 1738, 2572, 2990 |
| PleI | GAGTC | 7 cut(s) | 217, 888, 963, 1501, 2471, 2609, 3813 |
| PluTI | GGCGCC | 1 cut(s) | 2752 |
| PmaCI | CACGTG | 1 cut(s) | 2423 |
| PmlI | CACGTG | 1 cut(s) | 2423 |
| PpsI | GAGTC | 7 cut(s) | 217, 888, 963, 1501, 2471, 2609, 3813 |
| Ppu21I | YACGTR | 1 cut(s) | 2423 |
| PpuMI | RGGWCCY | 1 cut(s) | 848 |
| PscI | ACATGT | 1 cut(s) | 926 |
| PshBI | ATTAAT | 2 cut(s) | 839, 1608 |
| PsiI | TTATAA | 2 cut(s) | 2166, 2529 |
| Psp5II | RGGWCCY | 1 cut(s) | 848 |
| Psp6I | CCWGG | 6 cut(s) | 114, 280, 704, 853, 1519, 2862 |
| PspCI | CACGTG | 1 cut(s) | 2423 |
| PspGI | CCWGG | 6 cut(s) | 114, 280, 704, 853, 1519, 2862 |
| PspN4I | GGNNCC | 6 cut(s) | 128, 849, 1128, 1537, 2315, 2750 |
| PspPI | GGNCC | 5 cut(s) | 275, 344, 848, 1126, 1997 |
| PspPPI | RGGWCCY | 1 cut(s) | 848 |
| PspXI | VCTCGAGB | 1 cut(s) | 995 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1546, 1578 |
| PstNI | CAGNNNCTG | 2 cut(s) | 326, 1345 |
| PsuI | RGATCY | 2 cut(s) | 126, 3770 |
| PsyI | GACNNNGTC | 1 cut(s) | 226 |
| PvuII | CAGCTG | 2 cut(s) | 272, 2570 |
| RsaI | GTAC | 7 cut(s) | 859, 914, 1370, 1564, 1663, 1931, 2051 |
| RsaNI | GTAC | 7 cut(s) | 858, 913, 1369, 1563, 1662, 1930, 2050 |
| RseI | CAYNNNNRTG | 6 cut(s) | 140, 3344, 3508, 3548, 3712, 3752 |
| SalI | GTCGAC | 1 cut(s) | 2612 |
| SatI | GCNGC | 4 cut(s) | 783, 1737, 2571, 2989 |
| Sau96I | GGNCC | 5 cut(s) | 275, 344, 848, 1126, 1997 |
| SchI | GAGTC | 7 cut(s) | 217, 889, 963, 1502, 2471, 2609, 3814 |
| ScrFI | CCNGG | 6 cut(s) | 116, 282, 706, 855, 1521, 2864 |
| SduI | GDGCHC | 2 cut(s) | 934, 1905 |
| SexAI | ACCWGGT | 1 cut(s) | 114 |
| SfaNI | GCATC | 7 cut(s) | 1676, 1926, 1948, 2494, 3338, 3542, 3746 |
| SfcI | CTRYAG | 4 cut(s) | 2136, 2775, 2850, 3060 |
| SfoI | GGCGCC | 1 cut(s) | 2750 |
| Sfr274I | CTCGAG | 1 cut(s) | 995 |
| SfuI | TTCGAA | 2 cut(s) | 3383, 3587 |
| SinI | GGWCC | 5 cut(s) | 275, 344, 848, 1126, 1997 |
| SlaI | CTCGAG | 1 cut(s) | 995 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 140, 3344, 3508, 3548, 3712, 3752 |
| SmlI | CTYRAG | 4 cut(s) | 995, 2226, 2759, 3857 |
| SmoI | CTYRAG | 4 cut(s) | 995, 2226, 2759, 3857 |
| SpeI | ACTAGT | 1 cut(s) | 2494 |
| SseBI | AGGCCT | 1 cut(s) | 424 |
| SsiI | CCGC | 4 cut(s) | 785, 947, 1789, 2986 |
| SspDI | GGCGCC | 1 cut(s) | 2748 |
| SspI | AATATT | 4 cut(s) | 943, 1196, 1616, 1656 |
| SspMI | CTAG | 7 cut(s) | 953, 1016, 1637, 2472, 2495, 2933, 3719 |
| StuI | AGGCCT | 1 cut(s) | 424 |
| StyD4I | CCNGG | 6 cut(s) | 114, 280, 704, 853, 1519, 2862 |
| StyI | CCWWGG | 4 cut(s) | 428, 1830, 2317, 3895 |
| TaaI | ACNGT | 8 cut(s) | 797, 2353, 2522, 2698, 2805, 2851, 2971, 3918 |
| TaiI | ACGT | 2 cut(s) | 308, 2425 |
| TaqII | GACCGA | 1 cut(s) | 361 |
| TatI | WGTACW | 5 cut(s) | 912, 1368, 1562, 1661, 1929 |
| TscAI | CASTG | 8 cut(s) | 727, 2299, 2701, 2976, 3346, 3550, 3754, 3805 |
| TseFI | GTSAC | 7 cut(s) | 142, 228, 284, 990, 1578, 2474, 2993 |
| TseI | GCWGC | 4 cut(s) | 782, 1736, 2570, 2988 |
| Tsp45I | GTSAC | 7 cut(s) | 142, 228, 284, 990, 1578, 2474, 2993 |
| TspGWI | ACGGA | 3 cut(s) | 593, 2278, 2530 |
| TspRI | CASTG | 8 cut(s) | 727, 2299, 2701, 2976, 3346, 3550, 3754, 3805 |
| Tth111I | GACNNNGTC | 1 cut(s) | 226 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 365 |
| Vha464I | CTTAAG | 2 cut(s) | 2759, 3857 |
| VpaK11BI | GGWCC | 5 cut(s) | 275, 344, 848, 1126, 1997 |
| VspI | ATTAAT | 2 cut(s) | 839, 1608 |
| XapI | RAATTY | 9 cut(s) | 249, 476, 826, 1307, 1322, 1592, 2093, 2171, 2962 |
| XceI | RCATGY | 3 cut(s) | 236, 544, 930 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1991 |
| XhoI | CTCGAG | 1 cut(s) | 995 |
| XmiI | GTMKAC | 2 cut(s) | 2613, 3514 |
| XmnI | GAANNNNTTC | 4 cut(s) | 167, 3245, 3449, 3653 |
| XspI | CTAG | 7 cut(s) | 953, 1016, 1637, 2472, 2495, 2933, 3719 |
| Zsp2I | ATGCAT | 3 cut(s) | 546, 1941, 3005 |