Rorug04G0309300

UPF0420 protein C16orf58 homolog

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Forward (+)
48474796 .. 48476763
1968 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0309300.1

Sequence Viewer

Length: 1968 bp
ATGGAAGCCCTCCCATCAATACAAACCCAGCGTCTTCTCATCAAGGACAACCCACTCAACGCTTCCCAGCAGAGACATGCCCAAAATGTTCAGACCCCAACGAAGGTCGCTGTGGCACACCAAGTGTTCGACGGAATGCCCCAGTCAGACACCTACGCTTGGAATAAGCTTATCCAAACCCATATCGCCAACAATGACTTCCACCACGCCGTCTCTACTTACCACCAAATGCTCCACCGCGGTGTTCGCCCAGATAGGCACACTCTGCCTCGTGCATTATCCGCTTCCCGCCTCTCGGCTGATCTATCTCTCGGCAAACAACTCCATTGCCATGCTTTGAAATTCGGTTGCTCCAATGACAGGTATGTAATTGCTGCTCTCATTGAGCTTTATGGGCGTCTTCAGAGCGTTGACACGGCGAAATGGGTGTATGAGAAGTCCAATGTGAGGGATTTGGTGTCATGGACTATGATTGCTAGGTTGTACATTGCGGAAGGTAAGCCAAGAATGGCGCTTGATATGTTCGATGGAATGGTTGAGTCTGGAGCTGAGATAGATGCCGTGGCACTGGCGACGGCTGCTGGAGCTTGTGGCTTGTTGAAATCGATGACGGATGGAATGAAAGTCCACCGGGTTGCAAAAGAGCGGGGGTTGGAGTTTGATGTGTTGGTGAGCAATAGCCTCTCGAAAATGTACATTGATTGTGGCTGTGTAGAGGATGCTCGGGCGATTTTCGATCAGAGGCCTGCAAAAGATGTCATTTCGTGGACAGAGATGATTCGTGTCTTTGTGAAGAAGGGAGGTTTCAATGAGGGTCTTAAATTGTTTCGGCAGATGATTGCAGATGGACTGAAACCGGATCAACTCTCGGTATCTACCGTCCTCCCAGCCTGTGCAAGAGTGTCCGCCAATAAACAAGGTAAAGAAATTCATGGATACTTGCTTCGAAATGGAATCCATATGAATCTCACTGTCCAGAATGCTTTTATGGACATGTATATCAAATCAGGATTTATTGAATGTGCTTCGAAATTTTTTGCCGGGTTGAAGCACAAAGATGTTATTTCATGTACTGTGATGATATTAGGGTACAGCTTACATGGACAAGGACACCTTGGAGTTGATTTGTTCCGCCAAATAGAGAAAGACTCGAGCATAAAGATTGATGAATTAACATATGCTGCTGTACTTCATGCTTGTGTTGCTGCACGAATGGTTGAGGAAGGGAAGTTTTACTTCAACTGTATAAAGACACCTACAGTTGCACACTGTGCTTTGTTAGTAGCTCTTTTATCTCATTCTGGACTCTTTGATGAGGCAAGGAACTTCATATCAGAGAAAAGAATCGAAGGACATGCTGAGGTACTGAGAGCACTGCTAGATGGCTGTAGGATTCATAAGCAATTGATATTAGGTAAGCGGCTCGCTGAGCAGCTCTGTGATTTGGAACCTCTTAATCCCGATAATTATGTGTTACTCTCCAATCTGTATGCTGACAATGCAAAATGGGACATGGTCTTTGCACTCAGAGGAATGATTACTGACATGGGTCTGAAACCGAGGGAAGCTTGTTCTTGGATAGAATTCAGAAACAAAATTCATGTGTTTGGGACGAGAGATGCAGCTCACCCAAGATCAGAGAGACTATACTGGGAGCTGCAGTGTCTGACAAAGAAAATGGAAGATGAAGATATCAGACTTGATTTGGATTATAGTCTCCATGATGTATATGAAGAACGGGAGTGCATTCAAATTGGACACAGTGAGATGTTGGCAATTTCTTTTGGTCTCATCAGTACACTAGCTGGAACAACAATACGTGTAACTAAGAACCTCCGGGTGTGCCGCAATTGCCATGCTTCTGCAAAAGCTATATCCAAGATGGTAGGACGAGAAATCATACTCAAGGACCCAAATTGTTTCCACCATTTTAAGGATGGATATTGTTCATGTGGTGATTTTTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

655

Amino Acids

73.71

Weight (kDa)

8.13

Isoelectric Point (pI)

36.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 50 - 88 2.1e-07 PPR repeat family
PPR_2 PF13041 251 - 300 3.3e-08 PPR repeat family
E_motif PF20431 468 - 528 8.8e-10 E motif
DYW_deaminase PF14432 568 - 655 7.6e-33 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 646
AccII CGCG 1 cut(s) 240
AclWI GGATC 1 cut(s) 867
AcsI RAATTY 5 cut(s) 341, 927, 1031, 1583, 1596
AcuI CTGAAG 1 cut(s) 386
AcyI GRCGYC 1 cut(s) 397
AdeI CACNNNGTG 2 cut(s) 124, 1271
AfaI GTAC 7 cut(s) 485, 695, 1072, 1091, 1188, 1365, 1798
AfiI CCNNNNNNNGG 6 cut(s) 103, 159, 295, 360, 447, 1933
AflIII ACRYGT 2 cut(s) 993, 1819
AgsI TTSAA 7 cut(s) 340, 601, 808, 1019, 1048, 1240, 1751
AjuI GAANNNNNNNTTGG 2 cut(s) 182, 214
AleI CACNNNNGTG 1 cut(s) 240
Alw21I GWGCWC 1 cut(s) 1375
Alw26I GTCTC 5 cut(s) 67, 217, 1636, 1721, 1793
AlwI GGATC 1 cut(s) 867
AlwNI CAGNNNCTG 1 cut(s) 1666
Ama87I CYCGRG 2 cut(s) 723, 1150
AoxI GGCC 1 cut(s) 743
ApeKI GCWGC 7 cut(s) 374, 578, 1181, 1205, 1432, 1622, 1657
ApoI RAATTY 5 cut(s) 341, 927, 1031, 1583, 1596
ArsI GACNNNNNNTTYG 4 cut(s) 16, 48, 1502, 1534
AspLEI GCGC 1 cut(s) 514
AspS9I GGNCC 1 cut(s) 1909
AsuC2I CCSGG 3 cut(s) 632, 1042, 1838
AsuHPI GGTGA 3 cut(s) 682, 1619, 1967
AsuII TTCGAA 2 cut(s) 946, 1028
AvaI CYCGRG 2 cut(s) 723, 1150
AvaII GGWCC 1 cut(s) 1909
BauI CACGAG 1 cut(s) 270
BbsI GAAGAC 2 cut(s) 26, 392
Bbv12I GWGCWC 1 cut(s) 1375
BbvCI CCTCAGC 1 cut(s) 1359
BbvI GCAGC 7 cut(s) 361, 565, 1168, 1192, 1444, 1634, 1644
BccI CCATC 7 cut(s) 22, 521, 608, 839, 1376, 1876, 1931
BceAI ACGGC 4 cut(s) 194, 432, 545, 591
BcgI CGANNNNNNTGC 2 cut(s) 1337, 1371
BciVI GTATCC 1 cut(s) 929
BcnI CCSGG 3 cut(s) 632, 1042, 1838
BcoDI GTCTC 5 cut(s) 67, 217, 1636, 1721, 1793
BfaI CTAG 3 cut(s) 477, 1379, 1802
BfmI CTRYAG 3 cut(s) 1257, 1387, 1658
BfoI RGCGCY 1 cut(s) 515
BfuI GTATCC 1 cut(s) 929
BisI GCNGC 9 cut(s) 375, 579, 1182, 1206, 1421, 1433, 1623, 1658, 1846
BlpI GCTNAGC 1 cut(s) 1428
BlsI GCNGC 9 cut(s) 376, 580, 1183, 1207, 1422, 1434, 1624, 1659, 1847
Bme1390I CCNGG 3 cut(s) 632, 1042, 1838
Bme18I GGWCC 1 cut(s) 1909
BmeT110I CYCGRG 2 cut(s) 723, 1150
BmgT120I GGNCC 1 cut(s) 1909
BmiI GGNNCC 2 cut(s) 1449, 1911
BmrFI CCNGG 3 cut(s) 632, 1042, 1838
BmrI ACTGGG 2 cut(s) 136, 1660
BmsI GCATC 3 cut(s) 547, 709, 1609
BmuI ACTGGG 2 cut(s) 136, 1660
BoxI GACNNNNGTC 1 cut(s) 1548
BpiI GAAGAC 2 cut(s) 26, 392
BplI GAGNNNNNCTC 2 cut(s) 1133, 1165
BpmI CTGGAG 2 cut(s) 564, 603
Bpu10I CCTNAGC 1 cut(s) 1359
Bpu1102I GCTNAGC 1 cut(s) 1428
Bpu14I TTCGAA 2 cut(s) 946, 1028
BpuEI CTTGAG 1 cut(s) 1889
BpuMI CCSGG 3 cut(s) 632, 1042, 1838
Bsa29I ATCGAT 1 cut(s) 605
BsaAI YACGTR 1 cut(s) 1820
BsaHI GRCGYC 1 cut(s) 397
BsaI GGTCTC 1 cut(s) 1793
BsaJI CCNNGG 4 cut(s) 238, 561, 1114, 1559
BsaWI WCCGGW 1 cut(s) 856
BsaXI ACNNNNNCTCC 2 cut(s) 1646, 1676
Bsc4I CCNNNNNNNGG 6 cut(s) 103, 159, 295, 360, 447, 1933
Bse1I ACTGG 3 cut(s) 142, 573, 1655
Bse3DI GCAATG 2 cut(s) 325, 486
BseCI ATCGAT 1 cut(s) 605
BseDI CCNNGG 4 cut(s) 238, 561, 1114, 1559
BseGI GGATG 3 cut(s) 619, 724, 1942
BseLI CCNNNNNNNGG 6 cut(s) 103, 159, 295, 360, 447, 1933
BseMI GCAATG 2 cut(s) 325, 486
BseMII CTCAG 5 cut(s) 540, 1350, 1358, 1419, 1540
BseNI ACTGG 3 cut(s) 142, 573, 1655
BseXI GCAGC 7 cut(s) 361, 565, 1168, 1192, 1444, 1634, 1644
BseYI CCCAGC 3 cut(s) 27, 66, 886
BsgI GTGCAG 1 cut(s) 1191
Bsh1236I CGCG 1 cut(s) 240
BshFI GGCC 1 cut(s) 745
BshVI ATCGAT 1 cut(s) 605
BsiHKAI GWGCWC 1 cut(s) 1375
BsiHKCI CYCGRG 2 cut(s) 723, 1150
BsiSI CCGG 4 cut(s) 631, 857, 1041, 1837
BslFI GGGAC 2 cut(s) 1523, 1624
BslI CCNNNNNNNGG 6 cut(s) 103, 159, 295, 360, 447, 1933
BsmAI GTCTC 5 cut(s) 67, 217, 1636, 1721, 1793
BsmBI CGTCTC 1 cut(s) 217
BsmFI GGGAC 2 cut(s) 1523, 1624
BsmI GAATGC 3 cut(s) 141, 985, 1746
BsnI GGCC 1 cut(s) 745
Bso31I GGTCTC 1 cut(s) 1793
BsoBI CYCGRG 2 cut(s) 723, 1150
Bsp119I TTCGAA 2 cut(s) 946, 1028
Bsp1286I GDGCHC 1 cut(s) 1375
Bsp1407I TGTACA 2 cut(s) 483, 693
Bsp143I GATC 4 cut(s) 301, 736, 859, 1634
Bsp1720I GCTNAGC 1 cut(s) 1428
BspANI GGCC 1 cut(s) 745
BspCNI CTCAG 5 cut(s) 541, 1351, 1359, 1420, 1539
BspDI ATCGAT 1 cut(s) 605
BspFNI CGCG 1 cut(s) 240
BspLI GGNNCC 2 cut(s) 1449, 1911
BspMAI CTGCAG 1 cut(s) 1662
BspPI GGATC 1 cut(s) 867
BspT104I TTCGAA 2 cut(s) 946, 1028
BspTNI GGTCTC 1 cut(s) 1793
BsrBI CCGCTC 1 cut(s) 646
BsrDI GCAATG 2 cut(s) 325, 486
BsrGI TGTACA 2 cut(s) 483, 693
BsrI ACTGG 3 cut(s) 142, 573, 1655
BssECI CCNNGG 4 cut(s) 238, 561, 1114, 1559
BssMI GATC 4 cut(s) 301, 736, 859, 1634
BssNI GRCGYC 1 cut(s) 397
BssSI CACGAG 1 cut(s) 270
BssT1I CCWWGG 1 cut(s) 1114
Bst2BI CACGAG 1 cut(s) 270
Bst4CI ACNGT 7 cut(s) 880, 973, 1075, 1244, 1261, 1271, 1763
BstACI GRCGYC 1 cut(s) 397
BstAPI GCANNNNNTGC 2 cut(s) 265, 1271
BstAUI TGTACA 2 cut(s) 483, 693
BstBAI YACGTR 1 cut(s) 1820
BstBI TTCGAA 2 cut(s) 946, 1028
BstC8I GCNNGC 2 cut(s) 747, 1425
BstDEI CTNAG 6 cut(s) 549, 1359, 1367, 1428, 1526, 1827
BstDSI CCRYGG 2 cut(s) 238, 561
BstF5I GGATG 3 cut(s) 619, 724, 1942
BstFNI CGCG 1 cut(s) 240
BstH2I RGCGCY 1 cut(s) 515
BstHHI GCGC 1 cut(s) 514
BstKTI GATC 4 cut(s) 304, 739, 862, 1637
BstMAI GTCTC 5 cut(s) 67, 217, 1636, 1721, 1793
BstMBI GATC 4 cut(s) 301, 736, 859, 1634
BstNSI RCATGY 3 cut(s) 80, 997, 1358
BstPAI GACNNNNGTC 1 cut(s) 1548
BstSCI CCNGG 3 cut(s) 630, 1040, 1836
BstSFI CTRYAG 3 cut(s) 1257, 1387, 1658
BstUI CGCG 1 cut(s) 240
BstV1I GCAGC 7 cut(s) 361, 565, 1168, 1192, 1444, 1634, 1644
BstV2I GAAGAC 2 cut(s) 26, 392
Bsu15I ATCGAT 1 cut(s) 605
BsuI GTATCC 1 cut(s) 929
BsuRI GGCC 1 cut(s) 745
BsuTUI ATCGAT 1 cut(s) 605
BtgI CCRYGG 2 cut(s) 238, 561
BtsCI GGATG 3 cut(s) 619, 724, 1942
BtsI GCAGTG 2 cut(s) 1373, 1667
BtsIMutI CAGTG 6 cut(s) 566, 969, 1267, 1373, 1667, 1768
Cac8I GCNNGC 2 cut(s) 747, 1425
CaiI CAGNNNCTG 1 cut(s) 1666
CfoI GCGC 1 cut(s) 514
Cfr13I GGNCC 1 cut(s) 1909
Cfr42I CCGCGG 1 cut(s) 241
ClaI ATCGAT 1 cut(s) 605
CseI GACGC 2 cut(s) 20, 386
Csp6I GTAC 7 cut(s) 484, 694, 1071, 1090, 1187, 1364, 1797
CviQI GTAC 7 cut(s) 484, 694, 1071, 1090, 1187, 1364, 1797
DdeI CTNAG 6 cut(s) 549, 1359, 1367, 1428, 1526, 1827
DpnI GATC 4 cut(s) 303, 738, 861, 1636
DpnII GATC 4 cut(s) 301, 736, 859, 1634
DraIII CACNNNGTG 2 cut(s) 124, 1271
EciI GGCGGA 2 cut(s) 895, 1121
Eco130I CCWWGG 1 cut(s) 1114
Eco147I AGGCCT 1 cut(s) 745
Eco31I GGTCTC 1 cut(s) 1793
Eco32I GATATC 1 cut(s) 1693
Eco47I GGWCC 1 cut(s) 1909
Eco57I CTGAAG 1 cut(s) 386
Eco88I CYCGRG 2 cut(s) 723, 1150
EcoO109I RGGNCCY 1 cut(s) 1909
EcoRI GAATTC 1 cut(s) 1583
EcoRV GATATC 1 cut(s) 1693
EcoT14I CCWWGG 1 cut(s) 1114
ErhI CCWWGG 1 cut(s) 1114
Esp3I CGTCTC 1 cut(s) 217
FalI AAGNNNNNCTT 4 cut(s) 1098, 1130, 1220, 1252
FaqI GGGAC 2 cut(s) 1523, 1624
FauI CCCGC 2 cut(s) 296, 639
FauNDI CATATG 2 cut(s) 960, 1177
Fnu4HI GCNGC 9 cut(s) 375, 579, 1182, 1206, 1421, 1433, 1623, 1658, 1846
FokI GGATG 3 cut(s) 626, 731, 1949
Fsp4HI GCNGC 9 cut(s) 375, 579, 1182, 1206, 1421, 1433, 1623, 1658, 1846
FspBI CTAG 3 cut(s) 477, 1379, 1802
GlaI GCGC 1 cut(s) 513
GluI GCNGC 9 cut(s) 375, 579, 1182, 1206, 1421, 1433, 1623, 1658, 1846
GsaI CCCAGC 3 cut(s) 31, 70, 890
GsuI CTGGAG 2 cut(s) 564, 603
HaeII RGCGCY 1 cut(s) 515
HaeIII GGCC 1 cut(s) 745
HapII CCGG 4 cut(s) 631, 857, 1041, 1837
HgaI GACGC 2 cut(s) 20, 386
HhaI GCGC 1 cut(s) 514
Hin1I GRCGYC 1 cut(s) 397
Hin6I GCGC 1 cut(s) 512
HinP1I GCGC 1 cut(s) 512
HincII GTYRAC 1 cut(s) 412
HindII GTYRAC 1 cut(s) 412
HindIII AAGCTT 2 cut(s) 167, 1566
HinfI GANTC 8 cut(s) 539, 778, 954, 964, 1148, 1305, 1344, 1393
HpaII CCGG 4 cut(s) 631, 857, 1041, 1837
HphI GGTGA 3 cut(s) 682, 1619, 1967
Hpy166II GTNNAC 4 cut(s) 412, 628, 768, 1799
Hpy188III TCNNGA 6 cut(s) 543, 685, 976, 1008, 1302, 1460
Hpy8I GTNNAC 4 cut(s) 412, 628, 768, 1799
Hpy99I CGWCG 2 cut(s) 134, 577
HpyAV CCTTC 5 cut(s) 97, 488, 790, 1217, 1343
HpyCH4III ACNGT 7 cut(s) 880, 973, 1075, 1244, 1261, 1271, 1763
HpyCH4IV ACGT 1 cut(s) 1819
HpyF3I CTNAG 6 cut(s) 549, 1359, 1367, 1428, 1526, 1827
HpySE526I ACGT 1 cut(s) 1819
Hsp92I GRCGYC 1 cut(s) 397
HspAI GCGC 1 cut(s) 512
KspI CCGCGG 1 cut(s) 241
Kzo9I GATC 4 cut(s) 301, 736, 859, 1634
LmnI GCTCC 5 cut(s) 237, 356, 545, 584, 1654
Lsp1109I GCAGC 7 cut(s) 361, 565, 1168, 1192, 1444, 1634, 1644
LweI GCATC 3 cut(s) 547, 709, 1609
MaeI CTAG 3 cut(s) 477, 1379, 1802
MaeII ACGT 1 cut(s) 1819
MaeIII GTNAC 2 cut(s) 1473, 1822
MalI GATC 4 cut(s) 303, 738, 861, 1636
MbiI CCGCTC 1 cut(s) 646
MboI GATC 4 cut(s) 301, 736, 859, 1634
MboII GAAGA 6 cut(s) 26, 392, 805, 1694, 1700, 1745
MfeI CAATTG 2 cut(s) 1403, 1849
MhlI GDGCHC 1 cut(s) 1375
MlyI GAGTC 3 cut(s) 548, 1142, 1299
MmeI TCCRAC 1 cut(s) 633
MseI TTAA 4 cut(s) 819, 1172, 1455, 1932
MslI CAYNNNNRTG 4 cut(s) 240, 330, 1056, 1197
MspA1I CMGCKG 1 cut(s) 240
MspI CCGG 4 cut(s) 631, 857, 1041, 1837
MspR9I CCNGG 3 cut(s) 632, 1042, 1838
MunI CAATTG 2 cut(s) 1403, 1849
Mva1269I GAATGC 3 cut(s) 141, 985, 1746
MvnI CGCG 1 cut(s) 240
NciI CCSGG 3 cut(s) 632, 1042, 1838
NdeI CATATG 2 cut(s) 960, 1177
NdeII GATC 4 cut(s) 301, 736, 859, 1634
NlaIV GGNNCC 2 cut(s) 1449, 1911
NmeAIII GCCGAG 2 cut(s) 275, 291
NspI RCATGY 3 cut(s) 80, 997, 1358
NspV TTCGAA 2 cut(s) 946, 1028
OliI CACNNNNGTG 1 cut(s) 240
PaeR7I CTCGAG 1 cut(s) 1150
PceI AGGCCT 1 cut(s) 745
PciI ACATGT 1 cut(s) 993
PctI GAATGC 3 cut(s) 141, 985, 1746
PfeI GAWTC 5 cut(s) 778, 954, 964, 1344, 1393
PflFI GACNNNGTC 1 cut(s) 1514
PkrI GCNGC 9 cut(s) 376, 580, 1183, 1207, 1422, 1434, 1624, 1659, 1847
PleI GAGTC 3 cut(s) 547, 1142, 1299
PpsI GAGTC 3 cut(s) 547, 1142, 1299
Ppu21I YACGTR 1 cut(s) 1820
PpuMI RGGWCCY 1 cut(s) 1909
PscI ACATGT 1 cut(s) 993
PshAI GACNNNNGTC 1 cut(s) 1548
Psp5II RGGWCCY 1 cut(s) 1909
PspFI CCCAGC 3 cut(s) 27, 66, 886
PspN4I GGNNCC 2 cut(s) 1449, 1911
PspPI GGNCC 1 cut(s) 1909
PspPPI RGGWCCY 1 cut(s) 1909
PspXI VCTCGAGB 1 cut(s) 1150
PstI CTGCAG 1 cut(s) 1662
PstNI CAGNNNCTG 1 cut(s) 1666
PsyI GACNNNGTC 1 cut(s) 1514
RsaI GTAC 7 cut(s) 485, 695, 1072, 1091, 1188, 1365, 1798
RsaNI GTAC 7 cut(s) 484, 694, 1071, 1090, 1187, 1364, 1797
RseI CAYNNNNRTG 4 cut(s) 240, 330, 1056, 1197
SacII CCGCGG 1 cut(s) 241
SaqAI TTAA 4 cut(s) 819, 1172, 1455, 1932
SatI GCNGC 9 cut(s) 375, 579, 1182, 1206, 1421, 1433, 1623, 1658, 1846
Sau3AI GATC 4 cut(s) 301, 736, 859, 1634
Sau96I GGNCC 1 cut(s) 1909
SchI GAGTC 3 cut(s) 548, 1142, 1299
ScrFI CCNGG 3 cut(s) 632, 1042, 1838
SduI GDGCHC 1 cut(s) 1375
SfaNI GCATC 3 cut(s) 547, 709, 1609
SfcI CTRYAG 3 cut(s) 1257, 1387, 1658
Sfr274I CTCGAG 1 cut(s) 1150
Sfr303I CCGCGG 1 cut(s) 241
SfuI TTCGAA 2 cut(s) 946, 1028
SgrBI CCGCGG 1 cut(s) 241
SinI GGWCC 1 cut(s) 1909
SlaI CTCGAG 1 cut(s) 1150
SmiMI CAYNNNNRTG 4 cut(s) 240, 330, 1056, 1197
SmlI CTYRAG 2 cut(s) 1150, 1904
SmoI CTYRAG 2 cut(s) 1150, 1904
SseBI AGGCCT 1 cut(s) 745
SspMI CTAG 3 cut(s) 477, 1379, 1802
StuI AGGCCT 1 cut(s) 745
StyD4I CCNGG 3 cut(s) 630, 1040, 1836
StyI CCWWGG 1 cut(s) 1114
TaaI ACNGT 7 cut(s) 880, 973, 1075, 1244, 1261, 1271, 1763
TaiI ACGT 1 cut(s) 1822
TaqI TCGA 9 cut(s) 129, 525, 605, 686, 735, 946, 1028, 1151, 1347
TatI WGTACW 5 cut(s) 483, 693, 1070, 1186, 1796
TauI GCSGC 2 cut(s) 1423, 1848
TfiI GAWTC 5 cut(s) 778, 954, 964, 1344, 1393
Tru1I TTAA 4 cut(s) 819, 1172, 1455, 1932
Tru9I TTAA 4 cut(s) 819, 1172, 1455, 1932
TscAI CASTG 6 cut(s) 573, 976, 1274, 1380, 1667, 1768
TseI GCWGC 7 cut(s) 374, 578, 1181, 1205, 1432, 1622, 1657
TspGWI ACGGA 2 cut(s) 147, 626
TspRI CASTG 6 cut(s) 573, 976, 1274, 1380, 1667, 1768
Tth111I GACNNNGTC 1 cut(s) 1514
VpaK11BI GGWCC 1 cut(s) 1909
XapI RAATTY 5 cut(s) 341, 927, 1031, 1583, 1596
XceI RCATGY 3 cut(s) 80, 997, 1358
XcmI CCANNNNNNNNNTGG 1 cut(s) 1934
XhoI CTCGAG 1 cut(s) 1150
XspI CTAG 3 cut(s) 477, 1379, 1802
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.