Tetratricopeptide repeat
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G04770 |
| fragaria_vesca | FvH4_4g05910 FvH4_4g05910 |
| malus_domestica | MD13G1231400.v1.1 |
| prunus_persica | Prupe.1G061500_v2.0.a1 |
| pyrus_communis | pycom13g20430 |
| rosa_chinensis | RchiOBHm_Chr4g0397051 |
| rosa_laevigata | RLG00000009453 |
| rosa_multiflora | Rmu_sc0007785.1_g000009 |
| rosa_roxburghii | Rroxscaffold_5G00342050 |
| rosa_rugosa | Rorug03G0345200 Rorug03G0345300 Rorug03G0345400 |
| rosa_samantha | Rh4AG076800 Rh4BG072700 Rh4CG081700 Rh4DG070200 |
| rosa_wichuraiana | Rw0G020190 Rw4G006180 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 11 |
| AcuI | CTGAAG | 1 cut(s) | 65 |
| AoxI | GGCC | 1 cut(s) | 237 |
| ApeKI | GCWGC | 2 cut(s) | 86, 89 |
| AsuHPI | GGTGA | 1 cut(s) | 150 |
| BbvI | GCAGC | 2 cut(s) | 98, 101 |
| BisI | GCNGC | 2 cut(s) | 87, 90 |
| BlsI | GCNGC | 2 cut(s) | 88, 91 |
| BmsI | GCATC | 2 cut(s) | 83, 163 |
| BseGI | GGATG | 2 cut(s) | 74, 178 |
| BseMII | CTCAG | 2 cut(s) | 36, 244 |
| BseXI | GCAGC | 2 cut(s) | 98, 101 |
| BseYI | CCCAGC | 1 cut(s) | 38 |
| BshFI | GGCC | 1 cut(s) | 239 |
| BslFI | GGGAC | 1 cut(s) | 34 |
| BsmFI | GGGAC | 1 cut(s) | 34 |
| BsnI | GGCC | 1 cut(s) | 239 |
| BspANI | GGCC | 1 cut(s) | 239 |
| BspCNI | CTCAG | 2 cut(s) | 35, 243 |
| Bst4CI | ACNGT | 1 cut(s) | 185 |
| BstDEI | CTNAG | 2 cut(s) | 22, 230 |
| BstF5I | GGATG | 2 cut(s) | 74, 178 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 39, 95 |
| BstV1I | GCAGC | 2 cut(s) | 98, 101 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 130 |
| BsuRI | GGCC | 1 cut(s) | 239 |
| BtgZI | GCGATG | 1 cut(s) | 87 |
| BtsCI | GGATG | 2 cut(s) | 74, 178 |
| CviAII | CATG | 1 cut(s) | 70 |
| CviJI | RGCY | 4 cut(s) | 42, 98, 112, 239 |
| CviKI_1 | RGCY | 4 cut(s) | 42, 98, 112, 239 |
| DdeI | CTNAG | 2 cut(s) | 22, 230 |
| Eco147I | AGGCCT | 1 cut(s) | 239 |
| Eco57I | CTGAAG | 1 cut(s) | 65 |
| FaeI | CATG | 1 cut(s) | 73 |
| FaiI | YATR | 4 cut(s) | 31, 71, 203, 246 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 38, 70 |
| FaqI | GGGAC | 1 cut(s) | 34 |
| FatI | CATG | 1 cut(s) | 69 |
| FblI | GTMKAC | 1 cut(s) | 11 |
| Fnu4HI | GCNGC | 2 cut(s) | 87, 90 |
| FokI | GGATG | 2 cut(s) | 61, 185 |
| Fsp4HI | GCNGC | 2 cut(s) | 87, 90 |
| GluI | GCNGC | 2 cut(s) | 87, 90 |
| GsaI | CCCAGC | 1 cut(s) | 42 |
| HaeIII | GGCC | 1 cut(s) | 239 |
| Hin1II | CATG | 1 cut(s) | 73 |
| HinfI | GANTC | 1 cut(s) | 8 |
| HphI | GGTGA | 1 cut(s) | 150 |
| Hpy166II | GTNNAC | 2 cut(s) | 12, 191 |
| Hpy188III | TCNNGA | 1 cut(s) | 24 |
| Hpy8I | GTNNAC | 2 cut(s) | 12, 191 |
| HpyAV | CCTTC | 1 cut(s) | 165 |
| HpyCH4III | ACNGT | 1 cut(s) | 185 |
| HpyCH4V | TGCA | 2 cut(s) | 33, 176 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 39, 95 |
| HpyF3I | CTNAG | 2 cut(s) | 22, 230 |
| Hsp92II | CATG | 1 cut(s) | 73 |
| LpnPI | CCDG | 5 cut(s) | 9, 50, 52, 56, 221 |
| Lsp1109I | GCAGC | 2 cut(s) | 98, 101 |
| LweI | GCATC | 2 cut(s) | 83, 163 |
| MlyI | GAGTC | 1 cut(s) | 17 |
| MmeI | TCCRAC | 1 cut(s) | 150 |
| MnlI | CCTC | 1 cut(s) | 109 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 39, 95 |
| NlaIII | CATG | 1 cut(s) | 73 |
| PceI | AGGCCT | 1 cut(s) | 239 |
| PkrI | GCNGC | 2 cut(s) | 88, 91 |
| PleI | GAGTC | 1 cut(s) | 16 |
| PpsI | GAGTC | 1 cut(s) | 16 |
| PspFI | CCCAGC | 1 cut(s) | 38 |
| SatI | GCNGC | 2 cut(s) | 87, 90 |
| SchI | GAGTC | 1 cut(s) | 17 |
| SetI | ASST | 1 cut(s) | 69 |
| SfaNI | GCATC | 2 cut(s) | 83, 163 |
| SseBI | AGGCCT | 1 cut(s) | 239 |
| StuI | AGGCCT | 1 cut(s) | 239 |
| TaaI | ACNGT | 1 cut(s) | 185 |
| TseI | GCWGC | 2 cut(s) | 86, 89 |
| TspDTI | ATGAA | 2 cut(s) | 153, 190 |
| XmiI | GTMKAC | 1 cut(s) | 11 |