AMSH-like ubiquitin thioesterase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G10600 AT1G10600 AT1G10600 |
| fragaria_vesca | FvH4_4g34380 FvH4_4g34380 FvH4_4g34380 FvH4_4g34380 FvH4_4g34380 FvH4_4g34380 FvH4_4g34380 FvH4_4g34380 FvH4_4g34380 FvH4_4g34380 |
| malus_domestica | MD16G1093400.v1.1 |
| prunus_persica | Prupe.1G253200_v2.0.a1 Prupe.1G253200_v2.0.a1 Prupe.1G253200_v2.0.a1 Prupe.1G253200_v2.0.a1 Prupe.1G253200_v2.0.a1 Prupe.1G253200_v2.0.a1 Prupe.1G253200_v2.0.a1 Prupe.1G253200_v2.0.a1 Prupe.1G253200_v2.0.a1 Prupe.1G253200_v2.0.a1 Prupe.1G253200_v2.0.a1 Prupe.1G253200_v2.0.a1 Prupe.1G253200_v2.0.a1 Prupe.1G253200_v2.0.a1 Prupe.1G253200_v2.0.a1 Prupe.1G253200_v2.0.a1 |
| pyrus_communis | pycom16g07940 |
| rosa_chinensis | RchiOBHm_Chr4g0443791 |
| rosa_laevigata | RLG00000005888 |
| rosa_multiflora | Rmu_sc0005632.1_g000002 |
| rosa_roxburghii | Rroxscaffold_5G00384370 |
| rosa_rugosa | Rorug04G0347300 Rorug04G0347400 Rorug04G0347500 Rorug04G0347600 Rorug04G0347600 |
| rosa_samantha | Rh4BG418500 Rh4DG413800 |
| rosa_wichuraiana | Rw4G035010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 85 |
| Acc36I | ACCTGC | 1 cut(s) | 85 |
| AccB1I | GGYRCC | 2 cut(s) | 73, 148 |
| AccII | CGCG | 1 cut(s) | 138 |
| AciI | CCGC | 1 cut(s) | 100 |
| AcsI | RAATTY | 1 cut(s) | 230 |
| AfaI | GTAC | 1 cut(s) | 35 |
| AgsI | TTSAA | 1 cut(s) | 10 |
| AluBI | AGCT | 1 cut(s) | 200 |
| AluI | AGCT | 1 cut(s) | 200 |
| Alw21I | GWGCWC | 1 cut(s) | 225 |
| AoxI | GGCC | 1 cut(s) | 158 |
| ApeKI | GCWGC | 2 cut(s) | 200, 203 |
| ApoI | RAATTY | 1 cut(s) | 230 |
| AspLEI | GCGC | 1 cut(s) | 138 |
| AsuHPI | GGTGA | 2 cut(s) | 89, 206 |
| BaeGI | GKGCMC | 1 cut(s) | 76 |
| BanI | GGYRCC | 2 cut(s) | 73, 148 |
| Bbv12I | GWGCWC | 1 cut(s) | 225 |
| BbvI | GCAGC | 2 cut(s) | 187, 190 |
| BccI | CCATC | 2 cut(s) | 102, 185 |
| BfmI | CTRYAG | 1 cut(s) | 45 |
| BfuAI | ACCTGC | 1 cut(s) | 85 |
| BisI | GCNGC | 2 cut(s) | 201, 204 |
| BlsI | GCNGC | 2 cut(s) | 202, 205 |
| BmcAI | AGTACT | 1 cut(s) | 35 |
| BmiI | GGNNCC | 3 cut(s) | 57, 75, 150 |
| BmsI | GCATC | 1 cut(s) | 50 |
| BsaJI | CCNNGG | 1 cut(s) | 152 |
| Bse1I | ACTGG | 1 cut(s) | 31 |
| Bse3DI | GCAATG | 1 cut(s) | 133 |
| BseDI | CCNNGG | 1 cut(s) | 152 |
| BseMI | GCAATG | 1 cut(s) | 133 |
| BseNI | ACTGG | 1 cut(s) | 31 |
| BseRI | GAGGAG | 2 cut(s) | 146, 169 |
| BseSI | GKGCMC | 1 cut(s) | 76 |
| BseXI | GCAGC | 2 cut(s) | 187, 190 |
| Bsh1236I | CGCG | 1 cut(s) | 138 |
| BshFI | GGCC | 1 cut(s) | 160 |
| BshNI | GGYRCC | 2 cut(s) | 73, 148 |
| BsiHKAI | GWGCWC | 1 cut(s) | 225 |
| BsnI | GGCC | 1 cut(s) | 160 |
| Bsp1286I | GDGCHC | 2 cut(s) | 76, 225 |
| BspACI | CCGC | 1 cut(s) | 100 |
| BspANI | GGCC | 1 cut(s) | 160 |
| BspFNI | CGCG | 1 cut(s) | 138 |
| BspLI | GGNNCC | 3 cut(s) | 57, 75, 150 |
| BspMAI | CTGCAG | 1 cut(s) | 49 |
| BspMI | ACCTGC | 1 cut(s) | 85 |
| BspT107I | GGYRCC | 2 cut(s) | 73, 148 |
| BsrDI | GCAATG | 1 cut(s) | 133 |
| BsrI | ACTGG | 1 cut(s) | 31 |
| BssECI | CCNNGG | 1 cut(s) | 152 |
| Bst4CI | ACNGT | 1 cut(s) | 169 |
| BstFNI | CGCG | 1 cut(s) | 138 |
| BstHHI | GCGC | 1 cut(s) | 138 |
| BstSFI | CTRYAG | 1 cut(s) | 45 |
| BstSLI | GKGCMC | 1 cut(s) | 76 |
| BstUI | CGCG | 1 cut(s) | 138 |
| BstV1I | GCAGC | 2 cut(s) | 187, 190 |
| BsuRI | GGCC | 1 cut(s) | 160 |
| BveI | ACCTGC | 1 cut(s) | 85 |
| CfoI | GCGC | 1 cut(s) | 138 |
| CseI | GACGC | 1 cut(s) | 181 |
| Csp6I | GTAC | 1 cut(s) | 34 |
| CviAII | CATG | 2 cut(s) | 113, 253 |
| CviJI | RGCY | 2 cut(s) | 160, 200 |
| CviKI_1 | RGCY | 2 cut(s) | 160, 200 |
| CviQI | GTAC | 1 cut(s) | 34 |
| FaeI | CATG | 2 cut(s) | 116, 256 |
| FaiI | YATR | 4 cut(s) | 62, 114, 180, 254 |
| FatI | CATG | 2 cut(s) | 112, 252 |
| Fnu4HI | GCNGC | 2 cut(s) | 201, 204 |
| Fsp4HI | GCNGC | 2 cut(s) | 201, 204 |
| GlaI | GCGC | 1 cut(s) | 137 |
| GluI | GCNGC | 2 cut(s) | 201, 204 |
| HaeIII | GGCC | 1 cut(s) | 160 |
| HgaI | GACGC | 1 cut(s) | 181 |
| HhaI | GCGC | 1 cut(s) | 138 |
| Hin1II | CATG | 2 cut(s) | 116, 256 |
| Hin6I | GCGC | 1 cut(s) | 136 |
| HinP1I | GCGC | 1 cut(s) | 136 |
| HphI | GGTGA | 2 cut(s) | 89, 206 |
| Hpy188I | TCNGA | 1 cut(s) | 259 |
| Hpy188III | TCNNGA | 2 cut(s) | 53, 235 |
| HpyAV | CCTTC | 1 cut(s) | 16 |
| HpyCH4III | ACNGT | 1 cut(s) | 169 |
| HpyCH4V | TGCA | 2 cut(s) | 41, 47 |
| Hsp92II | CATG | 2 cut(s) | 116, 256 |
| HspAI | GCGC | 1 cut(s) | 136 |
| LmnI | GCTCC | 1 cut(s) | 133 |
| LpnPI | CCDG | 4 cut(s) | 38, 44, 90, 248 |
| Lsp1109I | GCAGC | 2 cut(s) | 187, 190 |
| LweI | GCATC | 1 cut(s) | 50 |
| MaeIII | GTNAC | 1 cut(s) | 169 |
| MboII | GAAGA | 1 cut(s) | 194 |
| MhlI | GDGCHC | 2 cut(s) | 76, 225 |
| MluCI | AATT | 2 cut(s) | 214, 230 |
| MnlI | CCTC | 5 cut(s) | 124, 139, 147, 150, 234 |
| MvnI | CGCG | 1 cut(s) | 138 |
| NlaIII | CATG | 2 cut(s) | 116, 256 |
| NlaIV | GGNNCC | 3 cut(s) | 57, 75, 150 |
| NmuCI | GTSAC | 1 cut(s) | 169 |
| PaqCI | CACCTGC | 1 cut(s) | 85 |
| PflFI | GACNNNGTC | 1 cut(s) | 253 |
| PkrI | GCNGC | 2 cut(s) | 202, 205 |
| PspN4I | GGNNCC | 3 cut(s) | 57, 75, 150 |
| PstI | CTGCAG | 1 cut(s) | 49 |
| PsyI | GACNNNGTC | 1 cut(s) | 253 |
| RsaI | GTAC | 1 cut(s) | 35 |
| RsaNI | GTAC | 1 cut(s) | 34 |
| SatI | GCNGC | 2 cut(s) | 201, 204 |
| ScaI | AGTACT | 1 cut(s) | 35 |
| SduI | GDGCHC | 2 cut(s) | 76, 225 |
| SetI | ASST | 4 cut(s) | 61, 79, 122, 202 |
| SfaNI | GCATC | 1 cut(s) | 50 |
| SfcI | CTRYAG | 1 cut(s) | 45 |
| Sse9I | AATT | 2 cut(s) | 214, 230 |
| SsiI | CCGC | 1 cut(s) | 100 |
| TaaI | ACNGT | 1 cut(s) | 169 |
| TaqI | TCGA | 2 cut(s) | 144, 219 |
| TasI | AATT | 2 cut(s) | 214, 230 |
| TatI | WGTACW | 1 cut(s) | 33 |
| TseFI | GTSAC | 1 cut(s) | 169 |
| TseI | GCWGC | 2 cut(s) | 200, 203 |
| Tsp45I | GTSAC | 1 cut(s) | 169 |
| TspDTI | ATGAA | 2 cut(s) | 6, 195 |
| Tth111I | GACNNNGTC | 1 cut(s) | 253 |
| XapI | RAATTY | 1 cut(s) | 230 |
| ZrmI | AGTACT | 1 cut(s) | 35 |