ribosome biogenesis GTPase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G67440 AT1G67440 AT1G67460 AT1G67460 |
| fragaria_vesca | FvH4_4g23940 FvH4_4g23940 |
| malus_domestica | MD13G1117100.v1.1 |
| prunus_persica | Prupe.1G228400_v2.0.a1 |
| pyrus_communis | pycom16g10080 |
| rosa_chinensis | RchiOBHm_Chr4g0430601 |
| rosa_laevigata | RLG00000006967 |
| rosa_multiflora | Rmu_co8493293.1_g000001 Rmu_sc0000131.1_g000020 Rmu_sc0011782.1_g000003 |
| rosa_roxburghii | Rroxscaffold_5G00372340 |
| rosa_rugosa | Rorug04G0244700 |
| rosa_samantha | Rh4AG300500 Rh4BG307500 Rh4CG324500 Rh4DG304900 |
| rosa_wichuraiana | Rw4G026080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 321 |
| Acc36I | ACCTGC | 1 cut(s) | 321 |
| Acc65I | GGTACC | 1 cut(s) | 1489 |
| AccB1I | GGYRCC | 1 cut(s) | 1489 |
| AciI | CCGC | 4 cut(s) | 71, 465, 528, 1121 |
| AclWI | GGATC | 1 cut(s) | 493 |
| AcoI | YGGCCR | 1 cut(s) | 694 |
| AcsI | RAATTY | 8 cut(s) | 305, 327, 364, 810, 1061, 1125, 1446, 1785 |
| AcuI | CTGAAG | 1 cut(s) | 1322 |
| AfaI | GTAC | 2 cut(s) | 1263, 1491 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 166, 703, 1000, 1741 |
| AjnI | CCWGG | 2 cut(s) | 177, 950 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 1377, 1409, 1670, 1702 |
| AluBI | AGCT | 6 cut(s) | 770, 898, 1295, 1325, 1415, 1614 |
| AluI | AGCT | 6 cut(s) | 770, 898, 1295, 1325, 1415, 1614 |
| Alw26I | GTCTC | 3 cut(s) | 193, 605, 1754 |
| AlwI | GGATC | 1 cut(s) | 493 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1415 |
| AoxI | GGCC | 2 cut(s) | 694, 1555 |
| ApeKI | GCWGC | 3 cut(s) | 415, 1292, 1412 |
| ApoI | RAATTY | 8 cut(s) | 305, 327, 364, 810, 1061, 1125, 1446, 1785 |
| AseI | ATTAAT | 4 cut(s) | 393, 1226, 1254, 1590 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 306, 1785 |
| Asp718I | GGTACC | 1 cut(s) | 1489 |
| AspLEI | GCGC | 2 cut(s) | 859, 1643 |
| AspS9I | GGNCC | 3 cut(s) | 832, 1342, 1556 |
| AsuHPI | GGTGA | 5 cut(s) | 92, 302, 1017, 1124, 1576 |
| AsuNHI | GCTAGC | 1 cut(s) | 745 |
| AvaII | GGWCC | 2 cut(s) | 832, 1342 |
| AxyI | CCTNAGG | 1 cut(s) | 1690 |
| BanI | GGYRCC | 1 cut(s) | 1489 |
| BanII | GRGCYC | 1 cut(s) | 250 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1059, 1091 |
| BbsI | GAAGAC | 3 cut(s) | 711, 1148, 1328 |
| BbvI | GCAGC | 3 cut(s) | 427, 1304, 1424 |
| BccI | CCATC | 5 cut(s) | 490, 735, 758, 1026, 1463 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1518, 1552 |
| BciT130I | CCWGG | 2 cut(s) | 179, 952 |
| BcoDI | GTCTC | 3 cut(s) | 193, 605, 1754 |
| BfaI | CTAG | 4 cut(s) | 243, 746, 1029, 1778 |
| BfmI | CTRYAG | 2 cut(s) | 735, 1076 |
| BfoI | RGCGCY | 2 cut(s) | 860, 1644 |
| BfuAI | ACCTGC | 1 cut(s) | 321 |
| BglII | AGATCT | 1 cut(s) | 592 |
| BisI | GCNGC | 4 cut(s) | 416, 529, 1293, 1413 |
| BlpI | GCTNAGC | 1 cut(s) | 506 |
| BlsI | GCNGC | 4 cut(s) | 417, 530, 1294, 1414 |
| Bme1390I | CCNGG | 2 cut(s) | 179, 952 |
| Bme18I | GGWCC | 2 cut(s) | 832, 1342 |
| BmgT120I | GGNCC | 3 cut(s) | 832, 1342, 1556 |
| BmiI | GGNNCC | 5 cut(s) | 834, 1085, 1318, 1344, 1491 |
| BmrFI | CCNGG | 2 cut(s) | 179, 952 |
| BmrI | ACTGGG | 2 cut(s) | 564, 830 |
| BmsI | GCATC | 2 cut(s) | 926, 1087 |
| BmtI | GCTAGC | 1 cut(s) | 749 |
| BmuI | ACTGGG | 2 cut(s) | 564, 830 |
| BpiI | GAAGAC | 3 cut(s) | 711, 1148, 1328 |
| BpmI | CTGGAG | 3 cut(s) | 134, 973, 1702 |
| Bpu10I | CCTNAGC | 2 cut(s) | 762, 1746 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 506 |
| BsaI | GGTCTC | 1 cut(s) | 1754 |
| BsaJI | CCNNGG | 5 cut(s) | 177, 871, 910, 1087, 1559 |
| BsaWI | WCCGGW | 1 cut(s) | 1508 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1068, 1098 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 166, 703, 1000, 1741 |
| Bse1I | ACTGG | 6 cut(s) | 570, 805, 836, 1485, 1637, 1685 |
| Bse21I | CCTNAGG | 1 cut(s) | 1690 |
| Bse3DI | GCAATG | 1 cut(s) | 714 |
| BseBI | CCWGG | 2 cut(s) | 179, 952 |
| BseDI | CCNNGG | 5 cut(s) | 177, 871, 910, 1087, 1559 |
| BseGI | GGATG | 2 cut(s) | 501, 746 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 166, 703, 1000, 1741 |
| BseMI | GCAATG | 1 cut(s) | 714 |
| BseMII | CTCAG | 3 cut(s) | 603, 776, 1704 |
| BseNI | ACTGG | 6 cut(s) | 570, 805, 836, 1485, 1637, 1685 |
| BseRI | GAGGAG | 1 cut(s) | 419 |
| BseX3I | CGGCCG | 1 cut(s) | 694 |
| BseXI | GCAGC | 3 cut(s) | 427, 1304, 1424 |
| BsgI | GTGCAG | 2 cut(s) | 669, 1734 |
| Bsh1285I | CGRYCG | 2 cut(s) | 697, 1051 |
| BshFI | GGCC | 2 cut(s) | 696, 1557 |
| BshNI | GGYRCC | 1 cut(s) | 1489 |
| BsiEI | CGRYCG | 2 cut(s) | 697, 1051 |
| BsiSI | CCGG | 1 cut(s) | 1509 |
| BslFI | GGGAC | 3 cut(s) | 818, 1328, 1739 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 166, 703, 1000, 1741 |
| BsmAI | GTCTC | 3 cut(s) | 193, 605, 1754 |
| BsmBI | CGTCTC | 1 cut(s) | 605 |
| BsmFI | GGGAC | 3 cut(s) | 818, 1328, 1739 |
| BsnI | GGCC | 2 cut(s) | 696, 1557 |
| Bso31I | GGTCTC | 1 cut(s) | 1754 |
| Bsp1286I | GDGCHC | 1 cut(s) | 250 |
| Bsp143I | GATC | 4 cut(s) | 219, 485, 592, 1202 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 506 |
| Bsp19I | CCATGG | 1 cut(s) | 1087 |
| BspACI | CCGC | 4 cut(s) | 71, 465, 528, 1121 |
| BspANI | GGCC | 2 cut(s) | 696, 1557 |
| BspCNI | CTCAG | 3 cut(s) | 604, 775, 1703 |
| BspHI | TCATGA | 1 cut(s) | 448 |
| BspLI | GGNNCC | 5 cut(s) | 834, 1085, 1318, 1344, 1491 |
| BspMAI | CTGCAG | 1 cut(s) | 739 |
| BspMI | ACCTGC | 1 cut(s) | 321 |
| BspOI | GCTAGC | 1 cut(s) | 749 |
| BspPI | GGATC | 1 cut(s) | 493 |
| BspQI | GCTCTTC | 1 cut(s) | 905 |
| BspT107I | GGYRCC | 1 cut(s) | 1489 |
| BspTNI | GGTCTC | 1 cut(s) | 1754 |
| BsrDI | GCAATG | 1 cut(s) | 714 |
| BsrI | ACTGG | 6 cut(s) | 570, 805, 836, 1485, 1637, 1685 |
| BssECI | CCNNGG | 5 cut(s) | 177, 871, 910, 1087, 1559 |
| BssMI | GATC | 4 cut(s) | 219, 485, 592, 1202 |
| BssT1I | CCWWGG | 3 cut(s) | 910, 1087, 1559 |
| Bst2UI | CCWGG | 2 cut(s) | 179, 952 |
| Bst4CI | ACNGT | 1 cut(s) | 270 |
| Bst6I | CTCTTC | 3 cut(s) | 31, 102, 905 |
| BstC8I | GCNNGC | 5 cut(s) | 747, 882, 1038, 1276, 1555 |
| BstDEI | CTNAG | 5 cut(s) | 506, 612, 762, 1690, 1746 |
| BstDSI | CCRYGG | 2 cut(s) | 871, 1087 |
| BstF5I | GGATG | 2 cut(s) | 501, 746 |
| BstH2I | RGCGCY | 2 cut(s) | 860, 1644 |
| BstHHI | GCGC | 2 cut(s) | 859, 1643 |
| BstKTI | GATC | 4 cut(s) | 222, 488, 595, 1205 |
| BstMAI | GTCTC | 3 cut(s) | 193, 605, 1754 |
| BstMBI | GATC | 4 cut(s) | 219, 485, 592, 1202 |
| BstMCI | CGRYCG | 2 cut(s) | 697, 1051 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 767, 854 |
| BstNI | CCWGG | 2 cut(s) | 179, 952 |
| BstNSI | RCATGY | 1 cut(s) | 1335 |
| BstSCI | CCNGG | 2 cut(s) | 177, 950 |
| BstSFI | CTRYAG | 2 cut(s) | 735, 1076 |
| BstV1I | GCAGC | 3 cut(s) | 427, 1304, 1424 |
| BstV2I | GAAGAC | 3 cut(s) | 711, 1148, 1328 |
| BstX2I | RGATCY | 1 cut(s) | 592 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1174 |
| BstYI | RGATCY | 1 cut(s) | 592 |
| BstZI | CGGCCG | 1 cut(s) | 694 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1690 |
| BsuRI | GGCC | 2 cut(s) | 696, 1557 |
| BtgI | CCRYGG | 2 cut(s) | 871, 1087 |
| BtsCI | GGATG | 2 cut(s) | 501, 746 |
| BtsI | GCAGTG | 2 cut(s) | 657, 732 |
| BtsIMutI | CAGTG | 3 cut(s) | 266, 657, 732 |
| BveI | ACCTGC | 1 cut(s) | 321 |
| Cac8I | GCNNGC | 5 cut(s) | 747, 882, 1038, 1276, 1555 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1415 |
| CciI | TCATGA | 1 cut(s) | 448 |
| CfoI | GCGC | 2 cut(s) | 859, 1643 |
| Cfr13I | GGNCC | 3 cut(s) | 832, 1342, 1556 |
| Csp6I | GTAC | 2 cut(s) | 1262, 1490 |
| CviAII | CATG | 7 cut(s) | 317, 401, 449, 622, 1088, 1332, 1806 |
| CviQI | GTAC | 2 cut(s) | 1262, 1490 |
| DdeI | CTNAG | 5 cut(s) | 506, 612, 762, 1690, 1746 |
| DpnI | GATC | 4 cut(s) | 221, 487, 594, 1204 |
| DpnII | GATC | 4 cut(s) | 219, 485, 592, 1202 |
| EaeI | YGGCCR | 1 cut(s) | 694 |
| EagI | CGGCCG | 1 cut(s) | 694 |
| Eam1104I | CTCTTC | 3 cut(s) | 31, 102, 905 |
| EarI | CTCTTC | 3 cut(s) | 31, 102, 905 |
| EciI | GGCGGA | 2 cut(s) | 60, 1136 |
| EclXI | CGGCCG | 1 cut(s) | 694 |
| Eco130I | CCWWGG | 3 cut(s) | 910, 1087, 1559 |
| Eco24I | GRGCYC | 1 cut(s) | 250 |
| Eco31I | GGTCTC | 1 cut(s) | 1754 |
| Eco47I | GGWCC | 2 cut(s) | 832, 1342 |
| Eco52I | CGGCCG | 1 cut(s) | 694 |
| Eco57I | CTGAAG | 1 cut(s) | 1322 |
| Eco81I | CCTNAGG | 1 cut(s) | 1690 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1342, 1556 |
| EcoRI | GAATTC | 1 cut(s) | 364 |
| EcoRII | CCWGG | 2 cut(s) | 177, 950 |
| EcoT14I | CCWWGG | 3 cut(s) | 910, 1087, 1559 |
| EcoT22I | ATGCAT | 1 cut(s) | 1333 |
| EcoT38I | GRGCYC | 1 cut(s) | 250 |
| ErhI | CCWWGG | 3 cut(s) | 910, 1087, 1559 |
| Esp3I | CGTCTC | 1 cut(s) | 605 |
| FaeI | CATG | 7 cut(s) | 320, 404, 452, 625, 1091, 1335, 1809 |
| FaqI | GGGAC | 3 cut(s) | 818, 1328, 1739 |
| FatI | CATG | 7 cut(s) | 316, 400, 448, 621, 1087, 1331, 1805 |
| FauI | CCCGC | 1 cut(s) | 458 |
| Fnu4HI | GCNGC | 4 cut(s) | 416, 529, 1293, 1413 |
| FokI | GGATG | 2 cut(s) | 508, 753 |
| FriOI | GRGCYC | 1 cut(s) | 250 |
| Fsp4HI | GCNGC | 4 cut(s) | 416, 529, 1293, 1413 |
| FspBI | CTAG | 4 cut(s) | 243, 746, 1029, 1778 |
| GlaI | GCGC | 2 cut(s) | 858, 1642 |
| GluI | GCNGC | 4 cut(s) | 416, 529, 1293, 1413 |
| GsuI | CTGGAG | 3 cut(s) | 134, 973, 1702 |
| HaeII | RGCGCY | 2 cut(s) | 860, 1644 |
| HaeIII | GGCC | 2 cut(s) | 696, 1557 |
| HapII | CCGG | 1 cut(s) | 1509 |
| HhaI | GCGC | 2 cut(s) | 859, 1643 |
| Hin1II | CATG | 7 cut(s) | 320, 404, 452, 625, 1091, 1335, 1809 |
| Hin6I | GCGC | 2 cut(s) | 857, 1641 |
| HinP1I | GCGC | 2 cut(s) | 857, 1641 |
| HindIII | AAGCTT | 1 cut(s) | 1612 |
| HinfI | GANTC | 7 cut(s) | 263, 346, 356, 686, 892, 1022, 1793 |
| HpaII | CCGG | 1 cut(s) | 1509 |
| HphI | GGTGA | 5 cut(s) | 92, 302, 1017, 1124, 1576 |
| Hpy166II | GTNNAC | 3 cut(s) | 924, 1522, 1630 |
| Hpy188I | TCNGA | 6 cut(s) | 36, 291, 345, 355, 1161, 1576 |
| Hpy8I | GTNNAC | 3 cut(s) | 924, 1522, 1630 |
| Hpy99I | CGWCG | 3 cut(s) | 19, 22, 286 |
| HpyAV | CCTTC | 6 cut(s) | 94, 114, 783, 1380, 1456, 1591 |
| HpyCH4III | ACNGT | 1 cut(s) | 270 |
| HpyCH4IV | ACGT | 2 cut(s) | 926, 1524 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 767, 854 |
| HpyF3I | CTNAG | 5 cut(s) | 506, 612, 762, 1690, 1746 |
| HpySE526I | ACGT | 2 cut(s) | 926, 1524 |
| Hsp92II | CATG | 7 cut(s) | 320, 404, 452, 625, 1091, 1335, 1809 |
| HspAI | GCGC | 2 cut(s) | 857, 1641 |
| KpnI | GGTACC | 1 cut(s) | 1493 |
| Kzo9I | GATC | 4 cut(s) | 219, 485, 592, 1202 |
| LguI | GCTCTTC | 1 cut(s) | 905 |
| LmnI | GCTCC | 6 cut(s) | 412, 767, 914, 1089, 1361, 1550 |
| Lsp1109I | GCAGC | 3 cut(s) | 427, 1304, 1424 |
| LweI | GCATC | 2 cut(s) | 926, 1087 |
| MaeI | CTAG | 4 cut(s) | 243, 746, 1029, 1778 |
| MaeII | ACGT | 2 cut(s) | 926, 1524 |
| MaeIII | GTNAC | 2 cut(s) | 1023, 1141 |
| MalI | GATC | 4 cut(s) | 221, 487, 594, 1204 |
| MboI | GATC | 4 cut(s) | 219, 485, 592, 1202 |
| MfeI | CAATTG | 2 cut(s) | 489, 642 |
| MflI | RGATCY | 1 cut(s) | 592 |
| MhlI | GDGCHC | 1 cut(s) | 250 |
| MlyI | GAGTC | 2 cut(s) | 257, 1031 |
| MmeI | TCCRAC | 4 cut(s) | 59, 390, 1201, 1423 |
| Mph1103I | ATGCAT | 1 cut(s) | 1333 |
| MroXI | GAANNNNTTC | 2 cut(s) | 306, 1785 |
| MseI | TTAA | 5 cut(s) | 113, 393, 1226, 1254, 1590 |
| MslI | CAYNNNNRTG | 3 cut(s) | 315, 453, 1030 |
| MspA1I | CMGCKG | 3 cut(s) | 465, 1295, 1415 |
| MspI | CCGG | 1 cut(s) | 1509 |
| MspR9I | CCNGG | 2 cut(s) | 179, 952 |
| MunI | CAATTG | 2 cut(s) | 489, 642 |
| MvaI | CCWGG | 2 cut(s) | 179, 952 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 767, 854 |
| NcoI | CCATGG | 1 cut(s) | 1087 |
| NdeII | GATC | 4 cut(s) | 219, 485, 592, 1202 |
| NheI | GCTAGC | 1 cut(s) | 745 |
| NlaIII | CATG | 7 cut(s) | 320, 404, 452, 625, 1091, 1335, 1809 |
| NlaIV | GGNNCC | 5 cut(s) | 834, 1085, 1318, 1344, 1491 |
| NmeAIII | GCCGAG | 1 cut(s) | 672 |
| NmuCI | GTSAC | 1 cut(s) | 1023 |
| NsiI | ATGCAT | 1 cut(s) | 1333 |
| NspI | RCATGY | 1 cut(s) | 1335 |
| PagI | TCATGA | 1 cut(s) | 448 |
| PaqCI | CACCTGC | 1 cut(s) | 321 |
| PciSI | GCTCTTC | 1 cut(s) | 905 |
| PdmI | GAANNNNTTC | 2 cut(s) | 306, 1785 |
| PfeI | GAWTC | 5 cut(s) | 346, 356, 686, 892, 1793 |
| PfoI | TCCNGGA | 1 cut(s) | 950 |
| PkrI | GCNGC | 4 cut(s) | 417, 530, 1294, 1414 |
| PleI | GAGTC | 2 cut(s) | 257, 1030 |
| PpsI | GAGTC | 2 cut(s) | 257, 1030 |
| PpuMI | RGGWCCY | 1 cut(s) | 1342 |
| PshBI | ATTAAT | 4 cut(s) | 393, 1226, 1254, 1590 |
| Psp5II | RGGWCCY | 1 cut(s) | 1342 |
| Psp6I | CCWGG | 2 cut(s) | 177, 950 |
| PspGI | CCWGG | 2 cut(s) | 177, 950 |
| PspN4I | GGNNCC | 5 cut(s) | 834, 1085, 1318, 1344, 1491 |
| PspPI | GGNCC | 3 cut(s) | 832, 1342, 1556 |
| PspPPI | RGGWCCY | 1 cut(s) | 1342 |
| PstI | CTGCAG | 1 cut(s) | 739 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1415 |
| PsuI | RGATCY | 1 cut(s) | 592 |
| PvuII | CAGCTG | 2 cut(s) | 1295, 1415 |
| RsaI | GTAC | 2 cut(s) | 1263, 1491 |
| RsaNI | GTAC | 2 cut(s) | 1262, 1490 |
| RseI | CAYNNNNRTG | 3 cut(s) | 315, 453, 1030 |
| SapI | GCTCTTC | 1 cut(s) | 905 |
| SaqAI | TTAA | 5 cut(s) | 113, 393, 1226, 1254, 1590 |
| SatI | GCNGC | 4 cut(s) | 416, 529, 1293, 1413 |
| Sau3AI | GATC | 4 cut(s) | 219, 485, 592, 1202 |
| Sau96I | GGNCC | 3 cut(s) | 832, 1342, 1556 |
| SchI | GAGTC | 2 cut(s) | 257, 1031 |
| ScrFI | CCNGG | 2 cut(s) | 179, 952 |
| SduI | GDGCHC | 1 cut(s) | 250 |
| SfaNI | GCATC | 2 cut(s) | 926, 1087 |
| SfcI | CTRYAG | 2 cut(s) | 735, 1076 |
| SinI | GGWCC | 2 cut(s) | 832, 1342 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 315, 453, 1030 |
| SsiI | CCGC | 4 cut(s) | 71, 465, 528, 1121 |
| SspMI | CTAG | 4 cut(s) | 243, 746, 1029, 1778 |
| StyD4I | CCNGG | 2 cut(s) | 177, 950 |
| StyI | CCWWGG | 3 cut(s) | 910, 1087, 1559 |
| TaaI | ACNGT | 1 cut(s) | 270 |
| TaiI | ACGT | 2 cut(s) | 929, 1527 |
| TaqI | TCGA | 4 cut(s) | 368, 1051, 1201, 1538 |
| TaqII | GACCGA | 1 cut(s) | 1037 |
| TatI | WGTACW | 1 cut(s) | 1261 |
| TauI | GCSGC | 1 cut(s) | 531 |
| TfiI | GAWTC | 5 cut(s) | 346, 356, 686, 892, 1793 |
| Tru1I | TTAA | 5 cut(s) | 113, 393, 1226, 1254, 1590 |
| Tru9I | TTAA | 5 cut(s) | 113, 393, 1226, 1254, 1590 |
| TscAI | CASTG | 3 cut(s) | 273, 657, 739 |
| TseFI | GTSAC | 1 cut(s) | 1023 |
| TseI | GCWGC | 3 cut(s) | 415, 1292, 1412 |
| Tsp45I | GTSAC | 1 cut(s) | 1023 |
| TspDTI | ATGAA | 9 cut(s) | 333, 377, 412, 465, 804, 892, 919, 1414, 1691 |
| TspGWI | ACGGA | 2 cut(s) | 270, 860 |
| TspRI | CASTG | 3 cut(s) | 273, 657, 739 |
| VpaK11BI | GGWCC | 2 cut(s) | 832, 1342 |
| VspI | ATTAAT | 4 cut(s) | 393, 1226, 1254, 1590 |
| XapI | RAATTY | 8 cut(s) | 305, 327, 364, 810, 1061, 1125, 1446, 1785 |
| XbaI | TCTAGA | 1 cut(s) | 1777 |
| XceI | RCATGY | 1 cut(s) | 1335 |
| XmnI | GAANNNNTTC | 2 cut(s) | 306, 1785 |
| XspI | CTAG | 4 cut(s) | 243, 746, 1029, 1778 |
| Zsp2I | ATGCAT | 1 cut(s) | 1333 |